Citrus Sinensis ID: 005864
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 673 | 2.2.26 [Sep-21-2011] | |||||||
| Q8VZG8 | 1045 | Probable LRR receptor-lik | yes | no | 0.988 | 0.636 | 0.504 | 0.0 | |
| Q9LP24 | 1120 | Probable leucine-rich rep | no | no | 0.986 | 0.592 | 0.502 | 0.0 | |
| C0LGQ5 | 1249 | LRR receptor-like serine/ | no | no | 0.983 | 0.530 | 0.356 | 1e-110 | |
| Q9SHI2 | 1101 | Leucine-rich repeat recep | no | no | 0.991 | 0.605 | 0.344 | 1e-107 | |
| Q9LVP0 | 1102 | Probable leucine-rich rep | no | no | 0.985 | 0.601 | 0.370 | 1e-106 | |
| C0LGV1 | 1135 | LRR receptor-like serine/ | no | no | 0.989 | 0.586 | 0.341 | 1e-105 | |
| Q9M2Z1 | 1002 | Leucine-rich repeat recep | no | no | 0.968 | 0.650 | 0.346 | 1e-104 | |
| O49318 | 1124 | Probable leucine-rich rep | no | no | 0.994 | 0.595 | 0.353 | 1e-104 | |
| Q9FIZ3 | 1252 | LRR receptor-like serine/ | no | no | 0.977 | 0.525 | 0.346 | 1e-103 | |
| O49545 | 1003 | Leucine-rich repeat recep | no | no | 0.968 | 0.650 | 0.344 | 1e-103 |
| >sp|Q8VZG8|Y4885_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/674 (50%), Positives = 456/674 (67%), Gaps = 9/674 (1%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N LSG IPP + N T L L L +N+ +G +P I +L NL +D+N G +P+SLR
Sbjct: 368 NQLSGPIPPGIANSTELTVLQLDTNNFTGFLPDTICRGGKLENLTLDDNHFEGPVPKSLR 427
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
+ SL RV + N +G+ISE FG+YP L F+D+S+NNF+G++ ++W + Q+L S
Sbjct: 428 DCKSLIRVRFKGNSFSGDISEAFGVYPTLNFIDLSNNNFHGQLSANWEQSQKLVAFILSN 487
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N+ITG+IPPEI + QL +LD S N+I GE+P + N+ ++ L LNGN+LSG +P +
Sbjct: 488 NSITGAIPPEIWNMTQLSQLDLSSNRITGELPESISNINRISKLQLNGNRLSGKIPSGIR 547
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
L+ LEYLDLS+N+ S IP TL NL +++Y+NLS N + P L KL QL LDLS+
Sbjct: 548 LLTNLEYLDLSSNRFSSEIPPTLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSY 607
Query: 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTG 301
N L GEI Q +L++LE+L++SHNNLSG IP F+ M L+ +D+S+N L G IP++
Sbjct: 608 NQLDGEISSQFRSLQNLERLDLSHNNLSGQIPPSFKDMLALTHVDVSHNNLQGPIPDNAA 667
Query: 302 FQYDPIQALRGNRGLCGDV---EGFQSCKAFVSQK-HVFENKWFLIIIPILGVFALLFFV 357
F+ P A GN+ LCG V +G + C S+K H N I++PI+G +L
Sbjct: 668 FRNAPPDAFEGNKDLCGSVNTTQGLKPCSITSSKKSHKDRNLIIYILVPIIGAIIILSVC 727
Query: 358 IGIIFGRTKRTSK-ENKGSCENHRGLLSILTFEGKIVYEEIIRATKNFDAEQCIGIGGQA 416
GI KRT + E E+ LSI +F+GK+ Y+EII+AT FD + IG GG
Sbjct: 728 AGIFICFRKRTKQIEEHTDSESGGETLSIFSFDGKVRYQEIIKATGEFDPKYLIGTGGHG 787
Query: 417 SVYRGELPSGEVVAVKKFHSLLLSEIS---VQREFLNEIKALTEIRHRNIVKFYGFCSHP 473
VY+ +LP+ ++AVKK + S IS ++EFLNEI+ALTEIRHRN+VK +GFCSH
Sbjct: 788 KVYKAKLPNA-IMAVKKLNETTDSSISNPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHR 846
Query: 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDI 533
R++FLVYE +ERGSL ++L ND K+ W R NV+K VA+ALSYMHHD P IVHRDI
Sbjct: 847 RNTFLVYEYMERGSLRKVLENDDEAKKLDWGKRINVVKGVAHALSYMHHDRSPAIVHRDI 906
Query: 534 SSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSF 593
SS N+LL +YEA++SDFG AK LKP SSNW+ AGT+GYVAPELAY MKVTEKCDVYSF
Sbjct: 907 SSGNILLGEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSF 966
Query: 594 GVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLC 653
GVL LEVIKG+HP D +S LSSS + LSL I D RLP P+ I+++++ IL+VALLC
Sbjct: 967 GVLTLEVIKGEHPGDLVSTLSSSPPDATLSLKSISDHRLPEPTPEIKEEVLEILKVALLC 1026
Query: 654 LEESPESRPTMQTV 667
L P++RPTM ++
Sbjct: 1027 LHSDPQARPTMLSI 1040
|
Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9LP24|Y1571_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/674 (50%), Positives = 449/674 (66%), Gaps = 10/674 (1%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
+NHLSGAIPP V N ++L L L +N+ +G P + +L N+ +D N L G IP+SL
Sbjct: 447 VNHLSGAIPPGVANSSHLTTLILDTNNFTGFFPETVCKGRKLQNISLDYNHLEGPIPKSL 506
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFS 120
R+ SL R N TG+I E FGIYP+L F+D SHN F+GEI S+W K +LG L S
Sbjct: 507 RDCKSLIRARFLGNKFTGDIFEAFGIYPDLNFIDFSHNKFHGEISSNWEKSPKLGALIMS 566
Query: 121 MNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVL 180
NNITG+IP EI + QL +LD S N + GE+P +GNL +L+ L LNGN+LSG +P L
Sbjct: 567 NNNITGAIPTEIWNMTQLVELDLSTNNLFGELPEAIGNLTNLSRLRLNGNQLSGRVPAGL 626
Query: 181 GSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLS 240
L+ LE LDLS+N S IP+T + LK+H +NLS N+F P L KL QL++LDLS
Sbjct: 627 SFLTNLESLDLSSNNFSSEIPQTFDSFLKLHDMNLSRNKFDGSIP-RLSKLTQLTQLDLS 685
Query: 241 HNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNST 300
HN L GEIP Q+ +L+SL+KL++SHNNLSGLIP+ FEGM L+ +DIS N+L G +P++
Sbjct: 686 HNQLDGEIPSQLSSLQSLDKLDLSHNNLSGLIPTTFEGMIALTNVDISNNKLEGPLPDTP 745
Query: 301 GFQYDPIQALRGNRGLCGDV--EGFQSCKAFVSQKHVFENKWFLIIIPILGVFALLFFVI 358
F+ AL N GLC ++ + + C+ K N I++PILGV +L
Sbjct: 746 TFRKATADALEENIGLCSNIPKQRLKPCRELKKPKKN-GNLVVWILVPILGVLVILSICA 804
Query: 359 GIIFGRTKRTSKENKGSCENHRGL-LSILTFEGKIVYEEIIRATKNFDAEQCIGIGGQAS 417
++ +N + + G +SI + +GK Y++II +T FD IG GG +
Sbjct: 805 NTFTYCIRKRKLQNGRNTDPETGENMSIFSVDGKFKYQDIIESTNEFDPTHLIGTGGYSK 864
Query: 418 VYRGELPSGEVVAVKKFHSLLLSEIS---VQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474
VYR L ++AVK+ H + EIS V++EFLNE+KALTEIRHRN+VK +GFCSH R
Sbjct: 865 VYRANL-QDTIIAVKRLHDTIDEEISKPVVKQEFLNEVKALTEIRHRNVVKLFGFCSHRR 923
Query: 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDIS 534
H+FL+YE +E+GSL ++L+ND K +W R NV+K VA+ALSYMHHD PIVHRDIS
Sbjct: 924 HTFLIYEYMEKGSLNKLLANDEEAKRLTWTKRINVVKGVAHALSYMHHDRITPIVHRDIS 983
Query: 535 SKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFG 594
S N+LL ++Y A++SDFG AK LK SSNW+ AGT+GYVAPE AYTMKVTEKCDVYSFG
Sbjct: 984 SGNILLDNDYTAKISDFGTAKLLKTDSSNWSAVAGTYGYVAPEFAYTMKVTEKCDVYSFG 1043
Query: 595 VLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCL 654
VL LE+I GKHP D +S LSSS LSL I D R+ P ++KL+ ++E+ALLCL
Sbjct: 1044 VLILELIIGKHPGDLVSSLSSSPGEA-LSLRSISDERVLEPRGQNREKLLKMVEMALLCL 1102
Query: 655 EESPESRPTMQTVC 668
+ +PESRPTM ++
Sbjct: 1103 QANPESRPTMLSIS 1116
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1 OS=Arabidopsis thaliana GN=GSO1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 260/730 (35%), Positives = 376/730 (51%), Gaps = 68/730 (9%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFG------- 54
N LSG+IP S G L+ L LY+NSL G++P + +L LT + + +N+L G
Sbjct: 514 NQLSGSIPSSFGFLKGLEQLMLYNNSLQGNLPDSLISLRNLTRINLSHNRLNGTIHPLCG 573
Query: 55 ----------------QIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHN 98
+IP L N +L+R+ L +N LTG I G L+ LD+S N
Sbjct: 574 SSSYLSFDVTNNGFEDEIPLELGNSQNLDRLRLGKNQLTGKIPWTLGKIRELSLLDMSSN 633
Query: 99 NFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGN 158
G I C++L ++ + N ++G IPP +GKL QL +L S NQ V +P EL N
Sbjct: 634 ALTGTIPLQLVLCKKLTHIDLNNNFLSGPIPPWLGKLSQLGELKLSSNQFVESLPTELFN 693
Query: 159 LKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNN 218
L L L+GN L+G++P+ +G+L L L+L N+ SGS+P+ +G L K++ L LS N
Sbjct: 694 CTKLLVLSLDGNSLNGSIPQEIGNLGALNVLNLDKNQFSGSLPQAMGKLSKLYELRLSRN 753
Query: 219 QFRKEFPVELEKLVQL-SELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFE 277
E PVE+ +L L S LDLS+N G+IP I L LE L++SHN L+G +P
Sbjct: 754 SLTGEIPVEIGQLQDLQSALDLSYNNFTGDIPSTIGTLSKLETLDLSHNQLTGEVPGSVG 813
Query: 278 GMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCGDVEGFQSCKAFVS--QKHV 335
M L +++S+N L G + F P + GN GLCG C S ++
Sbjct: 814 DMKSLGYLNVSFNNLGGKLKKQ--FSRWPADSFLGNTGLCGSP--LSRCNRVRSNNKQQG 869
Query: 336 FENKWFLII--IPILGVFALLFFVIGIIFG-RTKRTSKENKGSC----------ENHRGL 382
+ +II I L L+ VI + F R K GS H+ L
Sbjct: 870 LSARSVVIISAISALTAIGLMILVIALFFKQRHDFFKKVGHGSTAYTSSSSSSQATHKPL 929
Query: 383 LSILTFEGKIVYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEI 442
+ I +E+I+ AT N E IG GG VY+ EL +GE VAVKK L ++
Sbjct: 930 FRNGASKSDIRWEDIMEATHNLSEEFMIGSGGSGKVYKAELENGETVAVKKI--LWKDDL 987
Query: 443 SVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH--SFLVYECLERGSLAEILSNDGSIKE 500
+ F E+K L IRHR++VK G+CS + L+YE ++ GS+ + L D + E
Sbjct: 988 MSNKSFSREVKTLGRIRHRHLVKLMGYCSSKSEGLNLLIYEYMKNGSIWDWLHEDKPVLE 1047
Query: 501 -----FSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555
W R + +A + Y+HHDC PPIVHRDI S NVLL S EA + DFG+AK
Sbjct: 1048 KKKKLLDWEARLRIAVGLAQGVEYLHHDCVPPIVHRDIKSSNVLLDSNMEAHLGDFGLAK 1107
Query: 556 FLKPGSSNWTE----FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPR---- 607
L T+ FA ++GY+APE AY++K TEK DVYS G++ +E++ GK P
Sbjct: 1108 VLTENCDTNTDSNTWFACSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTDSVF 1167
Query: 608 ----DFISLLSSSSSNMNLSLNEILDPRLP--LPSRNIQDKLISILEVALLCLEESPESR 661
D + + + + ++++DP+L LP +D +LE+AL C + SP+ R
Sbjct: 1168 GAEMDMVRWVETHLEVAGSARDKLIDPKLKPLLPFE--EDAACQVLEIALQCTKTSPQER 1225
Query: 662 PTMQTVCQLL 671
P+ + C L
Sbjct: 1226 PSSRQACDSL 1235
|
Together with GSO2, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9SHI2|Y1723_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana GN=At1g17230 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 263/763 (34%), Positives = 372/763 (48%), Gaps = 96/763 (12%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N L+G IP G+ NLK L+L+ N L G +P E+G L L L++ N+L G IP+ L+
Sbjct: 317 NQLTGFIPKEFGHILNLKLLHLFENILLGPIPRELGELTLLEKLDLSINRLNGTIPQELQ 376
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGK----------- 110
L L + L N L G I + G Y N + LD+S N+ G I + + +
Sbjct: 377 FLPYLVDLQLFDNQLEGKIPPLIGFYSNFSVLDMSANSLSGPIPAHFCRFQTLILLSLGS 436
Query: 111 -------------CQQLGTLNFSMNNITGSIPPEI------------------------G 133
C+ L L N +TGS+P E+ G
Sbjct: 437 NKLSGNIPRDLKTCKSLTKLMLGDNQLTGSLPIELFNLQNLTALELHQNWLSGNISADLG 496
Query: 134 KLYQLHKLDFSLNQIVGEIPIELGNLK------------------------SLNYLVLNG 169
KL L +L + N GEIP E+GNL ++ L L+G
Sbjct: 497 KLKNLERLRLANNNFTGEIPPEIGNLTKIVGFNISSNQLTGHIPKELGSCVTIQRLDLSG 556
Query: 170 NKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELE 229
NK SG + + LG L LE L LS N+L+G IP + G+L ++ L L N + PVEL
Sbjct: 557 NKFSGYIAQELGQLVYLEILRLSDNRLTGEIPHSFGDLTRLMELQLGGNLLSENIPVELG 616
Query: 230 KLVQLS-ELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDIS 288
KL L L++SHN L G IP + NL+ LE L ++ N LSG IP+ + L +IS
Sbjct: 617 KLTSLQISLNISHNNLSGTIPDSLGNLQMLEILYLNDNKLSGEIPASIGNLMSLLICNIS 676
Query: 289 YNELLGLIPNSTGFQYDPIQALRGNRGLCGDVEGFQSCKAFVSQKHVFEN---------K 339
N L+G +P++ FQ GN GLC C+ V N K
Sbjct: 677 NNNLVGTVPDTAVFQRMDSSNFAGNHGLCNSQR--SHCQPLVPHSDSKLNWLINGSQRQK 734
Query: 340 WFLIIIPILGVFALLFFVIGIIFGRTKRTSKENKGSCENHRGLLSILTFEGK-IVYEEII 398
I ++G L+ F +G+ + +R + ++ F K Y+ ++
Sbjct: 735 ILTITCIVIGSVFLITF-LGLCWTIKRREPAFVALEDQTKPDVMDSYYFPKKGFTYQGLV 793
Query: 399 RATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI 458
AT+NF + +G G +VY+ E+ GEV+AVKK +S S F EI L +I
Sbjct: 794 DATRNFSEDVVLGRGACGTVYKAEMSGGEVIAVKKLNS-RGEGASSDNSFRAEISTLGKI 852
Query: 459 RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALS 518
RHRNIVK YGFC H + L+YE + +GSL E L W R + A L
Sbjct: 853 RHRNIVKLYGFCYHQNSNLLLYEYMSKGSLGEQLQRGEKNCLLDWNARYRIALGAAEGLC 912
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG-SSNWTEFAGTFGYVAPE 577
Y+HHDC P IVHRDI S N+LL ++A V DFG+AK + S + + AG++GY+APE
Sbjct: 913 YLHHDCRPQIVHRDIKSNNILLDERFQAHVGDFGLAKLIDLSYSKSMSAVAGSYGYIAPE 972
Query: 578 LAYTMKVTEKCDVYSFGVLALEVIKGKHP-------RDFISLLSSSSSNMNLSLNEILDP 630
AYTMKVTEKCD+YSFGV+ LE+I GK P D ++ + S NM ++ E+ D
Sbjct: 973 YAYTMKVTEKCDIYSFGVVLLELITGKPPVQPLEQGGDLVNWVRRSIRNMIPTI-EMFDA 1031
Query: 631 RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673
RL + ++ +L++AL C SP SRPTM+ V ++ +
Sbjct: 1032 RLDTNDKRTVHEMSLVLKIALFCTSNSPASRPTMREVVAMITE 1074
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9LVP0|Y5639_ARATH Probable leucine-rich repeat receptor-like protein kinase At5g63930 OS=Arabidopsis thaliana GN=At5g63930 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 385 bits (990), Expect = e-106, Method: Compositional matrix adjust.
Identities = 267/721 (37%), Positives = 385/721 (53%), Gaps = 58/721 (8%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLY---LYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIP 57
+N L+G IP F L+GL+ L+ NSLSG++P ++G L L++ +N L G+IP
Sbjct: 370 INALTGPIPLG---FQYLRGLFMLQLFQNSLSGTIPPKLGWYSDLWVLDMSDNHLSGRIP 426
Query: 58 RSLRNLASLNRVHLEQNHLTGNI-----------------SEVFGIYP-------NLTFL 93
L +++ ++L N+L+GNI + + G +P N+T +
Sbjct: 427 SYLCLHSNMIILNLGTNNLSGNIPTGITTCKTLVQLRLARNNLVGRFPSNLCKQVNVTAI 486
Query: 94 DISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIP 153
++ N F G I G C L L + N TG +P EIG L QL L+ S N++ GE+P
Sbjct: 487 ELGQNRFRGSIPREVGNCSALQRLQLADNGFTGELPREIGMLSQLGTLNISSNKLTGEVP 546
Query: 154 IELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYL 213
E+ N K L L + N SG LP +GSL +LE L LS N LSG+IP LGNL ++ L
Sbjct: 547 SEIFNCKMLQRLDMCCNNFSGTLPSEVGSLYQLELLKLSNNNLSGTIPVALGNLSRLTEL 606
Query: 214 NLSNNQFRKEFPVELEKLVQLS-ELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLI 272
+ N F P EL L L L+LS+N L GEIPP++ NL LE L +++NNLSG I
Sbjct: 607 QMGGNLFNGSIPRELGSLTGLQIALNLSYNKLTGEIPPELSNLVMLEFLLLNNNNLSGEI 666
Query: 273 PSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCG-------DVEGFQS 325
PS F + L + SYN L G IP + + + GN GLCG + F
Sbjct: 667 PSSFANLSSLLGYNFSYNSLTGPIPL---LRNISMSSFIGNEGLCGPPLNQCIQTQPFAP 723
Query: 326 CKAFVSQKHVFENKWFLIIIPIL-GVFALLFFVIGIIFGRTKRTSKENKGSCENHRGLLS 384
++ + +K I ++ GV +L +I + R RT + + L
Sbjct: 724 SQSTGKPGGMRSSKIIAITAAVIGGVSLMLIALIVYLMRRPVRTVASSAQDGQPSEMSLD 783
Query: 385 ILTFEGK--IVYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLL--S 440
I F K +++++ AT NFD +G G +VY+ LP+G +AVKK S +
Sbjct: 784 IY-FPPKEGFTFQDLVAATDNFDESFVVGRGACGTVYKAVLPAGYTLAVKKLASNHEGGN 842
Query: 441 EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKE 500
+V F EI L IRHRNIVK +GFC+H + L+YE + +GSL EIL +
Sbjct: 843 NNNVDNSFRAEILTLGNIRHRNIVKLHGFCNHQGSNLLLYEYMPKGSLGEILHDPSC--N 900
Query: 501 FSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK-P 559
W R + A L+Y+HHDC P I HRDI S N+LL ++EA V DFG+AK + P
Sbjct: 901 LDWSKRFKIALGAAQGLAYLHHDCKPRIFHRDIKSNNILLDDKFEAHVGDFGLAKVIDMP 960
Query: 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP-------RDFISL 612
S + + AG++GY+APE AYTMKVTEK D+YS+GV+ LE++ GK P D ++
Sbjct: 961 HSKSMSAIAGSYGYIAPEYAYTMKVTEKSDIYSYGVVLLELLTGKAPVQPIDQGGDVVNW 1020
Query: 613 LSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672
+ S LS + +LD RL L I ++++L++ALLC SP +RP+M+ V +L
Sbjct: 1021 VRSYIRRDALS-SGVLDARLTLEDERIVSHMLTVLKIALLCTSVSPVARPSMRQVVLMLI 1079
Query: 673 K 673
+
Sbjct: 1080 E 1080
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|C0LGV1|RCH1_ARATH LRR receptor-like serine/threonine-protein kinase RCH1 OS=Arabidopsis thaliana GN=RCH1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 252/737 (34%), Positives = 372/737 (50%), Gaps = 71/737 (9%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
MN+ SG IP S GN +NL+ L L SN+++GS+P + N +L +ID NQ+ G IP +
Sbjct: 332 MNYFSGTIPKSFGNLSNLQELMLSSNNITGSIPSILSNCTKLVQFQIDANQISGLIPPEI 391
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSW------------ 108
L LN QN L GNI + NL LD+S N G + +
Sbjct: 392 GLLKELNIFLGWQNKLEGNIPDELAGCQNLQALDLSQNYLTGSLPAGLFQLRNLTKLLLI 451
Query: 109 ------------GKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIEL 156
G C L L N ITG IP IG L L LD S N + G +P+E+
Sbjct: 452 SNAISGVIPLEIGNCTSLVRLRLVNNRITGEIPKGIGFLQNLSFLDLSENNLSGPVPLEI 511
Query: 157 GNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLS 216
N + L L L+ N L G LP L SL++L+ LD+S+N L+G IP++LG+L+ ++ L LS
Sbjct: 512 SNCRQLQMLNLSNNTLQGYLPLSLSSLTKLQVLDVSSNDLTGKIPDSLGHLISLNRLILS 571
Query: 217 NNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLE-KLNVSHNNLSGLIP-- 273
N F E P L L LDLS N + G IP ++ +++ L+ LN+S N+L G IP
Sbjct: 572 KNSFNGEIPSSLGHCTNLQLLDLSSNNISGTIPEELFDIQDLDIALNLSWNSLDGFIPER 631
Query: 274 ---------------------SCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRG 312
S G+ L ++IS+N G +P+S F+ + G
Sbjct: 632 ISALNRLSVLDISHNMLSGDLSALSGLENLVSLNISHNRFSGYLPDSKVFRQLIGAEMEG 691
Query: 313 NRGLCGDVEGFQSC-----KAFVSQKHVFENKWFLIIIPILGVFALLFFVIGIIFGRTKR 367
N GLC +GF+SC +Q+ V ++ + I ++ V A+L + + R K+
Sbjct: 692 NNGLCS--KGFRSCFVSNSSQLTTQRGVHSHRLRIAIGLLISVTAVLAVLGVLAVIRAKQ 749
Query: 368 TSKENKGSCENHRGLLSILTFEGKIVYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGE 427
+++ S E L + + + + K IG G VY+ E+P+ E
Sbjct: 750 MIRDDNDS-ETGENLWTWQFTPFQKLNFTVEHVLKCLVEGNVIGKGCSGIVYKAEMPNRE 808
Query: 428 VVAVKKFHSLLLSEIS-------VQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480
V+AVKK + + ++ V+ F E+K L IRH+NIV+F G C + L+Y
Sbjct: 809 VIAVKKLWPVTVPNLNEKTKSSGVRDSFSAEVKTLGSIRHKNIVRFLGCCWNKNTRLLMY 868
Query: 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL 540
+ + GSL +L + W VR +I A L+Y+HHDC PPIVHRDI + N+L+
Sbjct: 869 DYMSNGSLGSLLHERSGVCSLGWEVRYKIILGAAQGLAYLHHDCVPPIVHRDIKANNILI 928
Query: 541 SSEYEARVSDFGIAKFLKPG----SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVL 596
++E + DFG+AK + G SSN AG++GY+APE Y+MK+TEK DVYS+GV+
Sbjct: 929 GPDFEPYIGDFGLAKLVDDGDFARSSN--TIAGSYGYIAPEYGYSMKITEKSDVYSYGVV 986
Query: 597 ALEVIKGKHPRD--FISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCL 654
LEV+ GK P D L + +++D L + ++++ L VALLC+
Sbjct: 987 VLEVLTGKQPIDPTIPDGLHIVDWVKKIRDIQVIDQGLQARPESEVEEMMQTLGVALLCI 1046
Query: 655 EESPESRPTMQTVCQLL 671
PE RPTM+ V +L
Sbjct: 1047 NPIPEDRPTMKDVAAML 1063
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9M2Z1|BAME2_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2 OS=Arabidopsis thaliana GN=BAM2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust.
Identities = 253/731 (34%), Positives = 372/731 (50%), Gaps = 79/731 (10%)
Query: 4 LSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNL 63
L+G IPP +G L L+L N+ +G++ E+G + L ++++ NN G+IP S L
Sbjct: 251 LTGEIPPEIGKLQKLDTLFLQVNAFTGTITQELGLISSLKSMDLSNNMFTGEIPTSFSQL 310
Query: 64 ASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNN 123
+L ++L +N L G I E G P L L + NNF G I G+ +L L+ S N
Sbjct: 311 KNLTLLNLFRNKLYGAIPEFIGEMPELEVLQLWENNFTGSIPQKLGENGRLVILDLSSNK 370
Query: 124 ITGSIPP------------------------EIGKLYQLHKLDFSLNQIVGEIPIELGNL 159
+TG++PP +GK L ++ N + G IP EL L
Sbjct: 371 LTGTLPPNMCSGNRLMTLITLGNFLFGSIPDSLGKCESLTRIRMGENFLNGSIPKELFGL 430
Query: 160 KSLNYLVLNGNKLSGNLPRVLGSLS-ELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNN 218
L+ + L N L+G LP G +S +L + LS N+LSGS+P +GNL V L L N
Sbjct: 431 PKLSQVELQDNYLTGELPISGGGVSGDLGQISLSNNQLSGSLPAAIGNLSGVQKLLLDGN 490
Query: 219 QFRKEFPVELEKLVQLSELDLSHNF------------------------LGGEIPPQICN 254
+F P E+ +L QLS+LD SHN L G+IP ++
Sbjct: 491 KFSGSIPPEIGRLQQLSKLDFSHNLFSGRIAPEISRCKLLTFVDLSRNELSGDIPNELTG 550
Query: 255 LESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNR 314
++ L LN+S N+L G IP M L+ +D SYN L GL+P++ F Y + GN
Sbjct: 551 MKILNYLNLSRNHLVGSIPVTIASMQSLTSVDFSYNNLSGLVPSTGQFSYFNYTSFVGNS 610
Query: 315 GLCGDVEGFQSCKAFVSQKHV--FENKWFLIIIPILGVFALLFFVIGIIFGRTKRTSKEN 372
LCG G C Q HV L+++ L +++F ++ II R+ R + E
Sbjct: 611 HLCGPYLG--PCGKGTHQSHVKPLSATTKLLLVLGLLFCSMVFAIVAIIKARSLRNASEA 668
Query: 373 KGSCENHRGLLSILTFEG-KIVYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAV 431
K + F+ ++++ + K + IG GG VY+G +P G++VAV
Sbjct: 669 KA--------WRLTAFQRLDFTCDDVLDSLKE---DNIIGKGGAGIVYKGTMPKGDLVAV 717
Query: 432 KKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEI 491
K+ ++ S F EI+ L IRHR+IV+ GFCS+ + LVYE + GSL E+
Sbjct: 718 KRLATMSHGS-SHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEV 776
Query: 492 LSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551
L W R + A L Y+HHDC P IVHRD+ S N+LL S +EA V+DF
Sbjct: 777 LHGKKG-GHLHWNTRYKIALEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADF 835
Query: 552 GIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP--- 606
G+AKFL+ ++ + AG++GY+APE AYT+KV EK DVYSFGV+ LE+I GK P
Sbjct: 836 GLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGKKPVGE 895
Query: 607 ----RDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRP 662
D + + S + + + +++D RL S ++ + VALLC+EE RP
Sbjct: 896 FGDGVDIVQWVRSMTDSNKDCVLKVIDLRL---SSVPVHEVTHVFYVALLCVEEQAVERP 952
Query: 663 TMQTVCQLLCK 673
TM+ V Q+L +
Sbjct: 953 TMREVVQILTE 963
|
Necessary for male gametophyte development, as well as ovule specification and function. Involved in cell-cell communication process required during early anther development, and regulating cell division and differentiation to organize cell layers. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. May regulate the CLV1-dependent CLV3-mediated signaling in meristems maintenance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49318|Y2317_ARATH Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 256/724 (35%), Positives = 385/724 (53%), Gaps = 55/724 (7%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
+N L+G IPP N T+++ L L+ NSLSG +P +G L ++ NQL G+IP +
Sbjct: 382 INSLTGPIPPGFQNLTSMRQLQLFHNSLSGVIPQGLGLYSPLWVVDFSENQLSGKIPPFI 441
Query: 61 RNLASLNRVHLEQNHLTGNI-----------------SEVFGIYP-------NLTFLDIS 96
++L ++L N + GNI + + G +P NL+ +++
Sbjct: 442 CQQSNLILLNLGSNRIFGNIPPGVLRCKSLLQLRVVGNRLTGQFPTELCKLVNLSAIELD 501
Query: 97 HNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIEL 156
N F G + G CQ+L L+ + N + ++P EI KL L + S N + G IP E+
Sbjct: 502 QNRFSGPLPPEIGTCQKLQRLHLAANQFSSNLPNEISKLSNLVTFNVSSNSLTGPIPSEI 561
Query: 157 GNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLS 216
N K L L L+ N G+LP LGSL +LE L LS N+ SG+IP T+GNL + L +
Sbjct: 562 ANCKMLQRLDLSRNSFIGSLPPELGSLHQLEILRLSENRFSGNIPFTIGNLTHLTELQMG 621
Query: 217 NNQFRKEFPVELEKLVQLS-ELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSC 275
N F P +L L L ++LS+N GEIPP+I NL L L++++N+LSG IP+
Sbjct: 622 GNLFSGSIPPQLGLLSSLQIAMNLSYNDFSGEIPPEIGNLHLLMYLSLNNNHLSGEIPTT 681
Query: 276 FEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCGDVEGFQSCK-AFVSQKH 334
FE + L + SYN L G +P++ FQ + + GN+GLCG +SC + S H
Sbjct: 682 FENLSSLLGCNFSYNNLTGQLPHTQIFQNMTLTSFLGNKGLCGG--HLRSCDPSHSSWPH 739
Query: 335 V--------FENKWFLIIIPILGVFALLFFVIGIIFGRTKRTSKENKGSCENHRGLLSIL 386
+ + +I+ ++G +LL I + F R + S +
Sbjct: 740 ISSLKAGSARRGRIIIIVSSVIGGISLLLIAIVVHFLRNPVEPTAPYVHDKEPFFQESDI 799
Query: 387 TF--EGKIVYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFH----SLLLS 440
F + + ++I+ ATK F +G G +VY+ +PSG+ +AVKK +
Sbjct: 800 YFVPKERFTVKDILEATKGFHDSYIVGRGACGTVYKAVMPSGKTIAVKKLESNREGNNNN 859
Query: 441 EISVQREFLNEIKALTEIRHRNIVKFYGFCSH--PRHSFLVYECLERGSLAEILSNDGSI 498
+ F EI L +IRHRNIV+ Y FC H + L+YE + RGSL E+L + G
Sbjct: 860 SNNTDNSFRAEILTLGKIRHRNIVRLYSFCYHQGSNSNLLLYEYMSRGSLGELL-HGGKS 918
Query: 499 KEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558
W R + A L+Y+HHDC P I+HRDI S N+L+ +EA V DFG+AK +
Sbjct: 919 HSMDWPTRFAIALGAAEGLAYLHHDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVID 978
Query: 559 -PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP-------RDFI 610
P S + + AG++GY+APE AYTMKVTEKCD+YSFGV+ LE++ GK P D
Sbjct: 979 MPLSKSVSAVAGSYGYIAPEYAYTMKVTEKCDIYSFGVVLLELLTGKAPVQPLEQGGDLA 1038
Query: 611 SLLSSSSSNMNLSLNEILDPRL-PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
+ + + +L+ +EILDP L + I + +I++ ++A+LC + SP RPTM+ V
Sbjct: 1039 TWTRNHIRDHSLT-SEILDPYLTKVEDDVILNHMITVTKIAVLCTKSSPSDRPTMREVVL 1097
Query: 670 LLCK 673
+L +
Sbjct: 1098 MLIE 1101
|
Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9FIZ3|GSO2_ARATH LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust.
Identities = 253/730 (34%), Positives = 371/730 (50%), Gaps = 72/730 (9%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNL---------------- 45
N LSG+IP S G T L+ +Y+NSL G++P + NL LT +
Sbjct: 515 NQLSGSIPSSFGFLTALELFMIYNNSLQGNLPDSLINLKNLTRINFSSNKFNGSISPLCG 574
Query: 46 -------EIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHN 98
++ N G IP L +L+R+ L +N TG I FG L+ LDIS N
Sbjct: 575 SSSYLSFDVTENGFEGDIPLELGKSTNLDRLRLGKNQFTGRIPRTFGKISELSLLDISRN 634
Query: 99 NFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGN 158
+ G I G C++L ++ + N ++G IP +GKL L +L S N+ VG +P E+ +
Sbjct: 635 SLSGIIPVELGLCKKLTHIDLNNNYLSGVIPTWLGKLPLLGELKLSSNKFVGSLPTEIFS 694
Query: 159 LKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNN 218
L ++ L L+GN L+G++P+ +G+L L L+L N+LSG +P T+G L K+ L LS N
Sbjct: 695 LTNILTLFLDGNSLNGSIPQEIGNLQALNALNLEENQLSGPLPSTIGKLSKLFELRLSRN 754
Query: 219 QFRKEFPVELEKLVQL-SELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFE 277
E PVE+ +L L S LDLS+N G IP I L LE L++SHN L G +P
Sbjct: 755 ALTGEIPVEIGQLQDLQSALDLSYNNFTGRIPSTISTLPKLESLDLSHNQLVGEVPGQIG 814
Query: 278 GMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCGDVEGFQSC-KAFVSQKHVF 336
M L +++SYN L G + F A GN GLCG C +A +
Sbjct: 815 DMKSLGYLNLSYNNLEGKLKKQ--FSRWQADAFVGNAGLCGSP--LSHCNRAGSKNQRSL 870
Query: 337 ENKWFLIIIPI--LGVFALLFFVIGIIFGRTKRTSKENKGS--------CENHRGLLSIL 386
K +II I L AL+ VI + F + K+ +G + L S
Sbjct: 871 SPKTVVIISAISSLAAIALMVLVIILFFKQNHDLFKKVRGGNSAFSSNSSSSQAPLFSNG 930
Query: 387 TFEGKIVYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQR 446
+ I +++I+ AT + E IG GG VY+ EL +GE +AVKK L ++ +
Sbjct: 931 GAKSDIKWDDIMEATHYLNEEFMIGSGGSGKVYKAELKNGETIAVKKI--LWKDDLMSNK 988
Query: 447 EFLNEIKALTEIRHRNIVKFYGFCSHPRH--SFLVYECLERGSLAEILSNDGSIKE---F 501
F E+K L IRHR++VK G+CS + L+YE + GS+ + L + + K+
Sbjct: 989 SFNREVKTLGTIRHRHLVKLMGYCSSKADGLNLLIYEYMANGSVWDWLHANENTKKKEVL 1048
Query: 502 SWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561
W R + +A + Y+H+DC PPIVHRDI S NVLL S EA + DFG+AK L
Sbjct: 1049 GWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGDFGLAKILTGNY 1108
Query: 562 SNWTE----FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS 617
TE FAG++GY+APE AY++K TEK DVYS G++ +E++ GK P + +
Sbjct: 1109 DTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVTGKMPTE---AMFDEE 1165
Query: 618 SNMNLSLNEILDPRLPLPSRNIQDKLIS----------------ILEVALLCLEESPESR 661
++M + +LD P ++KLI +LE+AL C + P+ R
Sbjct: 1166 TDMVRWVETVLDTP---PGSEAREKLIDSELKSLLPCEEEAAYQVLEIALQCTKSYPQER 1222
Query: 662 PTMQTVCQLL 671
P+ + + L
Sbjct: 1223 PSSRQASEYL 1232
|
Together with GSO1, receptor-like serine/threonine-kinase required during the development of the epidermal surface in embryos and cotyledons. Involved in the nuclear division phase of megagametogenesis. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|O49545|BAME1_ARATH Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 OS=Arabidopsis thaliana GN=BAM1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 253/735 (34%), Positives = 370/735 (50%), Gaps = 83/735 (11%)
Query: 4 LSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNL 63
L+G IPP +G L L+L N SG + E+G L L ++++ NN G+IP S L
Sbjct: 251 LTGEIPPEIGKLQKLDTLFLQVNVFSGPLTWELGTLSSLKSMDLSNNMFTGEIPASFAEL 310
Query: 64 ASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNN 123
+L ++L +N L G I E G P L L + NNF G I G+ +L ++ S N
Sbjct: 311 KNLTLLNLFRNKLHGEIPEFIGDLPELEVLQLWENNFTGSIPQKLGENGKLNLVDLSSNK 370
Query: 124 ITGSIPP------------------------EIGKLYQLHKLDFSLNQIVGEIPIELGNL 159
+TG++PP +GK L ++ N + G IP L L
Sbjct: 371 LTGTLPPNMCSGNKLETLITLGNFLFGSIPDSLGKCESLTRIRMGENFLNGSIPKGLFGL 430
Query: 160 KSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQ 219
L + L N LSG LP G L + LS N+LSG +P +GN V L L N+
Sbjct: 431 PKLTQVELQDNYLSGELPVAGGVSVNLGQISLSNNQLSGPLPPAIGNFTGVQKLLLDGNK 490
Query: 220 FRKEFPVELEKLVQLSELDLSHNF------------------------LGGEIPPQICNL 255
F+ P E+ KL QLS++D SHN L GEIP +I +
Sbjct: 491 FQGPIPSEVGKLQQLSKIDFSHNLFSGRIAPEISRCKLLTFVDLSRNELSGEIPNEITAM 550
Query: 256 ESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRG 315
+ L LN+S N+L G IP M L+ +D SYN L GL+P + F Y + GN
Sbjct: 551 KILNYLNLSRNHLVGSIPGSISSMQSLTSLDFSYNNLSGLVPGTGQFSYFNYTSFLGNPD 610
Query: 316 LCGDVEGFQSCKAFVSQ-KHVFENKWFL------IIIPILGVFALLFFVIGIIFGRTKRT 368
LCG G CK V++ H +K L +++ L V ++ F V+ II R+ +
Sbjct: 611 LCGPYLG--PCKDGVAKGGHQSHSKGPLSASMKLLLVLGLLVCSIAFAVVAIIKARSLKK 668
Query: 369 SKENKGSCENHRGLLSILTFEG-KIVYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGE 427
+ E++ + F+ ++++ + K + IG GG VY+G +P+G+
Sbjct: 669 ASESRA--------WRLTAFQRLDFTCDDVLDSLKE---DNIIGKGGAGIVYKGVMPNGD 717
Query: 428 VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGS 487
+VAVK+ ++ S F EI+ L IRHR+IV+ GFCS+ + LVYE + GS
Sbjct: 718 LVAVKRLAAMSRGS-SHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGS 776
Query: 488 LAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEAR 547
L E+L W R + A L Y+HHDC P IVHRD+ S N+LL S +EA
Sbjct: 777 LGEVLHGKKG-GHLHWDTRYKIALEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAH 835
Query: 548 VSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 605
V+DFG+AKFL+ ++ + AG++GY+APE AYT+KV EK DVYSFGV+ LE++ G+
Sbjct: 836 VADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRK 895
Query: 606 P-------RDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESP 658
P D + + + + S+ ++LDPRL S ++ + VA+LC+EE
Sbjct: 896 PVGEFGDGVDIVQWVRKMTDSNKDSVLKVLDPRL---SSIPIHEVTHVFYVAMLCVEEQA 952
Query: 659 ESRPTMQTVCQLLCK 673
RPTM+ V Q+L +
Sbjct: 953 VERPTMREVVQILTE 967
|
Necessary for male gametophyte development, as well as ovule specification and function. Involved in cell-cell communication process required during early anther development, and regulating cell division and differentiation to organize cell layers. Required for the development of high-ordered vascular strands within the leaf and a correlated control of leaf shape, size and symmetry. May regulate the CLV1-dependent CLV3-mediated signaling in meristems maintenance. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 673 | ||||||
| 147767326 | 1032 | hypothetical protein VITISV_008862 [Viti | 0.995 | 0.649 | 0.558 | 0.0 | |
| 225456159 | 1038 | PREDICTED: probable LRR receptor-like se | 0.992 | 0.643 | 0.554 | 0.0 | |
| 359491509 | 1032 | PREDICTED: probable LRR receptor-like se | 0.995 | 0.649 | 0.555 | 0.0 | |
| 147772402 | 996 | hypothetical protein VITISV_022117 [Viti | 0.992 | 0.670 | 0.548 | 0.0 | |
| 359491512 | 1078 | PREDICTED: probable LRR receptor-like se | 0.992 | 0.619 | 0.544 | 0.0 | |
| 225456161 | 1037 | PREDICTED: probable LRR receptor-like se | 0.991 | 0.643 | 0.539 | 0.0 | |
| 255545702 | 1008 | receptor protein kinase, putative [Ricin | 0.994 | 0.663 | 0.534 | 0.0 | |
| 186511602 | 1045 | Leucine-rich repeat-containing protein [ | 0.988 | 0.636 | 0.504 | 0.0 | |
| 297813345 | 1019 | hypothetical protein ARALYDRAFT_489780 [ | 0.988 | 0.652 | 0.502 | 0.0 | |
| 7267528 | 1027 | receptor protein kinase-like protein [Ar | 0.988 | 0.647 | 0.502 | 0.0 |
| >gi|147767326|emb|CAN68996.1| hypothetical protein VITISV_008862 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/697 (55%), Positives = 486/697 (69%), Gaps = 27/697 (3%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQL--------- 52
N L+G+IP S+GN NL+ LYL N LS S+P EIG L +L LEID NQL
Sbjct: 336 NQLNGSIPTSLGNLINLEILYLRDNKLSSSIPPEIGKLHKLVELEIDTNQLSGFLPEGIC 395
Query: 53 ---------------FGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISH 97
G IP SL+N SL R L++N LTGNISE FG+ PNL +++S+
Sbjct: 396 QGGSLENFTVFDNFLIGPIPESLKNCPSLARARLQRNQLTGNISEAFGVCPNLYHINLSN 455
Query: 98 NNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELG 157
N FYGE+ +WG+C +L L+ + NNITGSIP + G QL L+ S N +VGEIP +LG
Sbjct: 456 NKFYGELSQNWGRCHKLQWLDIAGNNITGSIPADFGISTQLTVLNLSSNHLVGEIPKKLG 515
Query: 158 NLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSN 217
++ SL L+LN N+LSGN+P LGSL++L YLDLS N+L+GSIPE LGN L ++YLNLSN
Sbjct: 516 SVSSLWKLILNDNRLSGNIPPELGSLADLGYLDLSGNRLNGSIPEHLGNCLDLNYLNLSN 575
Query: 218 NQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFE 277
N+ PV++ KL LS LDLSHN L GEIP QI L+SLEKLN+SHNNLSG+IP FE
Sbjct: 576 NKLSHGIPVQMGKLSHLSLLDLSHNLLTGEIPSQIQGLQSLEKLNLSHNNLSGIIPKAFE 635
Query: 278 GMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCGDVEGFQSCKAFVSQKHVFE 337
MHGL +DISYN+L G IPNS FQ I+ L+GN+GLCG V+G Q C+ + K +
Sbjct: 636 DMHGLWQVDISYNDLQGSIPNSEAFQNVTIEVLQGNKGLCGSVKGLQPCENRSATKGTHK 695
Query: 338 NKWFLIIIPILGVFALLFFVIGI-IFGRTKRTSKENKGSCENHRGLLSILTFEGKIVYEE 396
F+II +LG +L IGI + + +R +K K L SI TF+G+ YE
Sbjct: 696 -AVFIIIFSLLGALLILSAFIGISLISQGRRNAKMEKAGDVQTENLFSISTFDGRTTYEA 754
Query: 397 IIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALT 456
II ATK+FD CIG GG SVY+ ELPSG +VAVKK H + +++ Q++F+NEI+ALT
Sbjct: 755 IIEATKDFDPMYCIGEGGHGSVYKAELPSGNIVAVKKLHRFDI-DMAHQKDFMNEIRALT 813
Query: 457 EIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANA 516
EI+HRNIVK GFCSH RHSFLVYE LERGSL ILS + KE W R N+IK VA+A
Sbjct: 814 EIKHRNIVKLLGFCSHSRHSFLVYEYLERGSLGTILSKELQAKEVGWGTRVNIIKGVAHA 873
Query: 517 LSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAP 576
LSY+HHDC PPIVHRDISS NVLL S+YEA VSDFG AKFLK SSNW+ AGT+GYVAP
Sbjct: 874 LSYLHHDCVPPIVHRDISSNNVLLDSKYEAHVSDFGTAKFLKLDSSNWSTLAGTYGYVAP 933
Query: 577 ELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636
ELAYTMKVTEKCDVYSFGVLALEV++G+HP D IS LS+S N+ L ++LDPRLP P+
Sbjct: 934 ELAYTMKVTEKCDVYSFGVLALEVMRGRHPGDLISSLSASPGKDNVVLKDVLDPRLPPPT 993
Query: 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673
+ +++S++++A CL SP+SRPTMQ V Q+L +
Sbjct: 994 LRDEAEVMSVIQLATACLNGSPQSRPTMQMVSQMLSQ 1030
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225456159|ref|XP_002278561.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/702 (55%), Positives = 491/702 (69%), Gaps = 34/702 (4%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQ------ 55
N L+G+IP S+GN TNL+ L+L N LSG +P EIG L +L LEID NQLFG
Sbjct: 339 NQLNGSIPTSLGNLTNLEILFLRDNQLSGYIPQEIGKLHKLVVLEIDTNQLFGSLPEGIC 398
Query: 56 ------------------IPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISH 97
IP+SL+N +L R + N LTGNISEV G PNL F+D+S+
Sbjct: 399 QAGSLVRFAVSDNHLSGPIPKSLKNCRNLTRALFQGNRLTGNISEVVGDCPNLEFIDLSY 458
Query: 98 NNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELG 157
N F+GE+ +WG+C QL L + NNITGSIP + G L LD S N +VGEIP ++G
Sbjct: 459 NRFHGELSHNWGRCPQLQRLEIAGNNITGSIPEDFGISTNLTLLDLSSNHLVGEIPKKMG 518
Query: 158 NLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSN 217
+L SL L+LN N+LSG++P LGSLS LEYLDLS N+L+GSIPE LG+ L +HYLNLSN
Sbjct: 519 SLTSLLGLILNDNQLSGSIPPELGSLSHLEYLDLSANRLNGSIPEHLGDCLDLHYLNLSN 578
Query: 218 NQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFE 277
N+ PV++ KL LS+LDLSHN L G IPPQI L+SLE L++SHNNL G IP FE
Sbjct: 579 NKLSHGIPVQMGKLSHLSQLDLSHNLLAGGIPPQIQGLQSLEMLDLSHNNLCGFIPKAFE 638
Query: 278 GMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCGDVEGFQSCK-AF-VSQKHV 335
M LS +DISYN+L G IP+S F+ I+ L+GN+ LCG+V+G Q CK F V Q+ V
Sbjct: 639 DMPALSYVDISYNQLQGPIPHSNAFRNATIEVLKGNKDLCGNVKGLQPCKYGFGVDQQPV 698
Query: 336 FENK--WFLIIIPILGVFALLFFVIGI--IFGRTKRTSKENKGSCENHRGLLSILTFEGK 391
++ F+II P+LG LLF IGI I R +RT + +G +N L SI F+G+
Sbjct: 699 KKSHKVVFIIIFPLLGALVLLFAFIGIFLIAERRERTPEIEEGDVQND--LFSISNFDGR 756
Query: 392 IVYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNE 451
+YEEII+ATK+FD CIG GG SVY+ ELPS +VAVKK H +E++ Q++FLNE
Sbjct: 757 TMYEEIIKATKDFDPMYCIGKGGHGSVYKAELPSSNIVAVKKLHP-SDTEMANQKDFLNE 815
Query: 452 IKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIK 511
I+ALTEI+HRNIVK GFCSHPRH FLVYE LERGSLA ILS + + K+ W R N+IK
Sbjct: 816 IRALTEIKHRNIVKLLGFCSHPRHKFLVYEYLERGSLATILSREEA-KKLGWATRVNIIK 874
Query: 512 SVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF 571
VA+AL+YMHHDC PPIVHRD+SS N+LL S+YEA +SDFG AK LK SSN + AGTF
Sbjct: 875 GVAHALAYMHHDCSPPIVHRDVSSNNILLDSQYEAHISDFGTAKLLKLDSSNQSILAGTF 934
Query: 572 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631
GY+APELAYTMKVTEK DV+SFGV+ALEVIKG+HP D I LS S N++L ++LDPR
Sbjct: 935 GYLAPELAYTMKVTEKTDVFSFGVIALEVIKGRHPGDQILSLSVSPEKDNIALEDMLDPR 994
Query: 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673
LP + + ++I+IL+ A+ CL+ +P+SRPTMQTV Q+L +
Sbjct: 995 LPPLTPQDEGEVIAILKQAIECLKANPQSRPTMQTVSQMLSQ 1036
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359491509|ref|XP_002278522.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/697 (55%), Positives = 482/697 (69%), Gaps = 27/697 (3%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQL--------- 52
N L+G+IP +GN NL+ LYL N LS S+P EIG L +L LEID NQL
Sbjct: 336 NQLNGSIPTLLGNLINLEILYLRDNKLSSSIPPEIGKLHKLVELEIDTNQLSGFLPEGIC 395
Query: 53 ---------------FGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISH 97
G IP SL+N SL R L+ N LTGNISE FG+ PNL +++S+
Sbjct: 396 QGGSLENFTVFDNFLIGPIPESLKNCPSLARARLQGNQLTGNISEAFGVCPNLYHINLSN 455
Query: 98 NNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELG 157
N FYGE+ +WG+C +L L+ + NNITGSIP + G QL L+ S N +VGEIP +LG
Sbjct: 456 NKFYGELSQNWGRCHKLQWLDIAGNNITGSIPADFGISTQLTVLNLSSNHLVGEIPKKLG 515
Query: 158 NLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSN 217
++ SL L+LN N+LSGN+P LGSL++L YLDLS N+L+GSIPE LGN L ++YLNLSN
Sbjct: 516 SVSSLWKLILNDNRLSGNIPPELGSLADLGYLDLSGNRLNGSIPEHLGNCLDLNYLNLSN 575
Query: 218 NQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFE 277
N+ PV++ KL LS LDLSHN L GEIP QI L+SLEKLN+SHNNLSG+IP FE
Sbjct: 576 NKLSHGIPVQMGKLSHLSLLDLSHNLLTGEIPSQIQGLQSLEKLNLSHNNLSGIIPKAFE 635
Query: 278 GMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCGDVEGFQSCKAFVSQKHVFE 337
MHGL +DISYN+L G IPNS FQ I+ L+GN+GLCG V+G Q C+ + K +
Sbjct: 636 DMHGLWQVDISYNDLQGSIPNSEAFQNVTIEVLQGNKGLCGSVKGLQPCENRSATKGTHK 695
Query: 338 NKWFLIIIPILGVFALLFFVIGI-IFGRTKRTSKENKGSCENHRGLLSILTFEGKIVYEE 396
F+II +LG +L IGI + + +R +K K L SI TF+G+ YE
Sbjct: 696 -AVFIIIFSLLGALLILSAFIGISLISQGRRNAKMEKAGDVQTENLFSISTFDGRTTYEA 754
Query: 397 IIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALT 456
II ATK+FD CIG GG SVY+ ELPSG +VAVKK H + +++ Q++F+NEI+ALT
Sbjct: 755 IIEATKDFDPMYCIGEGGHGSVYKAELPSGNIVAVKKLHRFDI-DMAHQKDFVNEIRALT 813
Query: 457 EIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANA 516
EI+HRNIVK GFCSH RHSFLVYE LERGSL ILS + KE W R N+IK V++A
Sbjct: 814 EIKHRNIVKLLGFCSHSRHSFLVYEYLERGSLGTILSKELQAKEVGWGTRVNIIKGVSHA 873
Query: 517 LSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAP 576
LSY+HHDC PPIVHRDISS NVLL S+YEA VSDFG AKFLK SSNW+ AGT+GYVAP
Sbjct: 874 LSYLHHDCVPPIVHRDISSNNVLLDSKYEAHVSDFGTAKFLKLDSSNWSTLAGTYGYVAP 933
Query: 577 ELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636
ELAYTMKVTEKCDVYSFGVLALEV++G+HP D IS LS S N+ L ++LDPRLP P+
Sbjct: 934 ELAYTMKVTEKCDVYSFGVLALEVMRGRHPGDLISSLSDSPGKDNVVLKDVLDPRLPPPT 993
Query: 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673
+ ++ S++++A CL SP+SRPTMQ V Q+L +
Sbjct: 994 FRDEAEVTSVIQLATACLNGSPQSRPTMQMVSQMLSQ 1030
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147772402|emb|CAN73988.1| hypothetical protein VITISV_022117 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 724 bits (1868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/702 (54%), Positives = 493/702 (70%), Gaps = 34/702 (4%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQ------ 55
N L+G+IP S+GN TNL+ L+L N LSG +P EIG L +L LEID NQLFG
Sbjct: 297 NQLNGSIPTSLGNLTNLETLFLRDNQLSGYIPQEIGKLHKLVVLEIDTNQLFGSLPEGIC 356
Query: 56 ------------------IPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISH 97
IP+SL+N +L R N LTGNISEV G PNL ++++S+
Sbjct: 357 QGGSLERFTVSDNHLSGPIPKSLKNCKNLTRALFGGNQLTGNISEVVGDCPNLEYINVSY 416
Query: 98 NNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELG 157
N+F+GE+ +WG+ +L L + NNITGSIP + G L LD S N + GEIP ++G
Sbjct: 417 NSFHGELSHNWGRYPRLQRLEMAWNNITGSIPEDFGISTDLTLLDLSSNHLFGEIPKKMG 476
Query: 158 NLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSN 217
++ SL L+LN N+LSGN+P LGSL++L YLDLS N+L+GSIPE LG+ L ++YLNLSN
Sbjct: 477 SVTSLWKLILNDNQLSGNIPPELGSLADLGYLDLSANRLNGSIPEHLGDCLGLNYLNLSN 536
Query: 218 NQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFE 277
N+ PV++ KL LS+LDLSHN L G+IPPQI L+SLE LN+SHNNLSG IP FE
Sbjct: 537 NKLSHGIPVQMGKLGHLSQLDLSHNLLTGDIPPQIEGLQSLENLNLSHNNLSGFIPKAFE 596
Query: 278 GMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCGDVEGFQSCK--AFVSQKHV 335
M GLS +DISYN+L G IPNS F+ I+AL+GN+GLCG+V+ + CK + V Q+ V
Sbjct: 597 EMLGLSDVDISYNQLQGPIPNSKAFRDATIEALKGNKGLCGNVKRLRPCKYGSGVDQQPV 656
Query: 336 FENK--WFLIIIPILGVFALLFFVIGI--IFGRTKRTSKENKGSCENHRGLLSILTFEGK 391
++ F+II P+LG LLF IGI I R +RT + +G +N L SI TF+G+
Sbjct: 657 KKSHKVVFIIIFPLLGALVLLFAFIGIFLIAARRERTPEIKEGEVQND--LFSISTFDGR 714
Query: 392 IVYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNE 451
+YEEII+ATK+FD CIG GG SVY+ ELPS +VAVKK H +E++ Q++FLNE
Sbjct: 715 TMYEEIIKATKDFDPMYCIGKGGHGSVYKAELPSSNIVAVKKLHP-SDTEMANQKDFLNE 773
Query: 452 IKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIK 511
I+ALTEI+HRNIVK GFCSHPRH FLVYE LERGSLA ILS + + K+ W R N+IK
Sbjct: 774 IRALTEIKHRNIVKLLGFCSHPRHKFLVYEYLERGSLATILSREEA-KKLGWATRVNIIK 832
Query: 512 SVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF 571
VA+AL+YMHHDC PPIVHRDISS N+LL S+YEA +SDFG AK LK SSN + AGTF
Sbjct: 833 GVAHALAYMHHDCSPPIVHRDISSNNILLDSQYEAHISDFGTAKLLKLDSSNQSILAGTF 892
Query: 572 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631
GY+APELAYTMKVTEK DV+SFGV+ALEVIKG+HP D I LS S N++L ++LDPR
Sbjct: 893 GYLAPELAYTMKVTEKTDVFSFGVIALEVIKGRHPGDQILSLSVSPEKDNIALEDMLDPR 952
Query: 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673
LP + + ++I+I++ A CL+ +P+SRPTMQTV Q+L +
Sbjct: 953 LPPLTPQDEGEVIAIIKQATECLKANPQSRPTMQTVSQMLSQ 994
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359491512|ref|XP_002278614.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/702 (54%), Positives = 479/702 (68%), Gaps = 34/702 (4%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQ------ 55
N L+G+IP S+GN TNL+ L+L N LSG P EIG L +L LEID N+L G
Sbjct: 346 NQLNGSIPTSLGNLTNLEILFLRDNHLSGYFPKEIGKLHKLVVLEIDTNRLSGSLPEGIC 405
Query: 56 ------------------IPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISH 97
IP+S++N +L R N LTGNISEV G PNL ++D+S+
Sbjct: 406 QGGSLVRFTVSDNLLSGPIPKSMKNCRNLTRALFGGNQLTGNISEVVGDCPNLEYIDLSY 465
Query: 98 NNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELG 157
N F+GE+ +WG+C QL L + N+ITGSIP + G L LD S N +VGEIP ++G
Sbjct: 466 NRFHGELSHNWGRCPQLQRLEMAGNDITGSIPEDFGISTNLTLLDLSSNHLVGEIPKKMG 525
Query: 158 NLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSN 217
+L SL L LN N+LSG++P LGSL L +LDLS N+L+GSI E LG L +HYLNLSN
Sbjct: 526 SLTSLLELKLNDNQLSGSIPPELGSLFSLAHLDLSANRLNGSITENLGACLNLHYLNLSN 585
Query: 218 NQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFE 277
N+ P ++ KL LS+LDLSHN L GEIPPQI LESLE LN+SHNNLSG IP FE
Sbjct: 586 NKLSNRIPAQMGKLSHLSQLDLSHNLLSGEIPPQIEGLESLENLNLSHNNLSGFIPKAFE 645
Query: 278 GMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCGDVEGFQSCK--AFVSQKHV 335
M GLS IDISYN+L G IPNS F+ I+ L+GN+ LCG+V+G Q CK + Q+ V
Sbjct: 646 EMRGLSDIDISYNQLQGPIPNSKAFRDATIELLKGNKDLCGNVKGLQPCKNDSGAGQQPV 705
Query: 336 FENK--WFLIIIPILGVFALLFFVIGI--IFGRTKRTSKENKGSCENHRGLLSILTFEGK 391
+ F+I+ P+LG LLF IGI I RTKRT + +G +N L SI TF+G+
Sbjct: 706 KKGHKIVFIIVFPLLGALVLLFAFIGIFLIAERTKRTPEIEEGDVQND--LFSISTFDGR 763
Query: 392 IVYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNE 451
+YEEII+ATK+FD CIG GG SVY+ EL SG +VAVKK ++ + +++ QR+F NE
Sbjct: 764 AMYEEIIKATKDFDPMYCIGKGGHGSVYKAELSSGNIVAVKKLYASDI-DMANQRDFFNE 822
Query: 452 IKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIK 511
++ALTEI+HRNIVK GFCSHPRHSFLVYE LERGSLA +LS + + K+ W R N+IK
Sbjct: 823 VRALTEIKHRNIVKLLGFCSHPRHSFLVYEYLERGSLAAMLSREEA-KKLGWATRINIIK 881
Query: 512 SVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF 571
VA+ALSYMHHDC PPIVHRDISS N+LL S+YE +SDFG AK LK SSN + AGTF
Sbjct: 882 GVAHALSYMHHDCSPPIVHRDISSNNILLDSQYEPHISDFGTAKLLKLDSSNQSALAGTF 941
Query: 572 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631
GYVAPE AYTMKVTEK DVYSFGV+ LEVIKG+HP D I LS S N+ L ++LDPR
Sbjct: 942 GYVAPEHAYTMKVTEKTDVYSFGVITLEVIKGRHPGDQILSLSVSPEKENIVLEDMLDPR 1001
Query: 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673
LP + + ++ISI+ +A CL +PESRPTM+ + Q+L +
Sbjct: 1002 LPPLTAQDEGEVISIINLATACLSVNPESRPTMKIISQMLSQ 1043
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225456161|ref|XP_002278590.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/702 (53%), Positives = 487/702 (69%), Gaps = 35/702 (4%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQ------ 55
N L+G+IP S+GN TNL+ L+L N LSG P EIG L +L LEID NQLFG
Sbjct: 339 NQLNGSIPTSLGNLTNLEILFLRDNRLSGYFPQEIGKLHKLVVLEIDTNQLFGSLPEGIC 398
Query: 56 ------------------IPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISH 97
IP+SL+N +L R + N LTGN+SEV G PNL F+D+S+
Sbjct: 399 QGGSLERFTVSDNHLSGPIPKSLKNCRNLTRALFQGNRLTGNVSEVVGDCPNLEFIDLSY 458
Query: 98 NNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELG 157
N F+GE+ +WG+C QL L + NNITGSIP + G L LD S N +VGEIP ++G
Sbjct: 459 NRFHGELSHNWGRCPQLQRLEIAGNNITGSIPEDFGISTNLILLDLSSNHLVGEIPKKMG 518
Query: 158 NLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSN 217
+L SL L+LN N+LSG++P LGSLS LEYLDLS N+L+GSIPE LG+ L +HYLNLSN
Sbjct: 519 SLTSLLGLILNDNQLSGSIPPELGSLSHLEYLDLSANRLNGSIPEHLGDCLDLHYLNLSN 578
Query: 218 NQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFE 277
N+ PV++ KL LS+LDLSHN L G IP QI LESLE L++SHNNL G IP FE
Sbjct: 579 NKLSHGIPVQMGKLSHLSQLDLSHNLLTGGIPAQIQGLESLEMLDLSHNNLCGFIPKAFE 638
Query: 278 GMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCGDVEGFQSCK-AF-VSQKHV 335
M LS +DISYN+L G IP+S F+ I+ L+GN+ LCG+V+G Q CK F V Q+ V
Sbjct: 639 DMPALSYVDISYNQLQGPIPHSNAFRNATIEVLKGNKDLCGNVKGLQPCKYGFGVDQQPV 698
Query: 336 FENK--WFLIIIPILGVFALLFFVIGI--IFGRTKRTSKENKGSCENHRGLLSILTFEGK 391
++ F+II P+LG LL IGI I R +RT + +G +N+ LLSI TF+G+
Sbjct: 699 KKSHKVVFIIIFPLLGALVLLSAFIGIFLIAERRERTPEIEEGDVQNN--LLSISTFDGR 756
Query: 392 IVYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNE 451
+YEEII+ATK+FD CIG GG SVY+ ELPSG +VAVKK H + +++ Q++FLN+
Sbjct: 757 AMYEEIIKATKDFDPMYCIGKGGHGSVYKAELPSGNIVAVKKLHPSDM-DMANQKDFLNK 815
Query: 452 IKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIK 511
++A+TEI+HRNIV+ GFCS+PRHSFLVYE LERGSLA ILS + + K+ W R +IK
Sbjct: 816 VRAMTEIKHRNIVRLLGFCSYPRHSFLVYEYLERGSLATILSREEA-KKLGWATRVKIIK 874
Query: 512 SVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF 571
VA+ALSYMHHDC PPIVHRDISS N+LL S+YEA +S+ G AK LK SSN ++ AGT
Sbjct: 875 GVAHALSYMHHDCSPPIVHRDISSNNILLDSQYEAHISNLGTAKLLKVDSSNQSKLAGTV 934
Query: 572 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631
GYVAPE AYTMKVTEK DVYSFGV+ALEVIKG+HP D I L S S N+ L ++LDPR
Sbjct: 935 GYVAPEHAYTMKVTEKTDVYSFGVIALEVIKGRHPGDQI-LSISVSPEKNIVLKDMLDPR 993
Query: 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673
LP + + ++++I+++A CL +P+SRPTM+ + Q+L +
Sbjct: 994 LPPLTPQDEGEVVAIIKLATACLNANPQSRPTMEIISQMLSQ 1035
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255545702|ref|XP_002513911.1| receptor protein kinase, putative [Ricinus communis] gi|223546997|gb|EEF48494.1| receptor protein kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/700 (53%), Positives = 487/700 (69%), Gaps = 31/700 (4%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLM----------QLT-------- 43
N L+G+IP S+GN + L+ L+L +N LSG +P +I NL QLT
Sbjct: 310 NKLTGSIPASLGNLSRLELLFLKNNQLSGPIPEQIANLSKLSLLQLQSNQLTGYLPQNIC 369
Query: 44 ------NLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISH 97
N +++N+L G IP+S+R+ SL R+HLE N GNISE FG+YP L F+DI +
Sbjct: 370 QSKVLQNFSVNDNRLEGPIPKSMRDCKSLVRLHLEGNQFIGNISEDFGVYPYLQFVDIRY 429
Query: 98 NNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELG 157
N F+GEI S WG C LGTL S NNI+G IPPEIG +L LDFS NQ+VG IP ELG
Sbjct: 430 NKFHGEISSKWGMCPHLGTLLISGNNISGIIPPEIGNAARLQGLDFSSNQLVGRIPKELG 489
Query: 158 NLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSN 217
L SL + L N+LS +P GSL++LE LDLS N+ + SIP +GNL+K++YLNLSN
Sbjct: 490 KLTSLVRVNLEDNQLSDGVPSEFGSLTDLESLDLSANRFNQSIPGNIGNLVKLNYLNLSN 549
Query: 218 NQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFE 277
NQF +E P++L KLV LS+LDLS NFL GEIP ++ ++SLE LN+S NNLSG IP +
Sbjct: 550 NQFSQEIPIQLGKLVHLSKLDLSQNFLIGEIPSELSGMQSLEVLNLSRNNLSGFIPGDLK 609
Query: 278 GMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCGDVEGFQSCKAFVSQKHV-- 335
MHGLS IDISYN+L G +P++ FQ I+A +GN+GLCG V+G Q CK +++
Sbjct: 610 EMHGLSSIDISYNKLEGPVPDNKAFQNSSIEAFQGNKGLCGHVQGLQPCKPSSTEQGSSI 669
Query: 336 -FENKWFLII-IPILGVFALLFFVIGIIFGRTKRTSK--ENKGSCENHRGLLSILTFEGK 391
F + FL+I +P+ G F +L F +G++F ++KR+ + E + S + +L I +F+GK
Sbjct: 670 KFHKRLFLVISLPLFGAFLILSF-LGVLFFQSKRSKEALEAEKSSQESEEILLITSFDGK 728
Query: 392 IVYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNE 451
+++EII AT +F+ CIG GG SVY+ +L SG VAVKK H + Q+EF +E
Sbjct: 729 SMHDEIIEATDSFNDIYCIGKGGCGSVYKAKLSSGSTVAVKKLHQSHDAWKPYQKEFWSE 788
Query: 452 IKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIK 511
I+ALTEI+HRNIVKFYGFCS+ +SFLVYEC+E+GSLA IL ++ + KE W R N+IK
Sbjct: 789 IRALTEIKHRNIVKFYGFCSYSAYSFLVYECIEKGSLATILRDNEAAKELEWFKRANIIK 848
Query: 512 SVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF 571
VANALSYMHHDC PPIVHRDISSKN+LL SE EARVSDFGIA+ L SS+ T AGTF
Sbjct: 849 GVANALSYMHHDCSPPIVHRDISSKNILLDSENEARVSDFGIARILNLDSSHRTALAGTF 908
Query: 572 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631
GY+APELAY++ VTEKCDVYSFGVLALEVI GKHP + IS +SSSSS + L I+D R
Sbjct: 909 GYMAPELAYSIVVTEKCDVYSFGVLALEVINGKHPGEIISSISSSSSTRKMLLENIVDLR 968
Query: 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
LP PS +Q +L++IL +A CL +P+ RPTM+ +C +L
Sbjct: 969 LPFPSPEVQVELVNILNLAFTCLNSNPQVRPTMEMICHML 1008
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|186511602|ref|NP_849538.2| Leucine-rich repeat-containing protein [Arabidopsis thaliana] gi|281185491|sp|Q8VZG8.3|Y4885_ARATH RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At4g08850; Flags: Precursor gi|18086327|gb|AAL57627.1| AT4g08850/T32A17_160 [Arabidopsis thaliana] gi|224589610|gb|ACN59338.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gi|332657282|gb|AEE82682.1| Leucine-rich repeat-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/674 (50%), Positives = 456/674 (67%), Gaps = 9/674 (1%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N LSG IPP + N T L L L +N+ +G +P I +L NL +D+N G +P+SLR
Sbjct: 368 NQLSGPIPPGIANSTELTVLQLDTNNFTGFLPDTICRGGKLENLTLDDNHFEGPVPKSLR 427
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
+ SL RV + N +G+ISE FG+YP L F+D+S+NNF+G++ ++W + Q+L S
Sbjct: 428 DCKSLIRVRFKGNSFSGDISEAFGVYPTLNFIDLSNNNFHGQLSANWEQSQKLVAFILSN 487
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N+ITG+IPPEI + QL +LD S N+I GE+P + N+ ++ L LNGN+LSG +P +
Sbjct: 488 NSITGAIPPEIWNMTQLSQLDLSSNRITGELPESISNINRISKLQLNGNRLSGKIPSGIR 547
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
L+ LEYLDLS+N+ S IP TL NL +++Y+NLS N + P L KL QL LDLS+
Sbjct: 548 LLTNLEYLDLSSNRFSSEIPPTLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSY 607
Query: 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTG 301
N L GEI Q +L++LE+L++SHNNLSG IP F+ M L+ +D+S+N L G IP++
Sbjct: 608 NQLDGEISSQFRSLQNLERLDLSHNNLSGQIPPSFKDMLALTHVDVSHNNLQGPIPDNAA 667
Query: 302 FQYDPIQALRGNRGLCGDV---EGFQSCKAFVSQK-HVFENKWFLIIIPILGVFALLFFV 357
F+ P A GN+ LCG V +G + C S+K H N I++PI+G +L
Sbjct: 668 FRNAPPDAFEGNKDLCGSVNTTQGLKPCSITSSKKSHKDRNLIIYILVPIIGAIIILSVC 727
Query: 358 IGIIFGRTKRTSK-ENKGSCENHRGLLSILTFEGKIVYEEIIRATKNFDAEQCIGIGGQA 416
GI KRT + E E+ LSI +F+GK+ Y+EII+AT FD + IG GG
Sbjct: 728 AGIFICFRKRTKQIEEHTDSESGGETLSIFSFDGKVRYQEIIKATGEFDPKYLIGTGGHG 787
Query: 417 SVYRGELPSGEVVAVKKFHSLLLSEIS---VQREFLNEIKALTEIRHRNIVKFYGFCSHP 473
VY+ +LP+ ++AVKK + S IS ++EFLNEI+ALTEIRHRN+VK +GFCSH
Sbjct: 788 KVYKAKLPNA-IMAVKKLNETTDSSISNPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHR 846
Query: 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDI 533
R++FLVYE +ERGSL ++L ND K+ W R NV+K VA+ALSYMHHD P IVHRDI
Sbjct: 847 RNTFLVYEYMERGSLRKVLENDDEAKKLDWGKRINVVKGVAHALSYMHHDRSPAIVHRDI 906
Query: 534 SSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSF 593
SS N+LL +YEA++SDFG AK LKP SSNW+ AGT+GYVAPELAY MKVTEKCDVYSF
Sbjct: 907 SSGNILLGEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSF 966
Query: 594 GVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLC 653
GVL LEVIKG+HP D +S LSSS + LSL I D RLP P+ I+++++ IL+VALLC
Sbjct: 967 GVLTLEVIKGEHPGDLVSTLSSSPPDATLSLKSISDHRLPEPTPEIKEEVLEILKVALLC 1026
Query: 654 LEESPESRPTMQTV 667
L P++RPTM ++
Sbjct: 1027 LHSDPQARPTMLSI 1040
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297813345|ref|XP_002874556.1| hypothetical protein ARALYDRAFT_489780 [Arabidopsis lyrata subsp. lyrata] gi|297320393|gb|EFH50815.1| hypothetical protein ARALYDRAFT_489780 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 661 bits (1705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/671 (50%), Positives = 457/671 (68%), Gaps = 6/671 (0%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N LSG IPP + N T L L L +N+ +G +P I +L NL +D+N G +P+SLR
Sbjct: 345 NQLSGPIPPGIANSTELTVLQLDTNNFTGFLPDTICRSGKLENLTLDDNHFEGPVPKSLR 404
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
N SL RV + NH +G+IS+ FG+YP L F+D+S+NNF+G++ ++W + +L S
Sbjct: 405 NCKSLVRVRFKGNHFSGDISDAFGVYPTLNFIDLSNNNFHGQLSANWEQSTKLVAFILSN 464
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N+I+G+IPPEI + QL++LD S N+I GE+P + N+ ++ L LNGN+LSG +P +
Sbjct: 465 NSISGAIPPEIWNMTQLNQLDLSFNRITGELPESISNINRISKLQLNGNQLSGKIPSGIR 524
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
L+ LEYLDLS+N+ IP TL NL +++Y+NLS N + P L KL QL LDLS+
Sbjct: 525 LLTNLEYLDLSSNQFGFEIPATLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSY 584
Query: 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTG 301
N L GEI Q +L++LE+L++SHNNLSG IP+ F+ M L+ ID+S+N L G IP++
Sbjct: 585 NQLDGEISSQFGSLQNLERLDLSHNNLSGQIPTSFKDMLALTHIDVSHNNLQGPIPDNAA 644
Query: 302 FQYDPIQALRGNRGLCGDVEGFQSCKAFVSQK-HVFENKWFLIIIPILGVFALLFFVIGI 360
F+ AL GN LCGD + + C S+K H N I++PI+G +L GI
Sbjct: 645 FRNASPNALEGNNDLCGDNKALKPCSITSSKKSHKDRNLIIYILVPIIGAIIILSVCAGI 704
Query: 361 IFGRTKRTSK-ENKGSCENHRGLLSILTFEGKIVYEEIIRATKNFDAEQCIGIGGQASVY 419
KRT + E E+ LSI +F+GK+ Y+EII+AT FD++ IG GG VY
Sbjct: 705 FICFRKRTKQIEENSDSESGGETLSIFSFDGKVRYQEIIKATGEFDSKYLIGTGGHGKVY 764
Query: 420 RGELPSGEVVAVKKFHSLLLSEI---SVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476
+ +LP+ ++AVKK + S I S ++EFLNEI+ALTEIRHRN+VK +GFCSH R++
Sbjct: 765 KAKLPNA-IMAVKKLNETTDSSITNPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHRRNT 823
Query: 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSK 536
FLVYE +ERGSL ++L ND K+ W R NV+K VA+ALSYMHHD P IVHRDISS
Sbjct: 824 FLVYEYMERGSLRKVLENDDEAKKLDWGKRINVVKGVADALSYMHHDRSPAIVHRDISSG 883
Query: 537 NVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVL 596
N+LL +YEA++SDFG AK LKP SSNW+ AGT+GYVAPELAY MKVTEKCDVYSFGVL
Sbjct: 884 NILLGEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSFGVL 943
Query: 597 ALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEE 656
LEVIKG+HP D +S LSSS + +LSL I D RLP P+ I+++++ IL+VAL+CL
Sbjct: 944 TLEVIKGEHPGDLVSTLSSSPPDTSLSLKTISDHRLPEPTPEIKEEVLEILKVALMCLHS 1003
Query: 657 SPESRPTMQTV 667
P++RPTM ++
Sbjct: 1004 DPQARPTMLSI 1014
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|7267528|emb|CAB78010.1| receptor protein kinase-like protein [Arabidopsis thaliana] gi|7321074|emb|CAB82121.1| receptor protein kinase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/674 (50%), Positives = 456/674 (67%), Gaps = 9/674 (1%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N LSG IPP + N T L L + +N+ +G +P I +L NL +D+N G +P+SLR
Sbjct: 350 NQLSGPIPPGIANSTELTVLQVDTNNFTGFLPDTICRGGKLENLTLDDNHFEGPVPKSLR 409
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
+ SL RV + N +G+ISE FG+YP L F+D+S+NNF+G++ ++W + Q+L S
Sbjct: 410 DCKSLIRVRFKGNSFSGDISEAFGVYPTLNFIDLSNNNFHGQLSANWEQSQKLVAFILSN 469
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N+ITG+IPPEI + QL +LD S N+I GE+P + N+ ++ L LNGN+LSG +P +
Sbjct: 470 NSITGAIPPEIWNMTQLSQLDLSSNRITGELPESISNINRISKLQLNGNRLSGKIPSGIR 529
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
L+ LEYLDLS+N+ S IP TL NL +++Y+NLS N + P L KL QL LDLS+
Sbjct: 530 LLTNLEYLDLSSNRFSSEIPPTLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSY 589
Query: 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTG 301
N L GEI Q +L++LE+L++SHNNLSG IP F+ M L+ +D+S+N L G IP++
Sbjct: 590 NQLDGEISSQFRSLQNLERLDLSHNNLSGQIPPSFKDMLALTHVDVSHNNLQGPIPDNAA 649
Query: 302 FQYDPIQALRGNRGLCGDV---EGFQSCKAFVSQK-HVFENKWFLIIIPILGVFALLFFV 357
F+ P A GN+ LCG V +G + C S+K H N I++PI+G +L
Sbjct: 650 FRNAPPDAFEGNKDLCGSVNTTQGLKPCSITSSKKSHKDRNLIIYILVPIIGAIIILSVC 709
Query: 358 IGIIFGRTKRTSK-ENKGSCENHRGLLSILTFEGKIVYEEIIRATKNFDAEQCIGIGGQA 416
GI KRT + E E+ LSI +F+GK+ Y+EII+AT FD + IG GG
Sbjct: 710 AGIFICFRKRTKQIEEHTDSESGGETLSIFSFDGKVRYQEIIKATGEFDPKYLIGTGGHG 769
Query: 417 SVYRGELPSGEVVAVKKFHSLLLSEIS---VQREFLNEIKALTEIRHRNIVKFYGFCSHP 473
VY+ +LP+ ++AVKK + S IS ++EFLNEI+ALTEIRHRN+VK +GFCSH
Sbjct: 770 KVYKAKLPNA-IMAVKKLNETTDSSISNPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHR 828
Query: 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDI 533
R++FLVYE +ERGSL ++L ND K+ W R NV+K VA+ALSYMHHD P IVHRDI
Sbjct: 829 RNTFLVYEYMERGSLRKVLENDDEAKKLDWGKRINVVKGVAHALSYMHHDRSPAIVHRDI 888
Query: 534 SSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSF 593
SS N+LL +YEA++SDFG AK LKP SSNW+ AGT+GYVAPELAY MKVTEKCDVYSF
Sbjct: 889 SSGNILLGEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSF 948
Query: 594 GVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLC 653
GVL LEVIKG+HP D +S LSSS + LSL I D RLP P+ I+++++ IL+VALLC
Sbjct: 949 GVLTLEVIKGEHPGDLVSTLSSSPPDATLSLKSISDHRLPEPTPEIKEEVLEILKVALLC 1008
Query: 654 LEESPESRPTMQTV 667
L P++RPTM ++
Sbjct: 1009 LHSDPQARPTMLSI 1022
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 673 | ||||||
| TAIR|locus:2138268 | 1045 | AT4G08850 [Arabidopsis thalian | 0.988 | 0.636 | 0.485 | 4.2e-166 | |
| TAIR|locus:2011339 | 1120 | AT1G35710 [Arabidopsis thalian | 0.985 | 0.591 | 0.484 | 1.2e-161 | |
| TAIR|locus:2020417 | 1101 | AT1G17230 [Arabidopsis thalian | 0.986 | 0.603 | 0.366 | 4e-106 | |
| TAIR|locus:2160791 | 1102 | AT5G63930 [Arabidopsis thalian | 0.986 | 0.602 | 0.366 | 6e-103 | |
| TAIR|locus:2046525 | 1124 | AT2G33170 [Arabidopsis thalian | 0.891 | 0.533 | 0.362 | 5.3e-95 | |
| TAIR|locus:2182855 | 967 | ERL2 "ERECTA-like 2" [Arabidop | 0.979 | 0.681 | 0.336 | 2.5e-97 | |
| TAIR|locus:2085949 | 1141 | AT3G24240 [Arabidopsis thalian | 0.958 | 0.565 | 0.343 | 4.2e-96 | |
| TAIR|locus:2097310 | 1002 | BAM2 "BARELY ANY MERISTEM 2" [ | 0.967 | 0.649 | 0.350 | 4.2e-95 | |
| TAIR|locus:2167948 | 966 | ERL1 "ERECTA-like 1" [Arabidop | 0.976 | 0.680 | 0.337 | 5.3e-95 | |
| TAIR|locus:2156349 | 1252 | GSO2 "GASSHO 2" [Arabidopsis t | 0.982 | 0.527 | 0.342 | 3.8e-94 |
| TAIR|locus:2138268 AT4G08850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1616 (573.9 bits), Expect = 4.2e-166, P = 4.2e-166
Identities = 327/674 (48%), Positives = 439/674 (65%)
Query: 2 NHLSGAIPPSVGNFTXXXXXXXXXXXXXXXVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N LSG IPP + N T +P I +L NL +D+N G +P+SLR
Sbjct: 368 NQLSGPIPPGIANSTELTVLQLDTNNFTGFLPDTICRGGKLENLTLDDNHFEGPVPKSLR 427
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
+ SL RV + N +G+ISE FG+YP L F+D+S+NNF+G++ ++W + Q+L S
Sbjct: 428 DCKSLIRVRFKGNSFSGDISEAFGVYPTLNFIDLSNNNFHGQLSANWEQSQKLVAFILSN 487
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N+ITG+IPPEI + QL +LD S N+I GE+P + N+ ++ L LNGN+LSG +P +
Sbjct: 488 NSITGAIPPEIWNMTQLSQLDLSSNRITGELPESISNINRISKLQLNGNRLSGKIPSGIR 547
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
L+ LEYLDLS+N+ S IP TL NL +++Y+NLS N + P L KL QL LDLS+
Sbjct: 548 LLTNLEYLDLSSNRFSSEIPPTLNNLPRLYYMNLSRNDLDQTIPEGLTKLSQLQMLDLSY 607
Query: 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTG 301
N L GEI Q +L++LE+L++SHNNLSG IP F+ M L+ +D+S+N L G IP++
Sbjct: 608 NQLDGEISSQFRSLQNLERLDLSHNNLSGQIPPSFKDMLALTHVDVSHNNLQGPIPDNAA 667
Query: 302 FQYDPIQALRGNRGLCGDV---EGFQSCKAFVSQK-HVFENKWFLIIIPILGVFALLFFV 357
F+ P A GN+ LCG V +G + C S+K H N I++PI+G +L
Sbjct: 668 FRNAPPDAFEGNKDLCGSVNTTQGLKPCSITSSKKSHKDRNLIIYILVPIIGAIIILSVC 727
Query: 358 IGIIFGRTKRTSK-ENKGSCENHRGLLSILTFEGKIVYEEIIRATKNFDAEQCIGIGGQA 416
GI KRT + E E+ LSI +F+GK+ Y+EII+AT FD + IG GG
Sbjct: 728 AGIFICFRKRTKQIEEHTDSESGGETLSIFSFDGKVRYQEIIKATGEFDPKYLIGTGGHG 787
Query: 417 SVYRGELPSGEVVAVKKFHSLLLSEIS---VQREFLNEIKALTEIRHRNIVKFYGFCSHP 473
VY+ +LP+ ++AVKK + S IS ++EFLNEI+ALTEIRHRN+VK +GFCSH
Sbjct: 788 KVYKAKLPNA-IMAVKKLNETTDSSISNPSTKQEFLNEIRALTEIRHRNVVKLFGFCSHR 846
Query: 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDI 533
R++FLVYE +ERGSL ++L ND K+ W R NV+K VA+ALSYMHHD P IVHRDI
Sbjct: 847 RNTFLVYEYMERGSLRKVLENDDEAKKLDWGKRINVVKGVAHALSYMHHDRSPAIVHRDI 906
Query: 534 SSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSF 593
SS N+LL +YEA++SDFG AK LKP SSNW+ AGT+GYVAPELAY MKVTEKCDVYSF
Sbjct: 907 SSGNILLGEDYEAKISDFGTAKLLKPDSSNWSAVAGTYGYVAPELAYAMKVTEKCDVYSF 966
Query: 594 GVLALEVIKGKHPRDFIXXXXXXXXXXXXXXXEILDPRLPLPSRNIQDKLISILEVALLC 653
GVL LEVIKG+HP D + I D RLP P+ I+++++ IL+VALLC
Sbjct: 967 GVLTLEVIKGEHPGDLVSTLSSSPPDATLSLKSISDHRLPEPTPEIKEEVLEILKVALLC 1026
Query: 654 LEESPESRPTMQTV 667
L P++RPTM ++
Sbjct: 1027 LHSDPQARPTMLSI 1040
|
|
| TAIR|locus:2011339 AT1G35710 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1574 (559.1 bits), Expect = 1.2e-161, P = 1.2e-161
Identities = 326/673 (48%), Positives = 432/673 (64%)
Query: 1 MNHLSGAIPPSVGNFTXXXXXXXXXXXXXXXVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
+NHLSGAIPP V N + P + +L N+ +D N L G IP+SL
Sbjct: 447 VNHLSGAIPPGVANSSHLTTLILDTNNFTGFFPETVCKGRKLQNISLDYNHLEGPIPKSL 506
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFS 120
R+ SL R N TG+I E FGIYP+L F+D SHN F+GEI S+W K +LG L S
Sbjct: 507 RDCKSLIRARFLGNKFTGDIFEAFGIYPDLNFIDFSHNKFHGEISSNWEKSPKLGALIMS 566
Query: 121 MNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVL 180
NNITG+IP EI + QL +LD S N + GE+P +GNL +L+ L LNGN+LSG +P L
Sbjct: 567 NNNITGAIPTEIWNMTQLVELDLSTNNLFGELPEAIGNLTNLSRLRLNGNQLSGRVPAGL 626
Query: 181 GSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLS 240
L+ LE LDLS+N S IP+T + LK+H +NLS N+F P L KL QL++LDLS
Sbjct: 627 SFLTNLESLDLSSNNFSSEIPQTFDSFLKLHDMNLSRNKFDGSIP-RLSKLTQLTQLDLS 685
Query: 241 HNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNST 300
HN L GEIP Q+ +L+SL+KL++SHNNLSGLIP+ FEGM L+ +DIS N+L G +P++
Sbjct: 686 HNQLDGEIPSQLSSLQSLDKLDLSHNNLSGLIPTTFEGMIALTNVDISNNKLEGPLPDTP 745
Query: 301 GFQYDPIQALRGNRGLCGDV--EGFQSCKAFVSQKHVFENKWFLIIIPILGVFALLFFVI 358
F+ AL N GLC ++ + + C+ K N I++PILGV +L
Sbjct: 746 TFRKATADALEENIGLCSNIPKQRLKPCRELKKPKKN-GNLVVWILVPILGVLVILSICA 804
Query: 359 GIIFGRTKRTSKENKGSCENHRGL-LSILTFEGKIVYEEIIRATKNFDAEQCIGIGGQAS 417
++ +N + + G +SI + +GK Y++II +T FD IG GG +
Sbjct: 805 NTFTYCIRKRKLQNGRNTDPETGENMSIFSVDGKFKYQDIIESTNEFDPTHLIGTGGYSK 864
Query: 418 VYRGELPSGEVVAVKKFHSLLLSEIS---VQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474
VYR L ++AVK+ H + EIS V++EFLNE+KALTEIRHRN+VK +GFCSH R
Sbjct: 865 VYRANLQD-TIIAVKRLHDTIDEEISKPVVKQEFLNEVKALTEIRHRNVVKLFGFCSHRR 923
Query: 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDIS 534
H+FL+YE +E+GSL ++L+ND K +W R NV+K VA+ALSYMHHD PIVHRDIS
Sbjct: 924 HTFLIYEYMEKGSLNKLLANDEEAKRLTWTKRINVVKGVAHALSYMHHDRITPIVHRDIS 983
Query: 535 SKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFG 594
S N+LL ++Y A++SDFG AK LK SSNW+ AGT+GYVAPE AYTMKVTEKCDVYSFG
Sbjct: 984 SGNILLDNDYTAKISDFGTAKLLKTDSSNWSAVAGTYGYVAPEFAYTMKVTEKCDVYSFG 1043
Query: 595 VLALEVIKGKHPRDFIXXXXXXXXXXXXXXXEILDPRLPLPSRNIQDKLISILEVALLCL 654
VL LE+I GKHP D + I D R+ P ++KL+ ++E+ALLCL
Sbjct: 1044 VLILELIIGKHPGDLVSSLSSSPGEALSLRS-ISDERVLEPRGQNREKLLKMVEMALLCL 1102
Query: 655 EESPESRPTMQTV 667
+ +PESRPTM ++
Sbjct: 1103 QANPESRPTMLSI 1115
|
|
| TAIR|locus:2020417 AT1G17230 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 253/690 (36%), Positives = 354/690 (51%)
Query: 2 NHLSGAIPPSVGNFTXXXXXXXXXXXXXXXVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N L G IPP +G ++ +P L L + +N+L G IPR L+
Sbjct: 389 NQLEGKIPPLIGFYSNFSVLDMSANSLSGPIPAHFCRFQTLILLSLGSNKLSGNIPRDLK 448
Query: 62 NLASLNRVHLEQNHLTGNIS-EVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFS 120
SL ++ L N LTG++ E+F + NLT L++ N G I + GK + L L +
Sbjct: 449 TCKSLTKLMLGDNQLTGSLPIELFNLQ-NLTALELHQNWLSGNISADLGKLKNLERLRLA 507
Query: 121 MNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVL 180
NN TG IPPEIG L ++ + S NQ+ G IP ELG+ ++ L L+GNK SG + + L
Sbjct: 508 NNNFTGEIPPEIGNLTKIVGFNISSNQLTGHIPKELGSCVTIQRLDLSGNKFSGYIAQEL 567
Query: 181 GSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLS-ELDL 239
G L LE L LS N+L+G IP + G+L ++ L L N + PVEL KL L L++
Sbjct: 568 GQLVYLEILRLSDNRLTGEIPHSFGDLTRLMELQLGGNLLSENIPVELGKLTSLQISLNI 627
Query: 240 SHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNS 299
SHN L G IP + NL+ LE L ++ N LSG IP+ + L +IS N L+G +P++
Sbjct: 628 SHNNLSGTIPDSLGNLQMLEILYLNDNKLSGEIPASIGNLMSLLICNISNNNLVGTVPDT 687
Query: 300 TGFQYDPIQALRGNRGLCGDVEGFQSCKAFVSQKHVFENKWFLIIIPILGVFALLFFVIG 359
FQ GN GLC C+ V N W + + + VIG
Sbjct: 688 AVFQRMDSSNFAGNHGLCNSQRSH--CQPLVPHSDSKLN-WLINGSQRQKILTITCIVIG 744
Query: 360 IIFGRTKR----TSKENKGSC-----ENHRGLLSILTFEGK-IVYEEIIRATKNFDAEQC 409
+F T T K + + + ++ F K Y+ ++ AT+NF +
Sbjct: 745 SVFLITFLGLCWTIKRREPAFVALEDQTKPDVMDSYYFPKKGFTYQGLVDATRNFSEDVV 804
Query: 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGF 469
+G G +VY+ E+ GEV+AVKK +S S F EI L +IRHRNIVK YGF
Sbjct: 805 LGRGACGTVYKAEMSGGEVIAVKKLNSRG-EGASSDNSFRAEISTLGKIRHRNIVKLYGF 863
Query: 470 CSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIV 529
C H + L+YE + +GSL E L W R + A L Y+HHDC P IV
Sbjct: 864 CYHQNSNLLLYEYMSKGSLGEQLQRGEKNCLLDWNARYRIALGAAEGLCYLHHDCRPQIV 923
Query: 530 HRDISSKNVLLSSEYEARVSDFGIAKFLKPG-SSNWTEFAGTFGYVAPELAYTMKVTEKC 588
HRDI S N+LL ++A V DFG+AK + S + + AG++GY+APE AYTMKVTEKC
Sbjct: 924 HRDIKSNNILLDERFQAHVGDFGLAKLIDLSYSKSMSAVAGSYGYIAPEYAYTMKVTEKC 983
Query: 589 DVYSFGVLALEVIKGKHP-------RDFIXXXXXXXXXXXXXXXEILDPRLPLPSRNIQD 641
D+YSFGV+ LE+I GK P D + E+ D RL +
Sbjct: 984 DIYSFGVVLLELITGKPPVQPLEQGGDLVNWVRRSIRNMIPTI-EMFDARLDTNDKRTVH 1042
Query: 642 KLISILEVALLCLEESPESRPTMQTVCQLL 671
++ +L++AL C SP SRPTM+ V ++
Sbjct: 1043 EMSLVLKIALFCTSNSPASRPTMREVVAMI 1072
|
|
| TAIR|locus:2160791 AT5G63930 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1020 (364.1 bits), Expect = 6.0e-103, P = 6.0e-103
Identities = 253/690 (36%), Positives = 355/690 (51%)
Query: 2 NHLSGAIPPSVGNFTXXXXXXXXXXXXXXXVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N LSG IPP +G ++ +P + + L + N L G IP +
Sbjct: 395 NSLSGTIPPKLGWYSDLWVLDMSDNHLSGRIPSYLCLHSNMIILNLGTNNLSGNIPTGIT 454
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
+L ++ L +N+L G N+T +++ N F G I G C L L +
Sbjct: 455 TCKTLVQLRLARNNLVGRFPSNLCKQVNVTAIELGQNRFRGSIPREVGNCSALQRLQLAD 514
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N TG +P EIG L QL L+ S N++ GE+P E+ N K L L + N SG LP +G
Sbjct: 515 NGFTGELPREIGMLSQLGTLNISSNKLTGEVPSEIFNCKMLQRLDMCCNNFSGTLPSEVG 574
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLS-ELDLS 240
SL +LE L LS N LSG+IP LGNL ++ L + N F P EL L L L+LS
Sbjct: 575 SLYQLELLKLSNNNLSGTIPVALGNLSRLTELQMGGNLFNGSIPRELGSLTGLQIALNLS 634
Query: 241 HNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNST 300
+N L GEIPP++ NL LE L +++NNLSG IPS F + L + SYN L G IP
Sbjct: 635 YNKLTGEIPPELSNLVMLEFLLLNNNNLSGEIPSSFANLSSLLGYNFSYNSLTGPIPLLR 694
Query: 301 GFQYDPIQALRGNRGLCG-------DVEGFQSCKAFVSQKHVFENKWFLIIIPILG-VFA 352
+ + GN GLCG + F ++ + +K I ++G V
Sbjct: 695 NIS---MSSFIGNEGLCGPPLNQCIQTQPFAPSQSTGKPGGMRSSKIIAITAAVIGGVSL 751
Query: 353 LLFFVIGIIFGRTKRTSKENKGSCENHRGLLSILTFEGK--IVYEEIIRATKNFDAEQCI 410
+L +I + R RT + + L I F K +++++ AT NFD +
Sbjct: 752 MLIALIVYLMRRPVRTVASSAQDGQPSEMSLDIY-FPPKEGFTFQDLVAATDNFDESFVV 810
Query: 411 GIGGQASVYRGELPSGEVVAVKKFHSLLL--SEISVQREFLNEIKALTEIRHRNIVKFYG 468
G G +VY+ LP+G +AVKK S + +V F EI L IRHRNIVK +G
Sbjct: 811 GRGACGTVYKAVLPAGYTLAVKKLASNHEGGNNNNVDNSFRAEILTLGNIRHRNIVKLHG 870
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPI 528
FC+H + L+YE + +GSL EIL +D S W R + A L+Y+HHDC P I
Sbjct: 871 FCNHQGSNLLLYEYMPKGSLGEIL-HDPSCN-LDWSKRFKIALGAAQGLAYLHHDCKPRI 928
Query: 529 VHRDISSKNVLLSSEYEARVSDFGIAKFLK-PGSSNWTEFAGTFGYVAPELAYTMKVTEK 587
HRDI S N+LL ++EA V DFG+AK + P S + + AG++GY+APE AYTMKVTEK
Sbjct: 929 FHRDIKSNNILLDDKFEAHVGDFGLAKVIDMPHSKSMSAIAGSYGYIAPEYAYTMKVTEK 988
Query: 588 CDVYSFGVLALEVIKGKHPRDFIXXXXX------XXXXXXXXXXEILDPRLPLPSRNIQD 641
D+YS+GV+ LE++ GK P I +LD RL L I
Sbjct: 989 SDIYSYGVVLLELLTGKAPVQPIDQGGDVVNWVRSYIRRDALSSGVLDARLTLEDERIVS 1048
Query: 642 KLISILEVALLCLEESPESRPTMQTVCQLL 671
++++L++ALLC SP +RP+M+ V +L
Sbjct: 1049 HMLTVLKIALLCTSVSPVARPSMRQVVLML 1078
|
|
| TAIR|locus:2046525 AT2G33170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
Identities = 227/626 (36%), Positives = 332/626 (53%)
Query: 2 NHLSGAIPPSVGNFTXXXXXXXXXXXXXXXVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N LSG IP +G ++ +P I L L + +N++FG IP +
Sbjct: 407 NSLSGVIPQGLGLYSPLWVVDFSENQLSGKIPPFICQQSNLILLNLGSNRIFGNIPPGVL 466
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
SL ++ + N LTG NL+ +++ N F G + G CQ+L L+ +
Sbjct: 467 RCKSLLQLRVVGNRLTGQFPTELCKLVNLSAIELDQNRFSGPLPPEIGTCQKLQRLHLAA 526
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N + ++P EI KL L + S N + G IP E+ N K L L L+ N G+LP LG
Sbjct: 527 NQFSSNLPNEISKLSNLVTFNVSSNSLTGPIPSEIANCKMLQRLDLSRNSFIGSLPPELG 586
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLS-ELDLS 240
SL +LE L LS N+ SG+IP T+GNL + L + N F P +L L L ++LS
Sbjct: 587 SLHQLEILRLSENRFSGNIPFTIGNLTHLTELQMGGNLFSGSIPPQLGLLSSLQIAMNLS 646
Query: 241 HNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNST 300
+N GEIPP+I NL L L++++N+LSG IP+ FE + L + SYN L G +P++
Sbjct: 647 YNDFSGEIPPEIGNLHLLMYLSLNNNHLSGEIPTTFENLSSLLGCNFSYNNLTGQLPHTQ 706
Query: 301 GFQYDPIQALRGNRGLCGDVEGFQSCK-AFVSQKHVFENKW--------FLIIIPILGVF 351
FQ + + GN+GLCG +SC + S H+ K +I+ ++G
Sbjct: 707 IFQNMTLTSFLGNKGLCGG--HLRSCDPSHSSWPHISSLKAGSARRGRIIIIVSSVIGGI 764
Query: 352 ALLFFVIGIIFGRT--KRTSK--ENKGSCENHRGLLSILTFEGKIVYEEIIRATKNFDAE 407
+LL I + F R + T+ +K + + + + ++I+ ATK F
Sbjct: 765 SLLLIAIVVHFLRNPVEPTAPYVHDKEPFFQESDIYFVP--KERFTVKDILEATKGFHDS 822
Query: 408 QCIGIGGQASVYRGELPSGEVVAVKKFHSLLL----SEISVQREFLNEIKALTEIRHRNI 463
+G G +VY+ +PSG+ +AVKK S + + F EI L +IRHRNI
Sbjct: 823 YIVGRGACGTVYKAVMPSGKTIAVKKLESNREGNNNNSNNTDNSFRAEILTLGKIRHRNI 882
Query: 464 VKFYGFCSHP--RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH 521
V+ Y FC H + L+YE + RGSL E+L + G W R + A L+Y+H
Sbjct: 883 VRLYSFCYHQGSNSNLLLYEYMSRGSLGELL-HGGKSHSMDWPTRFAIALGAAEGLAYLH 941
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK-PGSSNWTEFAGTFGYVAPELAY 580
HDC P I+HRDI S N+L+ +EA V DFG+AK + P S + + AG++GY+APE AY
Sbjct: 942 HDCKPRIIHRDIKSNNILIDENFEAHVGDFGLAKVIDMPLSKSVSAVAGSYGYIAPEYAY 1001
Query: 581 TMKVTEKCDVYSFGVLALEVIKGKHP 606
TMKVTEKCD+YSFGV+ LE++ GK P
Sbjct: 1002 TMKVTEKCDIYSFGVVLLELLTGKAP 1027
|
|
| TAIR|locus:2182855 ERL2 "ERECTA-like 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 967 (345.5 bits), Expect = 2.5e-97, P = 2.5e-97
Identities = 228/678 (33%), Positives = 350/678 (51%)
Query: 2 NHLSGAIPPSVGNFTXXXXXXXXXXXXXXXVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N ++G IP ++G F +P IG + L L++ +N+L G IP L
Sbjct: 251 NQITGVIPYNIG-FLQVATLSLQGNKLTGRIPEVIGLMQALAVLDLSDNELTGPIPPILG 309
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
NL+ +++L N LTG I G L++L ++ N G+I GK +QL LN +
Sbjct: 310 NLSFTGKLYLHGNKLTGQIPPELGNMSRLSYLQLNDNELVGKIPPELGKLEQLFELNLAN 369
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
NN+ G IP I L++ + N + G +P+E NL SL YL L+ N G +P LG
Sbjct: 370 NNLVGLIPSNISSCAALNQFNVHGNFLSGAVPLEFRNLGSLTYLNLSSNSFKGKIPAELG 429
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
+ L+ LDLS N SGSIP TLG+L + LNLS N P E L + +D+S
Sbjct: 430 HIINLDTLDLSGNNFSGSIPLTLGDLEHLLILNLSRNHLNGTLPAEFGNLRSIQIIDVSF 489
Query: 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTG 301
NFL G IP ++ L+++ L +++N + G IP L+ ++IS+N L G+IP
Sbjct: 490 NFLAGVIPTELGQLQNINSLILNNNKIHGKIPDQLTNCFSLANLNISFNNLSGIIPPMKN 549
Query: 302 F-QYDPIQALRGNRGLCGDVEGFQSCKAFVSQKHVFENKWFLIIIPILGVFALLFFVIGI 360
F ++ P GN LCG+ G C + + VF +I +LG L+ +
Sbjct: 550 FTRFSPASFF-GNPFLCGNWVG-SICGPSLPKSQVFTR--VAVICMVLGFITLICMIFIA 605
Query: 361 IFGRTKRTSKENKGSCENHRGL--LSILTFEGKI-VYEEIIRATKNFDAEQCIGIGGQAS 417
++ ++K+ KGS + G L IL + I +++I+R T+N D + IG G ++
Sbjct: 606 VY-KSKQQKPVLKGSSKQPEGSTKLVILHMDMAIHTFDDIMRVTENLDEKYIIGYGASST 664
Query: 418 VYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477
VY+ + +A+K+ ++ S REF E++ + IRHRNIV +G+ P +
Sbjct: 665 VYKCTSKTSRPIAIKRIYNQYPSNF---REFETELETIGSIRHRNIVSLHGYALSPFGNL 721
Query: 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKN 537
L Y+ +E GSL ++L G + W R + A L+Y+HHDC P I+HRDI S N
Sbjct: 722 LFYDYMENGSLWDLLHGPGKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSN 781
Query: 538 VLLSSEYEARVSDFGIAKFLKPGSSNW--TEFAGTFGYVAPELAYTMKVTEKCDVYSFGV 595
+LL +EAR+SDFGIAK + P + + T GT GY+ PE A T ++ EK D+YSFG+
Sbjct: 782 ILLDGNFEARLSDFGIAKSI-PATKTYASTYVLGTIGYIDPEYARTSRLNEKSDIYSFGI 840
Query: 596 LALEVIKGKHPRDFIXXXXXXXXXXXXXXX--EILDPRLPLPSRNIQDKLISILEVALLC 653
+ LE++ GK D E +D + + + + ++ALLC
Sbjct: 841 VLLELLTGKKAVDNEANLHQMILSKADDNTVMEAVDAEVSVTCMD-SGHIKKTFQLALLC 899
Query: 654 LEESPESRPTMQTVCQLL 671
+ +P RPTMQ V ++L
Sbjct: 900 TKRNPLERPTMQEVSRVL 917
|
|
| TAIR|locus:2085949 AT3G24240 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 937 (334.9 bits), Expect = 4.2e-96, Sum P(2) = 4.2e-96
Identities = 235/685 (34%), Positives = 357/685 (52%)
Query: 2 NHLSGAIPPSVGNFTXXXXXXXXXXXXXXXVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N L G+IPP + + T +P + L LT L + +N L G IP+ +
Sbjct: 404 NQLEGSIPPGLADCTDLQALDLSRNSLTGTIPSGLFMLRNLTKLLLISNSLSGFIPQEIG 463
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
N +SL R+ L N +TG I G + FLD S N +G++ G C +L ++ S
Sbjct: 464 NCSSLVRLRLGFNRITGEIPSGIGSLKKINFLDFSSNRLHGKVPDEIGSCSELQMIDLSN 523
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N++ GS+P + L L LD S NQ G+IP LG L SLN L+L+ N SG++P LG
Sbjct: 524 NSLEGSLPNPVSSLSGLQVLDVSANQFSGKIPASLGRLVSLNKLILSKNLFSGSIPTSLG 583
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHY-LNLSNNQFRKEFPVELEKLVQLSELDLS 240
S L+ LDL +N+LSG IP LG++ + LNLS+N+ + P ++ L +LS LDLS
Sbjct: 584 MCSGLQLLDLGSNELSGEIPSELGDIENLEIALNLSSNRLTGKIPSKIASLNKLSILDLS 643
Query: 241 HNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNST 300
HN L G++ P + N+E+L LN+S+N+ SG +P + LS D+ N+ L +
Sbjct: 644 HNMLEGDLAP-LANIENLVSLNISYNSFSGYLPDN-KLFRQLSPQDLEGNKKLCSSTQDS 701
Query: 301 GFQYDPIQALRGNRGLCGDVEGFQSCKAFVSQKHVFENKWFLIIIPILGVFALLFFVIGI 360
F + +GN GL D + ++ K ++ + +++ ILG A++
Sbjct: 702 CF----LTYRKGN-GLGDDGDASRTRKLRLTLALLIT---LTVVLMILGAVAVI------ 747
Query: 361 IFGRTKRTSKENKGSCENHRGLLSILTFEGKIVY--EEIIRATKNFDAEQCIGIGGQASV 418
R +R + S F+ K+ + ++IIR IG G V
Sbjct: 748 ---RARRNIDNERDSELGETYKWQFTPFQ-KLNFSVDQIIRCLVE---PNVIGKGCSGVV 800
Query: 419 YRGELPSGEVVAVKKFHSLLLS------EISVQREFLNEIKALTEIRHRNIVKFYGFCSH 472
YR ++ +GEV+AVKK +++ +V+ F E+K L IRH+NIV+F G C +
Sbjct: 801 YRADVDNGEVIAVKKLWPAMVNGGHDEKTKNVRDSFSAEVKTLGTIRHKNIVRFLGCCWN 860
Query: 473 PRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHR 531
L+Y+ + GSL +L GS W +R ++ A L+Y+HHDC PPIVHR
Sbjct: 861 RNTRLLMYDYMPNGSLGSLLHERRGS--SLDWDLRYRILLGAAQGLAYLHHDCLPPIVHR 918
Query: 532 DISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE--FAGTFGYVAPELAYTMKVTEKCD 589
DI + N+L+ ++E ++DFG+AK + G AG++GY+APE Y+MK+TEK D
Sbjct: 919 DIKANNILIGLDFEPYIADFGLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSD 978
Query: 590 VYSFGVLALEVIKGKHPRDFIXXXXXXXXX---XXXXXXEILDPRLPLPSRNIQDKLISI 646
VYS+GV+ LEV+ GK P D E+LD L + D+++ +
Sbjct: 979 VYSYGVVVLEVLTGKQPIDPTVPEGIHLVDWVRQNRGSLEVLDSTLRSRTEAEADEMMQV 1038
Query: 647 LEVALLCLEESPESRPTMQTVCQLL 671
L ALLC+ SP+ RPTM+ V +L
Sbjct: 1039 LGTALLCVNSSPDERPTMKDVAAML 1063
|
|
| TAIR|locus:2097310 BAM2 "BARELY ANY MERISTEM 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 946 (338.1 bits), Expect = 4.2e-95, P = 4.2e-95
Identities = 240/684 (35%), Positives = 352/684 (51%)
Query: 2 NHLSGAIPPSVGNFTXXXXXXXXXXXXXXXVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N +G IP S +P IG + +L L++ N G IP+ L
Sbjct: 297 NMFTGEIPTSFSQLKNLTLLNLFRNKLYGAIPEFIGEMPELEVLQLWENNFTGSIPQKLG 356
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNF-YGEIWSSWGKCQQLGTLNFS 120
L + L N LTG + L L I+ NF +G I S GKC+ L +
Sbjct: 357 ENGRLVILDLSSNKLTGTLPPNMCSGNRLMTL-ITLGNFLFGSIPDSLGKCESLTRIRMG 415
Query: 121 MNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKS-LNYLVLNGNKLSGNLPRV 179
N + GSIP E+ L +L +++ N + GE+PI G + L + L+ N+LSG+LP
Sbjct: 416 ENFLNGSIPKELFGLPKLSQVELQDNYLTGELPISGGGVSGDLGQISLSNNQLSGSLPAA 475
Query: 180 LGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDL 239
+G+LS ++ L L NK SGSIP +G L ++ L+ S+N F E+ + L+ +DL
Sbjct: 476 IGNLSGVQKLLLDGNKFSGSIPPEIGRLQQLSKLDFSHNLFSGRIAPEISRCKLLTFVDL 535
Query: 240 SHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNS 299
S N L G+IP ++ ++ L LN+S N+L G IP M L+ +D SYN L GL+P++
Sbjct: 536 SRNELSGDIPNELTGMKILNYLNLSRNHLVGSIPVTIASMQSLTSVDFSYNNLSGLVPST 595
Query: 300 TGFQYDPIQALRGNRGLCGDVEGFQSCKAFVSQKHVFENKWFLIIIPILGVF--ALLFFV 357
F Y + GN LCG G C Q HV ++ +LG+ +++F +
Sbjct: 596 GQFSYFNYTSFVGNSHLCGPYLG--PCGKGTHQSHVKPLSATTKLLLVLGLLFCSMVFAI 653
Query: 358 IGIIFGRTKRTSKENKGSCENHRGLLSILTFEG-KIVYEEIIRATKNFDAEQCIGIGGQA 416
+ II R+ R + E K + F+ ++++ + K + IG GG
Sbjct: 654 VAIIKARSLRNASEAKA--------WRLTAFQRLDFTCDDVLDSLKE---DNIIGKGGAG 702
Query: 417 SVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476
VY+G +P G++VAVK+ ++ S F EI+ L IRHR+IV+ GFCS+ +
Sbjct: 703 IVYKGTMPKGDLVAVKRLATMSHGS-SHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETN 761
Query: 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSK 536
LVYE + GSL E+L W R + A L Y+HHDC P IVHRD+ S
Sbjct: 762 LLVYEYMPNGSLGEVLHGKKG-GHLHWNTRYKIALEAAKGLCYLHHDCSPLIVHRDVKSN 820
Query: 537 NVLLSSEYEARVSDFGIAKFLKP-GSSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFG 594
N+LL S +EA V+DFG+AKFL+ G+S + AG++GY+APE AYT+KV EK DVYSFG
Sbjct: 821 NILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFG 880
Query: 595 VLALEVIKGKHPR-------DFIXXXXXXXXXXXXXXXEILDPRLPLPSRNIQDKLISIL 647
V+ LE+I GK P D + +++D RL S + + + +
Sbjct: 881 VVLLELITGKKPVGEFGDGVDIVQWVRSMTDSNKDCVLKVIDLRLS--SVPVHE-VTHVF 937
Query: 648 EVALLCLEESPESRPTMQTVCQLL 671
VALLC+EE RPTM+ V Q+L
Sbjct: 938 YVALLCVEEQAVERPTMREVVQIL 961
|
|
| TAIR|locus:2167948 ERL1 "ERECTA-like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 945 (337.7 bits), Expect = 5.3e-95, P = 5.3e-95
Identities = 229/679 (33%), Positives = 356/679 (52%)
Query: 2 NHLSGAIPPSVGNFTXXXXXXXXXXXXXXXVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N ++G IP ++G F +P IG + L L++ +N+L G IP L
Sbjct: 249 NQITGEIPYNIG-FLQVATLSLQGNRLTGRIPEVIGLMQALAVLDLSDNELVGPIPPILG 307
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
NL+ +++L N LTG I G L++L ++ N G I GK +QL LN +
Sbjct: 308 NLSFTGKLYLHGNMLTGPIPSELGNMSRLSYLQLNDNKLVGTIPPELGKLEQLFELNLAN 367
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N + G IP I L++ + N + G IP+ NL SL YL L+ N G +P LG
Sbjct: 368 NRLVGPIPSNISSCAALNQFNVHGNLLSGSIPLAFRNLGSLTYLNLSSNNFKGKIPVELG 427
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
+ L+ LDLS N SGSIP TLG+L + LNLS N + P E L + +D+S
Sbjct: 428 HIINLDKLDLSGNNFSGSIPLTLGDLEHLLILNLSRNHLSGQLPAEFGNLRSIQMIDVSF 487
Query: 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTG 301
N L G IP ++ L++L L +++N L G IP L +++S+N L G++P
Sbjct: 488 NLLSGVIPTELGQLQNLNSLILNNNKLHGKIPDQLTNCFTLVNLNVSFNNLSGIVPPMKN 547
Query: 302 F-QYDPIQALRGNRGLCGDVEGFQSCKAFVSQKHVFENKWFLIIIPILGVFALLFFVIGI 360
F ++ P + GN LCG+ G C + + VF ++ LI I +LGV LL +
Sbjct: 548 FSRFAPASFV-GNPYLCGNWVG-SICGP-LPKSRVF-SRGALICI-VLGVITLLCMIFLA 602
Query: 361 IFGRTKRTSKENKGSCENHRGL--LSILTFEGKI-VYEEIIRATKNFDAEQCIGIGGQAS 417
++ ++ + K +GS + GL L IL + I +++I+R T+N + + IG G ++
Sbjct: 603 VY-KSMQQKKILQGSSKQAEGLTKLVILHMDMAIHTFDDIMRVTENLNEKFIIGYGASST 661
Query: 418 VYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477
VY+ L S +A+K+ ++ + REF E++ + IRHRNIV +G+ P +
Sbjct: 662 VYKCALKSSRPIAIKRLYNQYPHNL---REFETELETIGSIRHRNIVSLHGYALSPTGNL 718
Query: 478 LVYECLERGSLAEILSNDGSIKE--FSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISS 535
L Y+ +E GSL ++L GS+K+ W R + A L+Y+HHDC P I+HRDI S
Sbjct: 719 LFYDYMENGSLWDLLH--GSLKKVKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKS 776
Query: 536 KNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA-GTFGYVAPELAYTMKVTEKCDVYSFG 594
N+LL +EA +SDFGIAK + ++ + + GT GY+ PE A T ++ EK D+YSFG
Sbjct: 777 SNILLDENFEAHLSDFGIAKSIPASKTHASTYVLGTIGYIDPEYARTSRINEKSDIYSFG 836
Query: 595 VLALEVIKGKHPRDFIXXXXXXXXXXXXXXX--EILDPRLPLPSRNIQDKLISILEVALL 652
++ LE++ GK D E +DP + + ++ + ++ALL
Sbjct: 837 IVLLELLTGKKAVDNEANLHQLILSKADDNTVMEAVDPEVTVTCMDL-GHIRKTFQLALL 895
Query: 653 CLEESPESRPTMQTVCQLL 671
C + +P RPTM V ++L
Sbjct: 896 CTKRNPLERPTMLEVSRVL 914
|
|
| TAIR|locus:2156349 GSO2 "GASSHO 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
Identities = 241/703 (34%), Positives = 355/703 (50%)
Query: 2 NHLSGAIPPSVGNFTXXXXXXXXXXXXXXXVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N L G +P S+ N + G+ L+ ++ N G IP L
Sbjct: 539 NSLQGNLPDSLINLKNLTRINFSSNKFNGSISPLCGSSSYLS-FDVTENGFEGDIPLELG 597
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
+L+R+ L +N TG I FG L+ LDIS N+ G I G C++L ++ +
Sbjct: 598 KSTNLDRLRLGKNQFTGRIPRTFGKISELSLLDISRNSLSGIIPVELGLCKKLTHIDLNN 657
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N ++G IP +GKL L +L S N+ VG +P E+ +L ++ L L+GN L+G++P+ +G
Sbjct: 658 NYLSGVIPTWLGKLPLLGELKLSSNKFVGSLPTEIFSLTNILTLFLDGNSLNGSIPQEIG 717
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQL-SELDLS 240
+L L L+L N+LSG +P T+G L K+ L LS N E PVE+ +L L S LDLS
Sbjct: 718 NLQALNALNLEENQLSGPLPSTIGKLSKLFELRLSRNALTGEIPVEIGQLQDLQSALDLS 777
Query: 241 HNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNST 300
+N G IP I L LE L++SHN L G +P M L +++SYN L G +
Sbjct: 778 YNNFTGRIPSTISTLPKLESLDLSHNQLVGEVPGQIGDMKSLGYLNLSYNNLEGKLKKQ- 836
Query: 301 GFQYDPIQALRGNRGLCGDVEGFQSC-KAFVSQKHVFENKWFLIIIPI--LGVFALLFFV 357
F A GN GLCG C +A + K +II I L AL+ V
Sbjct: 837 -FSRWQADAFVGNAGLCGSP--LSHCNRAGSKNQRSLSPKTVVIISAISSLAAIALMVLV 893
Query: 358 IGIIFGRTKRTSKENKG--------SCENHRGLLSILTFEGKIVYEEIIRATKNFDAEQC 409
I + F + K+ +G S + L S + I +++I+ AT + E
Sbjct: 894 IILFFKQNHDLFKKVRGGNSAFSSNSSSSQAPLFSNGGAKSDIKWDDIMEATHYLNEEFM 953
Query: 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGF 469
IG GG VY+ EL +GE +AVKK L ++ + F E+K L IRHR++VK G+
Sbjct: 954 IGSGGSGKVYKAELKNGETIAVKKI--LWKDDLMSNKSFNREVKTLGTIRHRHLVKLMGY 1011
Query: 470 CSHPRH--SFLVYECLERGSLAEIL-SNDGSIKE--FSWIVRTNVIKSVANALSYMHHDC 524
CS + L+YE + GS+ + L +N+ + K+ W R + +A + Y+H+DC
Sbjct: 1012 CSSKADGLNLLIYEYMANGSVWDWLHANENTKKKEVLGWETRLKIALGLAQGVEYLHYDC 1071
Query: 525 FPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE----FAGTFGYVAPELAY 580
PPIVHRDI S NVLL S EA + DFG+AK L TE FAG++GY+APE AY
Sbjct: 1072 VPPIVHRDIKSSNVLLDSNIEAHLGDFGLAKILTGNYDTNTESNTMFAGSYGYIAPEYAY 1131
Query: 581 TMKVTEKCDVYSFGVLALEVIKGKHPR--------DFIXXXXXXXXX--XXXXXXEILDP 630
++K TEK DVYS G++ +E++ GK P D + +++D
Sbjct: 1132 SLKATEKSDVYSMGIVLMEIVTGKMPTEAMFDEETDMVRWVETVLDTPPGSEAREKLIDS 1191
Query: 631 RLP--LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
L LP ++ +LE+AL C + P+ RP+ + + L
Sbjct: 1192 ELKSLLPCE--EEAAYQVLEIALQCTKSYPQERPSSRQASEYL 1232
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|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q8VZG8 | Y4885_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.5044 | 0.9881 | 0.6363 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| fgenesh2_kg.6__2914__AT4G08850.1 | annotation not avaliable (1019 aa) | ||||||||||
(Arabidopsis lyrata) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 673 | |||
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 2e-86 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 8e-51 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 1e-48 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 2e-47 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 3e-47 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 4e-47 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 8e-46 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 2e-42 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 1e-37 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 3e-37 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 4e-37 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 8e-37 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 1e-36 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 4e-36 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 6e-36 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 2e-29 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 2e-28 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 3e-28 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 4e-26 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 5e-26 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 6e-25 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 3e-24 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 4e-24 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 4e-24 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 6e-24 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 2e-23 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 3e-23 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 5e-23 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 9e-23 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 1e-22 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 8e-22 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 8e-22 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 1e-21 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 1e-21 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 1e-21 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 1e-21 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 2e-21 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 4e-21 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 7e-21 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 5e-20 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 8e-20 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 8e-20 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 9e-20 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 1e-19 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 2e-19 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 2e-19 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 2e-19 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 3e-19 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 3e-19 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 4e-19 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 5e-19 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 7e-19 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 7e-19 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 7e-19 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 1e-18 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 2e-18 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 2e-18 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 3e-18 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 5e-18 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 6e-18 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 8e-18 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 8e-18 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 8e-18 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 1e-17 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 1e-17 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 1e-17 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 1e-17 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 2e-17 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 3e-17 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 3e-17 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 3e-17 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 4e-17 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 6e-17 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 6e-17 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 6e-17 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 7e-17 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 8e-17 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 1e-16 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 1e-16 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 1e-16 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 2e-16 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 2e-16 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 2e-16 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 3e-16 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 4e-16 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 5e-16 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 8e-16 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 9e-16 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 1e-15 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 1e-15 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 1e-15 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 1e-15 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 1e-15 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 1e-15 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 2e-15 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 2e-15 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 2e-15 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 2e-15 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 3e-15 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 3e-15 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 3e-15 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 3e-15 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 4e-15 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 6e-15 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 7e-15 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 8e-15 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 8e-15 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 8e-15 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 8e-15 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 1e-14 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 1e-14 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 4e-14 | |
| cd05048 | 283 | cd05048, PTKc_Ror, Catalytic Domain of the Protein | 5e-14 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 6e-14 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 6e-14 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 7e-14 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 8e-14 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 9e-14 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-13 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 1e-13 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 1e-13 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 2e-13 | |
| cd05036 | 277 | cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro | 2e-13 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-13 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 3e-13 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 3e-13 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 4e-13 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 4e-13 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 5e-13 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 5e-13 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 5e-13 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 7e-13 | |
| cd05111 | 279 | cd05111, PTK_HER3, Pseudokinase domain of the Prot | 8e-13 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 1e-12 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 1e-12 | |
| cd05044 | 269 | cd05044, PTKc_c-ros, Catalytic domain of the Prote | 1e-12 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-12 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 2e-12 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 2e-12 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 2e-12 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 3e-12 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 3e-12 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 3e-12 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 3e-12 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 4e-12 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 6e-12 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 6e-12 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 1e-11 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 1e-11 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 1e-11 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 2e-11 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 2e-11 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 2e-11 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 3e-11 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 3e-11 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 4e-11 | |
| cd05097 | 295 | cd05097, PTKc_DDR_like, Catalytic domain of Discoi | 4e-11 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 4e-11 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 4e-11 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 5e-11 | |
| COG4886 | 394 | COG4886, COG4886, Leucine-rich repeat (LRR) protei | 6e-11 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 8e-11 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 8e-11 | |
| PHA02988 | 283 | PHA02988, PHA02988, hypothetical protein; Provisio | 9e-11 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-10 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 1e-10 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 1e-10 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 1e-10 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 2e-10 | |
| cd05088 | 303 | cd05088, PTKc_Tie2, Catalytic domain of the Protei | 2e-10 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 2e-10 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 2e-10 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 2e-10 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 4e-10 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 4e-10 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 4e-10 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 5e-10 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 6e-10 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 9e-10 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 1e-09 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 2e-09 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 2e-09 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 2e-09 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 2e-09 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 2e-09 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 2e-09 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 3e-09 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 3e-09 | |
| cd05053 | 293 | cd05053, PTKc_FGFR, Catalytic domain of the Protei | 3e-09 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 4e-09 | |
| cd05062 | 277 | cd05062, PTKc_IGF-1R, Catalytic domain of the Prot | 5e-09 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 5e-09 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 5e-09 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 6e-09 | |
| cd05095 | 296 | cd05095, PTKc_DDR2, Catalytic domain of the Protei | 8e-09 | |
| cd05091 | 283 | cd05091, PTKc_Ror2, Catalytic domain of the Protei | 8e-09 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 9e-09 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 1e-08 | |
| cd05058 | 262 | cd05058, PTKc_Met_Ron, Catalytic domain of the Pro | 1e-08 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 1e-08 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 2e-08 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 2e-08 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 2e-08 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 2e-08 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 2e-08 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 2e-08 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 3e-08 | |
| cd05089 | 297 | cd05089, PTKc_Tie1, Catalytic domain of the Protei | 3e-08 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 3e-08 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 3e-08 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 4e-08 | |
| cd05075 | 272 | cd05075, PTKc_Axl, Catalytic domain of the Protein | 4e-08 | |
| cd05047 | 270 | cd05047, PTKc_Tie, Catalytic domain of Tie Protein | 4e-08 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 4e-08 | |
| cd05090 | 283 | cd05090, PTKc_Ror1, Catalytic domain of the Protei | 4e-08 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 5e-08 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 5e-08 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 5e-08 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 6e-08 | |
| cd05061 | 288 | cd05061, PTKc_InsR, Catalytic domain of the Protei | 7e-08 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 7e-08 | |
| cd05086 | 268 | cd05086, PTKc_Aatyk2, Catalytic domain of the Prot | 8e-08 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 8e-08 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 9e-08 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 1e-07 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 1e-07 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 1e-07 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 1e-07 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 2e-07 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 2e-07 | |
| cd05102 | 338 | cd05102, PTKc_VEGFR3, Catalytic domain of the Prot | 2e-07 | |
| cd05054 | 337 | cd05054, PTKc_VEGFR, Catalytic domain of the Prote | 2e-07 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 2e-07 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 2e-07 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 2e-07 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 2e-07 | |
| cd05078 | 258 | cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat | 2e-07 | |
| cd05087 | 269 | cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t | 2e-07 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 2e-07 | |
| cd05105 | 400 | cd05105, PTKc_PDGFR_alpha, Catalytic domain of the | 2e-07 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 2e-07 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 2e-07 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 2e-07 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 2e-07 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 3e-07 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 3e-07 | |
| cd05064 | 266 | cd05064, PTKc_EphR_A10, Catalytic domain of the Pr | 3e-07 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 3e-07 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 3e-07 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 3e-07 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 3e-07 | |
| PHA03210 | 501 | PHA03210, PHA03210, serine/threonine kinase US3; P | 4e-07 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 4e-07 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 4e-07 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 4e-07 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 4e-07 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 5e-07 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 6e-07 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 6e-07 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 7e-07 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 7e-07 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 8e-07 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 8e-07 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 1e-06 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 1e-06 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 1e-06 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 1e-06 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 1e-06 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 1e-06 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 1e-06 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 2e-06 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 2e-06 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 2e-06 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 2e-06 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 2e-06 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 2e-06 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 3e-06 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 3e-06 | |
| PLN00113 | 968 | PLN00113, PLN00113, leucine-rich repeat receptor-l | 5e-06 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 5e-06 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 5e-06 | |
| cd05627 | 360 | cd05627, STKc_NDR2, Catalytic domain of the Protei | 5e-06 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 6e-06 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 6e-06 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 6e-06 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 7e-06 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 7e-06 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 7e-06 | |
| PHA03212 | 391 | PHA03212, PHA03212, serine/threonine kinase US3; P | 7e-06 | |
| cd05107 | 401 | cd05107, PTKc_PDGFR_beta, Catalytic domain of the | 9e-06 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 9e-06 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 1e-05 | |
| cd05103 | 343 | cd05103, PTKc_VEGFR2, Catalytic domain of the Prot | 1e-05 | |
| PHA02882 | 294 | PHA02882, PHA02882, putative serine/threonine kina | 1e-05 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 1e-05 | |
| cd05628 | 363 | cd05628, STKc_NDR1, Catalytic domain of the Protei | 1e-05 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 2e-05 | |
| cd05035 | 273 | cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li | 2e-05 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 2e-05 | |
| PTZ00266 | 1021 | PTZ00266, PTZ00266, NIMA-related protein kinase; P | 2e-05 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 2e-05 | |
| cd05074 | 273 | cd05074, PTKc_Tyro3, Catalytic domain of the Prote | 2e-05 | |
| cd05077 | 262 | cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do | 3e-05 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 4e-05 | |
| cd05043 | 280 | cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece | 6e-05 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 7e-05 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 8e-05 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 1e-04 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 1e-04 | |
| cd00116 | 319 | cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribo | 2e-04 | |
| PLN03150 | 623 | PLN03150, PLN03150, hypothetical protein; Provisio | 3e-04 | |
| cd05076 | 274 | cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do | 3e-04 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 4e-04 | |
| cd05104 | 375 | cd05104, PTKc_Kit, Catalytic domain of the Protein | 7e-04 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 8e-04 | |
| COG5238 | 388 | COG5238, RNA1, Ran GTPase-activating protein (RanG | 8e-04 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 0.001 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 0.001 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 0.001 | |
| cd05598 | 376 | cd05598, STKc_LATS, Catalytic domain of the Protei | 0.002 | |
| cd05037 | 259 | cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom | 0.002 | |
| pfam13855 | 60 | pfam13855, LRR_8, Leucine rich repeat | 0.003 | |
| cd05625 | 382 | cd05625, STKc_LATS1, Catalytic domain of the Prote | 0.003 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 0.004 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 291 bits (746), Expect = 2e-86
Identities = 210/689 (30%), Positives = 329/689 (47%), Gaps = 53/689 (7%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N LSG IP V NL+ L+L+SN+ +G +P + +L +L L++ +N+ G+IP++L
Sbjct: 294 NSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLG 353
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
+L + L N+LTG I E NL L + N+ GEI S G C+ L +
Sbjct: 354 KHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQD 413
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N+ +G +P E KL ++ LD S N + G I ++ SL L L NK G LP G
Sbjct: 414 NSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG 473
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
S LE LDLS N+ SG++P LG+L ++ L LS N+ E P EL +L LDLSH
Sbjct: 474 S-KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSH 532
Query: 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTG 301
N L G+IP + L +L++S N LSG IP + L ++IS+N L G +P++
Sbjct: 533 NQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGA 592
Query: 302 FQYDPIQALRGNRGLCGD--VEGFQSCKAFVSQKHVFENKWFLIIIPILGVFALLFFV-I 358
F A+ GN LCG G CK W+ I LG F +L V
Sbjct: 593 FLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTP-----SWWFYITCTLGAFLVLALVAF 647
Query: 359 GIIFGRTKRTSKENKGSCENHRGLLSILTFEGK----IVYEEIIRATKNFDAEQCIGIGG 414
G +F R + + + EN G + F+ K I +I+ + K E I G
Sbjct: 648 GFVFIRGRNNLELKR--VENEDGTWELQFFDSKVSKSITINDILSSLKE---ENVISRGK 702
Query: 415 QASVYRGELPSGE----VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFC 470
+ + Y+G+ V + +S+ SEI+ + +++H NIVK G C
Sbjct: 703 KGASYKGKSIKNGMQFVVKEINDVNSIPSSEIA----------DMGKLQHPNIVKLIGLC 752
Query: 471 SHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVH 530
+ ++L++E +E +L+E+L N SW R + +A AL ++H C P +V
Sbjct: 753 RSEKGAYLIHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVVV 806
Query: 531 RDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF--GYVAPELAYTMKVTEKC 588
++S + +++ + E + L T+ YVAPE T +TEK
Sbjct: 807 GNLSPEKIIIDGKDEPHLR-------LSLPGLLCTDTKCFISSAYVAPETRETKDITEKS 859
Query: 589 DVYSFGVLALEVIKGKHPRDFISLLSSS------SSNMNLSLNEILDPRLPLPSRNIQDK 642
D+Y FG++ +E++ GK P D + S + L+ +DP + Q++
Sbjct: 860 DIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNE 919
Query: 643 LISILEVALLCLEESPESRPTMQTVCQLL 671
++ ++ +AL C P +RP V + L
Sbjct: 920 IVEVMNLALHCTATDPTARPCANDVLKTL 948
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 190 bits (483), Expect = 8e-51
Identities = 117/295 (39%), Positives = 158/295 (53%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N LSG IP +G+F++LK L L N L G +P + NL L L + +NQL GQIPR L
Sbjct: 150 NMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELG 209
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
+ SL ++L N+L+G I G +L LD+ +NN G I SS G + L L
Sbjct: 210 QMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQ 269
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N ++G IPP I L +L LD S N + GEIP + L++L L L N +G +P L
Sbjct: 270 NKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALT 329
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
SL L+ L L +NK SG IP+ LG + L+LS N E P L L +L L
Sbjct: 330 SLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFS 389
Query: 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLI 296
N L GEIP + SL ++ + N+ SG +PS F + + +DIS N L G I
Sbjct: 390 NSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRI 444
|
Length = 968 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 183 bits (467), Expect = 1e-48
Identities = 106/291 (36%), Positives = 154/291 (52%), Gaps = 3/291 (1%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLA-SLNRVHLE 72
N + + + L ++SG + I L + + + NNQL G IP + + SL ++L
Sbjct: 67 NSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLS 126
Query: 73 QNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEI 132
N+ TG+I G PNL LD+S+N GEI + G L L+ N + G IP +
Sbjct: 127 NNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSL 184
Query: 133 GKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLS 192
L L L + NQ+VG+IP ELG +KSL ++ L N LSG +P +G L+ L +LDL
Sbjct: 185 TNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLV 244
Query: 193 TNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQI 252
N L+G IP +LGNL + YL L N+ P + L +L LDLS N L GEIP +
Sbjct: 245 YNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELV 304
Query: 253 CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQ 303
L++LE L++ NN +G IP + L + + N+ G IP + G
Sbjct: 305 IQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKH 355
|
Length = 968 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 167 bits (425), Expect = 2e-47
Identities = 75/265 (28%), Positives = 117/265 (44%), Gaps = 14/265 (5%)
Query: 407 EQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVK 465
+ +G G +VY+ +G++VAVK + + EI+ L + H NIV+
Sbjct: 4 LRKLGSGSFGTVYKAKHKGTGKIVAVKIL-KKRSEKSKKDQTARREIRILRRLSHPNIVR 62
Query: 466 FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF 525
H +LV E E G L + LS G + E + + + L Y+H +
Sbjct: 63 LIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSE--DEAK-KIALQILRGLEYLHSN-- 117
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE-LAYTMKV 584
I+HRD+ +N+LL +++DFG+AK L SS+ T F GT Y+APE L
Sbjct: 118 -GIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGY 176
Query: 585 TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLI 644
K DV+S GV+ E++ GK P + + + IL P L
Sbjct: 177 GPKVDVWSLGVILYELLTGKPP-----FSGENILDQLQLIRRILGPPLEFDEPKWSSGSE 231
Query: 645 SILEVALLCLEESPESRPTMQTVCQ 669
++ CL + P RPT + + Q
Sbjct: 232 EAKDLIKKCLNKDPSKRPTAEEILQ 256
|
Length = 260 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 179 bits (455), Expect = 3e-47
Identities = 124/355 (34%), Positives = 176/355 (49%), Gaps = 26/355 (7%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N L G IP S+ N T+L+ L L SN L G +P E+G + L + + N L G+IP +
Sbjct: 174 NVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIG 233
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
L SLN + L N+LTG I G NL +L + N G I S Q+L +L+ S
Sbjct: 234 GLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSD 293
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N+++G IP + +L L L N G+IP+ L +L L L L NK SG +P+ LG
Sbjct: 294 NSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLG 353
Query: 182 SLSELEYLDLSTNKLSGSIPETL---GNLLKV---------------------HYLNLSN 217
+ L LDLSTN L+G IPE L GNL K+ + L +
Sbjct: 354 KHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQD 413
Query: 218 NQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFE 277
N F E P E KL + LD+S+N L G I + ++ SL+ L+++ N G +P F
Sbjct: 414 NSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF- 472
Query: 278 GMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCGDV-EGFQSCKAFVS 331
G L +D+S N+ G +P G + +Q L G++ + SCK VS
Sbjct: 473 GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVS 527
|
Length = 968 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 166 bits (423), Expect = 4e-47
Identities = 77/270 (28%), Positives = 126/270 (46%), Gaps = 24/270 (8%)
Query: 404 FDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQRE-FLNEIKALTEIRHR 461
++ + +G G VY + +G++VA+K +I RE L EIK L +++H
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIK---KKKIKKDRERILREIKILKKLKHP 57
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH 521
NIV+ Y +LV E E G L ++L G + E ++ + +AL Y+H
Sbjct: 58 NIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSE-DEARF--YLRQILSALEYLH 114
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT 581
IVHRD+ +N+LL + +++DFG+A+ L PG T F GT Y+APE+
Sbjct: 115 SKG---IVHRDLKPENILLDEDGHVKLADFGLARQLDPGEKLTT-FVGTPEYMAPEVLLG 170
Query: 582 MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR--NI 639
+ D++S GV+ E++ GK P F + +I P+ P P +I
Sbjct: 171 KGYGKAVDIWSLGVILYELLTGKPP--F-----PGDDQLLELFKKIGKPKPPFPPPEWDI 223
Query: 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669
+ ++ L + PE R T + Q
Sbjct: 224 SPEAKDLIR---KLLVKDPEKRLTAEEALQ 250
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 175 bits (444), Expect = 8e-46
Identities = 107/299 (35%), Positives = 157/299 (52%), Gaps = 5/299 (1%)
Query: 3 HLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNL-MQLTNLEIDNNQLFGQIPR-SL 60
++SG I ++ ++ + L +N LSG +P +I L L + NN G IPR S+
Sbjct: 80 NISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSI 139
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFS 120
NL +L+ L N L+G I G + +L LD+ N G+I +S L L +
Sbjct: 140 PNLETLD---LSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLA 196
Query: 121 MNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVL 180
N + G IP E+G++ L + N + GEIP E+G L SLN+L L N L+G +P L
Sbjct: 197 SNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSL 256
Query: 181 GSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLS 240
G+L L+YL L NKLSG IP ++ +L K+ L+LS+N E P + +L L L L
Sbjct: 257 GNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLF 316
Query: 241 HNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNS 299
N G+IP + +L L+ L + N SG IP + L+ +D+S N L G IP
Sbjct: 317 SNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEG 375
|
Length = 968 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 152 bits (386), Expect = 2e-42
Identities = 70/223 (31%), Positives = 108/223 (48%), Gaps = 13/223 (5%)
Query: 410 IGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
+G GG +VY +G+ VA+K S + E L EI+ L ++ H NIVK YG
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLL--EELLREIEILKKLNHPNIVKLYG 58
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPI 528
H +LV E E GSL ++L + + S ++ + L Y+H + I
Sbjct: 59 VFEDENHLYLVMEYCEGGSLKDLLKENE--GKLSEDEILRILLQILEGLEYLHSN---GI 113
Query: 529 VHRDISSKNVLLSS-EYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE-LAYTMKVTE 586
+HRD+ +N+LL S + +++DFG++K L S GT Y+APE L +E
Sbjct: 114 IHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSE 173
Query: 587 KCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD 629
K D++S GV+ E+ + K D I + S EIL+
Sbjct: 174 KSDIWSLGVILYELPELK---DLIRKMLQKDPEKRPSAKEILE 213
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 140 bits (355), Expect = 1e-37
Identities = 82/273 (30%), Positives = 132/273 (48%), Gaps = 30/273 (10%)
Query: 404 FDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN 462
F+ + IG GG VY+ +G+ VA+K L + + +NEI+ L + +H N
Sbjct: 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIK---LESKEKKEKIINEIQILKKCKHPN 58
Query: 463 IVKFYGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSYMH 521
IVK+YG ++V E GSL ++L S + ++ E S I V K + L Y+H
Sbjct: 59 IVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTE-SQI--AYVCKELLKGLEYLH 115
Query: 522 --HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELA 579
I+HRDI + N+LL+S+ E ++ DFG++ L + GT ++APE+
Sbjct: 116 SNG-----IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKAR-NTMVGTPYWMAPEVI 169
Query: 580 YTMKVTEKCDVYSFGVLALEVIKGKHP-RDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638
K D++S G+ A+E+ +GK P + + + N P L P +
Sbjct: 170 NGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGP------PGLRNPEKW 223
Query: 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
D+ L+ CL+++PE RP T QLL
Sbjct: 224 -SDEFKDFLK---KCLQKNPEKRP---TAEQLL 249
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 139 bits (352), Expect = 3e-37
Identities = 71/284 (25%), Positives = 112/284 (39%), Gaps = 55/284 (19%)
Query: 410 IGIGGQASVYRGEL-----PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIV 464
+G G VY+G+L VAVK + EFL E + + ++ H N+V
Sbjct: 7 LGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKED--ASEQQIEEFLREARIMRKLDHPNVV 64
Query: 465 KFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDC 524
K G C+ ++V E +E G L L + + S + +A + Y+
Sbjct: 65 KLLGVCTEEEPLYIVMEYMEGGDLLSYLRK--NRPKLSLSDLLSFALQIARGMEYLESK- 121
Query: 525 FPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN----------WTEFAGTFGYV 574
+HRD++++N L+ ++SDFG+++ L W
Sbjct: 122 --NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPIRWM--------- 170
Query: 575 APELAYTMKVTEKCDVYSFGVLALEVI-------KGKHPRDFISLLSSSSSNMNLSLNEI 627
APE K T K DV+SFGVL E+ G + + L +
Sbjct: 171 APESLKEGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGY---------- 220
Query: 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
RLP P N +L ++ L C E PE RPT + ++L
Sbjct: 221 ---RLPQPP-NCPPELYDLM---LQCWAEDPEDRPTFSELVEIL 257
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 139 bits (352), Expect = 4e-37
Identities = 75/285 (26%), Positives = 111/285 (38%), Gaps = 56/285 (19%)
Query: 410 IGIGGQASVYRGEL-----PSGEVVAVKKFHSLLLSEISVQR-EFLNEIKALTEIRHRNI 463
+G G VY+G L VAVK L Q EFL E + + ++ H NI
Sbjct: 7 LGEGAFGEVYKGTLKGKGDGKEVEVAVKT---LKEDASEQQIEEFLREARIMRKLDHPNI 63
Query: 464 VKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHD 523
VK G C+ +V E + G L + L + KE S + +A + Y+
Sbjct: 64 VKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESK 122
Query: 524 CFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN----------WTEFAGTFGY 573
+HRD++++N L+ ++SDFG+++ L W
Sbjct: 123 ---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPIRWM-------- 171
Query: 574 VAPELAYTMKVTEKCDVYSFGVLALEVI-------KGKHPRDFISLLSSSSSNMNLSLNE 626
APE K T K DV+SFGVL E+ G + + L
Sbjct: 172 -APESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGY--------- 221
Query: 627 ILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
RLP P N +L ++ L C E PE RPT + ++L
Sbjct: 222 ----RLPKPP-NCPPELYKLM---LQCWAEDPEDRPTFSELVEIL 258
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 138 bits (350), Expect = 8e-37
Identities = 72/291 (24%), Positives = 117/291 (40%), Gaps = 61/291 (20%)
Query: 410 IGIG--GQASVYRGEL---PSGEV-VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNI 463
+G G G+ VY+G+L VAVK + +++FL E + + ++ H N+
Sbjct: 3 LGEGAFGE--VYKGKLKGKDGKTTEVAVKTLKED--ASEEERKDFLKEARVMKKLGHPNV 58
Query: 464 VKFYGFCSHPRHSFLVYECLERGSL------AEILSNDGSIKEFSWIVRTNVIKSVANAL 517
V+ G C+ +LV E +E G L + + S + +A +
Sbjct: 59 VRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGM 118
Query: 518 SYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN-----------WTE 566
Y+ VHRD++++N L+ + ++SDFG+++ + W
Sbjct: 119 EYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWM- 174
Query: 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLN 625
APE T K DV+SFGVL E+ G P LS
Sbjct: 175 --------APESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYP------------GLSNE 214
Query: 626 EILDP-----RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
E+L+ RLP P D+L ++ L C + PE RPT + + L
Sbjct: 215 EVLEYLRKGYRLPKPE-YCPDELYELM---LSCWQLDPEDRPTFSELVERL 261
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 1e-36
Identities = 76/269 (28%), Positives = 124/269 (46%), Gaps = 28/269 (10%)
Query: 409 CIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFY 467
+G G VY+ P+G++ A+KK H + + +++ L E+K L +VK Y
Sbjct: 8 VLGQGSSGVVYKVRHKPTGKIYALKKIH--VDGDEEFRKQLLRELKTLRSCESPYVVKCY 65
Query: 468 GFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA----NALSYMHHD 523
G +V E ++ GSLA++L G I E V+ +A L Y+H
Sbjct: 66 GAFYKEGEISIVLEYMDGGSLADLLKKVGKIPE-------PVLAYIARQILKGLDYLHTK 118
Query: 524 CFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMK 583
I+HRDI N+L++S+ E +++DFGI+K L+ F GT Y++PE
Sbjct: 119 --RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGES 176
Query: 584 VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD-PRLPLPSRNIQDK 642
+ D++S G+ LE GK P F+ S + + I D P LP+ +
Sbjct: 177 YSYAADIWSLGLTLLECALGKFP--FLPPGQPSFFEL---MQAICDGPPPSLPAEEFSPE 231
Query: 643 LISILEVALLCLEESPESRPTMQTVCQLL 671
+ CL++ P+ RP+ +LL
Sbjct: 232 FRDFIS---ACLQKDPKKRPSAA---ELL 254
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 4e-36
Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 38/276 (13%)
Query: 408 QCIGIGGQASVYRGELP-SGEVVAVKK--FHSLLLSEISVQREFLNEIKALTEIRHRNIV 464
+ +G G SVY +GE++AVK E+ EI+ L+ ++H NIV
Sbjct: 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEEL---EALEREIRILSSLQHPNIV 62
Query: 465 KFYGFCSHPRHSFL--VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVAN----ALS 518
++YG + L E + GSL+ +L G + E VI+ L+
Sbjct: 63 RYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPE-------PVIRKYTRQILEGLA 115
Query: 519 YMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE--FAGTFGYVA 575
Y+H + IVHRDI N+L+ S+ +++DFG AK L + GT ++A
Sbjct: 116 YLHSNG----IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMA 171
Query: 576 PELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635
PE+ + D++S G +E+ GK P S L + + + + P +P
Sbjct: 172 PEVIRGEEYGRAADIWSLGCTVIEMATGKPP---WSELGNPMAALYKIGSSGEPPEIP-- 226
Query: 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
++ ++ L CL P+ RP T +LL
Sbjct: 227 -EHLSEEAKDFLR---KCLRRDPKKRP---TADELL 255
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 135 bits (343), Expect = 6e-36
Identities = 68/279 (24%), Positives = 111/279 (39%), Gaps = 60/279 (21%)
Query: 418 VYRGEL-----PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH 472
VY+G L + VAVK + + EFL E + ++ H NIV+ G C+
Sbjct: 15 VYKGTLKGDGEGTETKVAVKTLKEG--ASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQ 72
Query: 473 PRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSYMH-HDCFPPIVH 530
++V E + G L + L + + ++ + +A + Y+ + VH
Sbjct: 73 GEPLYIVTEYMPGGDLLDFLRKHGEKLT-LKDLL--QMALQIAKGMEYLESKNF----VH 125
Query: 531 RDISSKNVLLSSEYEARVSDFGIAKFLKPGSS-----------NWTEFAGTFGYVAPELA 579
RD++++N L++ ++SDFG+++ + W APE
Sbjct: 126 RDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWM---------APESL 176
Query: 580 YTMKVTEKCDVYSFGVLALEVI-------KGKHPRDFISLLSSSSSNMNLSLNEILDPRL 632
K T K DV+SFGVL E+ G + + LL RL
Sbjct: 177 KDGKFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEVLELLED-------------GYRL 223
Query: 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
P P N D+L ++ L C PE RPT + + L
Sbjct: 224 PRP-ENCPDELYELM---LQCWAYDPEDRPTFSELVEDL 258
|
Length = 258 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 116 bits (294), Expect = 2e-29
Identities = 72/268 (26%), Positives = 121/268 (45%), Gaps = 19/268 (7%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
N+ IG G VY+G L +G+ VA+K+ + E + + EI L ++H
Sbjct: 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKE-EALKSIMQEIDLLKNLKHP 59
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH 521
NIVK+ G +++ E E GSL +I+ G E V + V L+Y+H
Sbjct: 60 NIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAV---YVYQVLQGLAYLH 116
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT 581
++HRDI + N+L + + +++DFG+A L S + GT ++APE+
Sbjct: 117 EQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEM 173
Query: 582 MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641
+ D++S G +E++ G P + L M + D PLP I
Sbjct: 174 SGASTASDIWSLGCTVIELLTGNPP--YYDLNP-----MAALFRIVQDDHPPLPE-GISP 225
Query: 642 KLISILEVALLCLEESPESRPTMQTVCQ 669
+L L + C ++ P RPT + + +
Sbjct: 226 ELKDFL---MQCFQKDPNLRPTAKQLLK 250
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 2e-28
Identities = 72/284 (25%), Positives = 123/284 (43%), Gaps = 46/284 (16%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQRE--FLNEIKALTE 457
+ + + IG G VY+ + +G+ VA+KK + Q + +NEI + +
Sbjct: 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMR------LRKQNKELIINEILIMKD 71
Query: 458 IRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILS-NDGSIKEFSWIVRTNVIKSVANA 516
+H NIV +Y ++V E ++ GSL +I++ N + E I V + V
Sbjct: 72 CKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNE-PQIAY--VCREVLQG 128
Query: 517 LSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAP 576
L Y+H ++HRDI S N+LLS + +++DFG A L S GT ++AP
Sbjct: 129 LEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAP 185
Query: 577 ELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN---------LSLNEI 627
E+ K D++S G++ +E+ +G+ P + ++ I
Sbjct: 186 EVIKRKDYGPKVDIWSLGIMCIEMAEGEPPY------------LREPPLRALFLITTKGI 233
Query: 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
P L + L CL + PE RP+ + +LL
Sbjct: 234 --PPLK-NPEKWSPEFKDFLN---KCLVKDPEKRPSAE---ELL 268
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 116 bits (291), Expect = 3e-28
Identities = 71/274 (25%), Positives = 121/274 (44%), Gaps = 17/274 (6%)
Query: 403 NFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH-R 461
++ + +G G VY ++VA+K L S+ FL EI+ L + H
Sbjct: 1 SYRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPP 58
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH 521
NIVK Y F +LV E ++ GSL ++L G S ++ + +AL Y+H
Sbjct: 59 NIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118
Query: 522 HDCFPPIVHRDISSKNVLLSSEY-EARVSDFGIAKFLKPGSSN------WTEFAGTFGYV 574
I+HRDI +N+LL + ++ DFG+AK L S + GT GY+
Sbjct: 119 SKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYM 175
Query: 575 APELAYTM---KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631
APE+ + + D++S G+ E++ G P + S++S + + L
Sbjct: 176 APEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSL 235
Query: 632 L-PLPSRNIQDKLISILEVALLCLEESPESRPTM 664
PL N + + ++ L + P++R +
Sbjct: 236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSS 269
|
Length = 384 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 107 bits (270), Expect = 4e-26
Identities = 82/272 (30%), Positives = 126/272 (46%), Gaps = 41/272 (15%)
Query: 410 IGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG+G A VY LP+ E VA+K+ L + SV E E++A+++ H N+VK+Y
Sbjct: 9 IGVGATAVVYAAICLPNNEKVAIKRI-DLEKCQTSVD-ELRKEVQAMSQCNHPNVVKYYT 66
Query: 469 FCSHPRHSFLVYECL-------ERGSLAEILS---NDGSIKEFSWIVRTNVIKSVANALS 518
SF+V + L GSL +I+ G + E I+ T V+K V L
Sbjct: 67 -------SFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEA--IIAT-VLKEVLKGLE 116
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL-KPGSSNW---TEFAGTFGYV 574
Y+H + +HRDI + N+LL + +++DFG++ L G F GT ++
Sbjct: 117 YLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWM 173
Query: 575 APELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633
APE+ + K D++SFG+ A+E+ G P S M N+ P L
Sbjct: 174 APEVMEQVHGYDFKADIWSFGITAIELATGAAP---YSKYPPMKVLMLTLQND--PPSLE 228
Query: 634 LPSRNIQDKLISIL--EVALLCLEESPESRPT 663
K S ++ LCL++ P RPT
Sbjct: 229 ---TGADYKKYSKSFRKMISLCLQKDPSKRPT 257
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 5e-26
Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 43/283 (15%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
++ + IG G VY G++ +K+ +SE + + LNE+K L ++ H
Sbjct: 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKE-REDALNEVKILKKLNHP 59
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEF-------SWIVRTNVIKSVA 514
NI+K+Y +V E + G L++ + + W V+ +
Sbjct: 60 NIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQ------LC 113
Query: 515 NALSYMH--HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF- 571
AL Y+H I+HRDI +N+ L+S ++ DFGI+K L S+ + A T
Sbjct: 114 LALKYLHSRK-----ILHRDIKPQNIFLTSNGLVKLGDFGISKVL----SSTVDLAKTVV 164
Query: 572 G---YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEIL 628
G Y++PEL K D++S G + E+ KHP F N+ +IL
Sbjct: 165 GTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHP--F------EGENLLELALKIL 216
Query: 629 D-PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670
P+PS+ + L +++ L++ PE RP++ + Q
Sbjct: 217 KGQYPPIPSQYSSE-LRNLVS---SLLQKDPEERPSIAQILQS 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 6e-25
Identities = 74/273 (27%), Positives = 125/273 (45%), Gaps = 40/273 (14%)
Query: 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGF 469
+G G V+ G+ VA+K +SE +F+ E K + ++ H N+V+ YG
Sbjct: 12 LGSGQFGVVHLGKWRGKIDVAIKMIREGAMSE----DDFIEEAKVMMKLSHPNLVQLYGV 67
Query: 470 CSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIV 529
C+ R F+V E + G L L W++ ++ V A+ Y+ + F +
Sbjct: 68 CTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLL--DMCSDVCEAMEYLESNGF---I 122
Query: 530 HRDISSKNVLLSSEYEARVSDFGIAKFL---KPGSSNWTEFAGTFGYVAPELAYTMKVTE 586
HRD++++N L+ + +VSDFG+A+++ + SS T+F + PE+ + +
Sbjct: 123 HRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFP--VKWAPPEVFDYSRFSS 180
Query: 587 KCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDP-----RLPLPSRNIQ 640
K DV+SFGVL EV +GK P + S +E+++ RL P
Sbjct: 181 KSDVWSFGVLMWEVFSEGKMPYE------------RFSNSEVVESVSAGYRLYRP----- 223
Query: 641 DKLIS--ILEVALLCLEESPESRPTMQTVCQLL 671
KL + + C E PE RP + + L
Sbjct: 224 -KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 3e-24
Identities = 80/268 (29%), Positives = 130/268 (48%), Gaps = 46/268 (17%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFH----SLLLSEISVQREFLNEIKALTEIRH---R 461
IG G +VYRG +P+G VVA+K + +S+I QRE + L+++R
Sbjct: 9 IGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDI--QRE----VALLSQLRQSQPP 62
Query: 462 NIVKFYG-FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM 520
NI K+YG + PR +++ E E GS+ L G I E V +I+ V AL Y+
Sbjct: 63 NITKYYGSYLKGPR-LWIIMEYAEGGSV-RTLMKAGPIAEKYISV---IIREVLVALKYI 117
Query: 521 HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL-- 578
H ++HRDI + N+L+++ ++ DFG+A L SS + F GT ++APE+
Sbjct: 118 HKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVIT 174
Query: 579 ---AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635
Y K D++S G+ E+ G P + + M L + + PRL
Sbjct: 175 EGKYYDTKA----DIWSLGITIYEMATGNPPYSDVDAFRA----MML-IPKSKPPRLEDN 225
Query: 636 --SRNIQDKLISILEVALLCLEESPESR 661
S+ +++ + + CL+E P+ R
Sbjct: 226 GYSKLLREFVAA-------CLDEEPKER 246
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 4e-24
Identities = 70/210 (33%), Positives = 112/210 (53%), Gaps = 19/210 (9%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQRE------FLNEIKALTEIRHRN 462
IG G SVY G SGE++AVK+ +S S R+ EI L E++H N
Sbjct: 8 IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67
Query: 463 IVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH 522
IV++ G H + E + GS+A +L+N G+ +E +VR N ++ + L+Y+H+
Sbjct: 68 IVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEET--LVR-NFVRQILKGLNYLHN 124
Query: 523 DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT------EFAGTFGYVAP 576
I+HRDI N+L+ ++ ++SDFGI+K L+ S + G+ ++AP
Sbjct: 125 R---GIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAP 181
Query: 577 ELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
E+ T K D++S G L +E++ GKHP
Sbjct: 182 EVVKQTSYTRKADIWSLGCLVVEMLTGKHP 211
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 4e-24
Identities = 70/285 (24%), Positives = 134/285 (47%), Gaps = 49/285 (17%)
Query: 399 RATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI 458
R + F E+ +G G V+ G + VA+K S ++ Q++F E++AL +
Sbjct: 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKS---DDLLKQQDFQKEVQALKRL 59
Query: 459 RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSN-DGSIKEFSWIVRTNVIKSVANAL 517
RH++++ + CS +++ E +E+GSL L + +G + + ++ ++ VA +
Sbjct: 60 RHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLI--DMACQVAEGM 117
Query: 518 SYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK-----PGSSN----WTEFA 568
+Y+ +HRD++++N+L+ + +V+DFG+A+ +K WT
Sbjct: 118 AYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYKWT--- 171
Query: 569 GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEI 627
APE A + K DV+SFG+L E+ G+ P ++ +E+
Sbjct: 172 ------APEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYP------------GMNNHEV 213
Query: 628 LDP-----RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTV 667
D R+P P++ Q I ++ L C PE RP+ + +
Sbjct: 214 YDQITAGYRMPCPAKCPQ----EIYKIMLECWAAEPEDRPSFKAL 254
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 6e-24
Identities = 79/277 (28%), Positives = 137/277 (49%), Gaps = 31/277 (11%)
Query: 407 EQCIGIGGQASVYRG--ELPSGEV--VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN 462
E+ IG G V RG +LP + VA+K + S + +FL E + + H N
Sbjct: 9 EKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAG--SSDKQRLDFLTEASIMGQFDHPN 66
Query: 463 IVKFYGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSYMH 521
I++ G + R ++ E +E GSL + L NDG +F+ +++ +A+ + Y+
Sbjct: 67 IIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDG---KFTVGQLVGMLRGIASGMKYLS 123
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFG--YVAPE-L 578
+ VHRD++++N+L++S +VSDFG+++ L+ + +T G + APE +
Sbjct: 124 EMNY---VHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAI 180
Query: 579 AYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPS 636
AY K T DV+SFG++ EV+ G+ P SN ++ + + D RLP P
Sbjct: 181 AYR-KFTSASDVWSFGIVMWEVMSYGERP-------YWDMSNQDV-IKAVEDGYRLPPP- 230
Query: 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673
D ++ ++ L C ++ RPT + L K
Sbjct: 231 ---MDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK 264
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 2e-23
Identities = 77/278 (27%), Positives = 116/278 (41%), Gaps = 44/278 (15%)
Query: 410 IGIGGQASVYRG--ELPSGEV--VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVK 465
+G G SV +G + SG+ VAVK + ++EFL E + ++ H IV+
Sbjct: 3 LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQE--HIAAGKKEFLREASVMAQLDHPCIVR 60
Query: 466 FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF 525
G C LV E G L + L I + VA ++Y+ F
Sbjct: 61 LIGVCKGEPL-MLVMELAPLGPLLKYLKKRREIPV---SDLKELAHQVAMGMAYLESKHF 116
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFG-----YVAPELAY 580
VHRD++++NVLL + ++A++SDFG+++ L GS + A T G + APE
Sbjct: 117 ---VHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR--ATTAGRWPLKWYAPECIN 171
Query: 581 TMKVTEKCDVYSFGVLALEVI-------KGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633
K + K DV+S+GV E + I++L S RLP
Sbjct: 172 YGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE-------------RLP 218
Query: 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
P Q I + L C + PE RPT +
Sbjct: 219 RPEECPQ----EIYSIMLSCWKYRPEDRPTFSELESTF 252
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 99.4 bits (248), Expect = 3e-23
Identities = 78/269 (28%), Positives = 118/269 (43%), Gaps = 39/269 (14%)
Query: 410 IGIGGQASVYRGEL--PSGEV--VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVK 465
+G G V RGE G+V VAVK S LS+I +FL E + + H N+++
Sbjct: 3 LGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDI--MDDFLKEAAIMHSLDHENLIR 60
Query: 466 FYGFC-SHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDC 524
YG +HP +V E GSL + L D + F + +AN + Y+
Sbjct: 61 LYGVVLTHP--LMMVTELAPLGSLLDRLRKDA-LGHFLISTLCDYAVQIANGMRYLESKR 117
Query: 525 FPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT---FGYVAPELAYT 581
F +HRD++++N+LL+S+ + ++ DFG+ + L ++ F + APE T
Sbjct: 118 F---IHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRT 174
Query: 582 MKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILD------PRLPL 634
+ DV+ FGV E+ G+ P + L S +IL RL
Sbjct: 175 RTFSHASDVWMFGVTLWEMFTYGEEP--WAGLSGS----------QILKKIDKEGERLER 222
Query: 635 PSRNIQDKLISILEVALLCLEESPESRPT 663
P QD I V L C +P RPT
Sbjct: 223 PEACPQD----IYNVMLQCWAHNPADRPT 247
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 98.4 bits (245), Expect = 5e-23
Identities = 75/268 (27%), Positives = 127/268 (47%), Gaps = 30/268 (11%)
Query: 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGF 469
+G G V+ G+ + VA+K + +SE +F+ E K + ++ H +V+ YG
Sbjct: 12 LGSGQFGVVHLGKWRAQIKVAIKAINEGAMSE----EDFIEEAKVMMKLSHPKLVQLYGV 67
Query: 470 CSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIV 529
C+ + ++V E +E G L L + S + ++ + V + Y+ + F +
Sbjct: 68 CTQQKPLYIVTEFMENGCLLNYLRQRQG--KLSKDMLLSMCQDVCEGMEYLERNSF---I 122
Query: 530 HRDISSKNVLLSSEYEARVSDFGIAKFL---KPGSSNWTEFAGTFGYVAPELAYTMKVTE 586
HRD++++N L+SS +VSDFG+ +++ + SS+ +F + PE+ K +
Sbjct: 123 HRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFP--VKWSPPEVFNFSKYSS 180
Query: 587 KCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645
K DV+SFGVL EV +GK P + SN + RL P KL S
Sbjct: 181 KSDVWSFGVLMWEVFTEGKMPFE-------KKSNYEVVEMISRGFRLYRP------KLAS 227
Query: 646 --ILEVALLCLEESPESRPTMQTVCQLL 671
+ EV C E PE RPT + + +
Sbjct: 228 MTVYEVMYSCWHEKPEGRPTFAELLRAI 255
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 98.1 bits (245), Expect = 9e-23
Identities = 79/271 (29%), Positives = 125/271 (46%), Gaps = 40/271 (14%)
Query: 404 FDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLN-EIKALTEIRHR 461
F +CIG G VY+ + + +VVA+K L E + E + EI+ L++ R
Sbjct: 3 FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVID---LEEAEDEIEDIQQEIQFLSQCRSP 59
Query: 462 NIVKFYGFCSHPRHSFL-------VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA 514
I K+YG SFL + E GS ++L G + E +++ V
Sbjct: 60 YITKYYG-------SFLKGSKLWIIMEYCGGGSCLDLLKP-GKLDETYIAF---ILREVL 108
Query: 515 NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYV 574
L Y+H + +HRDI + N+LLS E + +++DFG++ L S F GT ++
Sbjct: 109 LGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWM 165
Query: 575 APELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634
APE+ EK D++S G+ A+E+ KG+ P S L + N P L
Sbjct: 166 APEVIKQSGYDEKADIWSLGITAIELAKGEPPL---SDLHPMRVLFLIPKNNP--PSLEG 220
Query: 635 P--SRNIQDKLISILEVALLCLEESPESRPT 663
S+ +D +S LCL + P+ RP+
Sbjct: 221 NKFSKPFKD-FVS------LCLNKDPKERPS 244
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 97.9 bits (244), Expect = 1e-22
Identities = 60/198 (30%), Positives = 96/198 (48%), Gaps = 22/198 (11%)
Query: 408 QCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFY 467
IG G V G+ G+ VAVK L + + + FL E +T +RH N+V+
Sbjct: 12 ATIGKGEFGDVMLGDY-RGQKVAVKC----LKDDSTAAQAFLAEASVMTTLRHPNLVQLL 66
Query: 468 GFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIK---SVANALSYMHHDC 524
G ++V E + +GSL + L + G + I + V + Y+
Sbjct: 67 GVVLQGNPLYIVTEYMAKGSLVDYLRSRGR----AVITLAQQLGFALDVCEGMEYLEEKN 122
Query: 525 FPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF--GYVAPELAYTM 582
F VHRD++++NVL+S + A+VSDFG+AK ++ + +G + APE
Sbjct: 123 F---VHRDLAARNVLVSEDLVAKVSDFGLAK-----EASQGQDSGKLPVKWTAPEALREK 174
Query: 583 KVTEKCDVYSFGVLALEV 600
K + K DV+SFG+L E+
Sbjct: 175 KFSTKSDVWSFGILLWEI 192
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 95.3 bits (237), Expect = 8e-22
Identities = 80/279 (28%), Positives = 137/279 (49%), Gaps = 32/279 (11%)
Query: 407 EQCIGIGGQASVYRGEL-PSGE---VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN 462
E+ IG G V RG L G+ VA+K S + +R+FL+E + + H N
Sbjct: 9 EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEK--QRRDFLSEASIMGQFDHPN 66
Query: 463 IVKFYGFCSHPRHSFLVYECLERGSLAEILS-NDGSIKEFSWIVRTNVIKSVANALSYMH 521
I+ G + R ++ E +E G+L L NDG +F+ I +++ +A + Y+
Sbjct: 67 IIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDG---QFTVIQLVGMLRGIAAGMKYLS 123
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFG-----YVAP 576
+ VHRD++++N+L++S +VSDFG+++FL+ +S+ T + G + AP
Sbjct: 124 EMNY---VHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAP 180
Query: 577 ELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEI-LDPRLPL 634
E K T DV+S+G++ EV+ G+ P SN ++ +N I D RLP
Sbjct: 181 EAIAYRKFTSASDVWSYGIVMWEVMSYGERP-------YWDMSNQDV-INAIEQDYRLPP 232
Query: 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673
P D ++ ++ L C ++ +RP + L K
Sbjct: 233 P----MDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDK 267
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 95.0 bits (236), Expect = 8e-22
Identities = 75/264 (28%), Positives = 125/264 (47%), Gaps = 34/264 (12%)
Query: 408 QCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFY 467
Q IG G V+ G VA+K +SE +F+ E + + ++ H +V+ Y
Sbjct: 10 QEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSE----EDFIEEAQVMMKLSHPKLVQLY 65
Query: 468 GFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFP 526
G C+ LV+E +E G L++ L + G FS + V ++Y+
Sbjct: 66 GVCTERSPICLVFEFMEHGCLSDYLRAQRGK---FSQETLLGMCLDVCEGMAYLESSNV- 121
Query: 527 PIVHRDISSKNVLLSSEYEARVSDFGIAKFL---KPGSSNWTEFAGTFGYVAPELAYTMK 583
+HRD++++N L+ +VSDFG+ +F+ + SS T+F + +PE+ K
Sbjct: 122 --IHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFP--VKWSSPEVFSFSK 177
Query: 584 VTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLN---EILDPRLPLPSRNI 639
+ K DV+SFGVL EV +GK P + + S+S + ++N + PRL
Sbjct: 178 YSSKSDVWSFGVLMWEVFSEGKTPYE-----NRSNSEVVETINAGFRLYKPRLASQ---- 228
Query: 640 QDKLISILEVALLCLEESPESRPT 663
S+ E+ C +E PE RP+
Sbjct: 229 -----SVYELMQHCWKERPEDRPS 247
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 95.0 bits (236), Expect = 1e-21
Identities = 76/275 (27%), Positives = 136/275 (49%), Gaps = 26/275 (9%)
Query: 407 EQCIGIGGQASVYRG--ELPSGEVVAVKKFHSLLLSEISVQR-EFLNEIKALTEIRHRNI 463
++ IG G V+RG ++P + VAV +L QR +FL+E + + H NI
Sbjct: 10 QKVIGAGEFGEVFRGILKMPGRKEVAVA-IKTLKPGYTEKQRQDFLSEASIMGQFSHHNI 68
Query: 464 VKFYGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSYMHH 522
++ G + + + ++ E +E G+L + L +DG EFS +++ +A + Y+
Sbjct: 69 IRLEGVVTKFKPAMIITEYMENGALDKYLRDHDG---EFSSYQLVGMLRGIAAGMKYLSD 125
Query: 523 DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG-SSNWTEFAGTFG--YVAPELA 579
+ VHRD++++N+L++S E +VSDFG+++ L+ +T G + APE
Sbjct: 126 MNY---VHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAI 182
Query: 580 YTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638
K T DV+SFG++ EV+ G+ P S+ + ++N+ RLP P
Sbjct: 183 AYRKFTSASDVWSFGIVMWEVMSFGERP-----YWDMSNHEVMKAINDGF--RLPAP--- 232
Query: 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673
D ++ ++ L C ++ RP + LL K
Sbjct: 233 -MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK 266
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 94.9 bits (236), Expect = 1e-21
Identities = 77/271 (28%), Positives = 123/271 (45%), Gaps = 36/271 (13%)
Query: 408 QCIGIGGQASVYRG-ELPSGEVVAVK--KFHSLLLSEIS-VQREFLNEIKALTEIRHRNI 463
Q +G G +S Y+ ++ +G ++AVK + SE V EI+ + + H +I
Sbjct: 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHI 65
Query: 464 VKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHD 523
++ G H L E + GS++ +LS G+ KE V N + + LSY+H +
Sbjct: 66 IRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKE---AVIINYTEQLLRGLSYLHEN 122
Query: 524 CFPPIVHRDISSKNVLL-SSEYEARVSDFGIAKFLKPGSSNWTEFA----GTFGYVAPEL 578
I+HRD+ N+L+ S+ R++DFG A L + EF GT ++APE+
Sbjct: 123 ---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEV 179
Query: 579 AYTMKVTEKCDVYSFGVLALEVIKGKHP--RDFIS-----LLSSSSSNMNLSLNEILDPR 631
+ CDV+S G + +E+ K P + S + +S+ S+ E L P
Sbjct: 180 LRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPG 239
Query: 632 LPLPSRNIQDKLISILEVALLCLEESPESRP 662
L +V L CLE PE RP
Sbjct: 240 LR--------------DVTLRCLELQPEDRP 256
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 94.7 bits (236), Expect = 1e-21
Identities = 77/274 (28%), Positives = 117/274 (42%), Gaps = 47/274 (17%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFL-------NEIKALTEIRHR 461
IG G VY L +GE++AVK EI +Q +E+K L ++H
Sbjct: 8 IGGGTFGKVYTAVNLDTGELMAVK--------EIRIQDNDPKTIKEIADEMKVLELLKHP 59
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVAN----AL 517
N+VK+YG H ++ E G+L E+L + + E +VI+ L
Sbjct: 60 NLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDE-------HVIRVYTLQLLEGL 112
Query: 518 SYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE----FAGTFGY 573
+Y+H IVHRDI N+ L ++ DFG A LK ++ E AGT Y
Sbjct: 113 AYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAY 169
Query: 574 VAPELAYTMKVTEK---CDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP 630
+APE+ K D++S G + LE+ GK P S + + +
Sbjct: 170 MAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRP------WSELDNEFQIMFHVGAGH 223
Query: 631 RLPLPSRN-IQDKLISILEVALLCLEESPESRPT 663
+ P+P + + L+ CLE P+ RPT
Sbjct: 224 KPPIPDSLQLSPEGKDFLD---RCLESDPKKRPT 254
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 94.7 bits (236), Expect = 1e-21
Identities = 74/275 (26%), Positives = 124/275 (45%), Gaps = 41/275 (14%)
Query: 404 FDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN 462
++ Q IG G VY+ ++ +GE+VA+K + L EI L E RH N
Sbjct: 5 YELIQRIGSGTYGDVYKARDIATGELVAIK---VIKLEPGDDFEIIQQEISMLKECRHPN 61
Query: 463 IVKFYGFCSHPRHSFL--VYECLERGSLAEILS-NDGSIKE--FSWIVRTNVIKSVANAL 517
IV ++G S+ R L V E GSL +I G + E +++ R L
Sbjct: 62 IVAYFG--SYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCR-----ETLKGL 114
Query: 518 SYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE 577
+Y+H +HRDI N+LL+ + + +++DFG++ L + F GT ++APE
Sbjct: 115 AYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPE 171
Query: 578 LA---YTMKVTEKCDVYSFGVLALEVIKGK------HPRDFISLLSSSSSNMNLSLNEIL 628
+A KCD+++ G+ A+E+ + + HP + L+S S+
Sbjct: 172 VAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFP--------- 222
Query: 629 DPRLPLPSRNIQDKLISILEVALLCLEESPESRPT 663
P+L + ++ CL + P+ RPT
Sbjct: 223 PPKLKDKEK-WSPVFHDFIKK---CLTKDPKKRPT 253
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 94.4 bits (235), Expect = 2e-21
Identities = 74/264 (28%), Positives = 116/264 (43%), Gaps = 40/264 (15%)
Query: 426 GEVVAVKKF-HSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFC--SHPRHSFLVYEC 482
GE VAVK HS E + +F EI+ L + H NIVK+ G C R L+ E
Sbjct: 33 GEQVAVKSLNHS---GEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEY 89
Query: 483 LERGSLAEIL----SNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNV 538
L GSL + L + + + + + Y+ +HRD++++N+
Sbjct: 90 LPSGSLRDYLQRHRDQINLKRLLLFSSQ------ICKGMDYLGSQ---RYIHRDLAARNI 140
Query: 539 LLSSEYEARVSDFGIAKFLKPGSSNWT-----EFAGTFGYVAPELAYTMKVTEKCDVYSF 593
L+ SE ++SDFG+AK L + E F Y APE T K + DV+SF
Sbjct: 141 LVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESP-IFWY-APECLRTSKFSSASDVWSF 198
Query: 594 GVLALEVI----KGKHP-RDFISLLSSSSSNMNLS-LNEILDP--RLPLPSRNIQDKLIS 645
GV E+ + P +F+ ++ + M ++ L E+L RLP P
Sbjct: 199 GVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRP-----PSCPD 253
Query: 646 -ILEVALLCLEESPESRPTMQTVC 668
+ ++ LC E P+ RP+ +
Sbjct: 254 EVYDLMKLCWEAEPQDRPSFADLI 277
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 93.7 bits (233), Expect = 4e-21
Identities = 79/274 (28%), Positives = 126/274 (45%), Gaps = 37/274 (13%)
Query: 410 IGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
+G G SV + + +P+G V+A K H + ++ SV+++ L E++ + E R IV FYG
Sbjct: 13 LGAGNGGSVSKVKHIPTGTVMAKKVVH--IGAKSSVRKQILRELQIMHECRSPYIVSFYG 70
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM---HHDCF 525
+ + + E ++ GSL I G I + + +V L+Y+ H
Sbjct: 71 AFLNENNICMCMEFMDCGSLDRIYKKGGPIPV---EILGKIAVAVVEGLTYLYNVHR--- 124
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVT 585
I+HRDI N+L++S + ++ DFG++ L ++ F GT Y++PE K T
Sbjct: 125 --IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIAD--TFVGTSTYMSPERIQGGKYT 180
Query: 586 EKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD----------PRLPLP 635
K DV+S G+ +E+ GK P F S+ + ILD PRLP
Sbjct: 181 VKSDVWSLGISIIELALGKFPFAF----SNIDDDGQDDPMGILDLLQQIVQEPPPRLP-- 234
Query: 636 SRNIQDKLISILEVAL-LCLEESPESRPTMQTVC 668
L + CL + P RPT Q +C
Sbjct: 235 ----SSDFPEDLRDFVDACLLKDPTERPTPQQLC 264
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 92.4 bits (230), Expect = 7e-21
Identities = 66/249 (26%), Positives = 114/249 (45%), Gaps = 19/249 (7%)
Query: 424 PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECL 483
P+G+++AVK + I Q++ L E+ L + IV FYG + + E +
Sbjct: 24 PTGKIMAVKTIRLEINEAI--QKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81
Query: 484 ERGSLAEILSN-DGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS 542
+ GSL +IL G I E + + +V L+Y+H I+HRD+ N+L++S
Sbjct: 82 DGGSLDKILKEVQGRIPER---ILGKIAVAVLKGLTYLHEKH--KIIHRDVKPSNILVNS 136
Query: 543 EYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK 602
+ ++ DFG++ L +S F GT Y+APE + K D++S G+ +E+
Sbjct: 137 RGQIKLCDFGVSGQLV--NSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELAT 194
Query: 603 GKHPRDFISLLSSSSSNMNLS-LNEILDPRLP-LPSRNIQDKLISILEVALLCLEESPES 660
G+ P + + L I++ P LPS + LCL + P
Sbjct: 195 GRFPYPP----ENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVN---LCLIKDPRE 247
Query: 661 RPTMQTVCQ 669
RP+ + + +
Sbjct: 248 RPSYKELLE 256
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 90.5 bits (225), Expect = 5e-20
Identities = 67/278 (24%), Positives = 116/278 (41%), Gaps = 35/278 (12%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG G VY+ + +GE+VA+KK SE + + L EIK L E+ H NI+K
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEG-IPKTALREIKLLKELNHPNIIKLLD 65
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH-HDCFPP 527
H +LV+E ++ L +++ + + + + + L++ H H
Sbjct: 66 VFRHKGDLYLVFEFMDT-DLYKLI--KDRQRGLPESLIKSYLYQLLQGLAFCHSHGIL-- 120
Query: 528 IVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKV-TE 586
HRD+ +N+L+++E +++DFG+A+ +T + T Y APEL K +
Sbjct: 121 --HRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYST 178
Query: 587 KCDVYSFGVLALEVIK------GKHPRDFISL---------------LSSSSSNMNLSLN 625
D++S G + E++ GK D + +S + N S
Sbjct: 179 PVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFP 238
Query: 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPT 663
+ LP N + + +L L P R T
Sbjct: 239 KKAGMPLPKLFPNASPQALDLLSQ---MLHYDPHKRIT 273
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 89.4 bits (222), Expect = 8e-20
Identities = 74/282 (26%), Positives = 123/282 (43%), Gaps = 35/282 (12%)
Query: 401 TKNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
NF E+ IG G + VY+ L G VVA+KK + + +++ L EI L ++
Sbjct: 1 LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRT-------NVIKS 512
H N++K+ +V E + G L+ + IK F R
Sbjct: 61 HPNVIKYLASFIENNELNIVLELADAGDLSRM------IKHFKKQKRLIPERTIWKYFVQ 114
Query: 513 VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFG 572
+ +AL +MH I+HRDI NV +++ ++ D G+ +F ++ GT
Sbjct: 115 LCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPY 171
Query: 573 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNL-SLNEILD-- 629
Y++PE + K D++S G L E+ + P F MNL SL + ++
Sbjct: 172 YMSPERIHENGYNFKSDIWSLGCLLYEMAALQSP--F------YGDKMNLYSLCKKIEKC 223
Query: 630 --PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
P PLP+ + ++L ++ C+ PE RP + V Q
Sbjct: 224 DYP--PLPADHYSEELRDLVSR---CINPDPEKRPDISYVLQ 260
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 89.3 bits (221), Expect = 8e-20
Identities = 76/268 (28%), Positives = 126/268 (47%), Gaps = 36/268 (13%)
Query: 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
+ +G G V+ G VAVK +S S FL E + + ++RH +V+
Sbjct: 11 IKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPES----FLEEAQIMKKLRHDKLVQL 66
Query: 467 YGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFP 526
Y S ++V E + +GSL + L DG + ++ VA ++Y+ +
Sbjct: 67 YAVVSE-EPIYIVTEYMSKGSLLDFL-KDGEGRALKLPNLVDMAAQVAAGMAYIERMNY- 123
Query: 527 PIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT---FGYVAPELAYTMK 583
+HRD+ S N+L+ +++DFG+A+ ++ + +T G + APE A +
Sbjct: 124 --IHRDLRSANILVGDGLVCKIADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYGR 179
Query: 584 VTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDP-----RLPLPSR 637
T K DV+SFG+L E++ KG+ P MN E+L+ R+P P
Sbjct: 180 FTIKSDVWSFGILLTELVTKGRVP----------YPGMN--NREVLEQVERGYRMPCP-- 225
Query: 638 NIQDKLISILEVALLCLEESPESRPTMQ 665
QD IS+ E+ L C ++ PE RPT +
Sbjct: 226 --QDCPISLHELMLQCWKKDPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 89.2 bits (221), Expect = 9e-20
Identities = 68/241 (28%), Positives = 111/241 (46%), Gaps = 26/241 (10%)
Query: 429 VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSL 488
VA+K +SE EF+ E K + ++ H +V+ YG C+ R ++V E + G L
Sbjct: 31 VAIKMIKEGSMSE----DEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCL 86
Query: 489 AEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARV 548
L G K F + K V ++Y+ F +HRD++++N L+ + +V
Sbjct: 87 LNYLREHG--KRFQPSQLLEMCKDVCEGMAYLESKQF---IHRDLAARNCLVDDQGCVKV 141
Query: 549 SDFGIAKFL---KPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GK 604
SDFG+++++ + SS ++F + PE+ K + K DV++FGVL EV GK
Sbjct: 142 SDFGLSRYVLDDEYTSSVGSKFP--VRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGK 199
Query: 605 HPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTM 664
P + +N RL P +K+ +I+ C E E RPT
Sbjct: 200 MPYERF-------NNSETVEKVSQGLRLYRPHL-ASEKVYAIMYS---CWHEKAEERPTF 248
Query: 665 Q 665
Q
Sbjct: 249 Q 249
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 89.6 bits (222), Expect = 1e-19
Identities = 56/202 (27%), Positives = 103/202 (50%), Gaps = 19/202 (9%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG G +VY ++ +G+ VA+K+ + L + + +NEI + E +H NIV +
Sbjct: 27 IGQGASGTVYTAIDVATGQEVAIKQMN---LQQQPKKELIINEILVMRENKHPNIVNYLD 83
Query: 469 FCSHPRHSFLVYECLERGSLAEILS----NDGSIKEFSWIVRTNVIKSVANALSYMHHDC 524
++V E L GSL ++++ ++G I V + AL ++H +
Sbjct: 84 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--------AAVCRECLQALEFLHSN- 134
Query: 525 FPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKV 584
++HRDI S N+LL + +++DFG + P S + GT ++APE+
Sbjct: 135 --QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY 192
Query: 585 TEKCDVYSFGVLALEVIKGKHP 606
K D++S G++A+E+++G+ P
Sbjct: 193 GPKVDIWSLGIMAIEMVEGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 88.9 bits (221), Expect = 2e-19
Identities = 75/282 (26%), Positives = 120/282 (42%), Gaps = 58/282 (20%)
Query: 425 SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLE 484
+GE+VA+KKF E V++ L E+K L ++RH NIV +LV+E +E
Sbjct: 25 TGEIVAIKKFKESEDDED-VKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVE 83
Query: 485 RGSLAEILSNDG-----SIKEFSWIVRTNVIKSVANALSYMH-HDCFPPIVHRDISSKNV 538
R L + ++ G +++ + W + A++Y H H+ I+HRDI +N+
Sbjct: 84 RTLLELLEASPGGLPPDAVRSYIW--------QLLQAIAYCHSHN----IIHRDIKPENI 131
Query: 539 LLSSEYEARVSDFGIAKFLK-PGSSNWTEFAGTFGYVAPEL-----AYTMKVTEKCDVYS 592
L+S ++ DFG A+ L+ +S T++ T Y APEL Y V DV++
Sbjct: 132 LVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPV----DVWA 187
Query: 593 FGVLALEVIK---------------------GKHPRDFISLLSSSSSNMNLSLNEILDPR 631
G + E++ G P L SS+ ++ E P
Sbjct: 188 IGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQP- 246
Query: 632 LPLPSRNIQDKLISILEVALL--CLEESPESRPTMQTVCQLL 671
L R +S + L CL P+ R T +LL
Sbjct: 247 ESLERR--YPGKVSSPALDFLKACLRMDPKERLTCD---ELL 283
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 88.5 bits (220), Expect = 2e-19
Identities = 73/294 (24%), Positives = 124/294 (42%), Gaps = 57/294 (19%)
Query: 404 FDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN 462
F+ + IG G VY+ +G++VA+K + E ++ E N ++ + H N
Sbjct: 8 FELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEE-YNILRKYSN--HPN 64
Query: 463 IVKFYGFCSHPRHS------FLVYECLERGSLAE----ILSNDGSIKEFSWIVRTNVIKS 512
I FYG +LV E GS+ + + +KE WI +++
Sbjct: 65 IATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKE-EWI--AYILRE 121
Query: 513 VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFG 572
L+Y+H + ++HRDI +N+LL+ E ++ DFG++ L F GT
Sbjct: 122 TLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPY 178
Query: 573 YVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGK------HP-RDFISLLSSSSSNM 620
++APE+ + + + DV+S G+ A+E+ GK HP R + +
Sbjct: 179 WMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPP--- 235
Query: 621 NLSLNEILDPRLPLP---SRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
P L P S+ D + CL ++ E RP M+ +LL
Sbjct: 236 ---------PTLKSPENWSKKFNDFISE-------CLIKNYEQRPFME---ELL 270
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 88.3 bits (219), Expect = 2e-19
Identities = 68/261 (26%), Positives = 124/261 (47%), Gaps = 25/261 (9%)
Query: 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGF 469
+G G V+ G + VAVK + ++FL E + + ++RH +++ Y
Sbjct: 14 LGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDP----KDFLAEAQIMKKLRHPKLIQLYAV 69
Query: 470 CSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIV 529
C+ ++V E ++ GSL E L + ++ VA+ ++Y+ + +
Sbjct: 70 CTLEEPIYIVTELMKYGSLLEYLQGGAG-RALKLPQLIDMAAQVASGMAYLEAQNY---I 125
Query: 530 HRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAG-TFGYVAPELAYTMKVTEKC 588
HRD++++NVL+ +V+DFG+A+ +K E A + APE A + + K
Sbjct: 126 HRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKS 185
Query: 589 DVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP--RLPLPSRNIQDKLIS 645
DV+SFG+L E++ G+ P ++ N + + +D R+P P +L
Sbjct: 186 DVWSFGILLTEIVTYGRMPYPGMT---------NAEVLQQVDQGYRMPCPP-GCPKELYD 235
Query: 646 ILEVALLCLEESPESRPTMQT 666
I+ L C +E P+ RPT +T
Sbjct: 236 IM---LDCWKEDPDDRPTFET 253
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 88.2 bits (219), Expect = 3e-19
Identities = 74/277 (26%), Positives = 121/277 (43%), Gaps = 53/277 (19%)
Query: 408 QCIGIGGQASVYRGE-LPSGE----VVAVKKFHSLLLSEISVQ--REFLNEIKALTEIRH 460
+ +G G +VY+G +P GE VA+K +L E S + +E L+E + + H
Sbjct: 13 KVLGSGAFGTVYKGVWIPEGEKVKIPVAIK----VLREETSPKANKEILDEAYVMASVDH 68
Query: 461 RNIVKFYGFCSHPRHSFLVYECLERGSLAEILSND----GSIKEFSWIVRTNVIKSVANA 516
++V+ G C + L+ + + G L + + N GS +W V+ +A
Sbjct: 69 PHVVRLLGICLSSQVQ-LITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQ------IAKG 121
Query: 517 LSY--MHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT--FG 572
+SY +VHRD++++NVL+ + +++DFG+AK L + G
Sbjct: 122 MSYLEEKR-----LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIK 176
Query: 573 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILD-- 629
++A E T K DV+S+GV E++ G P + + EI D
Sbjct: 177 WMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYE------------GIPAVEIPDLL 224
Query: 630 ---PRLPLPSRNIQDKLISILEVALLCLEESPESRPT 663
RLP P I I + V + C ESRPT
Sbjct: 225 EKGERLPQPP--ICT--IDVYMVLVKCWMIDAESRPT 257
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 87.7 bits (218), Expect = 3e-19
Identities = 69/275 (25%), Positives = 125/275 (45%), Gaps = 32/275 (11%)
Query: 409 CIGIGGQASVYR-GELPSGEVVAVKKFHSLLLSEISVQREFL-NEIKALTEIRHRNIVKF 466
IG G +V + G+++ K+ ++E +++ L +E+ L E++H NIV++
Sbjct: 7 TIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTE--KEKQQLVSEVNILRELKHPNIVRY 64
Query: 467 YGFCSHPRHS--FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVAN---ALSYMH 521
Y + ++V E E G LA+++ KE +I + + + AL H
Sbjct: 65 YDRIIDRSNQTLYIVMEYCEGGDLAQLIQK--CKKERKYIEEEFIWRILTQLLLALYECH 122
Query: 522 H--DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELA 579
+ D ++HRD+ N+ L + ++ DFG+AK L SS + GT Y++PE
Sbjct: 123 NRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQL 182
Query: 580 YTMKVTEKCDVYSFGVLALEVIKGKHP---RDFISLLSSSSSNMNLSLNEILDPRL-PLP 635
M EK D++S G L E+ P R+ + L S +I + + +P
Sbjct: 183 NHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLAS-----------KIKEGKFRRIP 231
Query: 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670
R +L +++ L P+ RP+ + + QL
Sbjct: 232 YR-YSSELNEVIK---SMLNVDPDKRPSTEELLQL 262
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 87.3 bits (217), Expect = 4e-19
Identities = 74/277 (26%), Positives = 127/277 (45%), Gaps = 37/277 (13%)
Query: 404 FDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN 462
FD + +G G SVY+ +G+VVA+K + E +Q E + EI L +
Sbjct: 5 FDILEKLGEGSYGSVYKAIHKETGQVVAIKV----VPVEEDLQ-EIIKEISILKQCDSPY 59
Query: 463 IVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSI---KEFSWIVRTNVIKSVANALSY 519
IVK+YG ++V E GS+++I+ +E + I+ L Y
Sbjct: 60 IVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAIL-----YQTLKGLEY 114
Query: 520 MHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELA 579
+H +HRDI + N+LL+ E +A+++DFG++ L + GT ++APE+
Sbjct: 115 LH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVI 171
Query: 580 YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639
+ K D++S G+ A+E+ +GK P S+++ + P P P+ +
Sbjct: 172 QEIGYNNKADIWSLGITAIEMAEGKPPY----------SDIHPMRAIFMIPNKPPPTLSD 221
Query: 640 QDK----LISILEVALLCLEESPESRPTMQTVCQLLC 672
+K ++ CL + PE RP+ QLL
Sbjct: 222 PEKWSPEFNDFVK---KCLVKDPEERPSAI---QLLQ 252
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 87.0 bits (216), Expect = 5e-19
Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 41/259 (15%)
Query: 418 VYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477
+ G VAVK +L +S + FL E + + ++RH +V+ Y CS +
Sbjct: 26 TWNGTTK----VAVK---TLKPGTMSPE-AFLQEAQIMKKLRHDKLVQLYAVCSEEEPIY 77
Query: 478 LVYECLERGSLAEILSND-GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSK 536
+V E + +GSL + L + G +V ++ +A ++Y+ + +HRD++++
Sbjct: 78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLV--DMAAQIAEGMAYLESRNY---IHRDLAAR 132
Query: 537 NVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT---FGYVAPELAYTMKVTEKCDVYSF 593
N+L+ +++DFG+A+ ++ +T G + APE A + T K DV+SF
Sbjct: 133 NILVGENLVCKIADFGLARLIE--DDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSF 190
Query: 594 GVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDP-----RLPLPSRNIQDKLISIL 647
G+L E++ G+ P M E+L+ R+P P N ++L ++
Sbjct: 191 GILLTEIVTYGRVP----------YPGMTNR--EVLEQVERGYRMPRPP-NCPEELYDLM 237
Query: 648 EVALLCLEESPESRPTMQT 666
L C ++ PE RPT +
Sbjct: 238 ---LQCWDKDPEERPTFEY 253
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 86.4 bits (214), Expect = 7e-19
Identities = 74/279 (26%), Positives = 118/279 (42%), Gaps = 49/279 (17%)
Query: 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGF 469
IG G VY+G L VAVK S L ++ +R+FL E + L + H NIVK G
Sbjct: 3 IGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDL--KRKFLQEAEILKQYDHPNIVKLIGV 60
Query: 470 CSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSV--ANALSYMHHDCFP 526
C + ++V E + GSL L + V+ + S+ A + Y+
Sbjct: 61 CVQKQPIYIVMELVPGGSLLTFLRKKKNRLT-----VKKLLQMSLDAAAGMEYLESKN-- 113
Query: 527 PIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG----SS-------NWTEFAGTFGYVA 575
+HRD++++N L+ ++SDFG+++ + G S WT A
Sbjct: 114 -CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWT---------A 163
Query: 576 PELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-NLSLNEILDP--RL 632
PE + T + DV+S+G+L E SL + M N E ++ R+
Sbjct: 164 PEALNYGRYTSESDVWSYGILLWET---------FSLGDTPYPGMSNQQTRERIESGYRM 214
Query: 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
P P ++ I + L C PE+RP+ + L
Sbjct: 215 PAPQLCPEE----IYRLMLQCWAYDPENRPSFSEIYNEL 249
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 86.4 bits (214), Expect = 7e-19
Identities = 58/194 (29%), Positives = 98/194 (50%), Gaps = 17/194 (8%)
Query: 413 GGQ-ASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFC 470
GGQ VY G VAVK L + EFL E + EI+H N+V+ G C
Sbjct: 16 GGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC 71
Query: 471 SHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVH 530
+ +++ E + G+L + L +E + +V + +++A+ Y+ F +H
Sbjct: 72 TREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKKNF---IH 127
Query: 531 RDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT---FGYVAPE-LAYTMKVTE 586
RD++++N L+ + +V+DFG+++ + +T AG + APE LAY K +
Sbjct: 128 RDLAARNCLVGENHLVKVADFGLSRLMT--GDTYTAHAGAKFPIKWTAPESLAYN-KFSI 184
Query: 587 KCDVYSFGVLALEV 600
K DV++FGVL E+
Sbjct: 185 KSDVWAFGVLLWEI 198
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 86.2 bits (213), Expect = 7e-19
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 36/273 (13%)
Query: 410 IGIGGQASVYRGELPSGEV-VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG G V+ G L + VAVK L ++ + +FL E + L + H NIV+ G
Sbjct: 3 IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDL--KAKFLQEARILKQYSHPNIVRLIG 60
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPI 528
C+ + ++V E ++ G L +G + +++ ++++ A + Y+
Sbjct: 61 VCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQ--MVENAAAGMEYLESKH---C 115
Query: 529 VHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFG-------YVAPELAYT 581
+HRD++++N L++ + ++SDFG+++ + G +A T G + APE
Sbjct: 116 IHRDLAARNCLVTEKNVLKISDFGMSREEEDGV-----YASTGGMKQIPVKWTAPEALNY 170
Query: 582 MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-NLSLNEILDP--RLPLPSRN 638
+ + + DV+SFG+L E SL + +N+ N E ++ RLP P
Sbjct: 171 GRYSSESDVWSFGILLWEA---------FSLGAVPYANLSNQQTREAIEQGVRLPCPE-L 220
Query: 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
D + ++E C E P RP+ TV Q L
Sbjct: 221 CPDAVYRLME---RCWEYDPGQRPSFSTVHQEL 250
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 86.4 bits (215), Expect = 1e-18
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 25/207 (12%)
Query: 408 QCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
+ +G G VY+ + +GE+VA+KK L E + L EI L E++H NIVK
Sbjct: 5 EKLGEGTYGVVYKARDKKTGEIVALKKIR-LDNEEEGIPSTALREISLLKELKHPNIVKL 63
Query: 467 YGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA----NALSYMHH 522
R +LV+E + L + L + N+IKS+ L+Y H
Sbjct: 64 LDVIHTERKLYLVFEYCDM-DLKKYLDK------RPGPLSPNLIKSIMYQLLRGLAYCHS 116
Query: 523 DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL---- 578
I+HRD+ +N+L++ + +++DFG+A+ +T T Y APE+
Sbjct: 117 HR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGS 173
Query: 579 -AYTMKVTEKCDVYSFGVLALEVIKGK 604
Y+ V D++S G + E+I GK
Sbjct: 174 KHYSTAV----DIWSVGCIFAEMITGK 196
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 87.7 bits (217), Expect = 2e-18
Identities = 89/269 (33%), Positives = 131/269 (48%), Gaps = 12/269 (4%)
Query: 8 IPPSVGNFTNLKGLYLYSNSLSGSV-PGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
P S + L L +S + + P + L+ L L +L NL L
Sbjct: 37 FPDSNLESVAVNRLALNLSSNTLLLLPSSLSRLLSLDLLSPSGISSLD-GSENLLNLLPL 95
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGK-CQQLGTLNFSMNNIT 125
+ L N L NISE+ + NLT LD+ +NN +I G L L+ S N I
Sbjct: 96 PSLDLNLNRLRSNISELLEL-TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE 153
Query: 126 GSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSE 185
S+P + L L LD S N + ++P L NL +LN L L+GNK+S +LP + LS
Sbjct: 154 -SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSA 210
Query: 186 LEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLG 245
LE LDLS N + + +L NL + L LSNN+ ++ P + L L LDLS+N +
Sbjct: 211 LEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKL-EDLPESIGNLSNLETLDLSNNQI- 267
Query: 246 GEIPPQICNLESLEKLNVSHNNLSGLIPS 274
+ +L +L +L++S N+LS +P
Sbjct: 268 -SSISSLGSLTNLRELDLSGNSLSNALPL 295
|
Length = 394 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 85.5 bits (211), Expect = 2e-18
Identities = 70/257 (27%), Positives = 119/257 (46%), Gaps = 21/257 (8%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG G V++G + + +VVA+K L +E ++ + EI L++ + K+YG
Sbjct: 12 IGKGSFGEVFKGIDNRTQQVVAIKII-DLEEAEDEIE-DIQQEITVLSQCDSPYVTKYYG 69
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPI 528
+++ E L GS ++L G EF ++K + L Y+H +
Sbjct: 70 SYLKGTKLWIIMEYLGGGSALDLL-RAGPFDEFQI---ATMLKEILKGLDYLHSE---KK 122
Query: 529 VHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKC 588
+HRDI + NVLLS + + +++DFG+A L F GT ++APE+ K
Sbjct: 123 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKA 182
Query: 589 DVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILE 648
D++S G+ A+E+ KG+ P +S+M+ L P+ P+ + E
Sbjct: 183 DIWSLGITAIELAKGEPP----------NSDMHPMRVLFLIPKNNPPTL-TGEFSKPFKE 231
Query: 649 VALLCLEESPESRPTMQ 665
CL + P RPT +
Sbjct: 232 FIDACLNKDPSFRPTAK 248
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 85.2 bits (211), Expect = 3e-18
Identities = 76/260 (29%), Positives = 114/260 (43%), Gaps = 40/260 (15%)
Query: 425 SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHSFLVYEC 482
+GEVVAVKK L S R+F EI+ L ++H NIVK+ G C R+ LV E
Sbjct: 32 TGEVVAVKK---LQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEY 88
Query: 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS 542
L GSL + L + ++ + + Y+ + VHRD++++N+L+ S
Sbjct: 89 LPYGSLRDYLQKHRERLDHRKLLLYA--SQICKGMEYLGSKRY---VHRDLATRNILVES 143
Query: 543 EYEARVSDFGIAKFL----------KPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYS 592
E ++ DFG+ K L +PG S F Y APE K + DV+S
Sbjct: 144 ENRVKIGDFGLTKVLPQDKEYYKVREPGESP------IFWY-APESLTESKFSVASDVWS 196
Query: 593 FGVLALEVI----KGKHP-RDFISLLSSSSSNMNLS--LNEILDP--RLPLPSRNIQDKL 643
FGV+ E+ K P +F+ ++ + + L E+L RLP P
Sbjct: 197 FGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAP----PGCP 252
Query: 644 ISILEVALLCLEESPESRPT 663
I + C P RP+
Sbjct: 253 AEIYAIMKECWNNDPSQRPS 272
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 83.9 bits (207), Expect = 5e-18
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 44/269 (16%)
Query: 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGF 469
+G G V+ G VA+K +S FL E + + ++RH +V+ Y
Sbjct: 14 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVMKKLRHEKLVQLYAV 69
Query: 470 CSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVR----TNVIKSVANALSYMHHDCF 525
S ++V E + +GSL + L E +R ++ +A+ ++Y+ +
Sbjct: 70 VSE-EPIYIVTEYMSKGSLLDFLKG-----EMGKYLRLPQLVDMAAQIASGMAYVERMNY 123
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT---FGYVAPELAYTM 582
VHRD+ + N+L+ +V+DFG+A+ ++ + +T G + APE A
Sbjct: 124 ---VHRDLRAANILVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYG 178
Query: 583 KVTEKCDVYSFGVLALEV-IKGKHPRDFISLLSSSSSNMNLSLNEILDP-----RLPLPS 636
+ T K DV+SFG+L E+ KG+ P + E+LD R+P P
Sbjct: 179 RFTIKSDVWSFGILLTELTTKGRVPYP------------GMVNREVLDQVERGYRMPCPP 226
Query: 637 RNIQDKLISILEVALLCLEESPESRPTMQ 665
+ S+ ++ C + PE RPT +
Sbjct: 227 ECPE----SLHDLMCQCWRKEPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 84.4 bits (209), Expect = 6e-18
Identities = 74/271 (27%), Positives = 118/271 (43%), Gaps = 37/271 (13%)
Query: 411 GIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFC 470
G GG SV + L + ++ K +Q++ L E++ + IVK+YG
Sbjct: 12 GAGG--SVTKCRLKNTGMIFALKT-ITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAF 68
Query: 471 SHPRHSFL--VYECLERGSL----AEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDC 524
S + E E GSL ++ G I E V + +SV LSY+H
Sbjct: 69 LDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEK---VLGKIAESVLKGLSYLHSR- 124
Query: 525 FPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE----LAY 580
I+HRDI N+LL+ + + ++ DFG++ L +S F GT Y+APE Y
Sbjct: 125 --KIIHRDIKPSNILLTRKGQVKLCDFGVSGEL--VNSLAGTFTGTSFYMAPERIQGKPY 180
Query: 581 TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL----PS 636
++ DV+S G+ LEV + + P F + L L+ I++ P P
Sbjct: 181 SI----TSDVWSLGLTLLEVAQNRFP--FPPEGEPPLGPIEL-LSYIVNMPNPELKDEPG 233
Query: 637 RNIQ--DKLISILEVALLCLEESPESRPTMQ 665
I+ ++ ++ CLE+ P RPT
Sbjct: 234 NGIKWSEEFKDFIKQ---CLEKDPTRRPTPW 261
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 83.8 bits (207), Expect = 8e-18
Identities = 73/275 (26%), Positives = 133/275 (48%), Gaps = 26/275 (9%)
Query: 407 EQCIGIG--GQASVYRGELPSGEVVAVKKFHSLLLSEISVQR-EFLNEIKALTEIRHRNI 463
E+ IG G G+ R +LP + V +L QR +FL+E + + H NI
Sbjct: 9 EKVIGAGEFGEVCSGRLKLPGKREIPVA-IKTLKAGYTEKQRRDFLSEASIMGQFDHPNI 67
Query: 464 VKFYGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSYMHH 522
+ G + + +V E +E GSL L +DG +F+ I +++ +A+ + Y+
Sbjct: 68 IHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDG---QFTVIQLVGMLRGIASGMKYLSD 124
Query: 523 DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG-SSNWTEFAGTFG--YVAPELA 579
+ VHRD++++N+L++S +VSDFG+++ L+ + +T G + APE
Sbjct: 125 MGY---VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAI 181
Query: 580 YTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638
K T DV+S+G++ EV+ G+ P S+ ++ ++ E RLP P
Sbjct: 182 AYRKFTSASDVWSYGIVMWEVMSYGERP-----YWEMSNQDVIKAIEE--GYRLPAP--- 231
Query: 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673
D ++ ++ L C ++ RP + + +L K
Sbjct: 232 -MDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK 265
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 84.4 bits (208), Expect = 8e-18
Identities = 56/210 (26%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
K + + IG G +VY ++ +G+ VA+++ + L + + +NEI + E ++
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKN 76
Query: 461 RNIVKFYGFCSHPRHSFLVYECLERGSLAEILS----NDGSIKEFSWIVRTNVIKSVANA 516
NIV + ++V E L GSL ++++ ++G I V + A
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--------AAVCRECLQA 128
Query: 517 LSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAP 576
L ++H + ++HRDI S N+LL + +++DFG + P S + GT ++AP
Sbjct: 129 LEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 185
Query: 577 ELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
E+ K D++S G++A+E+I+G+ P
Sbjct: 186 EVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 84.5 bits (209), Expect = 8e-18
Identities = 74/263 (28%), Positives = 125/263 (47%), Gaps = 34/263 (12%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG G +VY ++ + EVVA+KK ++ + E++ L ++RH N +++ G
Sbjct: 23 IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKG 82
Query: 469 FCSHPRHS-FLVYE-CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFP 526
C H+ +LV E CL GS ++IL + K + + L+Y+H
Sbjct: 83 -CYLREHTAWLVMEYCL--GSASDIL--EVHKKPLQEVEIAAICHGALQGLAYLHSHE-- 135
Query: 527 PIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTM---K 583
+HRDI + N+LL+ +++DFG A + P +S F GT ++APE+ M +
Sbjct: 136 -RIHRDIKAGNILLTEPGTVKLADFGSASLVSPANS----FVGTPYWMAPEVILAMDEGQ 190
Query: 584 VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNL--SLNEILDPRLP-LPSRNIQ 640
K DV+S G+ +E+ + K P NMN +L I P L S +
Sbjct: 191 YDGKVDVWSLGITCIELAERKPPL----------FNMNAMSALYHIAQNDSPTLSSNDWS 240
Query: 641 DKLISILEVALLCLEESPESRPT 663
D + ++ CL++ P+ RP+
Sbjct: 241 DYFRNFVD---SCLQKIPQDRPS 260
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 84.0 bits (207), Expect = 1e-17
Identities = 57/206 (27%), Positives = 107/206 (51%), Gaps = 11/206 (5%)
Query: 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
K + + IG G +V+ ++ +G+ VA+K+ + L + + +NEI + E+++
Sbjct: 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQIN---LQKQPKKELIINEILVMKELKN 75
Query: 461 RNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM 520
NIV F F+V E L GSL ++++ + + + I V + AL ++
Sbjct: 76 PNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTE--TCMDEAQI--AAVCRECLQALEFL 131
Query: 521 HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAY 580
H + ++HRDI S NVLL + +++DFG + P S + GT ++APE+
Sbjct: 132 HAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT 188
Query: 581 TMKVTEKCDVYSFGVLALEVIKGKHP 606
K D++S G++A+E+++G+ P
Sbjct: 189 RKAYGPKVDIWSLGIMAIEMVEGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 83.1 bits (205), Expect = 1e-17
Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 23/272 (8%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
NF E+ IG G + VYR L G VA+KK L + + + + EI L ++ H
Sbjct: 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 62
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIK---SVANALS 518
N++K+Y +V E + G L+ ++ + K+ I V K + +AL
Sbjct: 63 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFK--KQKRLIPEKTVWKYFVQLCSALE 120
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL 578
+MH ++HRDI NV +++ ++ D G+ +F ++ GT Y++PE
Sbjct: 121 HMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER 177
Query: 579 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNL-SLNEILDP--RLPLP 635
+ K D++S G L E+ + P MNL SL + ++ PLP
Sbjct: 178 IHENGYNFKSDIWSLGCLLYEMAALQSP--------FYGDKMNLYSLCKKIEQCDYPPLP 229
Query: 636 SRNIQDKLISILEVALLCLEESPESRPTMQTV 667
S + ++L ++ +C+ PE RP + V
Sbjct: 230 SDHYSEELRQLVN---MCINPDPEKRPDITYV 258
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 82.9 bits (205), Expect = 1e-17
Identities = 72/266 (27%), Positives = 116/266 (43%), Gaps = 33/266 (12%)
Query: 408 QCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLN----EIKALTEIRHRN 462
+ +G G SVY G L G+ AVK+ L + +E + EI L++++H N
Sbjct: 6 ELLGSGSFGSVYEGLNLDDGDFFAVKE--VSLADDGQTGQEAVKQLEQEIALLSKLQHPN 63
Query: 463 IVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH 522
IV++ G + ++ E + GSLA++L GS E V + + L Y+H
Sbjct: 64 IVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPE---PVIRLYTRQILLGLEYLHD 120
Query: 523 DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL---- 578
VHRDI N+L+ + +++DFG+AK + S F G+ ++APE+
Sbjct: 121 R---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVE-FSFAKSFKGSPYWMAPEVIAQQ 176
Query: 579 -AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637
Y + D++S G LE+ GK P S + LP
Sbjct: 177 GGYGLAA----DIWSLGCTVLEMATGKPP-------WSQLEGVAAVFKIGRSKELPPIPD 225
Query: 638 NIQDKLISILEVALLCLEESPESRPT 663
++ D+ + L CL+ P RPT
Sbjct: 226 HLSDEAKDFI---LKCLQRDPSLRPT 248
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 83.0 bits (206), Expect = 1e-17
Identities = 70/297 (23%), Positives = 112/297 (37%), Gaps = 54/297 (18%)
Query: 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQRE-----FLNEIKAL 455
+F + IG G ++V E + + A+K +L + + +E E + L
Sbjct: 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIK-----ILDKRQLIKEKKVKYVKIEKEVL 55
Query: 456 TEI-RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA 514
T + H I+K Y + + V E G L + + GS +
Sbjct: 56 TRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGS---LDEKCTRFYAAEIL 112
Query: 515 NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE-------- 566
AL Y+H I+HRD+ +N+LL + +++DFG AK L P SS +
Sbjct: 113 LALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNID 169
Query: 567 ------------FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLS 614
F GT YV+PEL + D+++ G + +++ GK P F
Sbjct: 170 SQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPP--F----- 222
Query: 615 SSSSNMNLSLNEILDPRLPLPSRNIQD--KLISILEVALLCLEESPESRPTMQTVCQ 669
SN L+ +IL P D LI L L P+ R +
Sbjct: 223 -RGSNEYLTFQKILKLEYSFPPNFPPDAKDLIEKL------LVLDPQDRLGVNEGYD 272
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 82.4 bits (204), Expect = 2e-17
Identities = 55/175 (31%), Positives = 77/175 (44%), Gaps = 15/175 (8%)
Query: 446 REFLNEIKALTEIRHRNIVKF-YGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFS-- 502
R LNE + L E+ H +V Y F + +LV + L G L LS E
Sbjct: 45 RNVLNERRILQELNHPFLVNLWYSFQDE-ENMYLVVDLLLGGDLRYHLSQKVKFSEEQVK 103
Query: 503 -WIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561
WI + AL Y+H I+HRDI N+LL + ++DF IA + P +
Sbjct: 104 FWIC------EIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154
Query: 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS 616
T +GT GY+APE+ + D +S GV A E ++GK P S
Sbjct: 155 LT-TSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRD 208
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 81.9 bits (202), Expect = 3e-17
Identities = 65/211 (30%), Positives = 109/211 (51%), Gaps = 29/211 (13%)
Query: 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGF 469
IG G +V +GE +G+ VAVK + +++ Q FL E +T++ H+N+V+ G
Sbjct: 14 IGEGEFGAVLQGEY-TGQKVAVK----NIKCDVTAQ-AFLEETAVMTKLHHKNLVRLLGV 67
Query: 470 CSHPRHSFLVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPI 528
H ++V E + +G+L L G ++ +++ ++ VA + Y+ +
Sbjct: 68 ILH-NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSL--DVAEGMEYLESK---KL 121
Query: 529 VHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN------WTEFAGTFGYVAPELAYTM 582
VHRD++++N+L+S + A+VSDFG+A+ G N WT APE
Sbjct: 122 VHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKWT---------APEALKHK 172
Query: 583 KVTEKCDVYSFGVLALEVIK-GKHPRDFISL 612
K + K DV+S+GVL EV G+ P +SL
Sbjct: 173 KFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL 203
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 82.5 bits (203), Expect = 3e-17
Identities = 56/210 (26%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
K + + IG G +VY ++ +G+ VA+K+ + L + + +NEI + E ++
Sbjct: 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMN---LQQQPKKELIINEILVMRENKN 75
Query: 461 RNIVKFYGFCSHPRHSFLVYECLERGSLAEILS----NDGSIKEFSWIVRTNVIKSVANA 516
NIV + ++V E L GSL ++++ ++G I V + A
Sbjct: 76 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQI--------AAVCRECLQA 127
Query: 517 LSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAP 576
L ++H + ++HRDI S N+LL + +++DFG + P S + GT ++AP
Sbjct: 128 LDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAP 184
Query: 577 ELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
E+ K D++S G++A+E+++G+ P
Sbjct: 185 EVVTRKAYGPKVDIWSLGIMAIEMVEGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 3e-17
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 39/224 (17%)
Query: 410 IGIGGQASVYRGELPSG------EVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNI 463
+G G V+ GE E+VAVK + +++F E + LT +H NI
Sbjct: 13 LGEGAFGKVFLGECYHLEPENDKELVAVKTLKET--ASNDARKDFEREAELLTNFQHENI 70
Query: 464 VKFYGFCSHPRHSFLVYECLERGSLAEILSNDG----------------SIKEFSWIVRT 507
VKFYG C+ +V+E +E G L + L + G ++ + I
Sbjct: 71 VKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIA-- 128
Query: 508 NVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEF 567
+A+ + Y+ F VHRD++++N L+ + ++ DFG+++ + ++++
Sbjct: 129 ---VQIASGMVYLASQHF---VHRDLATRNCLVGYDLVVKIGDFGMSRDVY--TTDYYRV 180
Query: 568 AGT----FGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 606
G ++ PE K T + DV+SFGV+ E+ GK P
Sbjct: 181 GGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQP 224
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 81.0 bits (201), Expect = 4e-17
Identities = 69/227 (30%), Positives = 98/227 (43%), Gaps = 46/227 (20%)
Query: 449 LNEIKALTEIRHRNIVK-FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRT 507
L E L+ I H IVK Y F + +LV E G L LS +G E
Sbjct: 41 LTERNILSRINHPFIVKLHYAFQT-EEKLYLVLEYAPGGELFSHLSKEGRFSE------- 92
Query: 508 NVIK----SVANALSYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGS 561
+ + AL Y+H I++RD+ +N+LL ++ +++DFG+AK GS
Sbjct: 93 ERARFYAAEIVLALEYLHSLG----IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS 148
Query: 562 SNWTEFAGTFGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS 617
T F GT Y+APE+ Y V D +S GVL E++ GK P F +
Sbjct: 149 RTNT-FCGTPEYLAPEVLLGKGYGKAV----DWWSLGVLLYEMLTGKPP--F------YA 195
Query: 618 SNMNLSLNEILDPRLPLP---SRNIQDKLISILEVALLCLEESPESR 661
+ +IL L P S +D LIS L L++ P R
Sbjct: 196 EDRKEIYEKILKDPLRFPEFLSPEARD-LISGL------LQKDPTKR 235
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 81.1 bits (200), Expect = 6e-17
Identities = 57/206 (27%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLN---EIKALTEIRHRNIVKF 466
+G G +VY G G+++AVK+ + ++ ++E+ E+ L ++H NIV++
Sbjct: 8 LGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQY 67
Query: 467 YGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFP 526
G C + E + GS++ IL+ G + E V K + + ++Y+H++C
Sbjct: 68 LGTCLDDNTISIFMEFVPGGSISSILNRFGPLPE---PVFCKYTKQILDGVAYLHNNC-- 122
Query: 527 PIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE------FAGTFGYVAPELAY 580
+VHRDI NV+L ++ DFG A+ L + T GT ++APE+
Sbjct: 123 -VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVIN 181
Query: 581 TMKVTEKCDVYSFGVLALEVIKGKHP 606
K D++S G E+ GK P
Sbjct: 182 ESGYGRKSDIWSIGCTVFEMATGKPP 207
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 80.8 bits (199), Expect = 6e-17
Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 27/267 (10%)
Query: 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGF 469
+G G V+ G + VAVK +L +SVQ FL E + ++H +V+ Y
Sbjct: 14 LGAGQFGEVWMGYYNNSTKVAVK---TLKPGTMSVQ-AFLEEANLMKTLQHDKLVRLYAV 69
Query: 470 CSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIK---SVANALSYMHHDCFP 526
+ +++ E + +GSL + L +D E ++ +I +A ++Y+ +
Sbjct: 70 VTKEEPIYIITEYMAKGSLLDFLKSD----EGGKVLLPKLIDFSAQIAEGMAYIERKNY- 124
Query: 527 PIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAG-TFGYVAPELAYTMKVT 585
+HRD+ + NVL+S +++DFG+A+ ++ E A + APE T
Sbjct: 125 --IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFT 182
Query: 586 EKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLI 644
K DV+SFG+L E++ GK P S+S++ +L R+P N D+L
Sbjct: 183 IKSDVWSFGILLYEIVTYGKIPYP-----GMSNSDVMSALQR--GYRMPRM-ENCPDELY 234
Query: 645 SILEVALLCLEESPESRPTMQTVCQLL 671
I++ C +E E RPT + +L
Sbjct: 235 DIMK---TCWKEKAEERPTFDYLQSVL 258
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 80.8 bits (199), Expect = 6e-17
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 17/214 (7%)
Query: 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
K Q IG G V G+ G VAVK + + + FL E +T++RH
Sbjct: 6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVK-----CIKNDATAQAFLAEASVMTQLRHS 59
Query: 462 NIVKFYGFCSHPRHS-FLVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSY 519
N+V+ G + ++V E + +GSL + L + G S+ +++ ++ V A+ Y
Sbjct: 60 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL--DVCEAMEY 117
Query: 520 MHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELA 579
+ + F VHRD++++NVL+S + A+VSDFG+ K SS + APE
Sbjct: 118 LEANNF---VHRDLAARNVLVSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEAL 171
Query: 580 YTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISL 612
K + K DV+SFG+L E+ G+ P I L
Sbjct: 172 REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL 205
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 81.0 bits (201), Expect = 7e-17
Identities = 56/208 (26%), Positives = 104/208 (50%), Gaps = 27/208 (12%)
Query: 408 QCIGIGGQASVYRG-ELPSGEVVAVK----KFHSLLLSEISVQREFLNEIKALTEI-RHR 461
+ +G G SVY +GE+VA+K KF+S E + L E+K+L ++ H
Sbjct: 5 KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSW---EECMN---LREVKSLRKLNEHP 58
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH 521
NIVK + V+E +E G+L +++ + FS V ++I + L+++H
Sbjct: 59 NIVKLKEVFRENDELYFVFEYME-GNLYQLMKDRKGKP-FSESVIRSIIYQILQGLAHIH 116
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL--- 578
F HRD+ +N+L+S +++DFG+A+ ++ +T++ T Y APE+
Sbjct: 117 KHGF---FHRDLKPENLLVSGPEVVKIADFGLAREIRS-RPPYTDYVSTRWYRAPEILLR 172
Query: 579 --AYTMKVTEKCDVYSFGVLALEVIKGK 604
+Y+ V D+++ G + E+ +
Sbjct: 173 STSYSSPV----DIWALGCIMAELYTLR 196
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 80.5 bits (198), Expect = 8e-17
Identities = 72/283 (25%), Positives = 131/283 (46%), Gaps = 34/283 (12%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKAL 455
EI R + D + +G G V+ G VA+K + FL E + +
Sbjct: 2 EIPRESLRLDVK--LGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMP----EAFLQEAQIM 55
Query: 456 TEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSN-DGSIKEFSWIVRTNVIKSVA 514
++RH +V Y S ++V E + +GSL + L DG + +V ++ +A
Sbjct: 56 KKLRHDKLVPLYAVVSE-EPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLV--DMAAQIA 112
Query: 515 NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT---F 571
+ ++Y+ + +HRD+ + N+L+ +++DFG+A+ ++ + +T G
Sbjct: 113 DGMAYIERMNY---IHRDLRAANILVGDNLVCKIADFGLARLIE--DNEYTARQGAKFPI 167
Query: 572 GYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDP 630
+ APE A + T K DV+SFG+L E++ KG+ P +N + E ++
Sbjct: 168 KWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP---------YPGMVNREVLEQVER 218
Query: 631 --RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
R+P P Q S+ E+ LC ++ P+ RPT + + L
Sbjct: 219 GYRMPCP----QGCPESLHELMKLCWKKDPDERPTFEYIQSFL 257
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 80.7 bits (199), Expect = 1e-16
Identities = 75/279 (26%), Positives = 128/279 (45%), Gaps = 39/279 (13%)
Query: 414 GQASVYRGELP----SGEVVAVKKFHSLLLSEISVQRE--FLNEIKALTEIRHRNIVKFY 467
G+ S+Y + P +GE+VAVK L E Q + EI L + H NIVK+
Sbjct: 18 GKVSLYCYD-PANDGTGEMVAVKT----LKRECGQQNTSGWKKEINILKTLYHENIVKYK 72
Query: 468 GFCSHP--RHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSYMHHDC 524
G CS + L+ E + GSL + L + ++ + + + ++Y+H
Sbjct: 73 GCCSEQGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFA-----QQICEGMAYLHSQH 127
Query: 525 FPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW----TEFAGTFGYVAPELAY 580
+ +HRD++++NVLL ++ ++ DFG+AK + G + + F Y A E
Sbjct: 128 Y---IHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-AVECLK 183
Query: 581 TMKVTEKCDVYSFGVLALEVI-----KGKHPRDFISLLSSSSSNMN-LSLNEILD--PRL 632
K + DV+SFGV E++ K P+ F ++ M + L E+L+ RL
Sbjct: 184 ENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRL 243
Query: 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
P P Q+ + + C E + RPT +++ +L
Sbjct: 244 PCPKNCPQE----VYILMKNCWETEAKFRPTFRSLIPIL 278
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 80.4 bits (198), Expect = 1e-16
Identities = 75/281 (26%), Positives = 132/281 (46%), Gaps = 39/281 (13%)
Query: 404 FDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN 462
F+ + +G G VY+G + +G++ A+K E ++ E +N +K + HRN
Sbjct: 18 FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLE-INMLKKYSH--HRN 74
Query: 463 IVKFYGFC---SHPRHS---FLVYECLERGSLAEILSND--GSIKEFSWIVRTNVIKSVA 514
I +YG S P H +LV E GS+ +++ N ++KE WI + + +
Sbjct: 75 IATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKE-DWIAY--ICREIL 131
Query: 515 NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYV 574
L+++H ++HRDI +NVLL+ E ++ DFG++ L F GT ++
Sbjct: 132 RGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWM 188
Query: 575 APELAYTMKVTE-----KCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD 629
APE+ + + + D++S G+ A+E+ +G P +M+ L
Sbjct: 189 APEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPL----------CDMHPMRALFLI 238
Query: 630 PRLPLP---SRNIQDKLISILEVALLCLEESPESRPTMQTV 667
PR P P S+ K I +E CL ++ SRP+ + +
Sbjct: 239 PRNPPPKLKSKKWSKKFIDFIEG---CLVKNYLSRPSTEQL 276
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 79.6 bits (197), Expect = 1e-16
Identities = 63/202 (31%), Positives = 93/202 (46%), Gaps = 16/202 (7%)
Query: 410 IGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
+G+GG V ++ A+K + E Q +E + L E H IVK Y
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYR 60
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPI 528
++ +++ E G L IL + G E + R I V A Y+H+ I
Sbjct: 61 TFKDKKYIYMLMEYCLGGELWTILRDRGLFDE--YTARF-YIACVVLAFEYLHNR---GI 114
Query: 529 VHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL----AYTMKV 584
++RD+ +N+LL S ++ DFG AK LK G WT F GT YVAPE+ Y V
Sbjct: 115 IYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWT-FCGTPEYVAPEIILNKGYDFSV 173
Query: 585 TEKCDVYSFGVLALEVIKGKHP 606
D +S G+L E++ G+ P
Sbjct: 174 ----DYWSLGILLYELLTGRPP 191
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 79.1 bits (195), Expect = 2e-16
Identities = 64/276 (23%), Positives = 113/276 (40%), Gaps = 31/276 (11%)
Query: 403 NFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN 462
+F+ IG G V++ + + V K L + E ++E + L ++
Sbjct: 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60
Query: 463 IVKFYGFCSHPRHSFLVYECLERGSLAEI--------LSNDGSIKEFSWIVRTNVIKSVA 514
I+++Y +V E E G L ++ L D + F I+
Sbjct: 61 IIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILL-------- 112
Query: 515 NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYV 574
L+++H I+HRDI S N+ L + ++ D G+AK L ++ GT Y+
Sbjct: 113 -GLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYL 168
Query: 575 APELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634
+PEL EK DV++ GV+ E GKHP D ++N + +I+ P
Sbjct: 169 SPELCEDKPYNEKSDVWALGVVLYECCTGKHPFD--------ANNQGALILKIIRGVFPP 220
Query: 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670
S+ +L +++ CL + RP + +
Sbjct: 221 VSQMYSQQLAQLID---QCLTKDYRQRPDTFQLLRN 253
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 79.7 bits (196), Expect = 2e-16
Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 21/257 (8%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG G VY+G + + EVVA+K L +E ++ + EI L++ I ++YG
Sbjct: 12 IGKGSFGEVYKGIDNRTKEVVAIKII-DLEEAEDEIE-DIQQEITVLSQCDSPYITRYYG 69
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPI 528
+++ E L GS ++L G ++E ++I +++ + L Y+H +
Sbjct: 70 SYLKGTKLWIIMEYLGGGSALDLL-KPGPLEE-TYI--ATILREILKGLDYLHSE---RK 122
Query: 529 VHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKC 588
+HRDI + NVLLS + + +++DFG+A L F GT ++APE+ K
Sbjct: 123 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKA 182
Query: 589 DVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILE 648
D++S G+ A+E+ KG+ P +S+++ L P+ P+ Q E
Sbjct: 183 DIWSLGITAIELAKGEPP----------NSDLHPMRVLFLIPKNSPPTLEGQYSK-PFKE 231
Query: 649 VALLCLEESPESRPTMQ 665
CL + P RPT +
Sbjct: 232 FVEACLNKDPRFRPTAK 248
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 79.4 bits (195), Expect = 2e-16
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 37/280 (13%)
Query: 404 FDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN 462
F+ + +G G VY+G + +G++ A+K E +++E +N +K + HRN
Sbjct: 8 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQE-INMLKKYSH--HRN 64
Query: 463 IVKFYG--FCSHP----RHSFLVYECLERGSLAEILSN-DGSIKEFSWIVRTNVIKSVAN 515
I +YG +P +LV E GS+ +++ N G+ + WI + + +
Sbjct: 65 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILR 122
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVA 575
LS++H ++HRDI +NVLL+ E ++ DFG++ L F GT ++A
Sbjct: 123 GLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMA 179
Query: 576 PELAYTMKVTE-----KCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP 630
PE+ + + K D++S G+ A+E+ +G P +M+ L P
Sbjct: 180 PEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL----------CDMHPMRALFLIP 229
Query: 631 RLPLP---SRNIQDKLISILEVALLCLEESPESRPTMQTV 667
R P P S+ K S +E CL ++ RPT + +
Sbjct: 230 RNPAPRLKSKKWSKKFQSFIES---CLVKNHSQRPTTEQL 266
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 79.1 bits (195), Expect = 3e-16
Identities = 72/269 (26%), Positives = 126/269 (46%), Gaps = 34/269 (12%)
Query: 410 IGIGGQASVY--RGELPSGEVVAVKK--FHSLLLSEISVQRE-----FLNEIKALTE-IR 459
+G G VY R + ++A+K+ H+ + +R+ ++E+ + E +R
Sbjct: 8 LGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLR 67
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKE----FSWIVRTNVIKSVAN 515
H NIV++Y ++V + +E L E + S+KE F+ N+ +
Sbjct: 68 HPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFN---SLKEKKQRFTEERIWNIFVQMVL 124
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVA 575
AL Y+H + IVHRD++ N++L + + ++DFG+AK +P S T GT Y
Sbjct: 125 ALRYLHKEKR--IVHRDLTPNNIMLGEDDKVTITDFGLAKQKQP-ESKLTSVVGTILYSC 181
Query: 576 PELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSL-NEILDPRL-P 633
PE+ EK DV++FG + ++ + P S+NM LSL +I++ P
Sbjct: 182 PEIVKNEPYGEKADVWAFGCILYQMCTLQPP--------FYSTNM-LSLATKIVEAVYEP 232
Query: 634 LPSRNIQDKLISILEVALLCLEESPESRP 662
LP + + ++ CL E+RP
Sbjct: 233 LPEGMYSEDVTDVITS---CLTPDAEARP 258
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 78.7 bits (195), Expect = 4e-16
Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 42/215 (19%)
Query: 410 IGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQRE-------FLNEIKALTEIRHR 461
IG G VY+ +GE+VA+KK I ++ E + EIK L ++RH
Sbjct: 7 IGEGTYGQVYKARNKKTGELVALKK--------IRMENEKEGFPITAIREIKLLQKLRHP 58
Query: 462 NIVKFYGFC-SHPRHS-FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA----N 515
NIV+ S + S ++V+E ++ L +L + +F+ + IK
Sbjct: 59 NIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEV--KFT----ESQIKCYMKQLLE 111
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL-KPGSSNWTEFAGTFGYV 574
L Y+H + I+HRDI N+L++++ +++DFG+A+ K S+++T T Y
Sbjct: 112 GLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYR 168
Query: 575 APEL-----AYTMKVTEKCDVYSFGVLALEVIKGK 604
PEL Y +V D++S G + E+ GK
Sbjct: 169 PPELLLGATRYGPEV----DMWSVGCILAELFLGK 199
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 78.9 bits (195), Expect = 5e-16
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 410 IGIGGQASVYR-GELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG G V++ + +GE VA+KK L + + L EIKAL +H +VK
Sbjct: 8 IGEGAHGIVFKAKDRETGETVALKKVALRRLEG-GIPNQALREIKALQACQHPYVVKLLD 66
Query: 469 FCSHPRHSFLVYE-CLERGSLAEILSN------DGSIKEFSWIVRTNVIKSVANALSYMH 521
H LV E L+E+L + + +K + + + ++YMH
Sbjct: 67 VFPHGSGFVLVMEYMPS--DLSEVLRDEERPLPEAQVKSYM--------RMLLKGVAYMH 116
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGTFGYVAPELAY 580
+ I+HRD+ N+L+S++ +++DFG+A+ F + ++ T Y APEL Y
Sbjct: 117 AN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLY 173
Query: 581 -TMKVTEKCDVYSFGVLALEVIKG 603
K D+++ G + E++ G
Sbjct: 174 GARKYDPGVDLWAVGCIFAELLNG 197
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 78.6 bits (193), Expect = 8e-16
Identities = 71/259 (27%), Positives = 127/259 (49%), Gaps = 26/259 (10%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG G +VY ++ + EVVA+KK ++ + E+K L I+H N +++ G
Sbjct: 33 IGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKG 92
Query: 469 FCSHPRHSFLVYE-CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPP 527
++LV E CL GS +++L + K + + L+Y+H
Sbjct: 93 CYLREHTAWLVMEYCL--GSASDLL--EVHKKPLQEVEIAAITHGALQGLAYLHSH---N 145
Query: 528 IVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTE- 586
++HRDI + N+LL+ + +++DFG A P +S F GT ++APE+ M +
Sbjct: 146 MIHRDIKAGNILLTEPGQVKLADFGSASIASPANS----FVGTPYWMAPEVILAMDEGQY 201
Query: 587 --KCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLI 644
K DV+S G+ +E+ + K P + +++ S+ +++ NE P L S D
Sbjct: 202 DGKVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQNE--SP--TLQSNEWSDYFR 254
Query: 645 SILEVALLCLEESPESRPT 663
+ ++ CL++ P+ RPT
Sbjct: 255 NFVDS---CLQKIPQDRPT 270
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 9e-16
Identities = 65/280 (23%), Positives = 117/280 (41%), Gaps = 41/280 (14%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
+F + +G G SVY+ + L + A+K+ +S+ + + +NEI+ L + H
Sbjct: 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ-KEREDAVNEIRILASVNHP 59
Query: 462 NIVKFYGFCSHPRHSFL-------VYECLERGSLAEILSNDGSIK-----EFSWIVRTNV 509
NI+ + + +FL V E G L++ +S + + W +
Sbjct: 60 NIISY-------KEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIW----RI 108
Query: 510 IKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAG 569
+ L +H I+HRD+ S N+LL + ++ D GI+K LK + T+ G
Sbjct: 109 FIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAK-TQI-G 163
Query: 570 TFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD 629
T Y+APE+ + K D++S G L E+ P + + S ++ +
Sbjct: 164 TPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFE-----ARSMQDLRYKVQRGKY 218
Query: 630 PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
P P+P QD + L+ P+ RP +
Sbjct: 219 P--PIPPIYSQD----LQNFIRSMLQVKPKLRPNCDKILA 252
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 1e-15
Identities = 70/254 (27%), Positives = 123/254 (48%), Gaps = 19/254 (7%)
Query: 411 GIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFC 470
G G+A++YR +V K+ + LSE +R+ LNEI L+ ++H NI+ +Y
Sbjct: 11 GAFGEATLYR-RTEDDSLVVWKEVNLTRLSE-KERRDALNEIVILSLLQHPNIIAYYNHF 68
Query: 471 SHPRHSFLVYECLERGSLAEILSN-DGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIV 529
+ E G+L + + G + E ++ + + +A+SY+H I+
Sbjct: 69 MDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVL--WYLFQIVSAVSYIHKA---GIL 123
Query: 530 HRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCD 589
HRDI + N+ L+ ++ DFGI+K L S GT Y++PEL +K K D
Sbjct: 124 HRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSD 183
Query: 590 VYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEV 649
+++ G + E++ K R F +++ +NL + + P+ S + LIS++
Sbjct: 184 IWALGCVLYELLTLK--RTF-----DATNPLNLVVKIVQGNYTPVVSVYSSE-LISLVHS 235
Query: 650 ALLCLEESPESRPT 663
L++ PE RPT
Sbjct: 236 ---LLQQDPEKRPT 246
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 77.8 bits (192), Expect = 1e-15
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 32/192 (16%)
Query: 425 SGEVVAVKKFHSLLLSE--ISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482
+G++VA+KKF + SE +++ L EI+ L +++H N+V R LV+E
Sbjct: 25 TGQIVAIKKF---VESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEY 81
Query: 483 LERGSLAEILSN-----DGSIKEFSWIVRTNVIKSVANALSYMH-HDCFPPIVHRDISSK 536
+ L E+ N + IK+ W A+++ H H+C +HRD+ +
Sbjct: 82 CDHTVLNELEKNPRGVPEHLIKKIIW--------QTLQAVNFCHKHNC----IHRDVKPE 129
Query: 537 NVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL-----AYTMKVTEKCDVY 591
N+L++ + + ++ DFG A+ L ++T++ T Y APEL Y V DV+
Sbjct: 130 NILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPV----DVW 185
Query: 592 SFGVLALEVIKG 603
+ G + E++ G
Sbjct: 186 AIGCVFAELLTG 197
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 78.2 bits (192), Expect = 1e-15
Identities = 70/260 (26%), Positives = 129/260 (49%), Gaps = 28/260 (10%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG G +VY ++ + EVVA+KK ++ + E++ L ++RH N +++ G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 469 FCSHPRHSFLVYE-CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH-HDCFP 526
++LV E CL GS +++L + K + V L+Y+H H+
Sbjct: 83 CYLREHTAWLVMEYCL--GSASDLL--EVHKKPLQEVEIAAVTHGALQGLAYLHSHN--- 135
Query: 527 PIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTE 586
++HRD+ + N+LLS ++ DFG A + P + F GT ++APE+ M +
Sbjct: 136 -MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX----FVGTPYWMAPEVILAMDEGQ 190
Query: 587 ---KCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKL 643
K DV+S G+ +E+ + K P + +++ S+ +++ NE P L S + +
Sbjct: 191 YDGKVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQNE--SP--ALQSGHWSEYF 243
Query: 644 ISILEVALLCLEESPESRPT 663
+ ++ CL++ P+ RPT
Sbjct: 244 RNFVDS---CLQKIPQDRPT 260
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 77.8 bits (191), Expect = 1e-15
Identities = 54/185 (29%), Positives = 93/185 (50%), Gaps = 10/185 (5%)
Query: 422 ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481
E +G+ VAVKK L + + NE+ + + H N+V Y ++V E
Sbjct: 43 EKHTGKQVAVKKMD---LRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVME 99
Query: 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS 541
LE G+L +I+++ +E V SV ALSY+H+ ++HRDI S ++LL+
Sbjct: 100 FLEGGALTDIVTHTRMNEE----QIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLT 152
Query: 542 SEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI 601
S+ ++SDFG + GT ++APE+ + + D++S G++ +E+I
Sbjct: 153 SDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMI 212
Query: 602 KGKHP 606
G+ P
Sbjct: 213 DGEPP 217
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 78.3 bits (193), Expect = 1e-15
Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 18/190 (9%)
Query: 425 SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP-----RHSFLV 479
+GE VA+KK + + +S L EIK L +RH +IV+ P + ++V
Sbjct: 24 TGEKVAIKKINDVF-EHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVV 82
Query: 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVL 539
+E +E I +ND E +++ AL Y+H + HRD+ KN+L
Sbjct: 83 FELMESDLHQVIKANDDLTPEHHQFFLYQLLR----ALKYIHT---ANVFHRDLKPKNIL 135
Query: 540 LSSEYEARVSDFGIAK--FLK-PGSSNWTEFAGTFGYVAPEL--AYTMKVTEKCDVYSFG 594
+++ + ++ DFG+A+ F P + WT++ T Y APEL ++ K T D++S G
Sbjct: 136 ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIG 195
Query: 595 VLALEVIKGK 604
+ EV+ GK
Sbjct: 196 CIFAEVLTGK 205
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 77.4 bits (191), Expect = 1e-15
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 12/182 (6%)
Query: 425 SGEVVAVKKFHSLLLSEIS--VQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482
+G++VA+KKF L SE V++ + EI+ L ++RH N+V + +LV+E
Sbjct: 25 TGQIVAIKKF---LESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEF 81
Query: 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS 542
++ L ++ + E VR + + + + H I+HRDI +N+L+S
Sbjct: 82 VDHTVLDDLEKYPNGLDES--RVR-KYLFQILRGIEFCHSH---NIIHRDIKPENILVSQ 135
Query: 543 EYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAY-TMKVTEKCDVYSFGVLALEVI 601
++ DFG A+ L +T++ T Y APEL K D+++ G L E++
Sbjct: 136 SGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEML 195
Query: 602 KG 603
G
Sbjct: 196 TG 197
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 77.8 bits (191), Expect = 2e-15
Identities = 71/260 (27%), Positives = 126/260 (48%), Gaps = 28/260 (10%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG G +VY + EVVAVKK ++ + E+K L +++H N +++ G
Sbjct: 29 IGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKG 88
Query: 469 FCSHPRHS-FLVYE-CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFP 526
C H+ +LV E CL GS +++L + K + + L+Y+H
Sbjct: 89 -CYLKEHTAWLVMEYCL--GSASDLL--EVHKKPLQEVEIAAITHGALQGLAYLHSHN-- 141
Query: 527 PIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTE 586
++HRDI + N+LL+ + +++DFG A P +S F GT ++APE+ M +
Sbjct: 142 -MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANS----FVGTPYWMAPEVILAMDEGQ 196
Query: 587 ---KCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKL 643
K DV+S G+ +E+ + K P + +++ S+ +++ N+ P L S D
Sbjct: 197 YDGKVDVWSLGITCIELAERKPP---LFNMNAMSALYHIAQND--SP--TLQSNEWTDSF 249
Query: 644 ISILEVALLCLEESPESRPT 663
++ CL++ P+ RP
Sbjct: 250 RGFVD---YCLQKIPQERPA 266
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 77.0 bits (189), Expect = 2e-15
Identities = 51/182 (28%), Positives = 92/182 (50%), Gaps = 10/182 (5%)
Query: 425 SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLE 484
SG++VAVKK L + + NE+ + + +H N+V+ Y ++V E LE
Sbjct: 44 SGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 100
Query: 485 RGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY 544
G+L +I+++ +E V +V ALS +H ++HRDI S ++LL+ +
Sbjct: 101 GGALTDIVTHTRMNEE----QIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDG 153
Query: 545 EARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 604
++SDFG + GT ++APEL + + D++S G++ +E++ G+
Sbjct: 154 RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 213
Query: 605 HP 606
P
Sbjct: 214 PP 215
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 76.7 bits (189), Expect = 2e-15
Identities = 57/201 (28%), Positives = 97/201 (48%), Gaps = 42/201 (20%)
Query: 422 ELPSGEVVAVKKFHSLLLSEISVQ--REFL-NEIKALTEIRHRNIVKFYGFCSHPRHSFL 478
+ +G VAVKK ++ Q RE L NE+ + + +H NIV+ Y S+L
Sbjct: 40 DKSTGRQVAVKKM------DLRKQQRRELLFNEVVIMRDYQHPNIVEMYS-------SYL 86
Query: 479 V-------YECLERGSLAEILSNDGSIKEFSWIVRTN------VIKSVANALSYMHHDCF 525
V E LE G+L +I+++ R N V +V ALS++H
Sbjct: 87 VGDELWVVMEFLEGGALTDIVTH----------TRMNEEQIATVCLAVLKALSFLHAQ-- 134
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVT 585
++HRDI S ++LL+S+ ++SDFG + GT ++APE+ +
Sbjct: 135 -GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYG 193
Query: 586 EKCDVYSFGVLALEVIKGKHP 606
+ D++S G++ +E++ G+ P
Sbjct: 194 TEVDIWSLGIMVIEMVDGEPP 214
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 76.4 bits (188), Expect = 2e-15
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 32/218 (14%)
Query: 408 QCIGIGGQASVYRG-ELPSGEVVAVKKFH----------SLLLSEISVQREFLNEIKALT 456
+ IG G VY + +GE++AVK+ S + R EI+ L
Sbjct: 7 ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRS---EIETLK 63
Query: 457 EIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVAN- 515
++ H NIV++ GF + + + E + GS+ L G +E +++
Sbjct: 64 DLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEE-------QLVRFFTEQ 116
Query: 516 ---ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP--GSSNWTEFAGT 570
L+Y+H I+HRD+ + N+L+ ++ ++SDFGI+K + G+
Sbjct: 117 VLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGS 173
Query: 571 FGYVAPEL--AYTMKVTEKCDVYSFGVLALEVIKGKHP 606
++APE+ +Y+ + K D++S G + LE+ G+ P
Sbjct: 174 VFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRP 211
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 76.2 bits (187), Expect = 3e-15
Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 17/272 (6%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
NF E+ IG G + VYR L + VA+KK + + +++ + EI L ++ H
Sbjct: 3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHP 62
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH 521
N++K+ +V E + G L++++ K I V K S +
Sbjct: 63 NVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRL--IPERTVWKYFVQLCSAVE 120
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT 581
H ++HRDI NV +++ ++ D G+ +F ++ GT Y++PE +
Sbjct: 121 HMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHE 180
Query: 582 MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNL-SLNEILDP--RLPLPSRN 638
K D++S G L E+ + P MNL SL + ++ PLP+ +
Sbjct: 181 NGYNFKSDIWSLGCLLYEMAALQSP--------FYGDKMNLFSLCQKIEQCDYPPLPTEH 232
Query: 639 IQDKLISILEVALLCLEESPESRPTMQTVCQL 670
+KL E+ +C+ P+ RP + V Q+
Sbjct: 233 YSEKL---RELVSMCIYPDPDQRPDIGYVHQI 261
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 76.6 bits (189), Expect = 3e-15
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 399 RATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQRE-------FLN 450
R+ F+ IG G VYR + SGE+VA+KK + + E L
Sbjct: 4 RSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKK--------VRMDNERDGIPISSLR 55
Query: 451 EIKALTEIRHRNIVKFYGFC--SHPRHSFLVYECLER--GSLAEILSNDGSIKEFSWIVR 506
EI L +RH NIV+ H FLV E E+ SL + + S + ++
Sbjct: 56 EITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLML 115
Query: 507 TNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE 566
+ L Y+H + I+HRD+ N+LL+ + +++DFG+A+ + T
Sbjct: 116 -----QLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTP 167
Query: 567 FAGTFGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGK 604
T Y APEL T D+++ G + E++ K
Sbjct: 168 KVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHK 206
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 75.8 bits (186), Expect = 3e-15
Identities = 68/241 (28%), Positives = 114/241 (47%), Gaps = 35/241 (14%)
Query: 396 EIIRATKNFDAE--QCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEI 452
+I+R D E Q +G G VY+ L +GE+ AVK + S+ ++ EI
Sbjct: 1 DILRRNPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQ---EI 57
Query: 453 KALTEIRHRNIVKFYGFCSHPRHSFLVYE----CLER---GSLAEILSNDGSIKEFSWIV 505
+ E +H NIV ++G S+L E C+E GSL +I G + E
Sbjct: 58 FMVKECKHCNIVAYFG-------SYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQI-- 108
Query: 506 RTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565
V + L+Y+H +HRDI N+LL+ + +++DFG+A + +
Sbjct: 109 -AYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRK 164
Query: 566 EFAGTFGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGK------HPRDFISLLSSS 616
F GT ++APE+A K + CD+++ G+ A+E+ + + HP + L+S S
Sbjct: 165 SFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKS 224
Query: 617 S 617
+
Sbjct: 225 N 225
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 75.9 bits (186), Expect = 3e-15
Identities = 68/268 (25%), Positives = 114/268 (42%), Gaps = 31/268 (11%)
Query: 404 FDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNI 463
F + IG G V++G + V K L +E ++ + EI L++ +
Sbjct: 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE-DIQQEITVLSQCDSPYV 64
Query: 464 VKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHD 523
K+YG +++ E L GS ++L G + E +++ + L Y+H +
Sbjct: 65 TKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQI---ATILREILKGLDYLHSE 120
Query: 524 CFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMK 583
+HRDI + NVLLS E +++DFG+A L F GT ++APE+
Sbjct: 121 ---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSA 177
Query: 584 VTEKCDVYSFGVLALEVIKGK------HPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637
K D++S G+ A+E+ KG+ HP + L+ ++ P
Sbjct: 178 YDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNP--------------PTLEG 223
Query: 638 NIQDKLISILEVALLCLEESPESRPTMQ 665
N L +E CL + P RPT +
Sbjct: 224 NYSKPLKEFVEA---CLNKEPSFRPTAK 248
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 75.4 bits (185), Expect = 4e-15
Identities = 60/201 (29%), Positives = 100/201 (49%), Gaps = 24/201 (11%)
Query: 410 IGIGGQASVYRG---ELPSGEVVAVKKFHSLLLSEI---SVQREFLNEIKALTEIRHRNI 463
+G G +V +G S + VAVK +L ++ +++ E L E + ++ + I
Sbjct: 3 LGSGNFGTVKKGMYKMKKSEKTVAVK----ILKNDNNDPALKDELLREANVMQQLDNPYI 58
Query: 464 VKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHD 523
V+ G C LV E E G L + L + + E + T ++ V+ + Y+
Sbjct: 59 VRMIGIC-EAESWMLVMELAELGPLNKFLQKNKHVTEKNI---TELVHQVSMGMKYLEET 114
Query: 524 CFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFG-----YVAPEL 578
F VHRD++++NVLL +++ A++SDFG++K L + + A T G + APE
Sbjct: 115 NF---VHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK--AKTHGKWPVKWYAPEC 169
Query: 579 AYTMKVTEKCDVYSFGVLALE 599
K + K DV+SFGVL E
Sbjct: 170 MNYYKFSSKSDVWSFGVLMWE 190
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 75.5 bits (186), Expect = 6e-15
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 51/238 (21%)
Query: 447 EFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILS------NDGSIKE 500
+F+ EI L+E +H NIV Y + +++ E + G+L I+ + I+
Sbjct: 48 DFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRY 107
Query: 501 FSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560
V + + AL+++H ++HRD+ + N+LL+ + + +++DFG++ K
Sbjct: 108 --------VCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST 156
Query: 561 SSNWTEFAGTFGYVAPELAY--TMKVTE---KCDVYSFGVLALEVIKGKHP-------RD 608
F GT ++APE+ T K K D++S G+ +E+ + + P R
Sbjct: 157 LQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRV 216
Query: 609 FISLLSSSSSNMNLSLNEILDPRLPLP---SRNIQDKLISILEVALLCLEESPESRPT 663
+ +L S P L P S + D L S CL + P+ RPT
Sbjct: 217 LLKILKSEP------------PTLDQPSKWSSSFNDFLKS-------CLVKDPDDRPT 255
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 77.9 bits (192), Expect = 7e-15
Identities = 38/91 (41%), Positives = 49/91 (53%)
Query: 93 LDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEI 152
L + + G I + K + L ++N S N+I G+IPP +G + L LD S N G I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 153 PIELGNLKSLNYLVLNGNKLSGNLPRVLGSL 183
P LG L SL L LNGN LSG +P LG
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALGGR 513
|
Length = 623 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 75.5 bits (185), Expect = 8e-15
Identities = 53/192 (27%), Positives = 93/192 (48%), Gaps = 24/192 (12%)
Query: 422 ELPSGEVVAVKKFHSLLLSEISVQREFL-NEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480
E SG VAVK ++ +RE L NE+ + + +H+N+V+ Y +++
Sbjct: 42 EKHSGRQVAVK----MMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLM 97
Query: 481 ECLERGSLAEILSNDGSIKEFSWIVRTN------VIKSVANALSYMHHDCFPPIVHRDIS 534
E L+ G+L +I+S R N V +SV AL Y+H ++HRDI
Sbjct: 98 EFLQGGALTDIVSQ----------TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIK 144
Query: 535 SKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFG 594
S ++LL+ + ++SDFG + GT ++APE+ + D++S G
Sbjct: 145 SDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLG 204
Query: 595 VLALEVIKGKHP 606
++ +E++ G+ P
Sbjct: 205 IMVIEMVDGEPP 216
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 75.3 bits (186), Expect = 8e-15
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 410 IGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLN-----EIKALTEIRHRNI 463
+G G A VY+ +G +VA+KK + L E ++ +N EIK L E++H NI
Sbjct: 8 LGEGTYAVVYKARDKETGRIVAIKK---IKLGERKEAKDGINFTALREIKLLQELKHPNI 64
Query: 464 VKFYGFCSHPRHSFLVYECLERGSLAEILSN------DGSIKEFSWIVRTNVIKSVANAL 517
+ H + LV+E +E L +++ + IK S+++ T L
Sbjct: 65 IGLLDVFGHKSNINLVFEFME-TDLEKVIKDKSIVLTPADIK--SYMLMT------LRGL 115
Query: 518 SYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE 577
Y+H + I+HRD+ N+L++S+ +++DFG+A+ + T T Y APE
Sbjct: 116 EYLH-SNW--ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPE 172
Query: 578 LAY-TMKVTEKCDVYSFGVLALEVIKGK 604
L + D++S G + E++
Sbjct: 173 LLFGARHYGVGVDMWSVGCIFAELLLRV 200
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 78.0 bits (192), Expect = 8e-15
Identities = 57/193 (29%), Positives = 88/193 (45%), Gaps = 21/193 (10%)
Query: 425 SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFY--GFCSHPRHSFLVYEC 482
+G VA+K + E + F E + H NIV G P F V+E
Sbjct: 2 TGHEVAIKLLRTDAPEEEHQRARFRRETALCARLYHPNIVALLDSGEAP-PGLLFAVFEY 60
Query: 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS 542
+ +L E+L+ DG++ ++ V +AL+ H+ IVHRD+ +N+++S
Sbjct: 61 VPGRTLREVLAADGAL---PAGETGRLMLQVLDALACAHNQ---GIVHRDLKPQNIMVSQ 114
Query: 543 ---EYEARVSDFGIAKFLKPGSSNW--------TEFAGTFGYVAPELAYTMKVTEKCDVY 591
A+V DFGI L PG + TE GT Y APE VT D+Y
Sbjct: 115 TGVRPHAKVLDFGIGTLL-PGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLY 173
Query: 592 SFGVLALEVIKGK 604
++G++ LE + G+
Sbjct: 174 AWGLIFLECLTGQ 186
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 74.6 bits (184), Expect = 8e-15
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 410 IGIGGQASVYRGELPS-GEVVAVK--KFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
I G V+ + S G++ A+K K ++ + V + L E L++ + +VK
Sbjct: 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIR-KNQVDQ-VLTERDILSQAQSPYVVKL 58
Query: 467 YGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFP 526
Y ++ +LV E L G LA +L N GS+ E V I + AL Y+H +
Sbjct: 59 YYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDE---DVARIYIAEIVLALEYLHSN--- 112
Query: 527 PIVHRDISSKNVLLSSEYEARVSDFGIAKF--------LKPGSSNWTEFAGTFGYVAPEL 578
I+HRD+ N+L+ S +++DFG++K L GT Y+APE+
Sbjct: 113 GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEV 172
Query: 579 AYTMKVTEKCDVYSFGVLALEVIKGKHP 606
++ D +S G + E + G P
Sbjct: 173 ILGQGHSKTVDWWSLGCILYEFLVGIPP 200
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 74.5 bits (183), Expect = 1e-14
Identities = 76/274 (27%), Positives = 119/274 (43%), Gaps = 51/274 (18%)
Query: 410 IGIGGQASVYRGELPSGEV-VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
+G G VY S +V +A+K+ + E EI + ++HRNIV++ G
Sbjct: 16 LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHE---EIALHSYLKHRNIVQYLG 72
Query: 469 FCSHPRHSFLVYECLERGSLAEIL--------SNDGSIKEFSWIVRTNVIKSVANALSYM 520
S + E + GSL+ +L N+ +I ++ K + L Y+
Sbjct: 73 SDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYT--------KQILEGLKYL 124
Query: 521 HHDCFPPIVHRDISSKNVLLSSEYEA--RVSDFGIAKFLKPGSSNWTE-FAGTFGYVAPE 577
H + IVHRDI NVL+++ Y ++SDFG +K L G + TE F GT Y+APE
Sbjct: 125 HDN---QIVHRDIKGDNVLVNT-YSGVVKISDFGTSKRLA-GINPCTETFTGTLQYMAPE 179
Query: 578 LAYTMKVTEK--------CDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD 629
V +K D++S G +E+ GK P FI L ++ + + +I
Sbjct: 180 ------VIDKGPRGYGAPADIWSLGCTIVEMATGKPP--FIELGEPQAAMFKVGMFKI-H 230
Query: 630 PRLPLPSRNIQDKLISILEVALLCLEESPESRPT 663
P +P I L C E P+ R +
Sbjct: 231 PEIPESLSAEAKNFI------LRCFEPDPDKRAS 258
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 74.7 bits (183), Expect = 1e-14
Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 408 QCIGIGGQASVYRG-ELPSGEVV----AVKKFHSLLLSEISVQREFLNEIKALTEIRHRN 462
+ +G G +VY+G +P GE V A+K + + +V EF++E + + H +
Sbjct: 13 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV--EFMDEALIMASMDHPH 70
Query: 463 IVKFYGFCSHPRHSFLVYECLERGSLAEIL----SNDGSIKEFSWIVRTNVIKSVANALS 518
+V+ G C P LV + + G L + + N GS +W V+ +A +
Sbjct: 71 LVRLLGVCLSPTIQ-LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQ------IAKGMM 123
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF--GYVAP 576
Y+ +VHRD++++NVL+ S +++DFG+A+ L+ + G ++A
Sbjct: 124 YLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMAL 180
Query: 577 ELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFI 610
E + K T + DV+S+GV E++ G P D I
Sbjct: 181 ECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI 215
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 73.1 bits (179), Expect = 4e-14
Identities = 52/197 (26%), Positives = 96/197 (48%), Gaps = 26/197 (13%)
Query: 428 VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGS 487
+VAVK +L ++ +++F E + LT ++H +IVKFYG C +V+E ++ G
Sbjct: 37 LVAVK---ALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGD 93
Query: 488 LAEILSNDG-------------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDIS 534
L + L G + E ++ +A+ + Y+ F VHRD++
Sbjct: 94 LNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHF---VHRDLA 150
Query: 535 SKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAG----TFGYVAPELAYTMKVTEKCDV 590
++N L+ + ++ DFG+++ + S+++ G ++ PE K T + DV
Sbjct: 151 TRNCLVGANLLVKIGDFGMSRDVY--STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDV 208
Query: 591 YSFGVLALEVIK-GKHP 606
+SFGV+ E+ GK P
Sbjct: 209 WSFGVILWEIFTYGKQP 225
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Score = 72.9 bits (179), Expect = 5e-14
Identities = 73/301 (24%), Positives = 130/301 (43%), Gaps = 54/301 (17%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRGEL--PSGE-------VVAVKKFHSLLLSEISVQR 446
EI + F E +G G VY+GEL P+ + +K+ E VQ+
Sbjct: 1 EIPLSAVRFLEE--LGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-----EPKVQQ 53
Query: 447 EFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEIL------------SN 494
EF E + +++++H NIV G C+ + + +++E L G L E L S
Sbjct: 54 EFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESG 113
Query: 495 DGSIKEFSWIVR-TNVIKSVANALSYM--HHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551
D ++K ++ +A + Y+ HH VHRD++++N L+ ++SDF
Sbjct: 114 DETVKSSLDCSDFLHIAIQIAAGMEYLSSHH-----FVHRDLAARNCLVGEGLTVKISDF 168
Query: 552 GIAKFLKPGSSNWTEFAGT----FGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 606
G+++ + S+++ ++ PE K T + D++SFGV+ E+ G P
Sbjct: 169 GLSRDIY--SADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQP 226
Query: 607 RDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQT 666
S N + E++ R LP +D + + + C E P RP +
Sbjct: 227 YYGFS---------NQEVIEMIRSRQLLPCP--EDCPARVYALMIECWNEIPARRPRFKD 275
Query: 667 V 667
+
Sbjct: 276 I 276
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 72.7 bits (178), Expect = 6e-14
Identities = 66/258 (25%), Positives = 115/258 (44%), Gaps = 24/258 (9%)
Query: 425 SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHSFLVYEC 482
+GE VAVK + EI+ L + H NIVK+ G C+ L+ E
Sbjct: 32 TGEQVAVKSLKPESGGNHIA--DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEF 89
Query: 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS 542
L GSL E L + + ++ V + + Y+ + VHRD++++NVL+ S
Sbjct: 90 LPSGSLKEYLPRNKNKINLKQQLKYAV--QICKGMDYLGSRQY---VHRDLAARNVLVES 144
Query: 543 EYEARVSDFGIAKFLKPGSSNWT---EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALE 599
E++ ++ DFG+ K ++ +T + + APE K DV+SFGV E
Sbjct: 145 EHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYE 204
Query: 600 VI-----KGKHPRDFISLLSSSSSNMNLS-LNEILD--PRLPLPSRNIQDKLISILEVAL 651
++ + F+ ++ + M ++ L +L+ RLP P N +++ ++
Sbjct: 205 LLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPP-NCPEEVYQLMRK-- 261
Query: 652 LCLEESPESRPTMQTVCQ 669
C E P R T Q + +
Sbjct: 262 -CWEFQPSKRTTFQNLIE 278
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 72.6 bits (179), Expect = 6e-14
Identities = 62/217 (28%), Positives = 97/217 (44%), Gaps = 32/217 (14%)
Query: 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQRE---FLNEIKALTE 457
+F+ + +G G V SG+ A+K ++I ++ LNE + L
Sbjct: 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSK---AKIVKLKQVEHVLNEKRILQS 57
Query: 458 IRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIK----SV 513
IRH +V YG + +LV E + G L L G E V + V
Sbjct: 58 IRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPE-------PVARFYAAQV 110
Query: 514 ANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGY 573
AL Y+H IV+RD+ +N+LL S+ +++DFG AK +K + +T GT Y
Sbjct: 111 VLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRT--YT-LCGTPEY 164
Query: 574 VAPEL----AYTMKVTEKCDVYSFGVLALEVIKGKHP 606
+APE+ Y V D ++ G+L E++ G P
Sbjct: 165 LAPEIILSKGYGKAV----DWWALGILIYEMLAGYPP 197
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 71.8 bits (176), Expect = 7e-14
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Query: 403 NFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLS-EISVQREFL-NEIKALTEIR 459
N+ + +G G VY ++ +G +AVK+ S E + L EI+ L ++
Sbjct: 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ 62
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSY 519
H IV++YG + E + GS+ + L G++ E V + + + Y
Sbjct: 63 HERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTE---TVTRKYTRQILEGVEY 119
Query: 520 MHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT---EFAGTFGYVAP 576
+H + IVHRDI N+L S ++ DFG +K L+ S+ T GT +++P
Sbjct: 120 LHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSP 176
Query: 577 ELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
E+ K DV+S G +E++ K P
Sbjct: 177 EVISGEGYGRKADVWSVGCTVVEMLTEKPP 206
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 72.4 bits (178), Expect = 8e-14
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 39/264 (14%)
Query: 429 VAVKKFHSLLLSEISVQR-EFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGS 487
VAVK L R +FL E+K L+ + NI + G C+ ++ E +E G
Sbjct: 49 VAVKV---LRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGD 105
Query: 488 LAEILSNDGSIKEFSWIVRTNVIKSVANALSY-------------MHHDCFPPIVHRDIS 534
L + L + T+ + + +LS+ M + VHRD++
Sbjct: 106 LNQFLQ--------KHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLA 157
Query: 535 SKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT----FGYVAPELAYTMKVTEKCDV 590
++N L+ Y +++DFG+++ L SS++ G ++A E K T K DV
Sbjct: 158 TRNCLVGKNYTIKIADFGMSRNLY--SSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDV 215
Query: 591 YSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR---LPLPSRNIQDKLISIL 647
++FGV E++ + + L+ N D R LP P +D I
Sbjct: 216 WAFGVTLWEILTLCREQPY-EHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKD----IY 270
Query: 648 EVALLCLEESPESRPTMQTVCQLL 671
E+ L C E RPT + + L
Sbjct: 271 ELMLECWRRDEEDRPTFREIHLFL 294
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 71.2 bits (174), Expect = 9e-14
Identities = 65/262 (24%), Positives = 115/262 (43%), Gaps = 30/262 (11%)
Query: 408 QCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFY 467
+ +G G V++G L VAVK L E+ ++ FL+E + L + H NIVK
Sbjct: 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIK--FLSEARILKQYDHPNIVKLI 58
Query: 468 GFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH-HDCFP 526
G C+ + ++V E + G L + +V+ + A ++Y+ +C
Sbjct: 59 GVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFAL--DAAAGMAYLESKNC-- 114
Query: 527 PIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG---SSNWTEFAGTFGYVAPELAYTMK 583
+HRD++++N L+ ++SDFG+++ G SS + + APE +
Sbjct: 115 --IHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIP--IKWTAPEALNYGR 170
Query: 584 VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-NLSLNEILDP--RLPLPSRNIQ 640
+ + DV+S+G+L E SL M N E ++ R+ P +
Sbjct: 171 YSSESDVWSYGILLWET---------FSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPD 221
Query: 641 DKLISILEVALLCLEESPESRP 662
D + +V C + PE+RP
Sbjct: 222 D----VYKVMQRCWDYKPENRP 239
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 1e-13
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 117 LNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNL 176
L + G IP +I KL L ++ S N I G IP LG++ SL L L+ N +G++
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 177 PRVLGSLSELEYLDLSTNKLSGSIPETLGN-LLKVHYLNLSNN 218
P LG L+ L L+L+ N LSG +P LG LL N ++N
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTDN 525
|
Length = 623 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 71.6 bits (175), Expect = 1e-13
Identities = 59/220 (26%), Positives = 108/220 (49%), Gaps = 31/220 (14%)
Query: 410 IGIGGQASVYRGE----LPSGE--VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNI 463
+G G V+ E LP + +VAVK +L + S +++F E + LT ++H++I
Sbjct: 13 LGEGAFGKVFLAECHNLLPEQDKMLVAVK---ALKEASESARQDFQREAELLTVLQHQHI 69
Query: 464 VKFYGFCSHPRHSFLVYECLERGSL----------AEIL--SNDGSIKEFSWIVRTNVIK 511
V+FYG C+ R +V+E + G L A+IL D + + + +
Sbjct: 70 VRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIAS 129
Query: 512 SVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAG-- 569
+A+ + Y+ F VHRD++++N L+ ++ DFG+++ + S+++ G
Sbjct: 130 QIASGMVYLASLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIY--STDYYRVGGRT 184
Query: 570 --TFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 606
++ PE K T + D++SFGV+ E+ GK P
Sbjct: 185 MLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQP 224
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 72.0 bits (176), Expect = 1e-13
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 10/205 (4%)
Query: 403 NFDAEQCIGIGGQASVYR-GELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
+F+ +G G V++ PSG ++A K H L + +++ + + E++ L E
Sbjct: 6 DFEKISELGAGNGGVVFKVSHKPSGLIMARKLIH--LEIKPAIRNQIIRELQVLHECNSP 63
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH 521
IV FYG + E ++ GSL ++L G I E + V +V L+Y+
Sbjct: 64 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE---QILGKVSIAVIKGLTYLR 120
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT 581
I+HRD+ N+L++S E ++ DFG++ L +N F GT Y++PE
Sbjct: 121 EK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQG 176
Query: 582 MKVTEKCDVYSFGVLALEVIKGKHP 606
+ + D++S G+ +E+ G++P
Sbjct: 177 THYSVQSDIWSMGLSLVEMAIGRYP 201
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 70.9 bits (173), Expect = 2e-13
Identities = 71/284 (25%), Positives = 131/284 (46%), Gaps = 44/284 (15%)
Query: 402 KNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
++F+ Q IG G VY+ + +GE+ A+K + +V ++ EI + + +H
Sbjct: 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQ---EIIMMKDCKH 65
Query: 461 RNIVKFYGFCSHPRHSFLVYECLER---GSLAEILSNDGSIKEFSWIVRTNVIKSVANAL 517
NIV ++G S+ R L + C+E GSL +I G + E V + L
Sbjct: 66 SNIVAYFG--SYLRRDKL-WICMEFCGGGSLQDIYHVTGPLSESQI---AYVSRETLQGL 119
Query: 518 SYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE 577
Y+H +HRDI N+LL+ +++DFG++ + + F GT ++APE
Sbjct: 120 YYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPE 176
Query: 578 LAYTMK---VTEKCDVYSFGVLALEVIKGK------HPRDFISLLSSSSSNMNLSLNEIL 628
+A + + CD+++ G+ A+E+ + + HP + L++ S+
Sbjct: 177 VAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSN---------FQ 227
Query: 629 DPRLPLPSRNIQDKLI---SILEVALLCLEESPESRPTMQTVCQ 669
P+L +DK+ S + L ++P+ RPT + + Q
Sbjct: 228 PPKL-------KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Score = 70.5 bits (173), Expect = 2e-13
Identities = 71/298 (23%), Positives = 116/298 (38%), Gaps = 72/298 (24%)
Query: 410 IGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQR---EFLNEIKALTEIRH 460
+G G VY G VAVK L E ++ +FL E +++ H
Sbjct: 14 LGHGAFGEVYEGLYRGRDGDAVELQVAVKT-----LPESCSEQDESDFLMEALIMSKFNH 68
Query: 461 RNIVKFYGFC--SHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIK---SVA 514
+NIV+ G PR F++ E + G L L N + S + +++ VA
Sbjct: 69 QNIVRLIGVSFERLPR--FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVA 126
Query: 515 NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARV---SDFGIAK-------FLKPGSS-- 562
Y+ + F +HRDI+++N LL+ + RV +DFG+A+ + K G +
Sbjct: 127 KGCKYLEENHF---IHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAML 183
Query: 563 --NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-------GKHPRDFISLL 613
W PE T K DV+SFGVL E+ G+ ++ + +
Sbjct: 184 PIKWM---------PPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFV 234
Query: 614 SSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ LDP P + + C + +PE RP T+ + +
Sbjct: 235 TGGGR---------LDPPKGCPGP--------VYRIMTDCWQHTPEDRPNFATILERI 275
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 72.5 bits (178), Expect = 3e-13
Identities = 52/174 (29%), Positives = 68/174 (39%), Gaps = 30/174 (17%)
Query: 189 LDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEI 248
L L L G IP + L + +NLS N R P L + L LDLS+N G I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 249 PPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQ 308
P + L SL LN++ N+LSG +P+ G L N T
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALGGR-----------LLHRASFNFT-------- 523
Query: 309 ALRGNRGLCGDVEGFQSCKAFVSQKHVFENKWFLIIIPILGVFALLFFVIGIIF 362
N GLCG + G ++C +S I I A LF VI +
Sbjct: 524 ---DNAGLCG-IPGLRACGPHLSVGAK-------IGIAFGVSVAFLFLVICAMC 566
|
Length = 623 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 3e-13
Identities = 61/254 (24%), Positives = 110/254 (43%), Gaps = 27/254 (10%)
Query: 428 VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGS 487
+V VK + ++Q EF E+ ++ H+N+V+ G C +++ E + G
Sbjct: 37 LVLVKALQKT--KDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGD 94
Query: 488 LAEIL------SNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS 541
L + L S + + +A + ++ + F VHRD++++N L+S
Sbjct: 95 LKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARF---VHRDLAARNCLVS 151
Query: 542 SEYEARVSDFGIAKFLKPGSSNWTEFAGTFG---YVAPELAYTMKVTEKCDVYSFGVLAL 598
S+ E +VS ++K +S + + ++APE + K DV+SFGVL
Sbjct: 152 SQREVKVSLLSLSK--DVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMW 209
Query: 599 EVI-KGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEES 657
EV +G+ P F L S +N L LP+P +L ++ C +
Sbjct: 210 EVFTQGELP--FYGL--SDEEVLNRLQAGKL--ELPVPE-GCPSRLYKLM---TRCWAVN 259
Query: 658 PESRPTMQTVCQLL 671
P+ RP+ + L
Sbjct: 260 PKDRPSFSELVSAL 273
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 70.5 bits (173), Expect = 3e-13
Identities = 57/186 (30%), Positives = 96/186 (51%), Gaps = 15/186 (8%)
Query: 424 PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG-FCSHPRHSFLVYEC 482
PSG ++A K H L + +++ + + E+K L E IV FYG F S S + E
Sbjct: 24 PSGLIMARKLIH--LEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM-EH 80
Query: 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH--HDCFPPIVHRDISSKNVLL 540
++ GSL ++L G I E + + +V L+Y+ H I+HRD+ N+L+
Sbjct: 81 MDGGSLDQVLKKAGRIPE---NILGKISIAVLRGLTYLREKHK----IMHRDVKPSNILV 133
Query: 541 SSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEV 600
+S E ++ DFG++ L +N F GT Y++PE T + D++S G+ +E+
Sbjct: 134 NSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEM 191
Query: 601 IKGKHP 606
G++P
Sbjct: 192 AIGRYP 197
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 70.1 bits (172), Expect = 4e-13
Identities = 71/279 (25%), Positives = 121/279 (43%), Gaps = 55/279 (19%)
Query: 414 GQAS---VYRG---ELPSGEV---VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIV 464
GQ S VY G + GE VA+K + + + + EFLNE + E ++V
Sbjct: 15 GQGSFGMVYEGLAKGVVKGEPETRVAIKTVNEN--ASMRERIEFLNEASVMKEFNCHHVV 72
Query: 465 KFYGFCSHPRHSFLVYECLERGSLAEIL----SNDGSIKEFSWIVRTNVIK---SVANAL 517
+ G S + + +V E + +G L L + I+ +A+ +
Sbjct: 73 RLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGM 132
Query: 518 SYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK------FLKPGSS-----NWTE 566
+Y+ F VHRD++++N +++ + ++ DFG+ + + + G W
Sbjct: 133 AYLAAKKF---VHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW-- 187
Query: 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLN 625
+APE T K DV+SFGV+ E+ + P + L SN + L
Sbjct: 188 -------MAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQP--YQGL-----SNEEV-LK 232
Query: 626 EILDPR-LPLPSRNIQDKLISILEVALLCLEESPESRPT 663
++D L LP N DKL LE+ +C + +P+ RPT
Sbjct: 233 FVIDGGHLDLPE-NCPDKL---LELMRMCWQYNPKMRPT 267
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 69.5 bits (170), Expect = 4e-13
Identities = 65/259 (25%), Positives = 118/259 (45%), Gaps = 24/259 (9%)
Query: 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQRE-FLNEIKALTEIRHRNIVKFYG 468
+G G V+ G VA+K L + S+ E FL E + +++H +V+ Y
Sbjct: 14 LGAGQFGEVWMGYYNGHTKVAIKS-----LKQGSMSPEAFLAEANLMKQLQHPRLVRLYA 68
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPI 528
+ +++ E +E GSL + L IK + ++ +A ++++ +
Sbjct: 69 VVTQ-EPIYIITEYMENGSLVDFLKTPEGIK-LTINKLIDMAAQIAEGMAFIERKNY--- 123
Query: 529 VHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAG-TFGYVAPELAYTMKVTEK 587
+HRD+ + N+L+S +++DFG+A+ ++ E A + APE T K
Sbjct: 124 IHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 183
Query: 588 CDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISI 646
DV+SFG+L E++ G+ P +N + N R+P P ++ +
Sbjct: 184 SDVWSFGILLTEIVTYGRIP-------YPGMTNPEVIQNLERGYRMPRPDNCPEE----L 232
Query: 647 LEVALLCLEESPESRPTMQ 665
E+ LC +E PE RPT +
Sbjct: 233 YELMRLCWKEKPEERPTFE 251
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 71.2 bits (174), Expect = 5e-13
Identities = 74/284 (26%), Positives = 114/284 (40%), Gaps = 21/284 (7%)
Query: 8 IPPSVGNFT-NLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
IPP +G NLK L L N + S+P + NL L NL++ N L +P+ L NL++L
Sbjct: 131 IPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNL 188
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITG 126
N + L N ++ ++ + L LD+S NN E+ SS + L L S N +
Sbjct: 189 NNLDLSGNKIS-DLPPEIELLSALEELDLS-NNSIIELLSSLSNLKNLSGLELSNNKLED 246
Query: 127 SIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSEL 186
IG L L LD S NQI LG+L +L L L+GN LS LP ++ L
Sbjct: 247 LPES-IGNLSNLETLDLSNNQI--SSISSLGSLTNLRELDLSGNSLSNALP----LIALL 299
Query: 187 EYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGG 246
L L ++ L + N + + L + +
Sbjct: 300 LLLLELLLNLLLTLKALELKLNSILLNN---------NILSNGETSSPEALSILESLNNL 350
Query: 247 EIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYN 290
+ +L + V + N G + + ++YN
Sbjct: 351 WTLDNALDESNLNRYIVKNPNAIGSLLDLVKKHVNQLLEKVNYN 394
|
Length = 394 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 69.2 bits (169), Expect = 5e-13
Identities = 69/276 (25%), Positives = 122/276 (44%), Gaps = 36/276 (13%)
Query: 403 NFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN 462
++ + IG G +Y + S V K L + + E+ L +++H N
Sbjct: 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPN 60
Query: 463 IVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSI-----KEFSWIVRTNVIKSVANAL 517
IV F+ F+V E + G L + ++ + + SW V+ ++ L
Sbjct: 61 IVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQ------ISLGL 114
Query: 518 SYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFGIAKFLKPGSSNWTEFA----GTFG 572
++H I+HRDI S+N+ LS A++ DFGIA+ L ++ E A GT
Sbjct: 115 KHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQL----NDSMELAYTCVGTPY 167
Query: 573 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNE-ILDPR 631
Y++PE+ K D++S G + E+ KHP + ++ + L + + P
Sbjct: 168 YLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFE-----GNNLHQLVLKICQGYFAPI 222
Query: 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTV 667
P SR+++ LIS L + SP RP++ ++
Sbjct: 223 SPNFSRDLR-SLISQL------FKVSPRDRPSITSI 251
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 5e-13
Identities = 65/279 (23%), Positives = 131/279 (46%), Gaps = 26/279 (9%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKAL 455
EI R + + + +G G V+ VAVK ++ +SV+ FL E +
Sbjct: 2 EIPRESLKLEKK--LGAGQFGEVWMATYNKHTKVAVK---TMKPGSMSVE-AFLAEANVM 55
Query: 456 TEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVA 514
++H +VK + + +++ E + +GSL + L S++GS + ++ + +A
Sbjct: 56 KTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI--DFSAQIA 112
Query: 515 NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAG-TFGY 573
++++ + +HRD+ + N+L+S+ +++DFG+A+ ++ E A +
Sbjct: 113 EGMAFIEQRNY---IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW 169
Query: 574 VAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRL 632
APE T K DV+SFG+L +E++ G+ P S+ + +L R+
Sbjct: 170 TAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYP-----GMSNPEVIRALER--GYRM 222
Query: 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
P P ++ + + + C + PE RPT + + +L
Sbjct: 223 PRPENCPEE----LYNIMMRCWKNRPEERPTFEYIQSVL 257
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 7e-13
Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 44/264 (16%)
Query: 428 VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGS 487
+VAVK +L + + +++F E + LT ++H +IVKFYG C +V+E ++ G
Sbjct: 37 LVAVK---TLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGD 93
Query: 488 LAEILSNDG----------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKN 537
L + L G E + ++ + +A + Y+ F VHRD++++N
Sbjct: 94 LNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHF---VHRDLATRN 150
Query: 538 VLLSSEYEARVSDFGIAKFLKPGSSNWTEFAG----TFGYVAPELAYTMKVTEKCDVYSF 593
L+ ++ DFG+++ + S+++ G ++ PE K T + DV+S
Sbjct: 151 CLVGENLLVKIGDFGMSRDVY--STDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSL 208
Query: 594 GVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILD-----PRLPLPSRNIQDKLISIL 647
GV+ E+ GK P LS NE+++ L P ++ +
Sbjct: 209 GVVLWEIFTYGKQPW------------YQLSNNEVIECITQGRVLQRPRTCPKE----VY 252
Query: 648 EVALLCLEESPESRPTMQTVCQLL 671
++ L C + P R ++ + LL
Sbjct: 253 DLMLGCWQREPHMRLNIKEIHSLL 276
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Score = 68.8 bits (168), Expect = 8e-13
Identities = 51/220 (23%), Positives = 99/220 (45%), Gaps = 26/220 (11%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQ--REFLNEIKALTEIRHRNIVKF 466
+G G +V++G +P G+ + + + Q +E + + A+ + H IV+
Sbjct: 15 LGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRL 74
Query: 467 YGFCSHPRHSFLVYECLERGSLAE-ILSNDGSIKE---FSWIVRTNVIKSVANALSYMHH 522
G C LV + GSL + + + S+ +W V+ +A + Y+
Sbjct: 75 LGICPGASLQ-LVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQ------IAKGMYYLEE 127
Query: 523 DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAY 580
+VHR+++++N+LL S+ +++DFG+A L P ++E ++A E
Sbjct: 128 HR---MVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESIL 184
Query: 581 TMKVTEKCDVYSFGVLALEVIK-------GKHPRDFISLL 613
+ T + DV+S+GV E++ G P + LL
Sbjct: 185 FGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLL 224
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 1e-12
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 9/183 (4%)
Query: 424 PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECL 483
PSG ++A K H L + +++ + + E++ L E IV FYG + E +
Sbjct: 28 PSGLIMARKLIH--LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 85
Query: 484 ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543
+ GSL ++L I E + V +V L+Y+ I+HRD+ N+L++S
Sbjct: 86 DGGSLDQVLKEAKRIPEE---ILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSR 140
Query: 544 YEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG 603
E ++ DFG++ L +N F GT Y++PE + + D++S G+ +E+ G
Sbjct: 141 GEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIG 198
Query: 604 KHP 606
++P
Sbjct: 199 RYP 201
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 68.4 bits (167), Expect = 1e-12
Identities = 67/258 (25%), Positives = 121/258 (46%), Gaps = 24/258 (9%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
+G G +VY+ L + ++AVK L + +Q++ ++E++ L + I+ FYG
Sbjct: 9 LGHGNGGTVYKAYHLLTRRILAVKVI--PLDITVELQKQIMSELEILYKCDSPYIIGFYG 66
Query: 469 -FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPP 527
F R S + E ++ GSL I E V + +V L+Y+
Sbjct: 67 AFFVENRIS-ICTEFMDGGSLDVY----RKIPEH---VLGRIAVAVVKGLTYLWS---LK 115
Query: 528 IVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEK 587
I+HRD+ N+L+++ + ++ DFG++ L +S + GT Y+APE +
Sbjct: 116 ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLV--NSIAKTYVGTNAYMAPERISGEQYGIH 173
Query: 588 CDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNE-ILDPRLP-LPSRNIQDKLIS 645
DV+S G+ +E+ G+ P + + + S M L L + I+D P LP +K +
Sbjct: 174 SDVWSLGISFMELALGRFP--YPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVH 231
Query: 646 ILEVALLCLEESPESRPT 663
+ C+ + P+ RP
Sbjct: 232 FIT---QCMRKQPKERPA 246
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Score = 68.3 bits (167), Expect = 1e-12
Identities = 75/274 (27%), Positives = 119/274 (43%), Gaps = 37/274 (13%)
Query: 410 IGIGGQASVYRGELP------SGEV-VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN 462
+G G VY G SG + VAVK + ++EFL E ++ H N
Sbjct: 3 LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKG--ATDQEKKEFLKEAHLMSNFNHPN 60
Query: 463 IVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRT-----NVIKSVANAL 517
IVK G C +++ E +E G L L D ++ F + T ++ VA
Sbjct: 61 IVKLLGVCLLNEPQYIIMELMEGGDLLSYL-RDARVERFGPPLLTLKELLDICLDVAKGC 119
Query: 518 SYMHHDCFPPIVHRDISSKNVLLSSE-YEAR----VSDFGIAKFLKPGSSNWTEFAGTFG 572
Y+ F +HRD++++N L+S + Y+A + DFG+A+ + E G
Sbjct: 120 VYLEQMHF---IHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLP 176
Query: 573 --YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILD 629
++APE K T + DV+SFGVL E++ G+ P + +N + +
Sbjct: 177 VRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQP-------YPALNNQEVLQHVTAG 229
Query: 630 PRLPLPSRNIQDKLISILEVALLCLEESPESRPT 663
RL P N DK+ ++ C + P RPT
Sbjct: 230 GRLQKP-ENCPDKIYQLM---TNCWAQDPSERPT 259
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 2e-12
Identities = 35/79 (44%), Positives = 48/79 (60%)
Query: 150 GEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLK 209
G IP ++ L+ L + L+GN + GN+P LGS++ LE LDLS N +GSIPE+LG L
Sbjct: 432 GFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTS 491
Query: 210 VHYLNLSNNQFRKEFPVEL 228
+ LNL+ N P L
Sbjct: 492 LRILNLNGNSLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 69.5 bits (170), Expect = 2e-12
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 16/158 (10%)
Query: 520 MHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPE 577
+HH ++HRDI S N+LL S ++ DFG +K S+ F GT YVAPE
Sbjct: 156 VHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPE 215
Query: 578 LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRL-PLPS 636
+ ++K D++S GVL E++ K P D NM +++ L R PLP
Sbjct: 216 IWRRKPYSKKADMFSLGVLLYELLTLKRPFD--------GENMEEVMHKTLAGRYDPLPP 267
Query: 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQL-LCK 673
+I ++ I+ ALL + P+ RP+ + + +CK
Sbjct: 268 -SISPEMQEIVT-ALLSSD--PKRRPSSSKLLNMPICK 301
|
Length = 496 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 67.3 bits (164), Expect = 2e-12
Identities = 50/173 (28%), Positives = 86/173 (49%), Gaps = 14/173 (8%)
Query: 440 SEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIK 499
+E SV+ E + E + + ++ + IV+ G C LV E G L + LS
Sbjct: 34 NEKSVRDEMMREAEIMHQLDNPYIVRMIGVC-EAEALMLVMEMASGGPLNKFLSGKKDEI 92
Query: 500 EFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559
S +V ++ V+ + Y+ F VHRD++++NVLL +++ A++SDFG++K L
Sbjct: 93 TVSNVVE--LMHQVSMGMKYLEGKNF---VHRDLAARNVLLVNQHYAKISDFGLSKALGA 147
Query: 560 GSSNWTEFAGTFG-----YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHP 606
S + A + G + APE K + + DV+S+G+ E G+ P
Sbjct: 148 DDSYYK--ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKP 198
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 67.7 bits (165), Expect = 2e-12
Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 12/181 (6%)
Query: 427 EVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERG 486
E+VA+KKF +E V+ L E+K L ++ NIV+ +LV+E +E+
Sbjct: 27 EIVAIKKFKDSEENE-EVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKN 85
Query: 487 SLAEILSN--DGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY 544
L E+L +G E VR+ + + + A+ + H + IVHRDI +N+L+S
Sbjct: 86 ML-ELLEEMPNGVPPE---KVRSYIYQLI-KAIHWCHKN---DIVHRDIKPENLLISHND 137
Query: 545 EARVSDFGIAKFLKPGS-SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG 603
++ DFG A+ L GS +N+TE+ T Y +PEL + D++S G + E+ G
Sbjct: 138 VLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDG 197
Query: 604 K 604
+
Sbjct: 198 Q 198
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 67.7 bits (165), Expect = 3e-12
Identities = 65/281 (23%), Positives = 119/281 (42%), Gaps = 52/281 (18%)
Query: 423 LPSGEVVAVKKFHSLLLSEISVQ---REFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479
VAVK +L E + R+ L+E L ++ H +++K YG CS L+
Sbjct: 27 RAGYTTVAVK-----MLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLI 81
Query: 480 YECLERGSLAEIL-----------SNDGSIKEFSWIVRTNVIKSVANALSY-------MH 521
E + GSL L +DG+ ++ + +S+ M
Sbjct: 82 VEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQ 141
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF--GYVAPELA 579
+ +VHRD++++NVL++ + ++SDFG+++ + S G ++A E
Sbjct: 142 YLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESL 201
Query: 580 YTMKVTEKCDVYSFGVLALEVIK-------GKHPRDFISLLSSSSSNMNLSLNEILDPRL 632
+ T + DV+SFGVL E++ G P +LL + R+
Sbjct: 202 FDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGY-------------RM 248
Query: 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673
P N +++ +++ L C ++ P+ RPT + + L K
Sbjct: 249 ERPE-NCSEEMYNLM---LTCWKQEPDKRPTFADISKELEK 285
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 68.1 bits (167), Expect = 3e-12
Identities = 70/260 (26%), Positives = 108/260 (41%), Gaps = 53/260 (20%)
Query: 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKF----HSLLLSEISVQREFLNEIKALT 456
+ IG G V P+G VA+KK H QR L EIK L
Sbjct: 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTF-----CQRT-LREIKILR 58
Query: 457 EIRHRNIVKFY------GFCSHPRHSFLVYECLE----RGSLAEILSNDGSIKEFSW-IV 505
+H NI+ F S ++V E +E + + LSND I+ F + I+
Sbjct: 59 RFKHENIIGILDIIRPPSFESF-NDVYIVQELMETDLYKLIKTQHLSND-HIQYFLYQIL 116
Query: 506 RTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN-- 563
R L Y+H ++HRD+ N+LL++ + ++ DFG+A+ P +
Sbjct: 117 R---------GLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTG 164
Query: 564 -WTEFAGTFGYVAPELAYTMK-VTEKCDVYSFGVLALEVIK------GKHPRDFISL--- 612
TE+ T Y APE+ K T+ D++S G + E++ GK ++L
Sbjct: 165 FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILG 224
Query: 613 -LSSSSSNMNLSLNEILDPR 631
L + S LN I+ R
Sbjct: 225 VLGTPSQE---DLNCIISLR 241
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 67.3 bits (164), Expect = 3e-12
Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 22/226 (9%)
Query: 395 EEIIRATKNFDAEQCIGIGGQASVYR-GELPSGEVVAVKKFHSLLLSEISVQREFLNEIK 453
E + T ++ + IG G VY+ G + AVK + + ++ E+ N ++
Sbjct: 15 ESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEY-NILQ 73
Query: 454 ALTEIRHRNIVKFYGFCSHPRHS-----FLVYECLERGSLAEILSNDGSIK---EFSWIV 505
+L H N+VKFYG +LV E GS+ E++ G + +
Sbjct: 74 SLPN--HPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVK--GLLICGQRLDEAM 129
Query: 506 RTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565
+ ++ L ++H++ I+HRD+ N+LL++E ++ DFG++ L
Sbjct: 130 ISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRN 186
Query: 566 EFAGTFGYVAPEL-----AYTMKVTEKCDVYSFGVLALEVIKGKHP 606
GT ++APE+ Y +CDV+S G+ A+E+ G P
Sbjct: 187 TSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPP 232
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 67.9 bits (166), Expect = 3e-12
Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG G +VY+ P+G + A+K + E +V+R+ EI+ L ++ H N+VK +
Sbjct: 82 IGSGAGGTVYKVIHRPTGRLYALKVIYGN--HEDTVRRQICREIEILRDVNHPNVVKCHD 139
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGS-IKEFSWIVRTNVIKSVANALSYMHHDCFPP 527
H ++ E ++ GSL +G+ I + ++ +V + + + ++Y+H
Sbjct: 140 MFDHNGEIQVLLEFMDGGSL------EGTHIADEQFL--ADVARQILSGIAYLHRR---H 188
Query: 528 IVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE-----LAYTM 582
IVHRDI N+L++S +++DFG+++ L GT Y++PE L +
Sbjct: 189 IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGA 248
Query: 583 KVTEKCDVYSFGVLALEVIKGKHP 606
D++S GV LE G+ P
Sbjct: 249 YDGYAGDIWSLGVSILEFYLGRFP 272
|
Length = 353 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 66.7 bits (163), Expect = 4e-12
Identities = 79/278 (28%), Positives = 121/278 (43%), Gaps = 42/278 (15%)
Query: 408 QCIGIGGQASVYRG--ELPSGEV--VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNI 463
+CIG G VY+G P E VAVK + + SV+ +FL E + + H +I
Sbjct: 12 RCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNC--TSPSVREKFLQEAYIMRQFDHPHI 69
Query: 464 VKFYGFCSHPRHSFLVYECLERGSLAEILS-NDGSIKEFSWIVRTNVIKSVANALSYMHH 522
VK G + ++V E G L L N S+ S I+ ++ AL+Y+
Sbjct: 70 VKLIGVITENP-VWIVMELAPLGELRSYLQVNKYSLDLASLIL---YSYQLSTALAYLES 125
Query: 523 DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF--GYVAPELAY 580
F VHRDI+++NVL+SS ++ DFG++++L+ S + G ++APE
Sbjct: 126 KRF---VHRDIAARNVLVSSPDCVKLGDFGLSRYLED-ESYYKASKGKLPIKWMAPESIN 181
Query: 581 TMKVTEKCDVYSFGVLALEVIK-GKHP------RDFISLLSSSSSNMNLSLNEILDPRLP 633
+ T DV+ FGV E++ G P D I + + RLP
Sbjct: 182 FRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE-------------RLP 228
Query: 634 LPSRNIQDKLISILEVALLCLEESPESRPTM-QTVCQL 670
+P N L S++ C P RP + QL
Sbjct: 229 MPP-NCPPTLYSLMT---KCWAYDPSKRPRFTELKAQL 262
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 67.0 bits (164), Expect = 6e-12
Identities = 61/251 (24%), Positives = 108/251 (43%), Gaps = 43/251 (17%)
Query: 403 NFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
+ + IG G V + SG+ VA+KK ++ + L E+K L +H
Sbjct: 6 RYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKI-PHAFDVPTLAKRTLRELKILRHFKHD 64
Query: 462 NIVK----FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKE------FSWIVRTNVIK 511
NI+ + + ++V + +E L I+ +D + E ++R
Sbjct: 65 NIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLR----- 118
Query: 512 SVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN----WTEF 567
L Y+H ++HRD+ N+L++ + E R+ DFG+A+ L + TE+
Sbjct: 119 ----GLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEY 171
Query: 568 AGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVI------KGKHPRD----FISLLSSS 616
T Y APEL ++ + T D++S G + E++ GK+ +S+L S
Sbjct: 172 VATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSP 231
Query: 617 SSNMNLSLNEI 627
S + LN I
Sbjct: 232 SEEV---LNRI 239
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 66.1 bits (161), Expect = 6e-12
Identities = 70/278 (25%), Positives = 114/278 (41%), Gaps = 29/278 (10%)
Query: 410 IGIGGQASVYRGELPSGEVVA---VKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
IG G V GE G A VK+ + + Q FL E++ E+ H N+++
Sbjct: 3 IGNGWFGKVLLGEAHRGMSKARVVVKELRAS--ATPDEQLLFLQEVQPYRELNHPNVLQC 60
Query: 467 YGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSW-IVRTNVIKSVANALSYMHHDC 524
G C LV E G L L SN G + + + V + VA+ L ++H
Sbjct: 61 LGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD 120
Query: 525 FPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE--FAGTFGYVAPELA--- 579
F +H D++ +N L+++ ++ D+G+A P T+ A ++APEL
Sbjct: 121 F---IHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIR 177
Query: 580 ----YTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634
T+K +++S GV E+ P S+ + + + + L
Sbjct: 178 GQDLLPKDQTKKSNIWSLGVTMWELFTAADQP-------YPDLSDEQVLKQVVREQDIKL 230
Query: 635 PSRNIQDKLIS-ILEVALLCLEESPESRPTMQTVCQLL 671
P + K EV C PE+RPT + V +LL
Sbjct: 231 PKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 1e-11
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 9/157 (5%)
Query: 450 NEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNV 509
NE + L E+ H I++ + R +++ E + G L L N G + + +
Sbjct: 50 NEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASE 109
Query: 510 IKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAG 569
I AL Y+H IV+RD+ +N+LL E +++DFG AK L+ WT G
Sbjct: 110 IVC---ALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLR--DRTWT-LCG 160
Query: 570 TFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
T Y+APE+ + + D ++ G+L E++ G P
Sbjct: 161 TPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPP 197
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 1e-11
Identities = 65/269 (24%), Positives = 119/269 (44%), Gaps = 49/269 (18%)
Query: 421 GELPSGEVVAVKKFHS---LLLSEISVQR-------EFLNEIKALTEIRHRNIVKFYGFC 470
GE G+ + VK ++ EI++ + E E+ L+ ++H NIV++
Sbjct: 9 GEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESF 68
Query: 471 SHPRHSFLVYECLERGSLAEILSNDGSI-----KEFSWIVRTNVIKSVANALSYMHHDCF 525
+ ++V + E G L + ++ + + W V+ + AL ++H
Sbjct: 69 EENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQ------ICLALKHVHDR-- 120
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA----GTFGYVAPELAYT 581
I+HRDI S+N+ L+ + ++ DFGIA+ L ++ E A GT Y++PE+
Sbjct: 121 -KILHRDIKSQNIFLTKDGTIKLGDFGIARVL----NSTVELARTCIGTPYYLSPEICEN 175
Query: 582 MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-NLSLNEILDPRLPLPSRNIQ 640
K D+++ G + E+ KH + + NM NL L I P+ S
Sbjct: 176 RPYNNKSDIWALGCVLYEMCTLKH--------AFEAGNMKNLVLKIIRGSYPPVSSHYSY 227
Query: 641 D--KLISILEVALLCLEESPESRPTMQTV 667
D L+S L + +P RP++ ++
Sbjct: 228 DLRNLVSQL------FKRNPRDRPSVNSI 250
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 1e-11
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 32/226 (14%)
Query: 451 EIKALTEIRHRNIVKFYGFCSHPRHSFLVYECL--------ERGSLAEILSND-GSIKEF 501
E + L++++H NIV + R S+ + L E G L L G +
Sbjct: 49 EAQLLSQLKHPNIVAY-------RESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPE 101
Query: 502 SWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561
+ +V V +A AL Y+H I+HRD+ ++NV L+ +V D GIA+ L+
Sbjct: 102 NQVVEWFV--QIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156
Query: 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN 621
+ GT Y++PEL K DV++ G E+ KH + ++ +MN
Sbjct: 157 DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKH--------AFNAKDMN 208
Query: 622 LSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTV 667
+ I++ +LP ++ +L ++ +L + PE RP+++++
Sbjct: 209 SLVYRIIEGKLPPMPKDYSPELGELIA-TMLS--KRPEKRPSVKSI 251
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 65.1 bits (158), Expect = 2e-11
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Query: 451 EIKALTEIRHRNIVKFYG-FCSHPRHSFLVY-ECLERGSLAEILSNDGSIKEFSWIVRTN 508
EI+ L ++H IV++YG + ++ E + GS+ + L G++ E V
Sbjct: 54 EIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTE---SVTRK 110
Query: 509 VIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP---GSSNWT 565
+ + +SY+H + IVHRDI N+L S ++ DFG +K L+ +
Sbjct: 111 YTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIR 167
Query: 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
GT +++PE+ K DV+S G +E++ K P
Sbjct: 168 SVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPP 208
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 65.0 bits (159), Expect = 2e-11
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 16/177 (9%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEI---KALTEIRHRNIVK 465
IG G +VY+ +L +G VA+KK + LSE + L EI K L H NIV+
Sbjct: 7 IGEGAYGTVYKARDLNTGRFVALKKVR-VPLSEEGIPLSTLREIALLKQLESFEHPNIVR 65
Query: 466 FYGFCSHPRHS-----FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM 520
C PR LV+E +++ LA LS ++ ++++ + + ++
Sbjct: 66 LLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIK-DLMRQLLRGVDFL 123
Query: 521 HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE 577
H IVHRD+ +N+L++S+ + +++DFG+A+ + T T Y APE
Sbjct: 124 HSHR---IVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMA-LTSVVVTLWYRAPE 176
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 64.9 bits (159), Expect = 2e-11
Identities = 54/201 (26%), Positives = 98/201 (48%), Gaps = 31/201 (15%)
Query: 418 VYRG-ELPSGEVVAVK--KFHSLLLSEISVQRE-F----LNEIKALTEIRHRNIV--KFY 467
VYR + +GE+VA+K K ++E F L EI L +++H NIV K
Sbjct: 21 VYRARDKKTGEIVALKKLKMEK--------EKEGFPITSLREINILLKLQHPNIVTVKEV 72
Query: 468 GFCSHPRHSFLVYECLERG--SLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF 525
S+ ++V E +E SL E + E V+ ++ + + ++++H +
Sbjct: 73 VVGSNLDKIYMVMEYVEHDLKSLMETMKQPFLQSE----VKC-LMLQLLSGVAHLHDNW- 126
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIA-KFLKPGSSNWTEFAGTFGYVAPELAY-TMK 583
I+HRD+ + N+LL++ ++ DFG+A ++ P +T+ T Y APEL +
Sbjct: 127 --ILHRDLKTSNLLLNNRGILKICDFGLAREYGSP-LKPYTQLVVTLWYRAPELLLGAKE 183
Query: 584 VTEKCDVYSFGVLALEVIKGK 604
+ D++S G + E++ K
Sbjct: 184 YSTAIDMWSVGCIFAELLTKK 204
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 64.2 bits (156), Expect = 3e-11
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 15/213 (7%)
Query: 455 LTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA 514
L +++H NIV F H ++V E + G L + + K F +
Sbjct: 52 LAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKI-KLQRGKLFPEDTILQWFVQMC 110
Query: 515 NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYV 574
+ ++H ++HRDI SKN+ L+ + ++ DFG A+ L + + GT YV
Sbjct: 111 LGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYYV 167
Query: 575 APELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634
PE+ M K D++S G + E+ KHP ++S NL L PL
Sbjct: 168 PPEIWENMPYNNKSDIWSLGCILYELCTLKHP-------FQANSWKNLILKVCQGSYKPL 220
Query: 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTV 667
PS + I ++ + +P SRP+ T+
Sbjct: 221 PSHYSYELRSLIKQM----FKRNPRSRPSATTI 249
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 65.1 bits (158), Expect = 3e-11
Identities = 47/153 (30%), Positives = 82/153 (53%), Gaps = 14/153 (9%)
Query: 513 VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGTF 571
++ AL+Y+H I++RD+ NVLL SE +++D+G+ K L+PG + + F GT
Sbjct: 105 ISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT-STFCGTP 160
Query: 572 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLS---LNEIL 628
Y+APE+ D ++ GVL E++ G+ P D + SS + + N IL
Sbjct: 161 NYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVG--SSDNPDQNTEDYLFQVIL 218
Query: 629 DPRLPLPSRNIQDKLISILEVALLCLEESPESR 661
+ ++ +P R++ K S+L+ L + P+ R
Sbjct: 219 EKQIRIP-RSLSVKAASVLKSF---LNKDPKER 247
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 4e-11
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
NF + IG G VY+ +GEVVA+KK +E V + EI L E+ H
Sbjct: 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 59
Query: 462 NIVKFYGFCSHPRHSFLVYECLERG--SLAEILSNDGSIKEFSWIVRTNVIKS----VAN 515
NIVK +LV+E L + + G + +IKS +
Sbjct: 60 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSG--------IPLPLIKSYLFQLLQ 111
Query: 516 ALSYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYV 574
L++ H H ++HRD+ +N+L+++E +++DFG+A+ +T T Y
Sbjct: 112 GLAFCHSHR----VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYR 167
Query: 575 APELAYTMKV-TEKCDVYSFGVLALEVI 601
APE+ K + D++S G + E++
Sbjct: 168 APEILLGCKYYSTAVDIWSLGCIFAEMV 195
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 64.2 bits (156), Expect = 4e-11
Identities = 46/183 (25%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 428 VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGS 487
+VAVK + + + + +FL EIK ++ +++ NI++ G C ++ E +E G
Sbjct: 46 LVAVKMLRADVTK--TARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGD 103
Query: 488 LAEILSNDGSIKEFS------WIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS 541
L + LS F+ + N++ S M + VHRD++++N L+
Sbjct: 104 LNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVG 163
Query: 542 SEYEARVSDFGIAKFLKPGSSNWTEFAG----TFGYVAPELAYTMKVTEKCDVYSFGVLA 597
+ Y +++DFG+++ L S ++ G ++A E K T DV++FGV
Sbjct: 164 NHYTIKIADFGMSRNLY--SGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTL 221
Query: 598 LEV 600
E+
Sbjct: 222 WEM 224
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 4e-11
Identities = 69/273 (25%), Positives = 121/273 (44%), Gaps = 45/273 (16%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
+G G SVY+ P+G +A+K+ L L E S + + E+ L + IV FYG
Sbjct: 9 LGKGNYGSVYKVLHRPTGVTMAMKEIR-LELDE-SKFNQIIMELDILHKAVSPYIVDFYG 66
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANA----LSYMHHDC 524
++ E ++ GSL ++ + + + + +V++ + A L ++ +
Sbjct: 67 AFFIEGAVYMCMEYMDAGSLDKLYAGGVATE----GIPEDVLRRITYAVVKGLKFLKEE- 121
Query: 525 FPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE------- 577
I+HRD+ NVL++ + ++ DFG++ L + G Y+APE
Sbjct: 122 -HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTN--IGCQSYMAPERIKSGGP 178
Query: 578 ---LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD---PR 631
YT+ + DV+S G+ LE+ G++P + +N+ L+ I+D P
Sbjct: 179 NQNPTYTV----QSDVWSLGLSILEMALGRYPYP-----PETYANIFAQLSAIVDGDPPT 229
Query: 632 LPLP-SRNIQDKLISILEVALLCLEESPESRPT 663
LP S + QD CL + P RPT
Sbjct: 230 LPSGYSDDAQD-------FVAKCLNKIPNRRPT 255
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 64.2 bits (156), Expect = 4e-11
Identities = 70/279 (25%), Positives = 125/279 (44%), Gaps = 38/279 (13%)
Query: 397 IIRATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEIS--VQREFLNEIK 453
I++ T+ F + +G G +VY+G +P GE V + L S +E L+E
Sbjct: 3 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 61
Query: 454 ALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEIL----SNDGSIKEFSWIVRTNV 509
+ + + ++ + G C L+ + + G L + + N GS +W V+
Sbjct: 62 VMASVDNPHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQ--- 117
Query: 510 IKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAG 569
+A ++Y+ +VHRD++++NVL+ + +++DFG+AK L + G
Sbjct: 118 ---IAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGG 171
Query: 570 T--FGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNE 626
++A E T + DV+S+GV E++ G P D I +S S++ L E
Sbjct: 172 KVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSI-LEKGE 228
Query: 627 ILDPRLPLPSRNIQDKLISILEVALL---CLEESPESRP 662
RLP P I ++V ++ C +SRP
Sbjct: 229 ----RLPQPP-------ICTIDVYMIMVKCWMIDADSRP 256
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 5e-11
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 48/279 (17%)
Query: 410 IGIGGQASVYR------GELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNI 463
+G G VY+ G L + +V+ K L +++ EI+ L H I
Sbjct: 20 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL--------EDYMVEIEILATCNHPYI 71
Query: 464 VKFYGFCSHPRHSFLVYECLERGSL-AEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH 522
VK G +++ E G++ A +L D + E V + + + AL Y+H
Sbjct: 72 VKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV---ICRQMLEALQYLHS 128
Query: 523 DCFPPIVHRDISSKNVLLSSEYEARVSDFGI-AKFLKPGSSNWTEFAGTFGYVAPELAY- 580
I+HRD+ + NVLL+ + + +++DFG+ AK +K F GT ++APE+
Sbjct: 129 M---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRR-DSFIGTPYWMAPEVVMC 184
Query: 581 -TMKVTE---KCDVYSFGVLALEVIKGKHPRDFIS----LLSSSSSNMNLSLNEILDPRL 632
TMK T K D++S G+ +E+ + + P ++ LL + S P L
Sbjct: 185 ETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSE---------PPTL 235
Query: 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
PS+ + L+ A L++ PE+RP + QLL
Sbjct: 236 SQPSKWSME-FRDFLKTA---LDKHPETRP---SAAQLL 267
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|227223 COG4886, COG4886, Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Score = 64.2 bits (156), Expect = 6e-11
Identities = 69/214 (32%), Positives = 96/214 (44%), Gaps = 29/214 (13%)
Query: 121 MNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKS-LNYLVLNGNKLSGNLPRV 179
N S E+ +L L LD N I +IP +G LKS L L L+ NK+ +LP
Sbjct: 101 NLNRLRSNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSP 158
Query: 180 LGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDL 239
L +L L+ LDLS N LS +P+ L NL ++ L+LS N+ P E+E L L ELDL
Sbjct: 159 LRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKISD-LPPEIELLSALEELDL 216
Query: 240 S----------------------HNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFE 277
S N ++P I NL +LE L++S+N +S S
Sbjct: 217 SNNSIIELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQIS--SISSLG 274
Query: 278 GMHGLSCIDISYNELLGLIPNSTGFQYDPIQALR 311
+ L +D+S N L +P L
Sbjct: 275 SLTNLRELDLSGNSLSNALPLIALLLLLLELLLN 308
|
Length = 394 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 62.9 bits (153), Expect = 8e-11
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 14/147 (9%)
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH 521
+ K Y + +LV E L G A ++ G + E W I V + +H
Sbjct: 58 YVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPE-DWA--KQYIAEVVLGVEDLH 114
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK--FLKPGSSNWTEFAGTFGYVAPELA 579
I+HRDI +N+L+ +++DFG+++ +F GT Y+APE
Sbjct: 115 QR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENK------KFVGTPDYLAPETI 165
Query: 580 YTMKVTEKCDVYSFGVLALEVIKGKHP 606
+ + D +S G + E + G P
Sbjct: 166 LGVGDDKMSDWWSLGCVIFEFLFGYPP 192
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 63.4 bits (154), Expect = 8e-11
Identities = 41/132 (31%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Query: 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDIS 534
H F V E L G L + + G F T + L ++H I++RD+
Sbjct: 70 HLFFVMEFLNGGDLMFHIQDKG---RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLK 123
Query: 535 SKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFG 594
NV+L + +++DFG+ K G + + F GT Y+APE+ +K T D +SFG
Sbjct: 124 LDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFG 183
Query: 595 VLALEVIKGKHP 606
VL E++ G+ P
Sbjct: 184 VLLYEMLIGQSP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 9e-11
Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 31/262 (11%)
Query: 415 QASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFC---- 470
Q S+Y+G + + V ++ F + NEIK L I NI+K YGF
Sbjct: 33 QNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV 91
Query: 471 -SHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIV 529
PR S L+ E RG L E+L + K+ S+ + ++ L ++ P
Sbjct: 92 DDLPRLS-LILEYCTRGYLREVLDKE---KDLSFKTKLDMAIDCCKGLYNLYKYTNKP-- 145
Query: 530 HRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTM--KVTEK 587
+++++S + L++ Y+ ++ G+ K L F Y + ++ + + T K
Sbjct: 146 YKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNF---MVYFSYKMLNDIFSEYTIK 202
Query: 588 CDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN--EILDPRLPLPSRNIQDKLIS 645
D+YS GV+ E+ GK P F +L + ++ ++ N L PL + I +
Sbjct: 203 DDIYSLGVVLWEIFTGKIP--FENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEA--- 257
Query: 646 ILEVALLCLEESPESRPTMQTV 667
C RP ++ +
Sbjct: 258 -------CTSHDSIKRPNIKEI 272
|
Length = 283 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 64.5 bits (157), Expect = 1e-10
Identities = 35/99 (35%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 45 LEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEI 104
L +DN L G IP + L L ++L N + GNI G +L LD+S+N+F G I
Sbjct: 423 LGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSI 482
Query: 105 WSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDF 143
S G+ L LN + N+++G +P +G LH+ F
Sbjct: 483 PESLGQLTSLRILNLNGNSLSGRVPAALGGR-LLHRASF 520
|
Length = 623 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 63.3 bits (154), Expect = 1e-10
Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 8/140 (5%)
Query: 469 FCSH--PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFP 526
FC+ H F V E L G L + + S F + L ++H
Sbjct: 62 FCTFQTKEHLFFVMEYLNGGDL---MFHIQSSGRFDEARARFYAAEIICGLQFLHKK--- 115
Query: 527 PIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTE 586
I++RD+ NVLL + +++DFG+ K G + F GT Y+APE+ K E
Sbjct: 116 GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNE 175
Query: 587 KCDVYSFGVLALEVIKGKHP 606
D +SFGVL E++ G+ P
Sbjct: 176 SVDWWSFGVLLYEMLIGQSP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 62.4 bits (151), Expect = 1e-10
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 11/161 (6%)
Query: 451 EIKALTEIRHRNIVKFYGFCSHPRHSFL--VYECLERGSLAEILSNDGSIKEFSWIVRTN 508
EI+ L + H IV++YG P L E + GS+ + L + G++ E V
Sbjct: 54 EIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTEN---VTRK 110
Query: 509 VIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP---GSSNWT 565
+ + +SY+H + IVHRDI N+L S ++ DFG +K L+ +
Sbjct: 111 YTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMK 167
Query: 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
GT +++PE+ K D++S G +E++ K P
Sbjct: 168 SVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPP 208
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 63.0 bits (153), Expect = 1e-10
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 19/202 (9%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
+G G SV + +GE VA+KK SEI +R + E+ L ++H N++
Sbjct: 23 VGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAY-RELTLLKHMQHENVIGLLD 81
Query: 469 -FCSHPR----HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHD 523
F S F + + L +I+ + S + ++V + L Y+H
Sbjct: 82 VFTSAVSGDEFQDFYLVMPYMQTDLQKIMGHPLSEDKVQYLVY-----QMLCGLKYIHS- 135
Query: 524 CFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT-M 582
I+HRD+ N+ ++ + E ++ DFG+A+ + T + T Y APE+ M
Sbjct: 136 --AGIIHRDLKPGNLAVNEDCELKILDFGLARH---ADAEMTGYVVTRWYRAPEVILNWM 190
Query: 583 KVTEKCDVYSFGVLALEVIKGK 604
+ D++S G + E++ GK
Sbjct: 191 HYNQTVDIWSVGCIMAEMLTGK 212
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 62.8 bits (153), Expect = 2e-10
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 14/208 (6%)
Query: 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
K+F +G GG V+ + +GE+VA+K+ LL +++ R L E LT +
Sbjct: 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKS 60
Query: 461 RNIVK-FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSY 519
+VK Y F + +L E + G +L+N G + E R + + A+
Sbjct: 61 EWLVKLLYAF-QDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDH--ARFYMAEMFE-AVDA 116
Query: 520 MHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGTFGYVAPEL 578
+H +HRD+ +N L+ + +++DFG++K + +S G+ Y+APE+
Sbjct: 117 LHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANS----VVGSPDYMAPEV 169
Query: 579 AYTMKVTEKCDVYSFGVLALEVIKGKHP 606
D +S G + E + G P
Sbjct: 170 LRGKGYDFTVDYWSLGCMLYEFLCGFPP 197
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Score = 62.3 bits (151), Expect = 2e-10
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 50/248 (20%)
Query: 445 QREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKE--- 500
R+F E++ L ++ H NI+ G C H + +L E G+L + L ++
Sbjct: 51 HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA 110
Query: 501 FSWIVRTNVIKS----------VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSD 550
F+ T S VA + Y+ F +HRD++++N+L+ Y A+++D
Sbjct: 111 FAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIAD 167
Query: 551 FGIAKFLKPGSSNWTEFAGTFG-----YVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGK 604
FG+++ G + + T G ++A E L Y++ T DV+S+GVL E+
Sbjct: 168 FGLSR----GQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNS-DVWSYGVLLWEI---- 216
Query: 605 HPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR-----NIQDKLISILEVALLCLEESPE 659
+SL + M + E+ + +LP R N D++ ++ C E P
Sbjct: 217 -----VSLGGTPYCGMTCA--ELYE-KLPQGYRLEKPLNCDDEVYDLMR---QCWREKPY 265
Query: 660 SRPTMQTV 667
RP+ +
Sbjct: 266 ERPSFAQI 273
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 61.8 bits (150), Expect = 2e-10
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 449 LNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTN 508
NE + L + H NI+++Y + +V E G+LAE + + S +
Sbjct: 47 QNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCN----SLLDEDT 102
Query: 509 VIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE-ARVSDFGIAKFLKPGSSNWTEF 567
++ L +HH I+HRD+ ++N+LL ++ DFGI+K L S +T
Sbjct: 103 ILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYT-V 161
Query: 568 AGTFGYVAPELAYTMKVTEKCDVYSFGVLALEV 600
GT Y++PEL +K D+++ G + E+
Sbjct: 162 VGTPCYISPELCEGKPYNQKSDIWALGCVLYEL 194
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 62.5 bits (153), Expect = 2e-10
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 30/212 (14%)
Query: 410 IGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG G V +G VA+KK ++ I +R L EIK L +RH NI+
Sbjct: 8 IGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKR-ILREIKLLRHLRHENIIGLLD 66
Query: 469 FCSHP-RHSF----LVYECLERGSLAEILSNDG--SIKEFSWIVRTNVIKSVANALSYMH 521
P F +V E +E L +++ + + + + +++ L Y+H
Sbjct: 67 ILRPPSPEDFNDVYIVTELME-TDLHKVIKSPQPLTDDHIQYFL-YQILR----GLKYLH 120
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP---GSSNWTEFAGTFGYVAPEL 578
++HRD+ N+L++S + ++ DFG+A+ + P TE+ T Y APEL
Sbjct: 121 ---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPEL 177
Query: 579 -----AYTMKVTEKCDVYSFGVLALEVIKGKH 605
YT + D++S G + E++ K
Sbjct: 178 LLSSSRYTKAI----DIWSVGCIFAELLTRKP 205
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 2e-10
Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 26/250 (10%)
Query: 429 VAVKKFHSLLLSEISVQREFL-NEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLERG 486
VAVK + S +RE L +E+K ++ + H NIV G C+ ++ E G
Sbjct: 68 VAVKMLKP---TAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYG 124
Query: 487 SLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE 545
L L S ++ + VA ++++ +HRD++++NVLL+
Sbjct: 125 DLLNFLRRKRESFLTLEDLL--SFSYQVAKGMAFL---ASKNCIHRDLAARNVLLTHGKI 179
Query: 546 ARVSDFGIAKFLKPGSSNWTEFAGTF---GYVAPELAYTMKVTEKCDVYSFGVLALEVIK 602
++ DFG+A+ + SN+ ++APE + T + DV+S+G+L E+
Sbjct: 180 VKICDFGLARDIM-NDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFS 238
Query: 603 -GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESR 661
G +P + + S + + P I D + + C + P R
Sbjct: 239 LGSNPYPGM-PVDSKFYKLIKEGYRMAQPE--HAPAEIYDIMKT-------CWDADPLKR 288
Query: 662 PTMQTVCQLL 671
PT + + QL+
Sbjct: 289 PTFKQIVQLI 298
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 4e-10
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 11/161 (6%)
Query: 451 EIKALTEIRHRNIVKFYGFCSHPRHSFL--VYECLERGSLAEILSNDGSIKEFSWIVRTN 508
EI+ L +RH IV++YG P L E + GS+ + L G++ E V
Sbjct: 54 EIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTE---NVTRR 110
Query: 509 VIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP---GSSNWT 565
+ + +SY+H + IVHRDI N+L S ++ DFG +K ++ +
Sbjct: 111 YTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIK 167
Query: 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
GT +++PE+ K DV+S +E++ K P
Sbjct: 168 SVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPP 208
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 4e-10
Identities = 60/201 (29%), Positives = 87/201 (43%), Gaps = 12/201 (5%)
Query: 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF-Y 467
+G GG V ++ +G++ A KK L + ++ LNE K L ++ R IV Y
Sbjct: 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAY 60
Query: 468 GFCSHPRHSFLVYECLERGSLAEILSNDGS--IKEFSWIVRTNVIKSVANALSYMHHDCF 525
F + LV + G L + N G E I I L ++H
Sbjct: 61 AFET-KDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQI---ICGLEHLHQR-- 114
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVT 585
IV+RD+ +NVLL R+SD G+A LK G AGT GY+APE+
Sbjct: 115 -RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKI-KGRAGTPGYMAPEVLQGEVYD 172
Query: 586 EKCDVYSFGVLALEVIKGKHP 606
D ++ G E+I G+ P
Sbjct: 173 FSVDWFALGCTLYEMIAGRSP 193
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 61.4 bits (149), Expect = 4e-10
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 425 SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS-FLVYECL 483
+G+ VA+KK + + +R + E+K L +RH NI+ P + V E L
Sbjct: 34 TGQNVAIKKIMKPFSTPVLAKRTY-RELKLLKHLRHENIISLSDIFISPLEDIYFVTE-L 91
Query: 484 ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543
L +L++ K+F +++ L Y+H +VHRD+ N+L++
Sbjct: 92 LGTDLHRLLTSRPLEKQFIQYFLYQILR----GLKYVHS---AGVVHRDLKPSNILINEN 144
Query: 544 YEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIK 602
+ ++ DFG+A + T + T Y APE+ T K + D++S G + E+++
Sbjct: 145 CDLKICDFGLA---RIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLE 201
Query: 603 GK 604
GK
Sbjct: 202 GK 203
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 5e-10
Identities = 64/265 (24%), Positives = 114/265 (43%), Gaps = 35/265 (13%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEIS--VQREFLNEIKALTEIRHRNIVKF 466
+G G +VY+G +P GE V + +L S +E L+E + + + +
Sbjct: 15 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRL 74
Query: 467 YGFCSHPRHSFLVYECLERGSLAEILSND----GSIKEFSWIVRTNVIKSVANALSYMHH 522
G C LV + + G L + + + GS +W V+ +A +SY+
Sbjct: 75 LGICLTSTVQ-LVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQ------IAKGMSYLEE 127
Query: 523 DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT--FGYVAPELAY 580
+VHRD++++NVL+ S +++DFG+A+ L + + G ++A E
Sbjct: 128 ---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL 184
Query: 581 TMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP--RLPLPSR 637
+ T + DV+S+GV E++ G P D I + ++L+ RLP P
Sbjct: 185 HRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA---------REIPDLLEKGERLPQPPI 235
Query: 638 NIQDKLISILEVALLCLEESPESRP 662
D + + + C E RP
Sbjct: 236 CTID----VYMIMVKCWMIDSECRP 256
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 60.2 bits (146), Expect = 6e-10
Identities = 30/79 (37%), Positives = 46/79 (58%)
Query: 528 IVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEK 587
I++RD+ +NVLL ++ R+SD G+A LK G S +AGT G++APEL +
Sbjct: 118 IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFS 177
Query: 588 CDVYSFGVLALEVIKGKHP 606
D ++ GV E+I + P
Sbjct: 178 VDYFALGVTLYEMIAARGP 196
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 9e-10
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 16/226 (7%)
Query: 392 IVYEEIIRATKNFDAEQCIGIGGQASVYR-GELPSGEVVAVKKFHSLLLSEISVQREFLN 450
I+++ + ++ + IG G V++ +G AVK + + ++ E+ N
Sbjct: 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEY-N 66
Query: 451 EIKALTEIRHRNIVKFYGF-----CSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIV 505
+KAL++ H N+VKFYG + +LV E GS+ +++ G +K +
Sbjct: 67 ILKALSD--HPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVK--GFLKRGERME 122
Query: 506 RTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565
+ + AL + H +HRD+ N+LL++E ++ DFG++ L
Sbjct: 123 EPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRN 182
Query: 566 EFAGTFGYVAPEL-----AYTMKVTEKCDVYSFGVLALEVIKGKHP 606
GT ++APE+ +CDV+S G+ A+E+ G P
Sbjct: 183 TSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPP 228
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 59.4 bits (144), Expect = 1e-09
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 26/192 (13%)
Query: 450 NEIKALTEIRHRNIVKF-YGFCSHPRHSFLVYECLERGSL-----AEILSNDGSIKEFSW 503
E L E+ H IVK Y F + + +L+ + L G L E++ + +K +
Sbjct: 47 MERDILAEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRLSKEVMFTEEDVKFY-- 103
Query: 504 IVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN 563
+ +A AL ++H I++RD+ +N+LL E +++DFG++K
Sbjct: 104 ------LAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 154
Query: 564 WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLS 623
F GT Y+APE+ T+ D +SFGVL E++ G P + +
Sbjct: 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLP--------FQGKDRKET 206
Query: 624 LNEILDPRLPLP 635
+ IL +L +P
Sbjct: 207 MTMILKAKLGMP 218
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 2e-09
Identities = 39/162 (24%), Positives = 77/162 (47%), Gaps = 28/162 (17%)
Query: 459 RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEIL----------SNDG---SIKEFSWIV 505
+H+NI+ G C+ +++ E +G+L E L + D ++ S+
Sbjct: 76 KHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKD 135
Query: 506 RTNVIKSVANALSYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK------FLK 558
+ VA + Y+ C +HRD++++NVL++ + +++DFG+A+ + K
Sbjct: 136 LVSCAYQVARGMEYLESRRC----IHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYK 191
Query: 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEV 600
S+ ++APE + T + DV+SFG+L E+
Sbjct: 192 KTSNGRLPVK----WMAPEALFDRVYTHQSDVWSFGILMWEI 229
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 59.6 bits (144), Expect = 2e-09
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDIS 534
+ F V E L G L + + S +F T + L ++H IV+RD+
Sbjct: 70 NLFFVMEYLNGGDL---MFHIQSCHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLK 123
Query: 535 SKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFG 594
N+LL ++ +++DFG+ K G + F GT Y+APE+ K D +SFG
Sbjct: 124 LDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFG 183
Query: 595 VLALEVIKGKHP 606
VL E++ G+ P
Sbjct: 184 VLLYEMLIGQSP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 59.1 bits (143), Expect = 2e-09
Identities = 41/135 (30%), Positives = 75/135 (55%), Gaps = 7/135 (5%)
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGTFGYV 574
AL+++H I++RD+ NVLL +E +++D+G+ K ++PG + T F GT Y+
Sbjct: 108 ALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTST-FCGTPNYI 163
Query: 575 APELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNE-ILDPRLP 633
APE+ D ++ GVL E++ G+ P D + + + N L + IL+ ++
Sbjct: 164 APEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR 223
Query: 634 LPSRNIQDKLISILE 648
+P R++ K S+L+
Sbjct: 224 IP-RSLSVKASSVLK 237
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 59.1 bits (144), Expect = 2e-09
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 49/228 (21%)
Query: 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR- 459
+ ++ Q +G G V++ + + EVVA+KK + QR F EI L E+
Sbjct: 7 RKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTF-REIMFLQELGD 65
Query: 460 HRNIVKFYGFCSHP----RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSV-- 513
H NIVK + +LV+E +E L ++R N+++ V
Sbjct: 66 HPNIVKLLNV--IKAENDKDIYLVFEYMETD-----LHA---------VIRANILEDVHK 109
Query: 514 -------ANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW-- 564
AL Y+H ++HRD+ N+LL+S+ +++DFG+A+ L N
Sbjct: 110 RYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPEN 166
Query: 565 ---TEFAGTFGYVAPEL-----AYTMKVTEKCDVYSFGVLALEVIKGK 604
T++ T Y APE+ YT V D++S G + E++ GK
Sbjct: 167 PVLTDYVATRWYRAPEILLGSTRYTKGV----DMWSVGCILGEMLLGK 210
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 2e-09
Identities = 51/212 (24%), Positives = 104/212 (49%), Gaps = 24/212 (11%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
NF + +G G A+VY+G +GE+VA+K+ H L +E + EI + E++H
Sbjct: 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIH--LDAEEGTPSTAIREISLMKELKHE 58
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDG--------SIKEFSWIVRTNVIKSV 513
NIV+ + LV+E ++ L + + G ++K F++ +
Sbjct: 59 NIVRLHDVIHTENKLMLVFEYMD-KDLKKYMDTHGVRGALDPNTVKSFTY--------QL 109
Query: 514 ANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGY 573
+++ H + ++HRD+ +N+L++ E +++DFG+A+ + ++ T Y
Sbjct: 110 LKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVVTLWY 166
Query: 574 VAPELAYTMKV-TEKCDVYSFGVLALEVIKGK 604
AP++ + + D++S G + E+I G+
Sbjct: 167 RAPDVLLGSRTYSTSIDIWSVGCIMAEMITGR 198
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 58.4 bits (141), Expect = 2e-09
Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 425 SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF-YGFCSHPRHSFLVYECL 483
+G++ A KK L + S ++ L E + L ++ IV Y F S H LV +
Sbjct: 17 TGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKT-HLCLVMSLM 75
Query: 484 ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543
G L + N G + VI A + H IV+RD+ +NVLL +
Sbjct: 76 NGGDLKYHIYNVGERG----LEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQ 131
Query: 544 YEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG 603
R+SD G+A LK G + T+ AGT GY+APE+ + D ++ G E++ G
Sbjct: 132 GNCRLSDLGLAVELKDGKTI-TQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAG 190
Query: 604 KHP-RDF 609
+ P +D
Sbjct: 191 RTPFKDH 197
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 58.8 bits (142), Expect = 3e-09
Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 34/209 (16%)
Query: 422 ELPSGEV-VAVKKFHSLLLS--------EISVQREFLNEIKALTEIRHRNIVKFYGFCSH 472
+LP+ + V+K LL++ + + +FL E+K L+ ++ NI++ G C
Sbjct: 31 DLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVD 90
Query: 473 PRHSFLVYECLERGSLAEILSN----------------DGSIKEFSWIVRTNVIKSVANA 516
++ E +E G L + LS+ + S+ +V +A+
Sbjct: 91 EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASG 150
Query: 517 LSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAG----TFG 572
+ Y+ F VHRD++++N L+ +++DFG+++ L G ++ G
Sbjct: 151 MKYLSSLNF---VHRDLATRNCLVGENLTIKIADFGMSRNLYAG--DYYRIQGRAVLPIR 205
Query: 573 YVAPELAYTMKVTEKCDVYSFGVLALEVI 601
++A E K T DV++FGV E++
Sbjct: 206 WMAWECILMGKFTTASDVWAFGVTLWEIL 234
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 3e-09
Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 27/170 (15%)
Query: 425 SGEVVAVKKFHSLLLSEISVQREF----LNEIKALTEIRHRNIVKFYGFCSHP------- 473
+ ++VA+KK L+ +E + F L EIK L ++H N+V C
Sbjct: 36 TKQIVALKKV--LMENE---KEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90
Query: 474 RHSF-LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRD 532
+ SF LV+E E LA +LSN ++K F+ V+K + N L Y+H I+HRD
Sbjct: 91 KGSFYLVFEFCEH-DLAGLLSNK-NVK-FTLSEIKKVMKMLLNGLYYIH---RNKILHRD 144
Query: 533 ISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAG---TFGYVAPEL 578
+ + N+L++ + +++DFG+A+ F +S + T Y PEL
Sbjct: 145 MKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPEL 194
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 58.2 bits (141), Expect = 3e-09
Identities = 59/279 (21%), Positives = 112/279 (40%), Gaps = 69/279 (24%)
Query: 428 VVAVKKFHSLLLSEISVQRE---FLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECL 483
VAVK L + + +++ ++E++ + I +H+NI+ G C+ ++V E
Sbjct: 44 TVAVKM-----LKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYA 98
Query: 484 ERGSLAEILSNDGSIKEFSWIVRTNVIK-------------SVANALSYMHHDCFPPIVH 530
G+L + L E++ + VA + ++ +H
Sbjct: 99 AHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIH 155
Query: 531 RDISSKNVLLSSEYEARVSDFGIAK-------FLKPGSS----NWTEFAGTFGYVAPELA 579
RD++++NVL++ ++ +++DFG+A+ + K + W +APE
Sbjct: 156 RDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKW---------MAPEAL 206
Query: 580 YTMKVTEKCDVYSFGVLALEVIK-GKHP------RDFISLLSSSSSNMNLSLNEILDPRL 632
+ T + DV+SFGVL E+ G P + LL R+
Sbjct: 207 FDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGY-------------RM 253
Query: 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
P N +L ++ C E P RPT + + + L
Sbjct: 254 EKPQ-NCTQELYHLM---RDCWHEVPSQRPTFKQLVEDL 288
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 4e-09
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 29/214 (13%)
Query: 404 FDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN 462
++ + IG G VY+ + + E +A+KK L + V + EI L E++H N
Sbjct: 4 YEKVEKIGEGTYGVVYKARDRVTNETIALKKIR-LEQEDEGVPSTAIREISLLKEMQHGN 62
Query: 463 IVKFYGFCSHPRHSFLVYECLE------RGSLAEILSNDGSIKEFSWIVRTNVIKSVANA 516
IV+ + +LV+E L+ S + N IK + + +
Sbjct: 63 IVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLY--------QILRG 114
Query: 517 LSYMHHDCFPPIVHRDISSKNVLLSSEYEA-RVSDFGIAKFLKPGSSNWTEFAGTFGYVA 575
++Y H ++HRD+ +N+L+ A +++DFG+A+ +T T Y A
Sbjct: 115 IAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRA 171
Query: 576 PEL-----AYTMKVTEKCDVYSFGVLALEVIKGK 604
PE+ Y+ V D++S G + E++ K
Sbjct: 172 PEILLGSRHYSTPV----DIWSVGCIFAEMVNQK 201
|
Length = 294 |
| >gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 5e-09
Identities = 51/229 (22%), Positives = 105/229 (45%), Gaps = 28/229 (12%)
Query: 447 EFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVR 506
EFLNE + E ++V+ G S + + ++ E + RG L L + E + +
Sbjct: 55 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQA 114
Query: 507 TNVIK-------SVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559
+K +A+ ++Y++ + F VHRD++++N +++ ++ ++ DFG+ + +
Sbjct: 115 PPSLKKMIQMAGEIADGMAYLNANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIY- 170
Query: 560 GSSNWTEFAGT----FGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLS 614
+++ G +++PE T DV+SFGV+ E+ + P
Sbjct: 171 -ETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP-------Y 222
Query: 615 SSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPT 663
SN + L +++ L N D L E+ +C + +P+ RP+
Sbjct: 223 QGMSNEQV-LRFVMEGGLLDKPDNCPDML---FELMRMCWQYNPKMRPS 267
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 5e-09
Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGTFGYV 574
AL+++H I++RD+ NVLL ++ +++D+G+ K L PG + T F GT Y+
Sbjct: 108 ALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTST-FCGTPNYI 163
Query: 575 APELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIS 611
APE+ + D ++ GVL E++ G+ P D I+
Sbjct: 164 APEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIIT 200
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 57.7 bits (139), Expect = 5e-09
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 22/207 (10%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSE---ISVQREFLNEIKALTEIRHRNIVK 465
IG+G +VY+ + SG VA+K + +S RE + +K L H NIV+
Sbjct: 8 IGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVRE-VALLKRLEAFDHPNIVR 66
Query: 466 FYGFCSHPRHS-----FLVYECLE---RGSLAEILSNDGSIKEFSWIVRTNVIKSVANAL 517
C+ R LV+E ++ R L ++ + ++++ L
Sbjct: 67 LMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIK-----DLMRQFLRGL 121
Query: 518 SYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE 577
++H +C IVHRD+ +N+L++S + +++DFG+A+ + T T Y APE
Sbjct: 122 DFLHANC---IVHRDLKPENILVTSGGQVKLADFGLARIYSCQMA-LTPVVVTLWYRAPE 177
Query: 578 LAYTMKVTEKCDVYSFGVLALEVIKGK 604
+ D++S G + E+ + K
Sbjct: 178 VLLQSTYATPVDMWSVGCIFAEMFRRK 204
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 6e-09
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 24/212 (11%)
Query: 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
K + + IG G Q V + G VAVKK ++ +R + E+ L + H
Sbjct: 21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY-RELVLLKCVNH 79
Query: 461 RNIVKFYGFCSHPRHS-------FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSV 513
+NI+ + P+ S +LV E ++ +L +++ + + S++ + +
Sbjct: 80 KNIISLLNVFT-PQKSLEEFQDVYLVMELMD-ANLCQVIHMELDHERMSYL-----LYQM 132
Query: 514 ANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW--TEFAGTF 571
+ ++H I+HRD+ N+++ S+ ++ DFG+A + +N+ T + T
Sbjct: 133 LCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLA---RTACTNFMMTPYVVTR 186
Query: 572 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKG 603
Y APE+ M E D++S G + E++KG
Sbjct: 187 YYRAPEVILGMGYKENVDIWSVGCIMGELVKG 218
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Score = 57.2 bits (138), Expect = 8e-09
Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 13/183 (7%)
Query: 428 VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGS 487
+VAVK + + + +FL EIK ++ ++ NI++ C ++ E +E G
Sbjct: 48 LVAVKMLRED--ANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGD 105
Query: 488 LAEILS-----NDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS 542
L + LS + I + +I S M + VHRD++++N L+
Sbjct: 106 LNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGK 165
Query: 543 EYEARVSDFGIAKFLKPGSSNWTEFAG----TFGYVAPELAYTMKVTEKCDVYSFGVLAL 598
Y +++DFG+++ L G ++ G +++ E K T DV++FGV
Sbjct: 166 NYTIKIADFGMSRNLYSG--DYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLW 223
Query: 599 EVI 601
E++
Sbjct: 224 EIL 226
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296 |
| >gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Score = 57.0 bits (137), Expect = 8e-09
Identities = 62/275 (22%), Positives = 119/275 (43%), Gaps = 44/275 (16%)
Query: 418 VYRGEL---PSGE---VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS 471
VY+G L GE VA+K +E ++ EF +E + ++H NIV G +
Sbjct: 21 VYKGHLFGTAPGEQTQAVAIKTLKDK--AEGPLREEFKHEAMMRSRLQHPNIVCLLGVVT 78
Query: 472 HPRHSFLVYECLERGSLAEIL------SNDGSIKEFSWIVRT-------NVIKSVANALS 518
+ +++ L E L S+ GS + + T +++ +A +
Sbjct: 79 KEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGME 138
Query: 519 YM--HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT----FG 572
++ HH +VH+D++++NVL+ + ++SD G+ F + ++++ + G
Sbjct: 139 FLSSHH-----VVHKDLATRNVLVFDKLNVKISDLGL--FREVYAADYYKLMGNSLLPIR 191
Query: 573 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRL 632
+++PE K + D++S+GV+ EV F L N + E++ R
Sbjct: 192 WMSPEAIMYGKFSIDSDIWSYGVVLWEV--------FSYGLQPYCGYSNQDVIEMIRNRQ 243
Query: 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTV 667
LP + D + + L C E P RP + +
Sbjct: 244 VLPCPD--DCPAWVYTLMLECWNEFPSRRPRFKDI 276
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 9e-09
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 513 VANALSYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGT 570
+ L ++H I++RD+ NVLL SE +++DFG+ K + G + T F GT
Sbjct: 105 IVLGLQFLHERG----IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTST-FCGT 159
Query: 571 FGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
Y+APE+ D ++ GVL E++ G+ P
Sbjct: 160 PDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSP 195
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 1e-08
Identities = 25/68 (36%), Positives = 35/68 (51%)
Query: 234 LSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELL 293
+ L L + L G IP I L L+ +N+S N++ G IP + L +D+SYN
Sbjct: 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFN 479
Query: 294 GLIPNSTG 301
G IP S G
Sbjct: 480 GSIPESLG 487
|
Length = 623 |
| >gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 1e-08
Identities = 73/279 (26%), Positives = 111/279 (39%), Gaps = 46/279 (16%)
Query: 408 QCIGIGGQASVYRGEL----PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNI 463
+ IG G VY G L AVK + + +++ +FL E + + H N+
Sbjct: 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNV 58
Query: 464 VKFYGFCSHPRHSFLV---YECLERGSLAEILSNDGSIKEFSWIVRTNVIK-------SV 513
+ G C S LV Y G L + ++ +K V
Sbjct: 59 LSLLGICLPSEGSPLVVLPYMK--HGDLRNFIRSET---------HNPTVKDLIGFGLQV 107
Query: 514 ANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK--FLKPGSS--NWTEFAG 569
A + Y+ F VHRD++++N +L + +V+DFG+A+ + K S N T
Sbjct: 108 AKGMEYLASKKF---VHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKL 164
Query: 570 TFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEIL 628
++A E T K T K DV+SFGVL E++ +G P + + +L
Sbjct: 165 PVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDIT--------VYLL 216
Query: 629 DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTV 667
R L D L EV L C PE RPT +
Sbjct: 217 QGRRLLQPEYCPDPL---YEVMLSCWHPKPEMRPTFSEL 252
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 1e-08
Identities = 68/298 (22%), Positives = 119/298 (39%), Gaps = 69/298 (23%)
Query: 408 QCIGIGGQASV-YRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIV-- 464
+ +G G +V + +G VA+KK + SE+ +R + E++ L ++H N++
Sbjct: 21 KQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAY-RELRLLKHMKHENVIGL 79
Query: 465 -----------KFYGFCSHPRHSFLVYECL--ERGSLA--EILSNDGSIKEFSWIVRTN- 508
+F+ F +LV + + G L E LS D R
Sbjct: 80 LDVFTPDLSLDRFHDF-------YLVMPFMGTDLGKLMKHEKLSED----------RIQF 122
Query: 509 VIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA 568
++ + L Y+H I+HRD+ N+ ++ + E ++ DFG+A + S T +
Sbjct: 123 LVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLA---RQTDSEMTGYV 176
Query: 569 GTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGK-------H--------------P 606
T Y APE+ M T+ D++S G + E++ GK H
Sbjct: 177 VTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPS 236
Query: 607 RDFISLLSSSSS-NMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPT 663
++F+ L S + N L N +++LE L+ ESR T
Sbjct: 237 KEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVL---DAESRIT 291
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 57.1 bits (138), Expect = 2e-08
Identities = 27/82 (32%), Positives = 43/82 (52%)
Query: 4 LSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNL 63
L G IP + +L+ + L NS+ G++P +G++ L L++ N G IP SL L
Sbjct: 430 LRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQL 489
Query: 64 ASLNRVHLEQNHLTGNISEVFG 85
SL ++L N L+G + G
Sbjct: 490 TSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 2e-08
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 513 VANALSYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF 571
V AL ++H H +++RD+ N+LL +E +++DFG+ K T F GT
Sbjct: 105 VTLALMFLHRHG----VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTP 160
Query: 572 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
Y+APE+ ++ D ++ GVL E++ G+ P
Sbjct: 161 DYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 2e-08
Identities = 55/196 (28%), Positives = 89/196 (45%), Gaps = 34/196 (17%)
Query: 425 SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP-RHSF----LV 479
+ E VA+KK + + I +R L EIK L + H N++ P R +F +V
Sbjct: 29 TNEKVAIKKIANAFDNRIDAKRT-LREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIV 87
Query: 480 YECLERGSLAEI------LSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDI 533
YE ++ L +I LS+D ++R L Y+H ++HRD+
Sbjct: 88 YELMDT-DLHQIIRSSQTLSDDHCQYFLYQLLR---------GLKYIHS---ANVLHRDL 134
Query: 534 SSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL-----AYTMKVTEKC 588
N+LL++ + ++ DFG+A+ TE+ T Y APEL YT +
Sbjct: 135 KPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAI---- 190
Query: 589 DVYSFGVLALEVIKGK 604
DV+S G + E++ K
Sbjct: 191 DVWSVGCIFAELLGRK 206
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 2e-08
Identities = 64/235 (27%), Positives = 101/235 (42%), Gaps = 51/235 (21%)
Query: 404 FDAEQCIGIGGQASVY---RGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
++ E CIG G VY R G+ A+KKF + + EI L E++H
Sbjct: 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH 61
Query: 461 RNIVKFYG-FCSHPRHS-FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKS----VA 514
N+V F H S +L+++ E L +I+ K S + +++KS +
Sbjct: 62 ENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVS--IPPSMVKSLLWQIL 118
Query: 515 NALSYMHHDCFPPIVHRDISSKNVLLSSEYEAR----VSDFGIAKF----LKPGSSNWTE 566
N + Y+H + ++HRD+ N+L+ E R + D G+A+ LKP
Sbjct: 119 NGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKP------- 168
Query: 567 FAG------TFGYVAPELA-----YTMKVTEKCDVYSFG-----VLALEVI-KGK 604
A T Y APEL YT + D+++ G +L LE I KG+
Sbjct: 169 LADLDPVVVTIWYRAPELLLGARHYTKAI----DIWAIGCIFAELLTLEPIFKGR 219
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 2e-08
Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 417 SVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGF---CSH 472
S E E VA+KK ++ +I +R L E+K L R H+NI Y
Sbjct: 18 SARNAETSEEETVAIKKITNVFSKKILAKRA-LRELKLLRHFRGHKNITCLYDMDIVFPG 76
Query: 473 PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRD 532
+ +YE L L +I+ + + + + + I + L Y+H ++HRD
Sbjct: 77 NFNELYLYEELMEADLHQIIRSGQPLTDAHF---QSFIYQILCGLKYIHS---ANVLHRD 130
Query: 533 ISSKNVLLSSEYEARVSDFGIAKFLKPG----SSNWTEFAGTFGYVAPELAYTMK-VTEK 587
+ N+L++++ E ++ DFG+A+ + TE+ T Y APE+ + + T+
Sbjct: 131 LKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKA 190
Query: 588 CDVYSFGVLALEVIKGK 604
DV+S G + E++ K
Sbjct: 191 IDVWSVGCILAELLGRK 207
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 2e-08
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 44/231 (19%)
Query: 403 NFDAEQCIGIGGQASVYR----GELPSGE--VVAVKKFHSLLLSEIS--VQREFLNEIKA 454
N + + IG G V++ G LP +VAVK +L E S +Q +F E
Sbjct: 6 NIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVK----MLKEEASADMQADFQREAAL 61
Query: 455 LTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEIL-------------------SND 495
+ E H NIVK G C+ + L++E + G L E L
Sbjct: 62 MAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCG 121
Query: 496 GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGI-- 553
+ S + + K VA ++Y+ F VHRD++++N L+ +++DFG+
Sbjct: 122 LNPLPLSCTEQLCIAKQVAAGMAYLSERKF---VHRDLATRNCLVGENMVVKIADFGLSR 178
Query: 554 ----AKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEV 600
A + K ++ A ++ PE + + T + DV+++GV+ E+
Sbjct: 179 NIYSADYYKASEND----AIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 225
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 3e-08
Identities = 65/269 (24%), Positives = 121/269 (44%), Gaps = 29/269 (10%)
Query: 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGF 469
+G G VY+ + V+A K SE ++ +++ EI L H NIVK
Sbjct: 13 LGDGAFGKVYKAQNKETGVLAAAKVIDTK-SEEELE-DYMVEIDILASCDHPNIVKLLDA 70
Query: 470 CSHPRHSFLVYECLERGSL-AEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPI 528
+ + +++ E G++ A +L + + E V V K AL+Y+H + I
Sbjct: 71 FYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRV---VCKQTLEALNYLHEN---KI 124
Query: 529 VHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTE-- 586
+HRD+ + N+L + + + +++DFG++ F GT ++APE+ +
Sbjct: 125 IHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 184
Query: 587 ---KCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR---NIQ 640
K DV+S G+ +E+ + + P ++ + + L + + P L PSR +
Sbjct: 185 YDYKADVWSLGITLIEMAQIEPPHHELNPM-----RVLLKIAKSEPPTLAQPSRWSSEFK 239
Query: 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669
D L CLE++ ++R T + Q
Sbjct: 240 DFLKK-------CLEKNVDARWTTTQLLQ 261
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Score = 55.4 bits (133), Expect = 3e-08
Identities = 60/243 (24%), Positives = 112/243 (46%), Gaps = 40/243 (16%)
Query: 445 QREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLERGSL------AEILSNDGS 497
R+F E++ L ++ H NI+ G C + + ++ E G+L + +L D +
Sbjct: 46 HRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPA 105
Query: 498 I-KEF---SWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGI 553
KE S + +++ ++ + M + +HRD++++NVL+ ++++DFG+
Sbjct: 106 FAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGL 165
Query: 554 AKFLKPGSSNWTEFAGTFG-----YVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHPR 607
++ G + + T G ++A E L Y++ T K DV+SFGVL E+
Sbjct: 166 SR----GEEVYVK--KTMGRLPVRWMAIESLNYSVYTT-KSDVWSFGVLLWEI------- 211
Query: 608 DFISLLSSSSSNMNLS-LNEILDP--RLPLPSRNIQDKLISILEVALLCLEESPESRPTM 664
+SL + M + L E L R+ P RN D+ + E+ C + P RP
Sbjct: 212 --VSLGGTPYCGMTCAELYEKLPQGYRMEKP-RNCDDE---VYELMRQCWRDRPYERPPF 265
Query: 665 QTV 667
+
Sbjct: 266 AQI 268
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 3e-08
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 29/197 (14%)
Query: 399 RATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSE-----ISVQREFLNEI 452
R FD IG G VY+ + +GE+VA+KK L +E I+ RE I
Sbjct: 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVR--LDNEKEGFPITAIRE----I 57
Query: 453 KALTEIRHRNIVKFY----------GFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFS 502
K L ++ HRNIV F +LV+E ++ L +L + + FS
Sbjct: 58 KILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLL--ESGLVHFS 114
Query: 503 WIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562
+ +K + L+Y H F +HRDI N+LL+++ + +++DFG+A+ S
Sbjct: 115 EDHIKSFMKQLLEGLNYCHKKNF---LHRDIKCSNILLNNKGQIKLADFGLARLYNSEES 171
Query: 563 N-WTEFAGTFGYVAPEL 578
+T T Y PEL
Sbjct: 172 RPYTNKVITLWYRPPEL 188
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 3e-08
Identities = 66/263 (25%), Positives = 112/263 (42%), Gaps = 55/263 (20%)
Query: 424 PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH-RNIVKFYGFCSHPRHSFL---V 479
P+G ++AVK+ + + Q+ L ++ V FYG F V
Sbjct: 24 PTGTIMAVKRIRATV--NSQEQKRLLMDLDISMRSVDCPYTVTFYGAL------FREGDV 75
Query: 480 YECLE--RGSL----AEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDI 533
+ C+E SL ++ +I E + + V S+ AL Y+H ++HRD+
Sbjct: 76 WICMEVMDTSLDKFYKKVYDKGLTIPE-DILGKIAV--SIVKALEYLHSKL--SVIHRDV 130
Query: 534 SSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL--------AYTMKVT 585
NVL++ + ++ DFGI+ +L S T AG Y+APE Y +
Sbjct: 131 KPSNVLINRNGQVKLCDFGISGYLV-DSVAKTIDAGCKPYMAPERINPELNQKGYDV--- 186
Query: 586 EKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD---PRLPLP--SRNIQ 640
K DV+S G+ +E+ G+ P D S L ++++ P+LP S Q
Sbjct: 187 -KSDVWSLGITMIELATGRFPYD-------SWKTPFQQLKQVVEEPSPQLPAEKFSPEFQ 238
Query: 641 DKLISILEVALLCLEESPESRPT 663
D ++ CL+++ + RP
Sbjct: 239 D-FVNK------CLKKNYKERPN 254
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 4e-08
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
N + G IPPS+G+ T+L+ L L NS +GS+P +G L L L ++ N L G++P +L
Sbjct: 452 NSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAAL 510
|
Length = 623 |
| >gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 4e-08
Identities = 68/291 (23%), Positives = 117/291 (40%), Gaps = 62/291 (21%)
Query: 408 QCIGIGGQASVYRGELPSGEV---VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIV 464
+ +G G SV G+L + VAVK + + ++ +FL+E + E H N++
Sbjct: 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEME-DFLSEAVCMKEFDHPNVM 63
Query: 465 KFYGFC-------SHPR-------------HSFLVYECLERGSLAEILSNDGSIKEFSWI 504
+ G C +P HSFL+Y L G + L +K
Sbjct: 64 RLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRL--GDCPQYLPTQMLVK----- 116
Query: 505 VRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW 564
+ +A+ + Y+ F +HRD++++N +L+ V+DFG++K + G
Sbjct: 117 ----FMTDIASGMEYLSSKSF---IHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYR 169
Query: 565 TEFAGTF--GYVAPELAYTMKVTEKCDVYSFGVLALEV-IKGKHPRDFISLLSSSSSNMN 621
++A E T K DV+SFGV E+ +G+ P
Sbjct: 170 QGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYP------------G 217
Query: 622 LSLNEILD-----PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTV 667
+ +EI D RL P D L + + C +P+ RP+ +T+
Sbjct: 218 VENSEIYDYLRQGNRLKQPP----DCLDGLYSLMSSCWLLNPKDRPSFETL 264
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272 |
| >gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 54.7 bits (131), Expect = 4e-08
Identities = 63/250 (25%), Positives = 108/250 (43%), Gaps = 47/250 (18%)
Query: 445 QREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSW 503
R+F E++ L ++ H NI+ G C H + +L E G+L + L ++
Sbjct: 39 HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA 98
Query: 504 IVRTNVIKSV-------------ANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSD 550
N S A + Y+ F +HRD++++N+L+ Y A+++D
Sbjct: 99 FAIANSTASTLSSQQLLHFAADVARGMDYLSQKQF---IHRDLAARNILVGENYVAKIAD 155
Query: 551 FGIAKFLKPGSSNWTEFAGTFG-----YVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGK 604
FG+++ G + + T G ++A E L Y++ T DV+S+GVL E+
Sbjct: 156 FGLSR----GQEVYVK--KTMGRLPVRWMAIESLNYSVYTT-NSDVWSYGVLLWEI---- 204
Query: 605 HPRDFISLLSSSSSNMNLS-LNEILDP--RLPLPSRNIQDKLISILEVALLCLEESPESR 661
+SL + M + L E L RL P N D+ + ++ C E P R
Sbjct: 205 -----VSLGGTPYCGMTCAELYEKLPQGYRLEKP-LNCDDE---VYDLMRQCWREKPYER 255
Query: 662 PTM-QTVCQL 670
P+ Q + L
Sbjct: 256 PSFAQILVSL 265
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 4e-08
Identities = 42/175 (24%), Positives = 84/175 (48%), Gaps = 29/175 (16%)
Query: 447 EFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIK-EFSWI 504
+ ++E++ + I +H+NI+ G C+ +++ E +G+L E L E+S+
Sbjct: 66 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 125
Query: 505 VR------------TNVIKSVANALSYM-HHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551
+ + VA + Y+ C +HRD++++NVL++ +++DF
Sbjct: 126 IARVPDEQMTFKDLVSCTYQVARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADF 181
Query: 552 GIAKFLKPGSSNWTEFAGT------FGYVAPELAYTMKVTEKCDVYSFGVLALEV 600
G+A+ + +N + T ++APE + T + DV+SFGVL E+
Sbjct: 182 GLARDV----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 232
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 4e-08
Identities = 61/280 (21%), Positives = 119/280 (42%), Gaps = 54/280 (19%)
Query: 418 VYRGEL-----PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH 472
+Y+G L ++VA+K + + EF E + E+ H NIV G +
Sbjct: 21 IYKGHLYLPGMDHAQLVAIKTLKDI--NNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQ 78
Query: 473 PRHSFLVYECLERGSLAEIL-------------SNDGSIK------EFSWIVRTNVIKSV 513
+ +++E L +G L E L DG++K +F ++ +
Sbjct: 79 EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDF-----LHIAIQI 133
Query: 514 ANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT--- 570
A + Y+ F VH+D++++N+L+ + ++SD G+++ + S+++
Sbjct: 134 AAGMEYLSSHFF---VHKDLAARNILIGEQLHVKISDLGLSREIY--SADYYRVQPKSLL 188
Query: 571 -FGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEIL 628
++ PE K + D++SFGV+ E+ G P S N + E++
Sbjct: 189 PIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS---------NQEVIEMV 239
Query: 629 DPRLPLP-SRNIQDKLISILEVALLCLEESPESRPTMQTV 667
R LP S + ++ S++ C +E P RP + +
Sbjct: 240 RKRQLLPCSEDCPPRMYSLMTE---CWQEGPSRRPRFKDI 276
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 5e-08
Identities = 57/222 (25%), Positives = 87/222 (39%), Gaps = 46/222 (20%)
Query: 410 IGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG GG VY P VA+KK L +++ FL E K ++ H IV Y
Sbjct: 10 IGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYS 69
Query: 469 FCSHPRHSFLVYECL----------------ERGSLAEILSNDGSIKEFSWIVRTNVIKS 512
CS VY + ++ SL++ L+ S+ F I
Sbjct: 70 ICSD---GDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHK----- 121
Query: 513 VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK-------------P 559
+ + Y+H ++HRD+ N+LL E + D+G A F K
Sbjct: 122 ICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDER 178
Query: 560 GS--SNWT---EFAGTFGYVAPELAYTMKVTEKCDVYSFGVL 596
S+ T + GT Y+APE + +E D+Y+ GV+
Sbjct: 179 NICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVI 220
|
Length = 932 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 5e-08
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 513 VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGTF 571
+A L ++H I++RD+ NV+L +E +++DFG+ K + G + T F GT
Sbjct: 110 IAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRT-FCGTP 165
Query: 572 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD 608
Y+APE+ + D ++FGVL E++ G+ P D
Sbjct: 166 DYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFD 202
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 5e-08
Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 58/241 (24%)
Query: 400 ATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSE-----ISVQREFLNEIK 453
++++ +G G VY+ ++ +G VVA+KK L+ +E I+ RE IK
Sbjct: 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKI--LMHNEKDGFPITALRE----IK 59
Query: 454 ALTEIRHRNIVKF--YGFCSHPRHSFLVYECLERGS-----------LAEILSNDGSIK- 499
L +++H N+V + +RGS L+ +L N S+K
Sbjct: 60 ILKKLKHPNVVPLIDMAVERPDKSKR------KRGSVYMVTPYMDHDLSGLLENP-SVKL 112
Query: 500 EFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA----- 554
S I + + ++Y+H + I+HRDI + N+L+ ++ +++DFG+A
Sbjct: 113 TESQI--KCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLARPYDG 167
Query: 555 ---KFLKPGSSNWTEFAG---TFGYVAPELA-----YTMKVTEKCDVYSFGVLALEVIKG 603
G ++ T Y PEL YT V D++ G + E+
Sbjct: 168 PPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAV----DIWGIGCVFAEMFTR 223
Query: 604 K 604
+
Sbjct: 224 R 224
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 55.0 bits (132), Expect = 6e-08
Identities = 63/274 (22%), Positives = 121/274 (44%), Gaps = 24/274 (8%)
Query: 394 YEEIIRATK-------NFDAEQCIGIG--GQASVYRGELPSGEVVAVKKFHSLLLSEISV 444
YE+I+R + ++D + IG G G+ + R + S +V A+K + + S
Sbjct: 28 YEKIVRKIRKLQMKAEDYDVVKVIGRGAFGEVQLVRHK-SSQKVYAMKLLSKFEMIKRSD 86
Query: 445 QREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWI 504
F E + +V+ + ++ ++V E + G L ++SN ++++
Sbjct: 87 SAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKF 146
Query: 505 VRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA-KFLKPGSSN 563
V+ ++ +A+ M ++HRD+ N+LL +++DFG K + G
Sbjct: 147 YTAEVVLAL-DAIHSMG------LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVR 199
Query: 564 WTEFAGTFGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN 619
GT Y++PE+ + +CD +S GV E++ G P SL+ + S
Sbjct: 200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKI 259
Query: 620 MNL--SLNEILDPRLPLPSRNIQDKLISILEVAL 651
M+ SLN D + ++N+ ++ EV L
Sbjct: 260 MDHKNSLNFPEDVEISKHAKNLICAFLTDREVRL 293
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 7e-08
Identities = 65/288 (22%), Positives = 123/288 (42%), Gaps = 52/288 (18%)
Query: 410 IGIGGQASVYRG---ELPSGEV---VAVKKFH-SLLLSEISVQREFLNEIKALTEIRHRN 462
+G G VY G ++ GE VAVK + S L E + EFLNE + +
Sbjct: 14 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE---RIEFLNEASVMKGFTCHH 70
Query: 463 IVKFYGFCSHPRHSFLVYECLERGSLAEIL--------SNDGS----IKEFSWIVRTNVI 510
+V+ G S + + +V E + G L L +N G ++E +
Sbjct: 71 VVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM-----IQMA 125
Query: 511 KSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK------FLKPGSSNW 564
+A+ ++Y++ F VHRD++++N +++ ++ ++ DFG+ + + + G
Sbjct: 126 AEIADGMAYLNAKKF---VHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGL 182
Query: 565 TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLS 623
+APE T D++SFGV+ E+ + P + SN +
Sbjct: 183 LPVRW----MAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL-------SNEQV- 230
Query: 624 LNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
L ++D N +++ ++ +C + +P+ RPT + LL
Sbjct: 231 LKFVMDGGYLDQPDNCPERVTDLMR---MCWQFNPKMRPTFLEIVNLL 275
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 7e-08
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 233 QLSELDLSHNFLGGEIPPQIC-NLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNE 291
L LDLS+N L IP L +L+ L++S NNL+ + P F G+ L +D+S N
Sbjct: 1 NLKSLDLSNNRLT-VIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNN 59
Query: 292 L 292
L
Sbjct: 60 L 60
|
Length = 60 |
| >gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 8e-08
Identities = 71/284 (25%), Positives = 121/284 (42%), Gaps = 38/284 (13%)
Query: 408 QCIGIGGQASVYRGEL---PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIV 464
Q IG G V E+ V VK+ + S+ Q EFL + ++H NI+
Sbjct: 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSK--EQNEFLQQGDPYRILQHPNIL 58
Query: 465 KFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIK-SVANALSYMHHD 523
+ G C LV+E E G L LS + + S ++ + +A +++MH
Sbjct: 59 QCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH 118
Query: 524 CFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE-FAGT-------FGYVA 575
F +H D++ +N L+S+ +V D+GI G S + E + T ++A
Sbjct: 119 NF---LHSDLALRNCFLTSDLTVKVGDYGI------GPSRYKEDYIETEDDKCVPLRWLA 169
Query: 576 PELA-------YTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEI 627
PEL T + T+ +V++ GV E+ + P +S + + ++
Sbjct: 170 PELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKL 229
Query: 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
P+L LP ++ +L+ L SPE R T + V +LL
Sbjct: 230 FKPQLELP---YSERWYEVLQFCWL----SPEKRATAEEVHRLL 266
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 54.3 bits (131), Expect = 8e-08
Identities = 66/305 (21%), Positives = 116/305 (38%), Gaps = 62/305 (20%)
Query: 409 CIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
C + + + P+ +VAVKK + S+ ++ EI +++H NI+ +
Sbjct: 9 CFEDLMIVHLAKHK-PTNTLVAVKKINLDSCSKEDLKLLQ-QEIITSRQLQHPNILPYVT 66
Query: 469 FCSHPRHSFLVYECLERGSLAEILSN---DGSIKEFSWIVRTNVIKSVANALSYMHHDCF 525
++V + GS ++L +G + ++K V NAL Y+H F
Sbjct: 67 SFIVDSELYVVSPLMAYGSCEDLLKTHFPEG----LPELAIAFILKDVLNALDYIHSKGF 122
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIA-KFLKPGSSNWTEFAGTFG--------YVAP 576
+HR + + ++LLS + + +S + +K G F +++P
Sbjct: 123 ---IHRSVKASHILLSGDGKVVLSGLRYSVSMIKHG--KRQRVVHDFPKSSVKNLPWLSP 177
Query: 577 ELAYT--MKVTEKCDVYSFGVLA-------------------LEVIKGKHPRDFISLLSS 615
E+ EK D+YS G+ A LE ++G P LL
Sbjct: 178 EVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVP----CLLDK 233
Query: 616 SSSNMNLSLNEILDPRLPLPSRNIQD-------KLIS--ILEVALLCLEESPESRPTMQT 666
S+ + + R N +D + S + LCL+ PESRP+
Sbjct: 234 STYPLYED--SMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSAS- 290
Query: 667 VCQLL 671
QLL
Sbjct: 291 --QLL 293
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 54.3 bits (130), Expect = 9e-08
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 411 GIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQRE----FLNEIKALTEIRHRNIVKF 466
G G+ + R E SG+ A+K +L E+ + ++ L E + L RH +
Sbjct: 6 GTFGKVILVR-EKASGKYYAMK----ILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSL 60
Query: 467 -YGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKS-VANALSYMHHDC 524
Y F + R F V E + G L LS + E RT + + +AL Y+H
Sbjct: 61 KYSFQTKDRLCF-VMEYVNGGELFFHLSRERVFSE----DRTRFYGAEIVSALDYLHSG- 114
Query: 525 FPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKV 584
IV+RD+ +N++L + +++DFG+ K ++ F GT Y+APE+
Sbjct: 115 --KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDY 172
Query: 585 TEKCDVYSFGVLALEVIKGKHP 606
D + GV+ E++ G+ P
Sbjct: 173 GRAVDWWGLGVVMYEMMCGRLP 194
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 1e-07
Identities = 67/225 (29%), Positives = 105/225 (46%), Gaps = 37/225 (16%)
Query: 402 KNFDAEQCIGIG--GQASVYRGELPSGEVVAVKKF-HSLLLSEISVQREFLNEIKALTEI 458
K+FD + +G G G+ V R E +G++ A+K S+LL++ +V F E + + I
Sbjct: 1 KDFDVKSLVGRGHFGEVQVVR-EKATGDIYAMKVMKKSVLLAQETVS--FFEEERDILSI 57
Query: 459 RHRN-IVKF-YGFCSHPRHSFLVYECLERGSLAEILSN-----DGSIKEFSWIVRTNVIK 511
+ I + Y F + +LV E G L +L+ D + +F I
Sbjct: 58 SNSPWIPQLQYAF-QDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIH 116
Query: 512 SVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA--- 568
SV + + Y VHRDI +NVL+ +++DFG A L ++N +
Sbjct: 117 SV-HQMGY---------VHRDIKPENVLIDRTGHIKLADFGSAARL---TANKMVNSKLP 163
Query: 569 -GTFGYVAPELAYTMKVTEK------CDVYSFGVLALEVIKGKHP 606
GT Y+APE+ TM K CD +S GV+A E+I G+ P
Sbjct: 164 VGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSP 208
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 1e-07
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 15/149 (10%)
Query: 529 VHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT---FGYVAPELAYTMKVT 585
+HRD++++NVLL+ A++ DFG+A+ + SN+ ++APE + T
Sbjct: 234 IHRDVAARNVLLTDGRVAKICDFGLARDIM-NDSNYVVKGNARLPVKWMAPESIFDCVYT 292
Query: 586 EKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLI 644
+ DV+S+G+L E+ GK P I L++S M ++ P P ++
Sbjct: 293 VQSDVWSYGILLWEIFSLGKSPYPGI-LVNSKFYKMVKRGYQMSRPDFAPP------EIY 345
Query: 645 SILEVALLCLEESPESRPTMQTVCQLLCK 673
SI++ +C P RPT + QL+ +
Sbjct: 346 SIMK---MCWNLEPTERPTFSQISQLIQR 371
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 53.6 bits (129), Expect = 1e-07
Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 410 IGIGGQASVYRGE-LPSGEVVAVKKFHSLLLS-EISVQREF----------LNEIKALTE 457
+G G V + +G++VA+KK + +S +++ R+ L E+K + E
Sbjct: 17 LGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNE 76
Query: 458 IRHRNIVKFYG-FCSHPRHSF--LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA 514
I+H NI+ + F LV + + L +++ D I+ + ++ +
Sbjct: 77 IKHENIMGLVDVYVEG---DFINLVMDIMA-SDLKKVV--DRKIR-LTESQVKCILLQIL 129
Query: 515 NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA-KFLKPGSS----------- 562
N L+ +H + +HRD+S N+ ++S+ +++DFG+A ++ P S
Sbjct: 130 NGLNVLH-KWY--FMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQR 186
Query: 563 --NWTEFAGTFGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGK 604
T T Y APEL K D++S G + E++ GK
Sbjct: 187 REEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231
|
Length = 335 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 1e-07
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 528 IVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEK 587
IV+RD+ +N+LL R+SD G+A + P GT GY+APE+ + T
Sbjct: 123 IVYRDLKPENILLDDHGHIRISDLGLAVHV-PEGQTIKGRVGTVGYMAPEVVKNERYTFS 181
Query: 588 CDVYSFGVLALEVIKGKHP 606
D ++ G L E+I G+ P
Sbjct: 182 PDWWALGCLLYEMIAGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 53.4 bits (128), Expect = 2e-07
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 9/124 (7%)
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGTFGYV 574
AL ++H IV+RDI +N+LL SE ++DFG++K FL F GT Y+
Sbjct: 117 ALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYM 173
Query: 575 APELAYTMKVTEKC-DVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633
APE+ K D +S G+L E++ G P +L ++ +S IL P
Sbjct: 174 APEIIRGKGGHGKAVDWWSLGILIFELLTGASP---FTLEGERNTQSEVS-RRILKCDPP 229
Query: 634 LPSR 637
PS
Sbjct: 230 FPSF 233
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 2e-07
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 51/223 (22%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQRE---FLNEIKALTEIRHRN--- 462
IG G +V + PSG ++AVK+ S ++E L ++ + +R +
Sbjct: 12 IGRGAFGTVNKMLHKPSGTIMAVKRIRS-----TVDEKEQKRLLMDLDVV--MRSSDCPY 64
Query: 463 IVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTN------------VI 510
IVKFYG ++ C+E L +I S+ +F V +
Sbjct: 65 IVKFYGALFREGDCWI---CME---LMDI-----SLDKFYKYVYEVLKSVIPEEILGKIA 113
Query: 511 KSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT 570
+ AL+Y+ + I+HRD+ N+LL ++ DFGI+ L S T AG
Sbjct: 114 VATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQLV-DSIAKTRDAGC 170
Query: 571 FGYVAPEL-------AYTMKVTEKCDVYSFGVLALEVIKGKHP 606
Y+APE Y + + DV+S G+ EV GK P
Sbjct: 171 RPYMAPERIDPSARDGYDV----RSDVWSLGITLYEVATGKFP 209
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 2e-07
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 25/152 (16%)
Query: 529 VHRDISSKNVLLSSEYEARVSDFGIAK-------FLKPGSSNWTEFAGTFGYVAPELAYT 581
+HRD++++N+LLS ++ DFG+A+ +++ GS+ ++APE +
Sbjct: 196 IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARL-----PLKWMAPESIFD 250
Query: 582 MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641
T + DV+SFGVL E+ SL +S + +NE RL +R
Sbjct: 251 KVYTTQSDVWSFGVLLWEI---------FSL--GASPYPGVQINEEFCQRLKDGTRMRAP 299
Query: 642 KLIS--ILEVALLCLEESPESRPTMQTVCQLL 671
+ + I + L C + P+ RPT + ++L
Sbjct: 300 ENATPEIYRIMLACWQGDPKERPTFSALVEIL 331
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338 |
| >gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 2e-07
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 25/152 (16%)
Query: 529 VHRDISSKNVLLSSEYEARVSDFGIAK-------FLKPGSSNWTEFAGTFGYVAPELAYT 581
+HRD++++N+LLS ++ DFG+A+ +++ G + ++APE +
Sbjct: 195 IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL-----PLKWMAPESIFD 249
Query: 582 MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR--NI 639
T + DV+SFGVL E+ SL +S + ++E RL +R
Sbjct: 250 KVYTTQSDVWSFGVLLWEI---------FSL--GASPYPGVQIDEEFCRRLKEGTRMRAP 298
Query: 640 QDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ I + L C +PE RPT + ++L
Sbjct: 299 EYATPEIYSIMLDCWHNNPEDRPTFSELVEIL 330
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 2e-07
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSK 536
+ V E + G L + G KE + ++ L ++H I++RD+
Sbjct: 77 YFVMEYVNGGDLMYHIQQVGKFKEPQAVFYA---AEISVGLFFLHRR---GIIYRDLKLD 130
Query: 537 NVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGV 595
NV+L SE +++DFG+ K + G + T F GT Y+APE+ + D +++GV
Sbjct: 131 NVMLDSEGHIKIADFGMCKEHMVDGVTTRT-FCGTPDYIAPEIIAYQPYGKSVDWWAYGV 189
Query: 596 LALEVIKGKHPRD 608
L E++ G+ P D
Sbjct: 190 LLYEMLAGQPPFD 202
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 2e-07
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 15/201 (7%)
Query: 410 IGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG G VY+G +G++VA+KK L E V + EI L E++H NIV
Sbjct: 8 IGEGTYGVVYKGRNKKTGQIVAMKKIR-LESEEEGVPSTAIREISLLKELQHPNIVCLQD 66
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPI 528
+L++E L L + L + + + + + + + + H +
Sbjct: 67 VLMQESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RV 122
Query: 529 VHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL-----AYTMK 583
+HRD+ +N+L+ ++ +++DFG+A+ +T T Y APE+ Y+
Sbjct: 123 LHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTP 182
Query: 584 VTEKCDVYSFGVLALEVIKGK 604
V D++S G + E+ K
Sbjct: 183 V----DIWSIGTIFAEMATKK 199
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 2e-07
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 422 ELPSGEVVAVKKFHSLLLSEISVQRE----FLNEIKALTEIRHRNIVKF-YGFCSHPRHS 476
E +G A+K +L E+ V ++ L E + L RH + Y F +H R
Sbjct: 16 EKATGRYYAMK----ILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLC 71
Query: 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSK 536
F V E G L LS + + FS + +AL Y+H + +V+RD+ +
Sbjct: 72 F-VMEYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLE 125
Query: 537 NVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGV 595
N++L + +++DFG+ K +K G++ T F GT Y+APE+ D + GV
Sbjct: 126 NLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGV 184
Query: 596 LALEVIKGKHP 606
+ E++ G+ P
Sbjct: 185 VMYEMMCGRLP 195
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 2e-07
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 27/161 (16%)
Query: 512 SVANALSYM--HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAG 569
++ AL Y+ H ++HRD+ N+LL + ++ DFGI+ L + T AG
Sbjct: 122 AIVKALHYLKEKHG----VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAK-TRSAG 176
Query: 570 TFGYVAPELAYTMKVTEK----CDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLS-L 624
Y+APE K DV+S G+ +E+ G+ P + L
Sbjct: 177 CAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYK--------NCKTEFEVL 228
Query: 625 NEILD---PRLPLPSRNIQDKLISILEVALLCLEESPESRP 662
+IL P LP P+ S ++ LCL + RP
Sbjct: 229 TKILQEEPPSLP-PNEGFSPDFCSFVD---LCLTKDHRKRP 265
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 2e-07
Identities = 54/231 (23%), Positives = 95/231 (41%), Gaps = 34/231 (14%)
Query: 448 FLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRT 507
F ++++ H+++V YG C S +V E ++ GSL L + ++ SW +
Sbjct: 46 FFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISW--KL 103
Query: 508 NVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS----- 562
V K +A AL ++ + H ++ +KNVLL E + + + K PG S
Sbjct: 104 EVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP 160
Query: 563 -NWTEFAGTFGYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKG-KHPRDFISLLSSSSSN 619
+V PE + ++ D +SFG E+ G P +S L S
Sbjct: 161 KEI--LLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKP---LSALDSQKK- 214
Query: 620 MNLSLNEILDPRLPLPSRNIQDKLISILEVALL---CLEESPESRPTMQTV 667
+ + R LP+ E+A L C++ P+ RP+ + +
Sbjct: 215 -----LQFYEDRHQLPAPK-------WTELANLINQCMDYEPDFRPSFRAI 253
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258 |
| >gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 2e-07
Identities = 69/285 (24%), Positives = 124/285 (43%), Gaps = 43/285 (15%)
Query: 410 IGIGGQASVYRGELPSG---EVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
IG G V GE+ SG V VK+ + + Q +FL E + ++H N+++
Sbjct: 3 IGNGWFGKVILGEVNSGYTPAQVVVKELRVS--ASVQEQMKFLEEAQPYRSLQHSNLLQC 60
Query: 467 YGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRT--NVIKSVANALSYMHHDC 524
G C+ LV E G L L + + + T + +A L ++H +
Sbjct: 61 LGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN 120
Query: 525 FPPIVHRDISSKNVLLSSEYEARVSDFGIAK-------FLKPGSSNWTEFAGTFGYVAPE 577
F +H D++ +N LL+++ ++ D+G++ ++ P W ++APE
Sbjct: 121 F---IHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTP-DQLWVPLR----WIAPE 172
Query: 578 LA-------YTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIS---LLSSSSSNMNLSLNE 626
L + T++ +V+S GV E+ + G P +S +L+ + L L +
Sbjct: 173 LVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPK 232
Query: 627 ILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
PRL LP + D+ +++ L PE RP+ + V LL
Sbjct: 233 ---PRLKLP---LSDRWYEVMQFCWL----QPEQRPSAEEVHLLL 267
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 2e-07
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 16/200 (8%)
Query: 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
+G G A+V++G + +VA+K+ L E + E+ L ++H NIV +
Sbjct: 13 LGEGTYATVFKGRSKLTENLVALKEIR--LEHEEGAPCTAIREVSLLKNLKHANIVTLHD 70
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNV---IKSVANALSYMHHDCF 525
R LV+E L+ L + L N G++ NV + + LSY H
Sbjct: 71 IIHTERCLTLVFEYLD-SDLKQYLDNCGNLMSMH-----NVKIFMFQLLRGLSYCHKR-- 122
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE-LAYTMKV 584
I+HRD+ +N+L++ + E +++DFG+A+ + ++ T Y P+ L + +
Sbjct: 123 -KILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEY 181
Query: 585 TEKCDVYSFGVLALEVIKGK 604
+ D++ G + E+ G+
Sbjct: 182 STPIDMWGVGCILYEMATGR 201
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 2e-07
Identities = 46/189 (24%), Positives = 88/189 (46%), Gaps = 21/189 (11%)
Query: 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM-HHDCFPPIVHRDISSKNV 538
Y+ + +LS+DGS + + + + VA + ++ +C VHRD++++NV
Sbjct: 214 YKGSNDSEVKNLLSDDGS-EGLTTLDLLSFTYQVARGMEFLASKNC----VHRDLAARNV 268
Query: 539 LLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF---GYVAPELAYTMKVTEKCDVYSFGV 595
LL+ ++ DFG+A+ + SN+ TF ++APE + T DV+S+G+
Sbjct: 269 LLAQGKIVKICDFGLARDIM-HDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGI 327
Query: 596 LALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCL 654
L E+ G P + + S+ + + R+ P Q+ + ++ + C
Sbjct: 328 LLWEIFSLGGTPYPGMIVDSTFYNKIKSGY------RMAKPDHATQE----VYDIMVKCW 377
Query: 655 EESPESRPT 663
PE RP+
Sbjct: 378 NSEPEKRPS 386
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 2e-07
Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 53/200 (26%)
Query: 429 VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSL 488
VAVKK S I +R + E++ L ++H N++ L
Sbjct: 43 VAVKKLSRPFQSLIHARRTY-RELRLLKHMKHENVI----------------------GL 79
Query: 489 AEILSNDGSIKEFS--WIVRT-------NVIK--------------SVANALSYMHHDCF 525
++ + SI+ F+ ++V N++K + L Y+H
Sbjct: 80 LDVFTPATSIENFNEVYLVTNLMGADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHS--- 136
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT-MKV 584
I+HRD+ NV ++ + E R+ DFG+A + T + T Y APE+ M
Sbjct: 137 AGIIHRDLKPSNVAVNEDCELRILDFGLA---RQADDEMTGYVATRWYRAPEIMLNWMHY 193
Query: 585 TEKCDVYSFGVLALEVIKGK 604
+ D++S G + E++KGK
Sbjct: 194 NQTVDIWSVGCIMAELLKGK 213
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 2e-07
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 529 VHRDISSKNVLLSSEYEARVSDFG-IAKFLKPGSSNWTEFAGTFGYVAPELAYTM----- 582
VHRDI NVLL R++DFG K + G+ + GT Y++PE+ M
Sbjct: 124 VHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMG 183
Query: 583 KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN 621
K +CD +S GV E++ G+ P SL+ + MN
Sbjct: 184 KYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 222
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 2e-07
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 21/171 (12%)
Query: 447 EFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILS------------ 493
+ ++E++ + I +H+NI+ G C+ +++ E +G+L E L
Sbjct: 69 DLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYN 128
Query: 494 -NDGSIKEFSWIVRTNVIKSVANALSYM-HHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551
++ S+ + VA + Y+ C +HRD++++NVL++ + +++DF
Sbjct: 129 PTQVPEEQLSFKDLVSCAYQVARGMEYLASKKC----IHRDLAARNVLVTEDNVMKIADF 184
Query: 552 GIAKFLKPGSSNWTEFAGTF--GYVAPELAYTMKVTEKCDVYSFGVLALEV 600
G+A+ + G ++APE + T + DV+SFGVL E+
Sbjct: 185 GLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 235
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 2e-07
Identities = 48/198 (24%), Positives = 98/198 (49%), Gaps = 12/198 (6%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
+G G A+VY+G +G++VA+K + +E V + E L ++H NIV +
Sbjct: 13 LGEGSYATVYKGISRINGQLVALKVIS--MKTEEGVPFTAIREASLLKGLKHANIVLLHD 70
Query: 469 FCSHPRHSF-LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPP 527
H + + V+E + ++ + G + ++ VR + + + L+Y+H
Sbjct: 71 II-HTKETLTFVFEYMHTDLAQYMIQHPGGLHPYN--VRLFMFQ-LLRGLAYIHGQ---H 123
Query: 528 IVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE-LAYTMKVTE 586
I+HRD+ +N+L+S E +++DFG+A+ S ++ T Y P+ L +
Sbjct: 124 ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSS 183
Query: 587 KCDVYSFGVLALEVIKGK 604
D++ G + +E+++G+
Sbjct: 184 ALDIWGAGCIFIEMLQGQ 201
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 52.7 bits (126), Expect = 3e-07
Identities = 27/81 (33%), Positives = 44/81 (54%)
Query: 528 IVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEK 587
I++RD+ NV+L SE +++DFG+ K F GT Y+APE+ +
Sbjct: 122 IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKS 181
Query: 588 CDVYSFGVLALEVIKGKHPRD 608
D ++FGVL E++ G+ P +
Sbjct: 182 VDWWAFGVLLYEMLAGQAPFE 202
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 53.1 bits (127), Expect = 3e-07
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 13/161 (8%)
Query: 466 FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF 525
FY F R+ ++V E + G L ++SN ++++ V+ AL +H F
Sbjct: 109 FYAF-QDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVL----ALDAIHSMGF 163
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIA-KFLKPGSSNWTEFAGTFGYVAPELAYTMK- 583
+HRD+ N+LL +++DFG K K G GT Y++PE+ +
Sbjct: 164 ---IHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGG 220
Query: 584 ---VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN 621
+CD +S GV E++ G P SL+ + S MN
Sbjct: 221 DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 261
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Score = 52.2 bits (125), Expect = 3e-07
Identities = 64/286 (22%), Positives = 116/286 (40%), Gaps = 50/286 (17%)
Query: 407 EQCIGIGGQASVYRG--ELPSGE--VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN 462
E+ +G G + RG +LPS VA+ + +R FL E L + H N
Sbjct: 10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAG--CSDKQRRGFLAEALTLGQFDHSN 67
Query: 463 IVKFYGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSYMH 521
IV+ G + +V E + G+L L ++G + + ++ +A+ + Y+
Sbjct: 68 IVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLM---GMLPGLASGMKYLS 124
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE--FAGTFG-----YV 574
+ VH+ +++ VL++S+ ++S F + +E + G +
Sbjct: 125 EMGY---VHKGLAAHKVLVNSDLVCKISGFR------RLQEDKSEAIYTTMSGKSPVLWA 175
Query: 575 APELAYTMKVTEKCDVYSFGVLALEVIK-GKHP------RDFISLLSSSSSNMNLSLNEI 627
APE + DV+SFG++ EV+ G+ P +D I +
Sbjct: 176 APEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF---------- 225
Query: 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673
RLP P RN + L ++ L C ++ RP + +L K
Sbjct: 226 ---RLPAP-RNCPNLLHQLM---LDCWQKERGERPRFSQIHSILSK 264
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 3e-07
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 31/193 (16%)
Query: 425 SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS-------F 477
+G VA+KK S I +R + E++ L + H N++ P S +
Sbjct: 39 TGRKVAIKKLSRPFQSAIHAKRTY-RELRLLKHMDHENVIGLLD-VFTPASSLEDFQDVY 96
Query: 478 LVYECLERGSLAEILS----NDGSIKEFSW-IVRTNVIKSVANALSYMHHDCFPPIVHRD 532
LV + L I+ +D I+ + I+R L Y+H I+HRD
Sbjct: 97 LVTHLMGA-DLNNIVKCQKLSDDHIQFLVYQILR---------GLKYIHS---AGIIHRD 143
Query: 533 ISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVY 591
+ N+ ++ + E ++ DFG+A + T + T Y APE+ M + D++
Sbjct: 144 LKPSNIAVNEDCELKILDFGLA---RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 200
Query: 592 SFGVLALEVIKGK 604
S G + E++ GK
Sbjct: 201 SVGCIMAELLTGK 213
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 3e-07
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 528 IVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEK 587
IV+RD+ +N+LL R+SD G+A + G + GT GY+APE+ + T
Sbjct: 123 IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGR-VGTVGYMAPEVVKNERYTFS 181
Query: 588 CDVYSFGVLALEVIKGKHP 606
D + G L E+I+GK P
Sbjct: 182 PDWWGLGCLIYEMIEGKSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 3e-07
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 509 VIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT-EF 567
I + AL ++H I++RDI +N+LL SE ++DFG++K F
Sbjct: 110 YIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSF 166
Query: 568 AGTFGYVAPELAYTMKV--TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625
GT Y+APE+ + D +S GVL E++ G P ++ +S +S
Sbjct: 167 CGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASP---FTVDGEQNSQSEIS-R 222
Query: 626 EILDPRLPLPSR---NIQDKLISILE 648
IL + P P +D + +LE
Sbjct: 223 RILKSKPPFPKTMSAEARDFIQKLLE 248
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 3e-07
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 4/93 (4%)
Query: 509 VIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA 568
+ K + L Y+H I+HRD+ ++N+ ++ + + D G A+F + + A
Sbjct: 162 IEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQF-PVVAPAFLGLA 217
Query: 569 GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI 601
GT APE+ K K D++S G++ E++
Sbjct: 218 GTVETNAPEVLARDKYNSKADIWSAGIVLFEML 250
|
Length = 357 |
| >gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 52.8 bits (126), Expect = 4e-07
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 5/154 (3%)
Query: 450 NEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNV 509
NEI AL + H NI+K +++++ + + + + K+ + +T
Sbjct: 212 NEILALGRLNHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRA 271
Query: 510 I-KSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA-KFLKPGSSNWTEF 567
I K + A+ Y+H ++HRDI +N+ L+ + + + DFG A F K + +
Sbjct: 272 IMKQLLCAVEYIHDK---KLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGW 328
Query: 568 AGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI 601
GT +PE+ E D++S G++ L+++
Sbjct: 329 VGTVATNSPEILAGDGYCEITDIWSCGLILLDML 362
|
Length = 501 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 52.3 bits (125), Expect = 4e-07
Identities = 42/175 (24%), Positives = 85/175 (48%), Gaps = 29/175 (16%)
Query: 447 EFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSN------DGSI- 498
+ ++E++ + I +H+NI+ G C+ +++ E +G+L E L D S
Sbjct: 63 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFD 122
Query: 499 ------KEFSWIVRTNVIKSVANALSYM-HHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551
++ ++ + VA + Y+ C +HRD++++NVL++ + +++DF
Sbjct: 123 TCKLPEEQLTFKDLVSCAYQVARGMEYLASQKC----IHRDLAARNVLVTEDNVMKIADF 178
Query: 552 GIAKFLKPGSSNWTEFAGT------FGYVAPELAYTMKVTEKCDVYSFGVLALEV 600
G+A+ + N + T ++APE + T + DV+SFGVL E+
Sbjct: 179 GLARDVH----NIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEI 229
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 4e-07
Identities = 47/200 (23%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 410 IGIGGQASVYRGELPSGE-VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
+G G A+V++G E +VA+K+ L E + E+ L +++H NIV +
Sbjct: 14 LGEGTYATVFKGRSKLTENLVALKEIR--LEHEEGAPCTAIREVSLLKDLKHANIVTLHD 71
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNV---IKSVANALSYMHHDCF 525
+ LV+E L++ L + + + G+I NV + + L+Y H
Sbjct: 72 IVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMH-----NVKIFLYQILRGLAYCHRR-- 123
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE-LAYTMKV 584
++HRD+ +N+L++ E +++DFG+A+ + ++ T Y P+ L + +
Sbjct: 124 -KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEY 182
Query: 585 TEKCDVYSFGVLALEVIKGK 604
+ + D++ G + E+ G+
Sbjct: 183 STQIDMWGVGCIFFEMASGR 202
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 4e-07
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 528 IVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEK 587
IV+RD+ +N+LL R+SD G+A + G + GT GY+APE+ K T
Sbjct: 123 IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGR-VGTVGYMAPEVINNEKYTFS 181
Query: 588 CDVYSFGVLALEVIKGKHP 606
D + G L E+I+G+ P
Sbjct: 182 PDWWGLGCLIYEMIQGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 4e-07
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 30/208 (14%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG G VY+ + +GE+VA+KK L + V + EI L E+ H NIV+
Sbjct: 7 IGEGTYGVVYKARDKLTGEIVALKKIR-LETEDEGVPSTAIREISLLKELNHPNIVRLLD 65
Query: 469 FCSHPRHSFLVYECLERG------SLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH- 521
+LV+E L+ S + IK + + + ++Y H
Sbjct: 66 VVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLY--------QLLQGIAYCHS 117
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL--- 578
H ++HRD+ +N+L+ E +++DFG+A+ +T T Y APE+
Sbjct: 118 HR----VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 173
Query: 579 --AYTMKVTEKCDVYSFGVLALEVIKGK 604
Y+ V D++S G + E++ +
Sbjct: 174 SRQYSTPV----DIWSIGCIFAEMVNRR 197
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 5e-07
Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 14/139 (10%)
Query: 529 VHRDISSKNVLLSSEYEARVSDFG-IAKFLKPGSSNWTEFAGTFGYVAPELAYTM----- 582
VHRDI NVLL R++DFG + L G+ GT Y++PE+ M
Sbjct: 124 VHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKG 183
Query: 583 KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDK 642
+ +CD +S GV E++ G+ P SL+ + MN + P + S +D
Sbjct: 184 RYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDL 243
Query: 643 LISILEVALLCLEESPESR 661
+ L+C SPE+R
Sbjct: 244 IRR-----LIC---SPETR 254
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 51.7 bits (124), Expect = 6e-07
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 34/212 (16%)
Query: 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG G V+ P G+ VA+KK ++ + +S +R F E+K L +H N++
Sbjct: 8 IGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVF-RELKMLCFFKHDNVLSALD 66
Query: 469 FCSHP-----RHSFLVYECLERGSLAEILSN----DGSIKEFSW-IVRTNVIKSVANALS 518
P ++V E ++ I+S +K F + I+R L
Sbjct: 67 ILQPPHIDPFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILR---------GLK 117
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS-NWTEFAGTFGYVAPE 577
Y+H I+HRDI N+L++S ++ DFG+A+ +P S + T+ T Y APE
Sbjct: 118 YLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPE 174
Query: 578 LA-----YTMKVTEKCDVYSFGVLALEVIKGK 604
+ YT V D++S G + E++ +
Sbjct: 175 ILMGSRHYTSAV----DIWSVGCIFAELLGRR 202
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 51.5 bits (123), Expect = 6e-07
Identities = 48/200 (24%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
+G G A+VY+G + +VA+K+ L E + E+ L +++H NIV +
Sbjct: 14 LGEGTYATVYKGRSKLTDNLVALKEIR--LEHEEGAPCTAIREVSLLKDLKHANIVTLHD 71
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNV---IKSVANALSYMHHDCF 525
+ LV+E L++ L + L + G+ I NV + + L+Y H
Sbjct: 72 IIHTEKSLTLVFEYLDK-DLKQYLDDCGNS-----INMHNVKLFLFQLLRGLNYCHRR-- 123
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE-LAYTMKV 584
++HRD+ +N+L++ E +++DFG+A+ + ++ T Y P+ L +
Sbjct: 124 -KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDY 182
Query: 585 TEKCDVYSFGVLALEVIKGK 604
+ + D++ G + E+ G+
Sbjct: 183 STQIDMWGVGCIFYEMSTGR 202
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 7e-07
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVA 575
L +H + V+RD+ +N+LL R+SD G+A + G S GT GY+A
Sbjct: 114 GLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGR-VGTVGYMA 169
Query: 576 PELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
PE+ + T D + G L E+I+G+ P
Sbjct: 170 PEVLNNQRYTLSPDYWGLGCLIYEMIEGQSP 200
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 7e-07
Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 11/183 (6%)
Query: 425 SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFY-GFCSHPRHSFLVYECL 483
+GE A+K + ++ + E L E+ H IV F R VY L
Sbjct: 42 TGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENR----VYFLL 97
Query: 484 ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543
E E+ ++ F V + A Y+H I++RD+ +N+LL ++
Sbjct: 98 EFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNK 154
Query: 544 YEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG 603
+V+DFG AK K +T GT Y+APE+ + + D ++ GVL E I G
Sbjct: 155 GHVKVTDFGFAK--KVPDRTFT-LCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAG 211
Query: 604 KHP 606
P
Sbjct: 212 YPP 214
|
Length = 329 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 8e-07
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 16/206 (7%)
Query: 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
+++ + +G G A+VY+G+ +G++VA+K L E + E L ++H
Sbjct: 6 SYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIR--LQEEEGTPFTAIREASLLKGLKHA 63
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNV---IKSVANALS 518
NIV + LV+E + + + G + NV + + LS
Sbjct: 64 NIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHP------ENVKLFLFQLLRGLS 117
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL 578
Y+H I+HRD+ +N+L+S E +++DFG+A+ S ++ T Y P++
Sbjct: 118 YIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDV 174
Query: 579 AYTMKVTEKC-DVYSFGVLALEVIKG 603
C D++ G + +E+I+G
Sbjct: 175 LLGSTEYSTCLDMWGVGCIFVEMIQG 200
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 50.6 bits (122), Expect = 8e-07
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 29/157 (18%)
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSI--KEFSWIVRTNVIKSVANAL 517
+ N +K Y + + L+ + ++ G L ++L +G + E I+R + AL
Sbjct: 68 NPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQ-----LVEAL 122
Query: 518 SYMH-HDCFPPIVHRDISSKNVLLS-SEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVA 575
+ +H H+ I+H DI +NVL ++ + D+G+ K + S + GT Y +
Sbjct: 123 NDLHKHN----IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPSC----YDGTLDYFS 174
Query: 576 PELAYTMKVT-EKCDVYSF-----GVLALEVIKGKHP 606
PE K+ D SF GVL E++ GKHP
Sbjct: 175 PE-----KIKGHNYD-VSFDWWAVGVLTYELLTGKHP 205
|
Length = 267 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 51.0 bits (122), Expect = 1e-06
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 18/183 (9%)
Query: 455 LTEIRHRNIVKF-YGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSV 513
L ++H IV Y F + + +L+ E L G L L +G E + +
Sbjct: 54 LEAVKHPFIVDLIYAFQTGGK-LYLILEYLSGGELFMHLEREGIFME---DTACFYLSEI 109
Query: 514 ANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGTFG 572
+ AL ++H I++RD+ +N+LL ++ +++DFG+ K + G+ T F GT
Sbjct: 110 SLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHT-FCGTIE 165
Query: 573 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRL 632
Y+APE+ + D +S G L +++ G P ++ N ++++IL +L
Sbjct: 166 YMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPP--------FTAENRKKTIDKILKGKL 217
Query: 633 PLP 635
LP
Sbjct: 218 NLP 220
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 50.8 bits (121), Expect = 1e-06
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 529 VHRDISSKNVLLSSEYEARVSDFG-IAKFLKPGSSNWTEFAGTFGYVAPELAYTM----- 582
VHRDI N+L+ R++DFG K ++ G+ + GT Y++PE+ M
Sbjct: 124 VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKG 183
Query: 583 KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN 621
K +CD +S GV E++ G+ P SL+ + MN
Sbjct: 184 KYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN 222
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 50.3 bits (120), Expect = 1e-06
Identities = 54/229 (23%), Positives = 95/229 (41%), Gaps = 46/229 (20%)
Query: 451 EIKALTEIRHRNIVKFYG-------------FCSHPRHSFLVYECLERGSLAEILSNDGS 497
E + L+++ H IVKF+ +C + E G + LS +
Sbjct: 52 EAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTG---KTLSENQV 108
Query: 498 IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557
+ W ++ + + YMH I+HRD+ +KN+ L + ++ DFG+++ L
Sbjct: 109 CE---WFIQLLL------GVHYMHQR---RILHRDLKAKNIFLKNNL-LKIGDFGVSRLL 155
Query: 558 KPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP---RDFISLLS 614
T F GT Y++PE K D++S G + E+ H ++F+S++
Sbjct: 156 MGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVV- 214
Query: 615 SSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPT 663
L + E P LP +L SI++ L + P RP+
Sbjct: 215 -------LRIVEGPTPSLP---ETYSRQLNSIMQSM---LNKDPSLRPS 250
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 1e-06
Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 33/259 (12%)
Query: 420 RGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479
RG P +VVA KF ++L++ +E+ L H IVK + L+
Sbjct: 88 RGSDPKEKVVA--KF--VMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLI 143
Query: 480 YECLERGSLAEILSNDGSIKE---FSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSK 536
E G L + + +KE F + + AL +H ++HRD+ S
Sbjct: 144 MEYGSGGDLNKQIKQ--RLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSA 198
Query: 537 NVLLSSEYEARVSDFGIAK------FLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDV 590
N+ L ++ DFG +K L SS F GT Y+APEL + ++K D+
Sbjct: 199 NIFLMPTGIIKLGDFGFSKQYSDSVSLDVASS----FCGTPYYLAPELWERKRYSKKADM 254
Query: 591 YSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVA 650
+S GV+ E++ P F S M L DP P P + + ++L+
Sbjct: 255 WSLGVILYELLTLHRP--FKG--PSQREIMQQVLYGKYDP-FPCP---VSSGMKALLDP- 305
Query: 651 LLCLEESPESRPTMQTVCQ 669
L ++P RPT Q +
Sbjct: 306 --LLSKNPALRPTTQQLLH 322
|
Length = 478 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 1e-06
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 513 VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGTF 571
+ +AL ++H I++RD+ NVLL E +++DFG+ K + G + T F GT
Sbjct: 105 ITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTST-FCGTP 160
Query: 572 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
Y+APE+ M D ++ GVL E++ G P
Sbjct: 161 DYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAP 195
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 1e-06
Identities = 52/192 (27%), Positives = 89/192 (46%), Gaps = 20/192 (10%)
Query: 422 ELPSGEVVAVKKFHSLLLSEISVQRE----FLNEIKALTEIRHRNIVKF-YGFCSHPRHS 476
E +G+ A+K +L E+ + ++ L E + L RH + Y F +H R
Sbjct: 16 EKATGKYYAMK----ILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLC 71
Query: 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKS-VANALSYMHHDCFPPIVHRDISS 535
F V E G L LS + E R + + +AL Y+H +V+RD+
Sbjct: 72 F-VMEYANGGELFFHLSRERVFSE----DRARFYGAEIVSALGYLHSC---DVVYRDLKL 123
Query: 536 KNVLLSSEYEARVSDFGIAKF-LKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFG 594
+N++L + +++DFG+ K + G++ T F GT Y+APE+ D + G
Sbjct: 124 ENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLG 182
Query: 595 VLALEVIKGKHP 606
V+ E++ G+ P
Sbjct: 183 VVMYEMMCGRLP 194
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 1e-06
Identities = 48/199 (24%), Positives = 88/199 (44%), Gaps = 12/199 (6%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
+G G SV + +G VAVKK S I +R + E++ L ++H N++
Sbjct: 25 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGLLD 83
Query: 469 FCSHPRHSFLVYE--CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFP 526
+ P S + L + L+N ++ + +I + L Y+H
Sbjct: 84 VFT-PARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS---A 139
Query: 527 PIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT-MKVT 585
I+HRD+ N+ ++ + E ++ DFG+A+ T + T Y APE+ M
Sbjct: 140 DIIHRDLKPSNLAVNEDCELKILDFGLARHT---DDEMTGYVATRWYRAPEIMLNWMHYN 196
Query: 586 EKCDVYSFGVLALEVIKGK 604
+ D++S G + E++ G+
Sbjct: 197 QTVDIWSVGCIMAELLTGR 215
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 2e-06
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 510 IKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAG 569
+A+AL Y+H IV+RD+ +N+LL S+ ++DFG+ K S T F G
Sbjct: 102 AAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCG 158
Query: 570 TFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
T Y+APE+ D + G + E++ G P
Sbjct: 159 TPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPP 195
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 2e-06
Identities = 53/212 (25%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 403 NFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
++ + IG G +V++ + E+VA+K+ L + V L EI L E++H+
Sbjct: 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRV-RLDDDDEGVPSSALREICLLKELKHK 59
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVAN----AL 517
NIV+ Y + LV+E ++ S +G I ++KS L
Sbjct: 60 NIVRLYDVLHSDKKLTLVFEYCDQDLKKYFDSCNGDIDP-------EIVKSFMFQLLKGL 112
Query: 518 SYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGTFGYVA 575
++ H H+ ++HRD+ +N+L++ E +++DFG+A+ F P E T Y
Sbjct: 113 AFCHSHN----VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRP 167
Query: 576 PELAYTMKV-TEKCDVYSFGVLALEVIKGKHP 606
P++ + K+ + D++S G + E+ P
Sbjct: 168 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 199
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 2e-06
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 13/134 (9%)
Query: 517 LSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA---KFLKPGSSNWTEFAGTFGY 573
L +MH+ +V+RD+ N+LL R+SD G+A KP +S GT GY
Sbjct: 110 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGY 161
Query: 574 VAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP-RDFISLLSSSSSNMNLSLNEILDPR 631
+APE L + D +S G + ++++G P R + M L++ L
Sbjct: 162 MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDS 221
Query: 632 LPLPSRNIQDKLIS 645
R++ + L+
Sbjct: 222 FSPELRSLLEGLLQ 235
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 2e-06
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGTFGYV 574
L Y+H + IV+RD+ N+LL +E +++DFG+ K + G T F GT ++
Sbjct: 113 GLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTST-FCGTPEFL 168
Query: 575 APELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
APE+ T D + GVL E++ G+ P
Sbjct: 169 APEVLTETSYTRAVDWWGLGVLIYEMLVGESP 200
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 2e-06
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 449 LNEIKALTEIRHRNIVKF-YGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRT 507
+ E + L RH + Y F +H R F V E G L LS + E R
Sbjct: 43 VTESRVLQNTRHPFLTALKYAFQTHDRLCF-VMEYANGGELFFHLSRERVFTE----ERA 97
Query: 508 NVIKS-VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE 566
+ + +AL Y+H +V+RDI +N++L + +++DFG+ K +
Sbjct: 98 RFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 154
Query: 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
F GT Y+APE+ D + GV+ E++ G+ P
Sbjct: 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 194
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 50.0 bits (119), Expect = 2e-06
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 5/132 (3%)
Query: 513 VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFG 572
+A+AL Y+H IV+RD+ +N+LL S+ ++DFG+ K + + F GT
Sbjct: 105 IASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCGTPE 161
Query: 573 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRL 632
Y+APE+ + D + G + E++ G P F S ++ + L+ L P +
Sbjct: 162 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP--FYSRNTAEMYDNILNKPLQLKPNI 219
Query: 633 PLPSRNIQDKLI 644
+R++ + L+
Sbjct: 220 TNSARHLLEGLL 231
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 49.4 bits (118), Expect = 3e-06
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 513 VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFG 572
+A+AL Y+H I++RD+ +N+LL S+ ++DFG+ K S + F GT
Sbjct: 105 IASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPE 161
Query: 573 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
Y+APE+ D + G + E++ G P
Sbjct: 162 YLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPP 195
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 49.7 bits (118), Expect = 3e-06
Identities = 46/193 (23%), Positives = 94/193 (48%), Gaps = 24/193 (12%)
Query: 429 VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS-------FLVYE 481
VA+KK ++ +R + E+ + + H+NI+ + P+ S +LV E
Sbjct: 45 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFT-PQKSLEEFQDVYLVME 102
Query: 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS 541
++ +L +++ + + S++ + + + ++H I+HRD+ N+++
Sbjct: 103 LMD-ANLCQVIQMELDHERMSYL-----LYQMLCGIKHLHS---AGIIHRDLKPSNIVVK 153
Query: 542 SEYEARVSDFGIAKFLKPGSS-NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEV 600
S+ ++ DFG+A+ G+S T + T Y APE+ M E D++S G + E+
Sbjct: 154 SDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 211
Query: 601 IKGK--HP-RDFI 610
++ K P RD+I
Sbjct: 212 VRHKILFPGRDYI 224
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 5e-06
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 203 TLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNL-ESLEKL 261
T N +V ++LS + + +L + ++LS+N L G IP I SL L
Sbjct: 64 TCNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYL 123
Query: 262 NVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGF 302
N+S+NN +G IP + L +D+S N L G IPN G
Sbjct: 124 NLSNNNFTGSIPRGS--IPNLETLDLSNNMLSGEIPNDIGS 162
|
Length = 968 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 5e-06
Identities = 25/79 (31%), Positives = 40/79 (50%)
Query: 528 IVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEK 587
+++RD+ +N+LL + + DFG+ K F GT Y+APEL T+
Sbjct: 114 VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKA 173
Query: 588 CDVYSFGVLALEVIKGKHP 606
D ++ GVL E++ G P
Sbjct: 174 VDWWTLGVLLYEMLTGLPP 192
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 5e-06
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGTFGYV 574
AL ++H I++RDI +N+LL S ++DFG++K F + F GT Y+
Sbjct: 117 ALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYM 173
Query: 575 APELAYTMKV--TEKCDVYSFGVLALEVIKGKHP 606
AP++ + D +S GVL E++ G P
Sbjct: 174 APDIVRGGDGGHDKAVDWWSMGVLMYELLTGASP 207
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Score = 48.9 bits (116), Expect = 5e-06
Identities = 64/279 (22%), Positives = 114/279 (40%), Gaps = 58/279 (20%)
Query: 403 NFDAEQCIGIG--GQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKA----LT 456
+F++ + IG G G+ + + + +G + A+K +L +++E + I+A L
Sbjct: 2 DFESLKVIGRGAFGEVRLVQKK-DTGHIYAMK----ILRKADMLEKEQVAHIRAERDILV 56
Query: 457 EIRHRNIVK-FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVAN 515
E +VK FY F R+ +L+ E L G + +L ++ E + I
Sbjct: 57 EADGAWVVKMFYSF-QDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEA---TQFYIAETVL 112
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEF-------- 567
A+ +H F +HRDI N+LL ++ ++SDFG+ LK ++ TEF
Sbjct: 113 AIDAIHQLGF---IHRDIKPDNLLLDAKGHVKLSDFGLCTGLK--KAHRTEFYRNLTHNP 167
Query: 568 -----------------------------AGTFGYVAPELAYTMKVTEKCDVYSFGVLAL 598
GT Y+APE+ + CD +S GV+
Sbjct: 168 PSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMY 227
Query: 599 EVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637
E++ G P + + MN + P +P+ +
Sbjct: 228 EMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEK 266
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 6e-06
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 20/221 (9%)
Query: 389 EGKIVYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEV--VAVKKFH-SLLLSEISVQ 445
+ K+ YE+ F+ + +G G V + + VA+K+F S ++ + V
Sbjct: 24 KNKMKYED-------FNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVD 76
Query: 446 REFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIV 505
F +E K L I H V YG + +LV E + G L + K F V
Sbjct: 77 HVF-SERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRN---KRFPNDV 132
Query: 506 RTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565
+ Y+ IV+RD+ +N+LL + +++DFG AK + + +T
Sbjct: 133 GCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD--TRTYT 187
Query: 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
GT Y+APE+ + + D ++ G+ E++ G P
Sbjct: 188 -LCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPP 227
|
Length = 340 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 48.2 bits (115), Expect = 6e-06
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 25/194 (12%)
Query: 430 AVKKF--HSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGS 487
A+KK +L+L +Q+ F+ E LT + +V + RH +V E +E G
Sbjct: 30 AMKKINKQNLILRN-QIQQVFV-ERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGD 87
Query: 488 LAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEAR 547
A +L N G++ + R ++V AL Y+H+ IVHRD+ N+L++S +
Sbjct: 88 CATLLKNIGALP--VDMARMYFAETVL-ALEYLHN---YGIVHRDLKPDNLLITSMGHIK 141
Query: 548 VSDFGIAKF-LKPGSSNWTE--------------FAGTFGYVAPELAYTMKVTEKCDVYS 592
++DFG++K L ++N E GT Y+APE+ + D ++
Sbjct: 142 LTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWA 201
Query: 593 FGVLALEVIKGKHP 606
G++ E + G P
Sbjct: 202 MGIILYEFLVGCVP 215
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 6e-06
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 516 ALSYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYV 574
AL ++H +D IV+RD+ +N+LL + + DFG++K + F GT Y+
Sbjct: 108 ALEHLHKYD----IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCGTTEYL 163
Query: 575 APELAYTMK-VTEKCDVYSFGVLALEVIKGKHP 606
APE+ K T+ D +S GVL E+ G P
Sbjct: 164 APEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSP 196
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 7e-06
Identities = 43/184 (23%), Positives = 89/184 (48%), Gaps = 21/184 (11%)
Query: 429 VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS-------FLVYE 481
VA+KK ++ +R + E+ + + H+NI+ + P+ S ++V E
Sbjct: 52 VAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFT-PQKSLEEFQDVYIVME 109
Query: 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS 541
++ +L +++ + + S++ + + + ++H I+HRD+ N+++
Sbjct: 110 LMD-ANLCQVIQMELDHERMSYL-----LYQMLCGIKHLHS---AGIIHRDLKPSNIVVK 160
Query: 542 SEYEARVSDFGIAKFLKPGSS-NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEV 600
S+ ++ DFG+A+ G+S T + T Y APE+ M E D++S G + E+
Sbjct: 161 SDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 601 IKGK 604
IKG
Sbjct: 219 IKGG 222
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 7e-06
Identities = 59/254 (23%), Positives = 95/254 (37%), Gaps = 54/254 (21%)
Query: 402 KNFDAEQCIGIGGQASVY--RGELPSGEVVAVKKFHSLLLSEISVQRE----FLNEIKAL 455
+F+ + IG G V+ R + +G+V A+K L ++R E L
Sbjct: 1 DDFEVIKVIGRGAFGEVWLVR-DKDTGQVYAMKV----LRKSDMIKRNQIAHVRAERDIL 55
Query: 456 TEIRHRNIVK-FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA 514
+ IVK +Y F H +LV E + G L +L E R + + V
Sbjct: 56 ADADSPWIVKLYYSF-QDEEHLYLVMEYMPGGDLMNLLIRKDVFPE-ET-ARFYIAELVL 112
Query: 515 NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK------------------- 555
AL +H F +HRDI N+L+ ++ +++DFG+ K
Sbjct: 113 -ALDSVHKLGF---IHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLL 168
Query: 556 FLKPGSSNWTEF----------AGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 605
F + GT Y+APE+ +CD +S GV+ E++ G
Sbjct: 169 FRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFP 228
Query: 606 PRDFISLLSSSSSN 619
P S +
Sbjct: 229 P------FYSDTLQ 236
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 7e-06
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 27/156 (17%)
Query: 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQRE------FLNEIKALTEIRHRN 462
+G G A+VY+G +G++VA+K EI ++ E + E L +++H N
Sbjct: 13 LGEGSYATVYKGRSKLTGQLVALK--------EIRLEHEEGAPFTAIREASLLKDLKHAN 64
Query: 463 IVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNV---IKSVANALSY 519
IV + + LV+E L+ L + + + G NV + + L+Y
Sbjct: 65 IVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMH-----NVRLFLFQLLRGLAY 118
Query: 520 MHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555
H ++HRD+ +N+L+S E +++DFG+A+
Sbjct: 119 CHQR---RVLHRDLKPQNLLISERGELKLADFGLAR 151
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 48.5 bits (115), Expect = 7e-06
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 511 KSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN-WTEFAG 569
+SV A+ Y+H + I+HRDI ++N+ ++ + + DFG A F ++N + +AG
Sbjct: 189 RSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAG 245
Query: 570 TFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK 604
T APEL D++S G++ E+
Sbjct: 246 TIATNAPELLARDPYGPAVDIWSAGIVLFEMATCH 280
|
Length = 391 |
| >gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 9e-06
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 24/166 (14%)
Query: 513 VANALSYM-HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF 571
VAN + ++ +C VHRD++++NVL+ ++ DFG+A+ + SN+ TF
Sbjct: 248 VANGMEFLASKNC----VHRDLAARNVLICEGKLVKICDFGLARDIMR-DSNYISKGSTF 302
Query: 572 ---GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEI 627
++APE + T DV+SFG+L E+ G P L +NE
Sbjct: 303 LPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYP------------ELPMNEQ 350
Query: 628 LDPRLPLPSRNIQDKLIS--ILEVALLCLEESPESRPTMQTVCQLL 671
+ R + S I E+ C EE E RP + L+
Sbjct: 351 FYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLV 396
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 9e-06
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 15/193 (7%)
Query: 466 FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF 525
Y F ++ ++V E + G L ++SN I E W V AL +H F
Sbjct: 109 HYAF-QDDKYLYMVMEYMPGGDLVNLMSN-YDIPE-KWARF--YTAEVVLALDAIHSMGF 163
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIA-KFLKPGSSNWTEFAGTFGYVAPELAYTMKV 584
+HRD+ N+LL +++DFG K G GT Y++PE+ +
Sbjct: 164 ---IHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGG 220
Query: 585 T----EKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNL--SLNEILDPRLPLPSRN 638
+CD +S GV E++ G P SL+ + S M+ SL D + +++
Sbjct: 221 DGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKD 280
Query: 639 IQDKLISILEVAL 651
+ ++ EV L
Sbjct: 281 LICAFLTDREVRL 293
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 42.9 bits (102), Expect = 1e-05
Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 161 SLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQF 220
+L L L+ N+L+ L L+ LDLS N L+ PE L + L+LS N
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 47.7 bits (113), Expect = 1e-05
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 529 VHRDISSKNVLLSSEYEARVSDFGIAK--FLKPGSSNWTEFAGTFGYVAPELAYTMKVTE 586
+HRD++++N+LLS ++ DFG+A+ + P + ++APE + T
Sbjct: 201 IHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTI 260
Query: 587 KCDVYSFGVLALEV 600
+ DV+SFGVL E+
Sbjct: 261 QSDVWSFGVLLWEI 274
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343 |
| >gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 1e-05
Identities = 56/230 (24%), Positives = 90/230 (39%), Gaps = 34/230 (14%)
Query: 402 KNFDAEQCIGIGGQASVYRGELPSGEVV---AVKKFHSL----LLSEISV-----QREFL 449
K + ++ IG GG VY + S + AV K +L ++ E V + +
Sbjct: 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKI 71
Query: 450 NEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE--CLER--GSLAEILSNDGSIKEFSWIV 505
K + I H I K+YG C + + Y LE+ + EI IK + +
Sbjct: 72 ALWKNIHNIDHLGIPKYYG-CGSFKRCRMYYRFILLEKLVENTKEIFKR---IKCKNKKL 127
Query: 506 RTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPG---- 560
N++K + L Y+H I H DI +N+++ + D+GIA F+ G
Sbjct: 128 IKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIE 184
Query: 561 ----SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
+ GT Y + VT + D+ S G L+ K P
Sbjct: 185 YSKEQKDLHR--GTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLP 232
|
Length = 294 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 1e-05
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 24/205 (11%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG G Q V + +G+ VA+KK + +R + E+ + + H+NI+
Sbjct: 24 IGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAY-RELVLMKLVNHKNIIGLLN 82
Query: 469 FCSHPRHS-------FLVYECLERGSLAEILSNDGSIKEFSWIVRTNV--IKSVANALSY 519
P+ S +LV E L +L +++ D + S+++ + IK + +A
Sbjct: 83 -VFTPQKSLEEFQDVYLVME-LMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSA--- 137
Query: 520 MHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELA 579
I+HRD+ N+++ S+ ++ DFG+A+ S T + T Y APE+
Sbjct: 138 -------GIIHRDLKPSNIVVKSDCTLKILDFGLAR-TAGTSFMMTPYVVTRYYRAPEVI 189
Query: 580 YTMKVTEKCDVYSFGVLALEVIKGK 604
M E D++S G + E+I+G
Sbjct: 190 LGMGYKENVDIWSVGCIMGEMIRGT 214
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Score = 47.4 bits (112), Expect = 1e-05
Identities = 66/280 (23%), Positives = 113/280 (40%), Gaps = 58/280 (20%)
Query: 402 KNFDAEQCIGIG--GQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKA----L 455
++F++ + IG G G+ + + + +G V A+K +L +++E + I+A L
Sbjct: 1 EDFESLKVIGRGAFGEVRLVQKK-DTGHVYAMK----ILRKADMLEKEQVGHIRAERDIL 55
Query: 456 TEIRHRNIVK-FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA 514
E +VK FY F + +L+ E L G + +L ++ E I
Sbjct: 56 VEADSLWVVKMFYSF-QDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEE---TQFYIAETV 111
Query: 515 NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEF------- 567
A+ +H F +HRDI N+LL S+ ++SDFG+ LK ++ TEF
Sbjct: 112 LAIDSIHQLGF---IHRDIKPDNLLLDSKGHVKLSDFGLCTGLK--KAHRTEFYRNLNHS 166
Query: 568 ------------------------------AGTFGYVAPELAYTMKVTEKCDVYSFGVLA 597
GT Y+APE+ + CD +S GV+
Sbjct: 167 LPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIM 226
Query: 598 LEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637
E++ G P + + MN I P +P+ +
Sbjct: 227 YEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEK 266
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 2e-05
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA---KFLKPGSSNWTEFAGTFG 572
L +MH+ +V+RD+ N+LL R+SD G+A KP +S GT G
Sbjct: 109 GLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHG 160
Query: 573 YVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
Y+APE L D +S G + ++++G P
Sbjct: 161 YMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSP 195
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 2e-05
Identities = 49/223 (21%), Positives = 86/223 (38%), Gaps = 40/223 (17%)
Query: 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQRE---FLNEIKALTEIRHRNIVKF 466
+G G SV G+L + +K + +I E FL+E + + H N++K
Sbjct: 7 LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKL 66
Query: 467 YGFCSHPR--------------------HSFLVYECLERGSLAEILSNDGSIKEFSWIVR 506
G C HSFL+Y L ++
Sbjct: 67 IGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLP-----------EKLPLQTL 115
Query: 507 TNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE 566
+ +A + Y+ + F +HRD++++N +L + V+DFG++K + G
Sbjct: 116 LKFMVDIALGMEYLSNRNF---IHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQG 172
Query: 567 FAGTF--GYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHP 606
++A E T K DV++FGV E+ +G+ P
Sbjct: 173 RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTP 215
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 2e-05
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFY- 467
+G G V+ + + VAVKK ++L++ + L EIK + + H NIVK Y
Sbjct: 13 LGCGSNGLVFSAVDSDCDKRVAVKK---IVLTDPQSVKHALREIKIIRRLDHDNIVKVYE 69
Query: 468 -------------GFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA 514
G + ++V E +E LA +L +E + + +++
Sbjct: 70 VLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLR--- 125
Query: 515 NALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFGIAKFLKPGSSN---WTEFAGT 570
L Y+H ++HRD+ NV +++E ++ DFG+A+ + P S+ +E T
Sbjct: 126 -GLKYIHS---ANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVT 181
Query: 571 FGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGK 604
Y +P L + T+ D+++ G + E++ GK
Sbjct: 182 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 216
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 47.4 bits (112), Expect = 2e-05
Identities = 58/243 (23%), Positives = 114/243 (46%), Gaps = 46/243 (18%)
Query: 451 EIKALTEIRHRNIVKFYG-FCSHPRHS-FLVYECLERGSLAEILSND----GSIKEFSWI 504
E+ + E++H+NIV++ F + +++ E + G L+ + G I+E + +
Sbjct: 62 EVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIV 121
Query: 505 VRTNVIKSVANALSYMHHDCFPP----IVHRDISSKNVLLSSEYE--------------- 545
++ + + +AL+Y H+ P ++HRD+ +N+ LS+
Sbjct: 122 ---DITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGR 178
Query: 546 --ARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAY--TMKVTEKCDVYSFGVLALEVI 601
A++ DFG++K + S + GT Y +PEL T +K D+++ G + E+
Sbjct: 179 PIAKIGDFGLSKNIGIESMAHS-CVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELC 237
Query: 602 KGKHPRDFISLLSSSSSNMNLSLNEI-LDPRLPLPSRNIQDKLISILEVALLCLEESPES 660
GK P ++N + ++E+ P LP+ ++ K ++IL LL L S +
Sbjct: 238 SGKTP-------FHKANNFSQLISELKRGPDLPIKGKS---KELNILIKNLLNL--SAKE 285
Query: 661 RPT 663
RP+
Sbjct: 286 RPS 288
|
Length = 1021 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 46.5 bits (110), Expect = 2e-05
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 513 VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFG 572
VA+A+ Y+H I++RD+ +N+LL S+ ++DFG+ K + F GT
Sbjct: 105 VASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCGTPE 161
Query: 573 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
Y+APE+ D + G + E++ G P
Sbjct: 162 YLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPP 195
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 2e-05
Identities = 63/260 (24%), Positives = 113/260 (43%), Gaps = 29/260 (11%)
Query: 425 SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS------FL 478
S + VAVK + + S ++ EFL E + E H N++K G R +
Sbjct: 26 SFQKVAVKMLKADIFSSSDIE-EFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMV 84
Query: 479 VYECLERGSLAEIL--SNDGSIKEFSWIVRTNV--IKSVANALSYMHHDCFPPIVHRDIS 534
+ ++ G L L S G + F+ ++T V + +A+ + Y+ F +HRD++
Sbjct: 85 ILPFMKHGDLHTFLLMSRIGE-EPFTLPLQTLVRFMIDIASGMEYLSSKNF---IHRDLA 140
Query: 535 SKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF--GYVAPELAYTMKVTEKCDVYS 592
++N +L+ V+DFG++K + G A ++A E T DV++
Sbjct: 141 ARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWA 200
Query: 593 FGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVAL 651
FGV E++ +G+ P + + +S N + N + P D L + E+
Sbjct: 201 FGVTMWEIMTRGQTP--YAGVENSEIYNYLIKGNRLKQP---------PDCLEDVYELMC 249
Query: 652 LCLEESPESRPTMQTVCQLL 671
C P+ RP+ Q + L
Sbjct: 250 QCWSPEPKCRPSFQHLRDQL 269
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273 |
| >gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 3e-05
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 448 FLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRT 507
F + ++ H++IV YG C + +V E +E G L + + W +
Sbjct: 51 FFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPW--KF 108
Query: 508 NVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543
V K +A+ALSY+ +VH ++ +KN+LL+ E
Sbjct: 109 KVAKQLASALSYLEDK---DLVHGNVCTKNILLARE 141
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 4e-05
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 507 TNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE 566
T V + + +A+ Y+H + I+HRDI ++NVL++ + + DFG A F + S
Sbjct: 263 TAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFH 319
Query: 567 F--AGTFGYVAPELAYTMKVTEKCDVYSFGVLALE 599
+ AGT APE+ T D++S G++ E
Sbjct: 320 YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFE 354
|
Length = 461 |
| >gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Score = 45.1 bits (107), Expect = 6e-05
Identities = 66/286 (23%), Positives = 108/286 (37%), Gaps = 70/286 (24%)
Query: 418 VYRGELPSGE-VVAVK--KFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH-P 473
+ E P E V VK K H+ SEI V L E L + H+NI+ C
Sbjct: 26 ILIDEKPGKEEEVFVKTVKDHA---SEIQVTL-LLQESCLLYGLSHQNILPILHVCIEDG 81
Query: 474 RHSFLVYECLERGSLAEILSN--DGSIKEFSWIVRTNVIK---SVANALSYMHHDCFPPI 528
F++Y + G+L L G + ++ +A +SY+H +
Sbjct: 82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GV 138
Query: 529 VHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN-----------WTEFAGTFGYVAPE 577
+H+DI+++N ++ E + +++D +++ L P + W +A E
Sbjct: 139 IHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKW---------MALE 189
Query: 578 LAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP------ 630
+ + DV+SFGVL E++ G+ P +DP
Sbjct: 190 SLVNKEYSSASDVWSFGVLLWELMTLGQTP------------------YVEIDPFEMAAY 231
Query: 631 -----RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
RL P N D+L V C PE RP+ + Q L
Sbjct: 232 LKDGYRLAQPI-NCPDEL---FAVMACCWALDPEERPSFSQLVQCL 273
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 7e-05
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 410 IGIGGQASVYRG-ELPSG-EVVAVKKFHSLLLSE---ISVQREFLNEIKALTEIRHRNIV 464
IG G V++ +L +G VA+K+ E +S RE + ++ L H N+V
Sbjct: 9 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-VAVLRHLETFEHPNVV 67
Query: 465 KFYGFCSHPRHS-----FLVYECLERG--SLAEILSNDGSIKEFSWIVRTNVIKSVA--- 514
+ + C+ R LV+E +++ + + + G V T IK +
Sbjct: 68 RLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPG--------VPTETIKDMMFQL 119
Query: 515 -NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGY 573
L ++H +VHRD+ +N+L++S + +++DFG+A+ + T T Y
Sbjct: 120 LRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL-TSVVVTLWY 175
Query: 574 VAPELAYTMKVTEKCDVYSFGVLALEVIKGK 604
APE+ D++S G + E+ + K
Sbjct: 176 RAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 206
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 8e-05
Identities = 50/217 (23%), Positives = 99/217 (45%), Gaps = 27/217 (12%)
Query: 404 FDAEQC-IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN 462
F+ E C +G G VY+ + G+ + + + + EI L E++H N
Sbjct: 2 FEYEGCKVGRGTYGHVYKAKRKDGK--DDRDYALKQIEGTGISMSACREIALLRELKHPN 59
Query: 463 IVKFYG-FCSHP-RHSFLVYECLERGSLAEIL-------SNDGSIKEFSWIVRTNVIKSV 513
++ F SH R +L+++ E L I+ +N ++ +V++ ++ +
Sbjct: 60 VISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKS-LLYQI 117
Query: 514 ANALSYMHHDCFPPIVHRDISSKNVLLSSEYEAR----VSDFGIAKF----LKPGSSNWT 565
+ + Y+H + ++HRD+ N+L+ E R ++D G A+ LKP ++
Sbjct: 118 LDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP-LADLD 173
Query: 566 EFAGTFGYVAPELAYTMK-VTEKCDVYSFGVLALEVI 601
TF Y APEL + T+ D+++ G + E++
Sbjct: 174 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 210
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 39.8 bits (94), Expect = 1e-04
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 257 SLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNS 299
+L+ L++S+N L+ + F+G+ L +D+S N L + P +
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEA 43
|
Length = 60 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 1e-04
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 27/217 (12%)
Query: 404 FDAEQC-IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN 462
F+ E C +G G VY+ + G+ K++ + + EI L E++H N
Sbjct: 2 FEYEGCKVGRGTYGHVYKAKRKDGK--DEKEYALKQIEGTGISMSACREIALLRELKHPN 59
Query: 463 IVKFYG-FCSHP-RHSFLVYECLERGSLAEIL-------SNDGSIKEFSWIVRTNVIKSV 513
++ F SH R +L+++ E L I+ +N ++ +V++ ++ +
Sbjct: 60 VIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKS-LLYQI 117
Query: 514 ANALSYMHHDCFPPIVHRDISSKNVLLSSEYEAR----VSDFGIAKF----LKPGSSNWT 565
+ + Y+H + ++HRD+ N+L+ E R ++D G A+ LKP ++
Sbjct: 118 LDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP-LADLD 173
Query: 566 EFAGTFGYVAPELAYTMK-VTEKCDVYSFGVLALEVI 601
TF Y APEL + T+ D+++ G + E++
Sbjct: 174 PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 210
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|238064 cd00116, LRR_RI, Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 2e-04
Identities = 58/261 (22%), Positives = 92/261 (35%), Gaps = 40/261 (15%)
Query: 44 NLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGN----ISEVFGIYPNLTFLDISHNN 99
E+ + ++ L L L LE N L ++ P+L L +S N
Sbjct: 6 KGELLKTERATELLPKLLCLQVLR---LEGNTLGEEAAKALASALRPQPSLKELCLS-LN 61
Query: 100 FYGEIWSSWG-------KCQQLGTLNFSMNNITGSIPP------EIGKLYQLHKLDFSLN 146
G I K L L+ S N + L +L + L
Sbjct: 62 ETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLG 121
Query: 147 QIVGEIPIE-LGNLK-SLNYLVLNGNKLSGN----LPRVLGSLSELEYLDLSTNKLSGSI 200
+ + L +L +L LVL N+L G L + L + +L+ L+L+ N + +
Sbjct: 122 DRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAG 181
Query: 201 PETLGNLLKV----HYLNLSNNQFRKE----FPVELEKLVQLSELDLSHNFLGGEIPPQI 252
L LK L+L+NN E L L L L+L N L +
Sbjct: 182 IRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241
Query: 253 CN-----LESLEKLNVSHNNL 268
+ SL L++S N++
Sbjct: 242 ASALLSPNISLLTLSLSCNDI 262
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). Length = 319 |
| >gnl|CDD|178695 PLN03150, PLN03150, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 43.7 bits (103), Expect = 3e-04
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIG 37
N +G+IP S+G T+L+ L L NSLSG VP +G
Sbjct: 476 NSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALG 511
|
Length = 623 |
| >gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 3e-04
Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 31/229 (13%)
Query: 448 FLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRT 507
F ++++ H ++ +G C + +V E +E G L L + +W +
Sbjct: 63 FFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAW--KI 120
Query: 508 NVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK---PGSS-- 562
V + +A+ALSY+ +VH ++ +KN+LL+ A G + F+K PG S
Sbjct: 121 TVAQQLASALSYLEDK---NLVHGNVCAKNILLARLGLAE----GTSPFIKLSDPGVSFT 173
Query: 563 --NWTEFAGTFGYVAPE-LAYTMKVTEKCDVYSFGVLALEV-IKGKHPRDFISLLSSSSS 618
+ E ++APE + ++ D +SFG LE+ G+ P L +
Sbjct: 174 ALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVP------LKERTP 227
Query: 619 NMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTV 667
+ E RLP PS LIS CL P RP+ +T+
Sbjct: 228 SEKERFYE-KKHRLPEPSCKELATLIS------QCLTYEPTQRPSFRTI 269
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 4e-04
Identities = 20/57 (35%), Positives = 25/57 (43%)
Query: 186 LEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHN 242
L+ LDLS N+L+ L + L+LS N P L L LDLS N
Sbjct: 2 LKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGN 58
|
Length = 60 |
| >gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 7e-04
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 41/160 (25%)
Query: 529 VHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT---FGYVAPELAYTMKVT 585
+HRD++++N+LL+ ++ DFG+A+ ++ SN+ ++APE + T
Sbjct: 236 IHRDLAARNILLTHGRITKICDFGLARDIR-NDSNYVVKGNARLPVKWMAPESIFNCVYT 294
Query: 586 EKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLI- 644
+ DV+S+G+L E+ SL SS P +P+ S+ K+I
Sbjct: 295 FESDVWSYGILLWEI---------FSLGSSPY------------PGMPVDSKFY--KMIK 331
Query: 645 -------------SILEVALLCLEESPESRPTMQTVCQLL 671
+ ++ C + P RPT + + QL+
Sbjct: 332 EGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLI 371
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 8e-04
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 510 IKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555
I VA AL Y+H I+HRD+ N+L+S+E +++DFG++K
Sbjct: 110 ISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|227563 COG5238, RNA1, Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification] | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 8e-04
Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 18/109 (16%)
Query: 155 ELGNLKSLNYLVLNGNKLSGNLPRVLG-------SLSELEYLDLSTNKLSGSIPETLGNL 207
EL + L + L+GN + L +L + + D T + + L L
Sbjct: 25 ELEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVML 84
Query: 208 LKV-------HYLNLSNNQFRKEFPVELEKL----VQLSELDLSHNFLG 245
LK ++LS+N F EFP EL L L L L++N LG
Sbjct: 85 LKALLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLG 133
|
Length = 388 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 0.001
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL-----KPGSSNWTEFAGT 570
AL+Y+H I+HRD+ ++N+ L A + DFG A L P W +GT
Sbjct: 197 ALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGW---SGT 250
Query: 571 FGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS 617
+PEL K D++S G++ E+ + SSSS
Sbjct: 251 LETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSS 297
|
Length = 392 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.001
Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 62/233 (26%)
Query: 425 SGEVVAVKKFHSLLLSEISVQREFLNEIKA----LTEIRHRNIVKFYGFCSHPRHSFLVY 480
+G + A+KK L SE+ +++E + ++A L E + +VK Y + +L+
Sbjct: 25 TGHIYAMKK---LRKSEM-LEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80
Query: 481 ECLERGSLAEILSNDGSIKE--FSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNV 538
E L G + +L +K+ F+ I A+ +H + +HRDI N+
Sbjct: 81 EYLPGGDMMTLL-----MKKDTFTEEETRFYIAETILAIDSIHKLGY---IHRDIKPDNL 132
Query: 539 LLSSEYEARVSDFGIAKFLKPGSSNWTEFA------------------------------ 568
LL ++ ++SDFG+ LK S+ TEF
Sbjct: 133 LLDAKGHIKLSDFGLCTGLK--KSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKR 190
Query: 569 ----------GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIS 611
GT Y+APE+ ++CD +S GV+ E++ G P F S
Sbjct: 191 NRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPP--FCS 241
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.001
Identities = 41/160 (25%), Positives = 63/160 (39%), Gaps = 34/160 (21%)
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKE---FSWIVRTNVIKSVANALS 518
N+V + + FLV + E G L +S +I E W V AL
Sbjct: 46 NMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVV------ALD 99
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFG------ 572
+H + IV RD++ N+LL +++ F W+E +
Sbjct: 100 ALHRE---GIVCRDLNPNNILLDDRGHIQLTYFS----------RWSEVEDSCDGEAVEN 146
Query: 573 -YVAPELAYTMKVTEKCDVYSFGVLALEVIKGK-----HP 606
Y APE+ + TE CD +S G + E++ GK HP
Sbjct: 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHP 186
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.002
Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 46/140 (32%)
Query: 510 IKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGI---------AKFLKPG 560
I + A+ +H F +HRDI N+L+ + +++DFG+ +K+ + G
Sbjct: 107 IAELTCAIESVHKMGF---IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKG 163
Query: 561 S-------SNWTEFA---------------------------GTFGYVAPELAYTMKVTE 586
E++ GT Y+APE+ T+
Sbjct: 164 DHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 223
Query: 587 KCDVYSFGVLALEVIKGKHP 606
CD +S GV+ E++ G+ P
Sbjct: 224 LCDWWSVGVILYEMLVGQPP 243
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376 |
| >gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 39.8 bits (93), Expect = 0.002
Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 14/160 (8%)
Query: 408 QCIGIGGQASVYRGEL---PSGEVVAVKKFHSLLL----SEISVQREFLNEIKALTEIRH 460
+ +G G ++Y+G L ++V + S++L S+ F ++++ H
Sbjct: 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSH 60
Query: 461 RNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM 520
+++VK YG C + +V E ++ G L L + + W + +V K +A+AL Y+
Sbjct: 61 KHLVKLYGVCVRDENI-MVEEYVKFGPLDVFLHREKNNVSLHWKL--DVAKQLASALHYL 117
Query: 521 HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560
+VH ++ KN+L+ + Y K PG
Sbjct: 118 EDK---KLVHGNVCGKNILV-ARYGLNEGYVPFIKLSDPG 153
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259 |
| >gnl|CDD|206026 pfam13855, LRR_8, Leucine rich repeat | Back alignment and domain information |
|---|
Score = 36.0 bits (84), Expect = 0.003
Identities = 21/60 (35%), Positives = 26/60 (43%)
Query: 137 QLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKL 196
L LD S N++ L +L L L+GN L+ P L L LDLS N L
Sbjct: 1 NLKSLDLSNNRLTVIPDGAFKGLPNLKVLDLSGNNLTSISPEAFSGLPSLRSLDLSGNNL 60
|
Length = 60 |
| >gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.003
Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 47/125 (37%)
Query: 529 VHRDISSKNVLLSSEYEARVSDFGI---------AKFLKPG----------SSNWTE--- 566
+HRDI N+L+ + +++DFG+ +K+ + G S+ W +
Sbjct: 123 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPAN 182
Query: 567 -------------------------FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI 601
GT Y+APE+ T+ CD +S GV+ E++
Sbjct: 183 CRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 242
Query: 602 KGKHP 606
G+ P
Sbjct: 243 VGQPP 247
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.004
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 39/209 (18%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKK----FHSLLLSEISVQREFLNEIKALTEIR-HRNI 463
IG G + V + +G+ A+K F SL Q L EI+AL + H NI
Sbjct: 7 IGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL------EQVNNLREIQALRRLSPHPNI 60
Query: 464 VKFYGFCSHPRHS--FLVYECLERGSLAEILSN------DGSIKEFSWIVRTNVIKSVAN 515
++ + LV+E ++ +L E++ + +K + + ++KS
Sbjct: 61 LRLIEVLFDRKTGRLALVFELMD-MNLYELIKGRKRPLPEKRVKSYMY----QLLKS--- 112
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK--FLKPGSSNWTEFAGTFGY 573
L +MH + I HRDI +N+L+ + +++DFG + + KP +TE+ T Y
Sbjct: 113 -LDHMHRN---GIFHRDIKPENILIKDD-ILKLADFGSCRGIYSKP---PYTEYISTRWY 164
Query: 574 VAPELAYTMKV-TEKCDVYSFGVLALEVI 601
APE T K D+++ G + E++
Sbjct: 165 RAPECLLTDGYYGPKMDIWAVGCVFFEIL 193
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 673 | |||
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| KOG4194 | 873 | consensus Membrane glycoprotein LIG-1 [Signal tran | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.98 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.98 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.97 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.97 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.97 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.97 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.97 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.97 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.97 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.96 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.96 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.96 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.96 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.96 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.96 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.96 | |
| KOG0444 | 1255 | consensus Cytoskeletal regulator Flightless-I (con | 99.95 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.95 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.94 | |
| KOG0472 | 565 | consensus Leucine-rich repeat protein [Function un | 99.94 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.93 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.93 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.93 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.92 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.92 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.91 | |
| KOG4237 | 498 | consensus Extracellular matrix protein slit, conta | 99.9 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.89 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.88 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.88 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.88 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.87 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.86 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.86 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.86 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.86 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.85 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.85 | |
| PRK15387 | 788 | E3 ubiquitin-protein ligase SspH2; Provisional | 99.85 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.85 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.85 | |
| PLN03210 | 1153 | Resistant to P. syringae 6; Provisional | 99.85 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.84 | |
| PRK15370 | 754 | E3 ubiquitin-protein ligase SlrP; Provisional | 99.83 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.83 | |
| KOG0618 | 1081 | consensus Serine/threonine phosphatase 2C containi | 99.83 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.83 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.83 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.8 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.8 | |
| cd00116 | 319 | LRR_RI Leucine-rich repeats (LRRs), ribonuclease i | 99.79 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.78 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.77 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.75 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.75 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.75 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.74 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.73 | |
| KOG0617 | 264 | consensus Ras suppressor protein (contains leucine | 99.73 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.72 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.71 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.68 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.65 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.63 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.61 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.58 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.5 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.49 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.47 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.45 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.43 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.42 | |
| KOG0532 | 722 | consensus Leucine-rich repeat (LRR) protein, conta | 99.42 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.41 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 99.38 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.38 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 99.37 | |
| COG4886 | 394 | Leucine-rich repeat (LRR) protein [Function unknow | 99.37 | |
| KOG1909 | 382 | consensus Ran GTPase-activating protein [RNA proce | 99.36 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.33 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.32 | |
| KOG3207 | 505 | consensus Beta-tubulin folding cofactor E [Posttra | 99.3 | |
| KOG1259 | 490 | consensus Nischarin, modulator of integrin alpha5 | 99.29 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.27 | |
| cd05146 | 197 | RIO3_euk RIO kinase family; eukaryotic RIO3, catal | 99.26 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.25 | |
| KOG3087 | 229 | consensus Serine/threonine protein kinase [General | 99.24 | |
| COG3642 | 204 | Mn2+-dependent serine/threonine protein kinase [Si | 99.24 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.24 | |
| PLN03150 | 623 | hypothetical protein; Provisional | 99.22 | |
| KOG0531 | 414 | consensus Protein phosphatase 1, regulatory subuni | 99.22 | |
| PF14580 | 175 | LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQ | 99.19 | |
| COG4248 | 637 | Uncharacterized protein with protein kinase and he | 99.18 | |
| cd05154 | 223 | ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an | 99.15 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.11 | |
| PF01163 | 188 | RIO1: RIO1 family; InterPro: IPR018934 Protein pho | 99.03 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 99.0 | |
| KOG4658 | 889 | consensus Apoptotic ATPase [Signal transduction me | 98.97 | |
| PRK15123 | 268 | lipopolysaccharide core heptose(I) kinase RfaP; Pr | 98.96 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.94 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 98.94 | |
| PF13855 | 61 | LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RF | 98.92 | |
| KOG3741 | 655 | consensus Poly(A) ribonuclease subunit [RNA proces | 98.88 | |
| COG0478 | 304 | RIO-like serine/threonine protein kinase fused to | 98.85 | |
| KOG2137 | 700 | consensus Protein kinase [Signal transduction mech | 98.75 | |
| PRK09902 | 216 | hypothetical protein; Provisional | 98.74 | |
| KOG1859 | 1096 | consensus Leucine-rich repeat proteins [General fu | 98.74 | |
| KOG2982 | 418 | consensus Uncharacterized conserved protein [Funct | 98.71 | |
| COG0661 | 517 | AarF Predicted unusual protein kinase [General fun | 98.65 | |
| PF06293 | 206 | Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; | 98.65 | |
| KOG2120 | 419 | consensus SCF ubiquitin ligase, Skp2 component [Po | 98.61 |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-81 Score=737.34 Aligned_cols=643 Identities=32% Similarity=0.530 Sum_probs=462.7
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS 81 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 81 (673)
|++++.+|.++.++++|++|+|++|.+++..|..+.++++|+.|++++|.+.+..|..+..+++|+.|+|++|.+.+..+
T Consensus 270 n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p 349 (968)
T PLN00113 270 NKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIP 349 (968)
T ss_pred CeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCC
Confidence 56777777777777777777777777777777777777777777777777777777777777777777777777776666
Q ss_pred cccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCC--------
Q 005864 82 EVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIP-------- 153 (673)
Q Consensus 82 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~-------- 153 (673)
..+..+++|+.|+|++|++.+..+..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|++++..|
T Consensus 350 ~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~ 429 (968)
T PLN00113 350 KNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPL 429 (968)
T ss_pred hHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCC
Confidence 667777777777777777665555555555555555555555555455555555555555555555444444
Q ss_pred ----------------ccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccC
Q 005864 154 ----------------IELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSN 217 (673)
Q Consensus 154 ----------------~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~ 217 (673)
..+..+++|+.|++++|++.+.+|..+ ..++|+.|++++|.+++..|..+.++++|+.|++++
T Consensus 430 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 508 (968)
T PLN00113 430 VYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSE 508 (968)
T ss_pred CCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcC
Confidence 444445555555555555554444433 346777888888888888888888999999999999
Q ss_pred CcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCC
Q 005864 218 NQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIP 297 (673)
Q Consensus 218 n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~ 297 (673)
|++.+..|..+..+++|+.|+|++|.+++.+|..+..+++|+.|+|++|++++.+|..+..++.|+.|++++|++.+.+|
T Consensus 509 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 509 NKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred CcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccCccccccCCcCCCCCCC--CCcccccccccccccccceeeeehhhhhHHHHHHHHH-hhhheeecccccCCCC
Q 005864 298 NSTGFQYDPIQALRGNRGLCGDVE--GFQSCKAFVSQKHVFENKWFLIIIPILGVFALLFFVI-GIIFGRTKRTSKENKG 374 (673)
Q Consensus 298 ~~~~~~~~~~~~~~~n~~~c~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~-~~~~~~~k~~~~~~~~ 374 (673)
....+.......+.||+.+||... +.+.|... . ....|.++++.++++++++++++ +++++++++..+.++.
T Consensus 589 ~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (968)
T PLN00113 589 STGAFLAINASAVAGNIDLCGGDTTSGLPPCKRV----R-KTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRV 663 (968)
T ss_pred CcchhcccChhhhcCCccccCCccccCCCCCccc----c-ccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 887777777788999999998653 34456421 1 12223333333333333333322 2233232221111111
Q ss_pred CcccCCCcceeeecc----CcccHHHHHHHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHH
Q 005864 375 SCENHRGLLSILTFE----GKIVYEEIIRATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFL 449 (673)
Q Consensus 375 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~ 449 (673)
. ...+......+. ..+.++++. ..|...+.||+|+||.||+|.. .+|+.||||++...... ..
T Consensus 664 ~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-------~~ 731 (968)
T PLN00113 664 E--NEDGTWELQFFDSKVSKSITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-------PS 731 (968)
T ss_pred c--cccccccccccccccchhhhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-------cH
Confidence 1 111111111111 123344443 4577888999999999999976 57999999988643211 12
Q ss_pred HHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 005864 450 NEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIV 529 (673)
Q Consensus 450 ~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iv 529 (673)
.|++.+++++|||||+++|+|.+++..++||||+++|+|.++++. ++|.++.+++.|+|+||+|||..+.++|+
T Consensus 732 ~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~ii 805 (968)
T PLN00113 732 SEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVV 805 (968)
T ss_pred HHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCee
Confidence 468889999999999999999999999999999999999999953 78999999999999999999966566999
Q ss_pred EecCCCCCeEeCCCCceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcc
Q 005864 530 HRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDF 609 (673)
Q Consensus 530 H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 609 (673)
||||||+||+++.++.+++. ||........ ....+++.|+|||++.+..++.++|||||||++|||+||+.||+.
T Consensus 806 H~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~ 880 (968)
T PLN00113 806 VGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADA 880 (968)
T ss_pred cCCCCHHhEEECCCCceEEE-eccccccccC----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCc
Confidence 99999999999999888875 6655433211 223678999999999999999999999999999999999999863
Q ss_pred ccccccc----c--cccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 610 ISLLSSS----S--SNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 610 ~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....... . ..........+++.+............++.+++.+||+.||++||||+||+++|++
T Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~ 950 (968)
T PLN00113 881 EFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLES 950 (968)
T ss_pred ccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHH
Confidence 2111000 0 00011223344554433333344566778999999999999999999999999874
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-53 Score=429.55 Aligned_cols=280 Identities=41% Similarity=0.676 Sum_probs=235.9
Q ss_pred cCcccHHHHHHHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceee
Q 005864 389 EGKIVYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468 (673)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 468 (673)
...+++.|+..||++|...+.||+|+||.||+|..++|+.||||++....... .++|.+|++++.+++|||+|+++|
T Consensus 62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlG 138 (361)
T KOG1187|consen 62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLG 138 (361)
T ss_pred cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEE
Confidence 34589999999999999999999999999999999999999999876543221 456999999999999999999999
Q ss_pred eeecCC-eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceE
Q 005864 469 FCSHPR-HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEAR 547 (673)
Q Consensus 469 ~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 547 (673)
||.+.+ ..++|||||++|+|.++++..... .++|.+|.+||.++|+||+|||+.+.|+|+||||||+|||+|+++++|
T Consensus 139 yC~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 139 YCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EEecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 999988 599999999999999999987543 789999999999999999999999988999999999999999999999
Q ss_pred EecccceeecCCCCCCceec-ccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccc------c-ccc
Q 005864 548 VSDFGIAKFLKPGSSNWTEF-AGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSS------S-SSN 619 (673)
Q Consensus 548 l~Dfg~~~~~~~~~~~~~~~-~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------~-~~~ 619 (673)
|+|||+|+............ .||.+|+|||+...+..+.|+|||||||++.|++||+.|.+....... . ...
T Consensus 218 lsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 218 LSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred ccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 99999996544312222222 899999999999999999999999999999999999998774321100 0 011
Q ss_pred cccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 620 MNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
......+++|+++.............+.+++.+|++.+|.+||+|.||+++|+
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~ 350 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELE 350 (361)
T ss_pred HCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHH
Confidence 12367889999986321111256677999999999999999999999999985
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-49 Score=397.43 Aligned_cols=255 Identities=29% Similarity=0.509 Sum_probs=211.7
Q ss_pred CCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC-eeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR-HSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e 481 (673)
.+...+.+|+|+||+||+|.+.....||||++......... .++|.+|+.+|.+++|||||+++|+|.++. ..++|||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtE 120 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTE 120 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEE
Confidence 34445669999999999999965445999999876555444 789999999999999999999999999887 7999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCC-eEEecCCCCCeEeCCCC-ceEEecccceeecCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPP-IVHRDISSKNVLLSSEY-EARVSDFGIAKFLKP 559 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~~~ 559 (673)
||++|+|.++++.. ....+++..+.++|.|||+||.|||++ + ||||||||+|||++.++ ++||+|||+++....
T Consensus 121 y~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 121 YMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred eCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence 99999999999884 236799999999999999999999999 7 99999999999999997 999999999987754
Q ss_pred CCCCceecccccccccccccc--cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 560 GSSNWTEFAGTFGYVAPELAY--TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
.....+...||+.|||||++. ...|+.|+||||||+++|||+||+.||............ .. -..+...+..
T Consensus 197 ~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v----~~--~~~Rp~~p~~ 270 (362)
T KOG0192|consen 197 SKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAV----VV--GGLRPPIPKE 270 (362)
T ss_pred ccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHH----Hh--cCCCCCCCcc
Confidence 434445578999999999999 668999999999999999999999999865442221111 11 1112222222
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+..+..++.+||+.||++||++.+++..|+
T Consensus 271 ----~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~ 301 (362)
T KOG0192|consen 271 ----CPPHLSSLMERCWLVDPSRRPSFLEIVSRLE 301 (362)
T ss_pred ----CCHHHHHHHHHhCCCCCCcCCCHHHHHHHHH
Confidence 4455889999999999999999999999886
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-49 Score=376.60 Aligned_cols=252 Identities=26% Similarity=0.416 Sum_probs=213.5
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC-eeeEEEe
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR-HSFLVYE 481 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e 481 (673)
.+..+.||+|..|+||+++++ +++.+|+|.+... .++...+++.+|++++++.+||+||.++|.|..++ ...++||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~--~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN--IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc--CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 344578999999999999875 6899999999544 44556889999999999999999999999999988 5999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
||++|||+++++..+ .+++....+|+.+|++||.|||+. ++|+||||||+|||++..|+|||||||.+..+...
T Consensus 159 YMDgGSLd~~~k~~g---~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS- 232 (364)
T KOG0581|consen 159 YMDGGSLDDILKRVG---RIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS- 232 (364)
T ss_pred hcCCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence 999999999998763 488899999999999999999973 29999999999999999999999999999877543
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.....+||..|||||.+.+..|+.++||||||+.++|+.+|+.||... ........+.+..+.+...+..+.. .
T Consensus 233 -~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~---~~~~~~~~~Ll~~Iv~~ppP~lP~~--~ 306 (364)
T KOG0581|consen 233 -IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPP---NPPYLDIFELLCAIVDEPPPRLPEG--E 306 (364)
T ss_pred -hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCc---CCCCCCHHHHHHHHhcCCCCCCCcc--c
Confidence 557789999999999999999999999999999999999999998743 1111223344556666444433222 3
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.++..++..||++||.+||+++|+++
T Consensus 307 fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 307 FSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 5667999999999999999999999975
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-48 Score=392.58 Aligned_cols=250 Identities=28% Similarity=0.470 Sum_probs=224.8
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
..|...+.||+|+|+.+|+++. .+|..||+|++.+.........+...+||++.++++|||||+++++|++.+.+|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5689999999999999999977 789999999998877777777888999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|+|++|+|.++++++ +++++.++..++.||+.|+.|||++ +|+|||||..|+|++++.+|||+|||+|..+..+
T Consensus 98 ELC~~~sL~el~Krr---k~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR---KPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHHhc---CCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCc
Confidence 999999999999854 5699999999999999999999999 9999999999999999999999999999999887
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.+...+.+|||.|.|||++....++..+||||+|||+|-|++|++||+... ..+....+.......|.
T Consensus 172 ~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~--------vkety~~Ik~~~Y~~P~---- 239 (592)
T KOG0575|consen 172 GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT--------VKETYNKIKLNEYSMPS---- 239 (592)
T ss_pred ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch--------HHHHHHHHHhcCccccc----
Confidence 777788999999999999999999999999999999999999999998432 23344445555555543
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.+..++|.++|++||.+|||+++|+.
T Consensus 240 ~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 240 HLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred ccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 33445889999999999999999999985
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-48 Score=375.72 Aligned_cols=255 Identities=26% Similarity=0.366 Sum_probs=218.1
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhH----HHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEIS----VQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
.+.|.+.+.+|+|+||.|-+|.. ++|+.||||++++......+ ......+|+++|+++.|||||++++++..++.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 35678889999999999999954 58999999999875443311 23446799999999999999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC---CceEEeccc
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE---YEARVSDFG 552 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg 552 (673)
.|+|+||++||.|.+.+-..+. +.+.....+++|++.|+.|||++ ||+||||||+|||+..+ ..+||+|||
T Consensus 251 ~YmVlE~v~GGeLfd~vv~nk~---l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVANKY---LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred eEEEEEEecCccHHHHHHhccc---cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccc
Confidence 9999999999999999987653 56677788999999999999999 99999999999999766 679999999
Q ss_pred ceeecCCCCCCceecccccccccccccccCC---cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD 629 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 629 (673)
+|+... ......+.+||+.|.|||++.+.. +..++|+||+||++|-+++|.+||.... ......+++..
T Consensus 325 lAK~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~-------~~~sl~eQI~~ 396 (475)
T KOG0615|consen 325 LAKVSG-EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEY-------TDPSLKEQILK 396 (475)
T ss_pred hhhccc-cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccccc-------CCccHHHHHhc
Confidence 999876 345567789999999999998655 3348899999999999999999997321 11224566778
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 630 PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 630 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+++.+.+..|...+.+..++|.+||..||++|||++|+++
T Consensus 397 G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 397 GRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred CcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 8888888899999999999999999999999999999985
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-47 Score=384.15 Aligned_cols=248 Identities=28% Similarity=0.468 Sum_probs=207.9
Q ss_pred CCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecc
Q 005864 404 FDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
+...+.||+|.||+||.|.+.....||+|.++..... ...|.+|+++|.+++|++||+++|+|..++..+||||||
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~----~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m 283 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS----PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYM 283 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEeccccC----hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEec
Confidence 4456889999999999999988889999998765332 467889999999999999999999999999999999999
Q ss_pred cCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC
Q 005864 484 ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN 563 (673)
Q Consensus 484 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 563 (673)
+.|+|.++|+... ...+...+.+.++.|||+||+||+++ ++|||||.++|||++++..+||+|||+|+....+...
T Consensus 284 ~~GsLl~yLr~~~-~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~ 359 (468)
T KOG0197|consen 284 PKGSLLDYLRTRE-GGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT 359 (468)
T ss_pred ccCcHHHHhhhcC-CCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCcee
Confidence 9999999999732 35688899999999999999999999 9999999999999999999999999999955433322
Q ss_pred c-eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC--CCCCCCcch
Q 005864 564 W-TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP--RLPLPSRNI 639 (673)
Q Consensus 564 ~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 639 (673)
. ....-+..|.|||.+..+.++.|||||||||++|||+| |+.||......+ ..+.++. +++.|..
T Consensus 360 ~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e---------v~~~le~GyRlp~P~~-- 428 (468)
T KOG0197|consen 360 ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE---------VLELLERGYRLPRPEG-- 428 (468)
T ss_pred ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH---------HHHHHhccCcCCCCCC--
Confidence 1 22334578999999999999999999999999999999 999987543221 1122222 4454443
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
++.++++++..||+.+|++|||++.+...|+
T Consensus 429 --CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~ 459 (468)
T KOG0197|consen 429 --CPDEVYELMKSCWHEDPEDRPTFETLREVLE 459 (468)
T ss_pred --CCHHHHHHHHHHhhCCcccCCCHHHHHHHHH
Confidence 4445999999999999999999999888775
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-48 Score=351.49 Aligned_cols=257 Identities=24% Similarity=0.333 Sum_probs=211.3
Q ss_pred CCCccceeccCCcEEEEEE-EeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceee-eeecCCe-eeEE
Q 005864 403 NFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG-FCSHPRH-SFLV 479 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~-~~~~~~~-~~lv 479 (673)
.|++.++||+|.||+||++ ...+|..||.|.++-. ..+....+....|+.+|++++|||||++++ .+.++.. .++|
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~-~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG-MMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh-hccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 4667789999999999999 5578999999999843 334556788999999999999999999998 4544444 8899
Q ss_pred EecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCC-CeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 480 YECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFP-PIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
||||..|+|...++..+ ..+.+++..+++++.|+++||.++|.+... -|+||||||.|||++.+|.||++|||+++.+
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 99999999999997543 235689999999999999999999995432 3789999999999999999999999999998
Q ss_pred CCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 558 KPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
..........+|||.||+||.+...+|+.||||||+||++|||+.-++||.+-+..+ .-..+-...++.-
T Consensus 179 ~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~--------L~~KI~qgd~~~~-- 248 (375)
T KOG0591|consen 179 SSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLS--------LCKKIEQGDYPPL-- 248 (375)
T ss_pred cchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHH--------HHHHHHcCCCCCC--
Confidence 877666778899999999999999999999999999999999999999998543221 1222333333311
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
....++..+.++|..|+..||+.||+...+++.
T Consensus 249 p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~d 281 (375)
T KOG0591|consen 249 PDEHYSTDLRELINMCIAVDPEQRPDTVPYVQD 281 (375)
T ss_pred cHHHhhhHHHHHHHHHccCCcccCCCcchHHHH
Confidence 114566789999999999999999985555443
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-46 Score=358.51 Aligned_cols=201 Identities=31% Similarity=0.553 Sum_probs=181.3
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
..+|...+.||+|+||+||+|+++ ++..||||.+.+... ....++.+..|+.+|+.++|||||++++++..++..++|
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l-~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL-NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc-CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 357888889999999999999875 589999999977543 334567789999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC------CceEEecccc
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE------YEARVSDFGI 553 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~------~~~kl~Dfg~ 553 (673)
||||.||+|.++++..+ .+++..+...+.|+|.||++||++ +||||||||.|||++.. -.+||+|||+
T Consensus 88 MEyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 99999999999999875 488999999999999999999999 99999999999999865 4589999999
Q ss_pred eeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcc
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDF 609 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 609 (673)
|+.+.++ ......+|++-|||||++...+|+.|+|+||.|+|+||+++|+.||+.
T Consensus 162 AR~L~~~-~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a 216 (429)
T KOG0595|consen 162 ARFLQPG-SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA 216 (429)
T ss_pred hhhCCch-hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence 9988743 344668899999999999999999999999999999999999999983
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-46 Score=356.99 Aligned_cols=245 Identities=26% Similarity=0.382 Sum_probs=213.5
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.++||+|+||+||.++.+ +++.+|+|++++....+..+.+...+|..+|.+++||+||++.-.|++.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 467999999999999999999665 5999999999988777777789999999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
+||+.||.|..+|++.+ .+++..+.-++..|+.||.|||++ +||||||||+|||+|.+|+++|+|||+++....
T Consensus 104 ld~~~GGeLf~hL~~eg---~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREG---RFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EeccCCccHHHHHHhcC---CcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 99999999999998764 488999999999999999999999 999999999999999999999999999996655
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
........+||+.|||||++.+.+|+..+|.||+|+++|||++|.+||...+. ....+.+...+.+.++...
T Consensus 178 ~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~--------~~~~~~I~~~k~~~~p~~l 249 (357)
T KOG0598|consen 178 DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV--------KKMYDKILKGKLPLPPGYL 249 (357)
T ss_pred CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH--------HHHHHHHhcCcCCCCCccC
Confidence 55555668999999999999999999999999999999999999999984322 2333444444544333322
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC
Q 005864 640 QDKLISILEVALLCLEESPESRP 662 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rp 662 (673)
..+..+++.+.+..||++|.
T Consensus 250 ---s~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 250 ---SEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred ---CHHHHHHHHHHhccCHHHhc
Confidence 23578899999999999995
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-45 Score=338.65 Aligned_cols=261 Identities=21% Similarity=0.351 Sum_probs=210.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+.|+....+|+|+||.||+.+.+ +|+.||||++.... +++...+-..+|+++|++++|||+|.++.+|...+..++||
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Ese-dd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESE-DDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCC-ccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 35777889999999999999886 59999999997653 34556777899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|||+. ++.+-+.... ...+.....+++.|+++|+.|+|++ +++||||||+||+++.++.+|+||||+|+.+...
T Consensus 81 E~~dh-TvL~eLe~~p--~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p 154 (396)
T KOG0593|consen 81 EYCDH-TVLHELERYP--NGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAP 154 (396)
T ss_pred eecch-HHHHHHHhcc--CCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence 99998 5555555443 3477788999999999999999999 9999999999999999999999999999998877
Q ss_pred CCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccc----------------cc
Q 005864 561 SSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN----------------LS 623 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~----------------~~ 623 (673)
...++..+.|.+|+|||.+.+ .+|++.+||||.||++.||++|.+-|.+.+..++...... ..
T Consensus 155 gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~ 234 (396)
T KOG0593|consen 155 GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPF 234 (396)
T ss_pred cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCc
Confidence 777888999999999999887 7899999999999999999999998876555433221110 00
Q ss_pred cccccCCCCCCC---CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 LNEILDPRLPLP---SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 ~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.-+.-|....+ ....+....-+.++++.|++.||.+|++-+|++.
T Consensus 235 F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 235 FHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 111111111111 1122233456889999999999999999999874
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-46 Score=382.64 Aligned_cols=270 Identities=27% Similarity=0.470 Sum_probs=222.5
Q ss_pred eeeccCcccHHHHHHHhcCC---------CccceeccCCcEEEEEEEeCC----CCEEEEEeeccchhhhhHHHHHHHHH
Q 005864 385 ILTFEGKIVYEEIIRATKNF---------DAEQCIGIGGQASVYRGELPS----GEVVAVKKFHSLLLSEISVQREFLNE 451 (673)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~---------~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e 451 (673)
..++....+||+-.+|...| .+.++||.|.||+||+|+++- ...||||.++... .+..+.+|..|
T Consensus 603 ~k~YiDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy--tekqrrdFL~E 680 (996)
T KOG0196|consen 603 TKTYIDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY--TEKQRRDFLSE 680 (996)
T ss_pred ceeecCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc--cHHHHhhhhhh
Confidence 34444556676665554433 467899999999999998752 3469999998764 34468899999
Q ss_pred HHHHhccCCCcccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEe
Q 005864 452 IKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHR 531 (673)
Q Consensus 452 ~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 531 (673)
+.+|.+++||||+++.|+.......++|+|||++|+|+.+|+.+. .++++.+...++++||.||.||.+. ++|||
T Consensus 681 AsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsdm---~YVHR 755 (996)
T KOG0196|consen 681 ASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSDM---NYVHR 755 (996)
T ss_pred hhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhhc---Cchhh
Confidence 999999999999999999999999999999999999999999875 5699999999999999999999999 99999
Q ss_pred cCCCCCeEeCCCCceEEecccceeecCCCCCC-ceecc--cccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCC
Q 005864 532 DISSKNVLLSSEYEARVSDFGIAKFLKPGSSN-WTEFA--GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPR 607 (673)
Q Consensus 532 dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~--~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~ 607 (673)
||.++|||++.+..+||+|||+++.+.++... ++... -+.+|.|||.+..++++.+|||||||+++||.++ |..||
T Consensus 756 DLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPY 835 (996)
T KOG0196|consen 756 DLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 835 (996)
T ss_pred hhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcc
Confidence 99999999999999999999999988655533 23232 3479999999999999999999999999999996 99998
Q ss_pred ccccccccccccccccccccc-CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 608 DFISLLSSSSSNMNLSLNEIL-DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..... .+.+.++. +-+++.|- +++..+.+|+..||++|-.+||++.|++..|+|
T Consensus 836 WdmSN--------QdVIkaIe~gyRLPpPm----DCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDk 890 (996)
T KOG0196|consen 836 WDMSN--------QDVIKAIEQGYRLPPPM----DCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDK 890 (996)
T ss_pred cccch--------HHHHHHHHhccCCCCCC----CCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHH
Confidence 74322 11222222 22445443 455679999999999999999999999999875
|
|
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-45 Score=386.18 Aligned_cols=255 Identities=24% Similarity=0.406 Sum_probs=210.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
.+....+.||+|+||+||+|+.. +..-||||.++.. .+.+.+++|.+|++++..++|||||+++|+|.+++.
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~--a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK--AENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc--ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 34455678999999999999653 3457999999876 344468999999999999999999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCC-----------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC
Q 005864 476 SFLVYECLERGSLAEILSNDGS-----------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY 544 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 544 (673)
+++|+|||..|+|.++|..... ..+++..+.+.||.|||.||.||.++ .+|||||..+|+|+.++.
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENL 640 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccce
Confidence 9999999999999999976431 22388899999999999999999999 999999999999999999
Q ss_pred ceEEecccceeecCCCCC-Cc-eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccc
Q 005864 545 EARVSDFGIAKFLKPGSS-NW-TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMN 621 (673)
Q Consensus 545 ~~kl~Dfg~~~~~~~~~~-~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~ 621 (673)
.|||+|||+++.+-..+. .. ....-+++|||||.+..++|+++||||||||++||+++ |+.||..... +
T Consensus 641 ~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn--------~ 712 (774)
T KOG1026|consen 641 VVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN--------Q 712 (774)
T ss_pred EEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch--------H
Confidence 999999999986533221 11 12334689999999999999999999999999999998 9999875433 2
Q ss_pred cccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 622 LSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+.+.-+-+.++- ......+.++++|+..||+..|++||+++|+-..|.
T Consensus 713 EVIe~i~~g~lL---~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~ 760 (774)
T KOG1026|consen 713 EVIECIRAGQLL---SCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQ 760 (774)
T ss_pred HHHHHHHcCCcc---cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHH
Confidence 222233333331 233455667999999999999999999999998875
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-44 Score=361.32 Aligned_cols=263 Identities=25% Similarity=0.365 Sum_probs=214.4
Q ss_pred cHHHHHHHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec
Q 005864 393 VYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH 472 (673)
Q Consensus 393 ~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 472 (673)
..+++....+++.+.+.||+|.||+||+|+|. ..||||.+........ ..+.|+.|+.++++-||.||+-+.|||..
T Consensus 383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~-qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPE-QLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred cccccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHH-HHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 33566666677778899999999999999984 3689999987654443 68899999999999999999999999998
Q ss_pred CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 473 PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
+.. .||+.+|+|.+|+.+++-.. ..|+..+.+.||+|||+||.|||.+ +|+|||||+.|||+.+++.|||+|||
T Consensus 460 p~~-AIiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFG 533 (678)
T KOG0193|consen 460 PPL-AIITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFG 533 (678)
T ss_pred Cce-eeeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEeccc
Confidence 877 99999999999999999765 6799999999999999999999999 99999999999999999999999999
Q ss_pred ceeecC--CCCCCceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccc
Q 005864 553 IAKFLK--PGSSNWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEI 627 (673)
Q Consensus 553 ~~~~~~--~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 627 (673)
++..-. .+........|..-|||||++. ..+|+..+||||||+++|||++|..||. .+.. +..+..+
T Consensus 534 Latvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~-------dqIifmV 605 (678)
T KOG0193|consen 534 LATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNR-------DQIIFMV 605 (678)
T ss_pred ceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCCh-------hheEEEe
Confidence 997432 2333445567888999999986 3468999999999999999999999987 2221 1112111
Q ss_pred cCCCCC-CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 628 LDPRLP-LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 628 ~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
-.+.+. .........+.++.+|+..||..++++||.+.+++..|+
T Consensus 606 GrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~ 651 (678)
T KOG0193|consen 606 GRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLE 651 (678)
T ss_pred cccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHH
Confidence 122111 111222345567999999999999999999999999775
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-44 Score=354.74 Aligned_cols=251 Identities=24% Similarity=0.389 Sum_probs=219.5
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 478 (673)
..+|.+++.||.|+|++||+|+. .+++.||||++.+.....+...+.+..|-.+|.++ .||.|++++-.|+++...|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 46789999999999999999965 46999999999877666666677888999999999 89999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|+||+++|+|.+++++.+ .|++..+..++.+|..|++|||+. |||||||||+|||+|+|++++|.|||.|+.+.
T Consensus 152 vLe~A~nGdll~~i~K~G---sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKYG---SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred EEEecCCCcHHHHHHHhC---cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 999999999999999875 489999999999999999999999 99999999999999999999999999999875
Q ss_pred CCCCC-------------ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccc
Q 005864 559 PGSSN-------------WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625 (673)
Q Consensus 559 ~~~~~-------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 625 (673)
+.... ...++||-.|.+||.+.....+..+|+|+||||+|+|+.|++||...+ ....+.
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N--------eyliFq 297 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN--------EYLIFQ 297 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc--------HHHHHH
Confidence 42211 144789999999999999999999999999999999999999997432 233456
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
++++-.+.++.... ..+.+|+.+.|..||.+|+|.+|+.+
T Consensus 298 kI~~l~y~fp~~fp----~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 298 KIQALDYEFPEGFP----EDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HHHHhcccCCCCCC----HHHHHHHHHHHccCccccccHHHHhh
Confidence 66666666665444 45889999999999999999999865
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-43 Score=341.30 Aligned_cols=261 Identities=25% Similarity=0.398 Sum_probs=211.6
Q ss_pred hcCCCccceeccCCcEEEEEEE-eCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.+.|++.+.||.|..++||+|+ .+.++.||||++.-..... ..+.+.+|+..|+.++||||++++..|..++..|+|
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~--~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN--DLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh--hHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence 4679999999999999999995 4678999999997765443 378899999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|+||.+||+.++++..-. ..+++..+..|.+++++||.|||++ |.+|||+|+.|||++++|.|||+|||.+..+..
T Consensus 103 mpfMa~GS~ldIik~~~~-~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYP-DGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred ehhhcCCcHHHHHHHHcc-ccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 999999999999987654 3489999999999999999999999 999999999999999999999999998876643
Q ss_pred CCCCc----eecccccccccccccc--cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 560 GSSNW----TEFAGTFGYVAPELAY--TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 560 ~~~~~----~~~~~~~~y~aPE~~~--~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
..... ....|++.|||||++. -..|+.|+||||||++..|+.+|..||....+....-........... ...
T Consensus 179 ~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~--t~~ 256 (516)
T KOG0582|consen 179 SGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL--TSG 256 (516)
T ss_pred cCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc--ccc
Confidence 32221 4468999999999954 346999999999999999999999999866554321111110000000 001
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.+.......++.+++..||.+||.+|||++++++
T Consensus 257 ~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 257 LDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred CChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 112223344567999999999999999999999874
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-43 Score=348.55 Aligned_cols=261 Identities=26% Similarity=0.382 Sum_probs=209.3
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--CeeeE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHSFL 478 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 478 (673)
+.|+..++||+|.||.||+|+. .+|+.||+|++..... ++.......+||.+|++++||||+++.+...+. ...|+
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~-~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE-KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC-CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 4466678899999999999955 6799999999976543 334567788999999999999999999999876 68999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|||||+. +|.-++...+ -.|++.++..+++|++.||+|||++ +|+|||||.+|||+|.+|.+||+|||+|+++.
T Consensus 196 VFeYMdh-DL~GLl~~p~--vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPG--VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYT 269 (560)
T ss_pred EEecccc-hhhhhhcCCC--cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeecc
Confidence 9999999 9999887754 5699999999999999999999999 99999999999999999999999999999887
Q ss_pred CCCC-CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccc-------cccccccc----
Q 005864 559 PGSS-NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS-------SNMNLSLN---- 625 (673)
Q Consensus 559 ~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-------~~~~~~~~---- 625 (673)
.... ..+..+.|.+|+|||.+.+. .|+.++|+||.|||+.||++|++.|.+-..+++.. ...+..|.
T Consensus 270 ~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kL 349 (560)
T KOG0600|consen 270 PSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKL 349 (560)
T ss_pred CCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccC
Confidence 6544 46778899999999998764 69999999999999999999999987544433211 11111111
Q ss_pred ---cccCCCCCCCC---cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 ---EILDPRLPLPS---RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ---~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.+..+... +.....+....+|+..+|..||.+|.|+.++++
T Consensus 350 P~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 350 PHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 11111111000 111223456889999999999999999999875
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-43 Score=319.70 Aligned_cols=262 Identities=23% Similarity=0.309 Sum_probs=211.7
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|...+.+|+|.||.||+|++ .+|+.||||+++.....+ .......+|++.|+.++|+||+.++++|...+..-+|+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kd-Gi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKD-GINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccccc-CccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 3577889999999999999955 579999999998764332 23456789999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|||+. +|...++... ..++-..+..++.++++|++|||++ .|+||||||.|++++++|.+||+|||+|+.+.+.
T Consensus 81 Efm~t-dLe~vIkd~~--i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 81 EFMPT-DLEVVIKDKN--IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred Eeccc-cHHHHhcccc--cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 99987 9999998764 5688899999999999999999999 9999999999999999999999999999999877
Q ss_pred CCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------ccccccc------
Q 005864 561 SSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLSLNE------ 626 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~~~~------ 626 (673)
.......+.|.+|+|||.+.+. .|+..+||||.|||+.||+.|.+-|.+.+..++.... ....+.+
T Consensus 155 ~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpd 234 (318)
T KOG0659|consen 155 NRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPD 234 (318)
T ss_pred CcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccccc
Confidence 7766666889999999988764 5999999999999999999988877655444331111 1111111
Q ss_pred ccC-CCCCCCC--cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 627 ILD-PRLPLPS--RNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 627 ~~~-~~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
... ...+.+. ......+.+..+++..++..||.+|.|++|++++
T Consensus 235 Y~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 235 YVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred HHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 000 0111111 1233445567999999999999999999999864
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-43 Score=354.27 Aligned_cols=250 Identities=24% Similarity=0.387 Sum_probs=214.7
Q ss_pred hcCCCccceeccCCcEEEEEEE-eCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
...|+....||+|+.|.||.|. ..+++.||||++...... ..+-+.+|+.+|+..+|+|||++++.|...+..|+|
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~---~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP---KKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC---chhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 3567788899999999999994 457899999999764332 356788999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
||||+||+|.|.+... .+++.++..|+.++++||+|||.+ +|+|||||..||+++.+|.+||+|||++..+..
T Consensus 349 MEym~ggsLTDvVt~~----~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~ 421 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKT----RMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISE 421 (550)
T ss_pred EeecCCCchhhhhhcc----cccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeecccc
Confidence 9999999999999875 389999999999999999999999 999999999999999999999999999999887
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
........+||+.|||||++....|++|+||||||++++||+.|++||-....+...+ .+...-.+++. ..
T Consensus 422 ~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAly-----LIa~ng~P~lk----~~ 492 (550)
T KOG0578|consen 422 EQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-----LIATNGTPKLK----NP 492 (550)
T ss_pred ccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHH-----HHhhcCCCCcC----Cc
Confidence 7777888999999999999999999999999999999999999999986433332211 11111122222 33
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+.++.+++.+||..||.+||++.|+++
T Consensus 493 ~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 493 EKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred cccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 455677999999999999999999999986
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=320.79 Aligned_cols=239 Identities=24% Similarity=0.330 Sum_probs=213.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|+..+.+|.|+||.|..++.+ +|..+|+|++.+...-.....+....|..+|+.+.||+++++.+.|.+.+..++||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 46888899999999999999876 58899999998877777777888999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||++||.|.+++++.+ .+++..+..+|.||+.|++|||+. +|++|||||+|||+|.+|.+||.|||+|+.+...
T Consensus 124 eyv~GGElFS~Lrk~~---rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSG---RFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred eccCCccHHHHHHhcC---CCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence 9999999999999875 489999999999999999999999 9999999999999999999999999999987532
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.-..+|||.|+|||.+.+.++..++|.|||||++|||+.|.+||..... ....+.++..+..+|.-...
T Consensus 198 ---T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~--------~~iY~KI~~~~v~fP~~fs~ 266 (355)
T KOG0616|consen 198 ---TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP--------IQIYEKILEGKVKFPSYFSS 266 (355)
T ss_pred ---EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh--------HHHHHHHHhCcccCCcccCH
Confidence 4568999999999999999999999999999999999999999974322 34456677777777654433
Q ss_pred HHHHHHHHHHHHcccCCCCCC
Q 005864 641 DKLISILEVALLCLEESPESR 661 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~R 661 (673)
++.+|+.+.++.|-.+|
T Consensus 267 ----~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 267 ----DAKDLLKKLLQVDLTKR 283 (355)
T ss_pred ----HHHHHHHHHHhhhhHhh
Confidence 48899999999999888
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-43 Score=345.13 Aligned_cols=261 Identities=22% Similarity=0.328 Sum_probs=211.5
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCC-eee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPR-HSF 477 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~-~~~ 477 (673)
.++|.+.+.||.|.||+||+|+- .+|..||||+++...... +.-.-.+|+..|+++. |||||++.+++.+.+ ..+
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~--ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSW--EECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccH--HHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 35688889999999999999954 579999999998754432 2233468999999998 999999999998877 999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+|||||+. +|+++++.++ +.|++..+..|+.||++||+|+|.+ |+.|||+||+|||+.....+||+|||+|+-+
T Consensus 87 fVfE~Md~-NLYqLmK~R~--r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 87 FVFEFMDC-NLYQLMKDRN--RLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred eeHHhhhh-hHHHHHhhcC--CcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccc
Confidence 99999987 9999999873 7899999999999999999999999 9999999999999999889999999999977
Q ss_pred CCCCCCceecccccccccccccc-cCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------cc------c
Q 005864 558 KPGSSNWTEFAGTFGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-------NL------S 623 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-------~~------~ 623 (673)
.. ...++..+.|.+|+|||++. .+.|+.+.|+||+|||++|+.+-++-|.+.+..++..... .. .
T Consensus 161 ~S-kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~ 239 (538)
T KOG0661|consen 161 RS-KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYN 239 (538)
T ss_pred cc-CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHH
Confidence 53 45567889999999999865 6779999999999999999999999887665554322211 11 1
Q ss_pred cccccCCCCCCCC-----cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 624 LNEILDPRLPLPS-----RNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 624 ~~~~~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
+...+.-+++.-. ......+.+..+++.+|++.||.+|||++|+++.
T Consensus 240 La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 240 LASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1112222222111 1122355679999999999999999999999863
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-43 Score=348.81 Aligned_cols=248 Identities=25% Similarity=0.365 Sum_probs=213.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||+|.||.||||+.+ +.+.||+|.+.+.... +.+.+.+.+|++++++++|||||.++++|....+.++|+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~-~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRN-EKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCc-hHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 46788889999999999999665 6889999999776444 345788999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+.| +|..++...+ .++++.+..++.|+..||.|||+. +|.|||+||+||+++.++.+|+||||+|+.+...
T Consensus 81 e~a~g-~L~~il~~d~---~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~ 153 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQDG---KLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN 153 (808)
T ss_pred hhhhh-hHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccC
Confidence 99988 9999998875 488999999999999999999999 9999999999999999999999999999998877
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
....+...|||-|||||...+.+|+..+|.||+|||+||+++|++||...+. ......+.......| .
T Consensus 154 t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si--------~~Lv~~I~~d~v~~p----~ 221 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSI--------TQLVKSILKDPVKPP----S 221 (808)
T ss_pred ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHH--------HHHHHHHhcCCCCCc----c
Confidence 7777888999999999999999999999999999999999999999863211 111222222222222 2
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+..+..++...+.+||.+|-|..+++.
T Consensus 222 ~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 222 TASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred cccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 45566889999999999999999988764
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=340.38 Aligned_cols=251 Identities=26% Similarity=0.401 Sum_probs=200.0
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC--eeeE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR--HSFL 478 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~l 478 (673)
.++...+.||+|+||+||++... +|...|||.+..... ...+.+.+|+.+|.+++|||||+.+|...... .+++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~---~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS---PTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccc---hhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 34667789999999999999765 499999998865411 12677899999999999999999999854444 6889
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-CCceEEecccceeec
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-EYEARVSDFGIAKFL 557 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~ 557 (673)
.|||+++|+|.+++...+. .+++..+..+.+||++||+|||++ +|+||||||+|||++. ++.+||+|||++...
T Consensus 94 ~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKL 168 (313)
T ss_pred eeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcccccc
Confidence 9999999999999998763 589999999999999999999999 9999999999999999 799999999999876
Q ss_pred CCCC---CCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccc-ccccccccccccccccccCCCC
Q 005864 558 KPGS---SNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFI-SLLSSSSSNMNLSLNEILDPRL 632 (673)
Q Consensus 558 ~~~~---~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~ 632 (673)
.... .......||+.|||||++..+ ....++||||+||++.||+||+.||... ... ............
T Consensus 169 ~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~-------~~~~~ig~~~~~ 241 (313)
T KOG0198|consen 169 ESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEA-------EALLLIGREDSL 241 (313)
T ss_pred ccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchH-------HHHHHHhccCCC
Confidence 5311 123457899999999999853 3445999999999999999999998742 110 001111111111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
+ ......+.+..+++.+|+..||++||||+++++.
T Consensus 242 P---~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 242 P---EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred C---CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 1 1122344568899999999999999999999863
|
|
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-42 Score=376.09 Aligned_cols=255 Identities=27% Similarity=0.414 Sum_probs=208.9
Q ss_pred cCCCccceeccCCcEEEEEEEeC--CCC----EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP--SGE----VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~--~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
...+..+.||+|.||.||+|... +|. .||||.+... .+.....+|.+|..+|+.++|||||+++|+|.+...
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~--~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~ 769 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL--SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP 769 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc--CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence 44566788999999999999664 343 4899988765 445568999999999999999999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCC----CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecc
Q 005864 476 SFLVYECLERGSLAEILSNDGS----IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 551 (673)
.++++|||++|+|..+|++.+. ...++....+.++.|||+|+.||+++ ++|||||.++|+|+++...|||+||
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEccc
Confidence 9999999999999999988632 34588899999999999999999999 9999999999999999999999999
Q ss_pred cceeecCCCCC-Cceec-ccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccccccc
Q 005864 552 GIAKFLKPGSS-NWTEF-AGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEIL 628 (673)
Q Consensus 552 g~~~~~~~~~~-~~~~~-~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 628 (673)
|+|+.+-.... ..... .-+..|||||.+..+.+++|+|||||||++||++| |..||......+. ...-.-
T Consensus 847 GlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v-------~~~~~~ 919 (1025)
T KOG1095|consen 847 GLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV-------LLDVLE 919 (1025)
T ss_pred chhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH-------HHHHHh
Confidence 99994432222 11112 23468999999999999999999999999999998 9999874432221 111222
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 629 DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 629 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.++++.|..+. ..+++++..||+.+|++||++..+++.++
T Consensus 920 ggRL~~P~~CP----~~ly~lM~~CW~~~pe~RP~F~~i~~q~~ 959 (1025)
T KOG1095|consen 920 GGRLDPPSYCP----EKLYQLMLQCWKHDPEDRPSFRTIVEQDP 959 (1025)
T ss_pred CCccCCCCCCC----hHHHHHHHHHccCChhhCccHHHHHhhhh
Confidence 34666554443 34889999999999999999999998775
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-42 Score=349.75 Aligned_cols=253 Identities=23% Similarity=0.369 Sum_probs=212.3
Q ss_pred HhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhh-h-hHHHHHHHHHHHHHhccC-CCcccceeeeeecCCe
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLS-E-ISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRH 475 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~-~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~ 475 (673)
..+.|.+.+.||+|.||+|+.|.+ .+|..||+|.+...... . ....+.+.+|+.++++++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 346799999999999999999965 47899999976653221 1 123456678999999998 9999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-CceEEecccce
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFGIA 554 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~ 554 (673)
.++||||+.||+|.+++...+ .+.+..+..+++|++.|++|||++ +|+||||||+|++++.+ +++||+|||++
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g---~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKG---RLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred EEEEEEecCCccHHHHHHHcC---CCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 999999999999999999853 477799999999999999999999 99999999999999999 99999999999
Q ss_pred eecCCCCCCceecccccccccccccccCC-cC-cchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCC
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYTMK-VT-EKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRL 632 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~-~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (673)
..............|++.|+|||++.+.. |+ .++||||+||++|.|++|+.||+.... ......+....+
T Consensus 169 ~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~--------~~l~~ki~~~~~ 240 (370)
T KOG0583|consen 169 AISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV--------PNLYRKIRKGEF 240 (370)
T ss_pred cccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH--------HHHHHHHhcCCc
Confidence 98753445567789999999999999877 75 789999999999999999999985221 122233555555
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..|.... +.++..++.+|+..||.+|+|+.++++
T Consensus 241 ~~p~~~~---S~~~~~Li~~mL~~~P~~R~t~~~i~~ 274 (370)
T KOG0583|consen 241 KIPSYLL---SPEARSLIEKMLVPDPSTRITLLEILE 274 (370)
T ss_pred cCCCCcC---CHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence 5554332 556899999999999999999999983
|
|
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=353.43 Aligned_cols=254 Identities=28% Similarity=0.435 Sum_probs=206.8
Q ss_pred cCCCccceeccCCcEEEEEEEeCC--C--CE-EEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS--G--EV-VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~--~--~~-vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
++....+.||+|+||.||+|++.. + .. ||||..+..........++|.+|+++|+.++|||||+++|++..+.+.
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence 344455899999999999997643 3 23 899998864434456789999999999999999999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++|||+|+||+|.++|++.+. .++..++..++.+.|.||+|||++ +++||||.++|+|++.++.+||+|||+++.
T Consensus 237 ~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred EEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCccccccC
Confidence 999999999999999998753 588999999999999999999999 999999999999999999999999999875
Q ss_pred cCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC--CCC
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP--RLP 633 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 633 (673)
-...........-+..|+|||.+..+.++.++|||||||++||+++ |..||......+ ....+... +.+
T Consensus 312 ~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~--------v~~kI~~~~~r~~ 383 (474)
T KOG0194|consen 312 GSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYE--------VKAKIVKNGYRMP 383 (474)
T ss_pred CcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHH--------HHHHHHhcCccCC
Confidence 3311111112235689999999999999999999999999999998 899987554321 11222111 222
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+. ..+..+..++.+||..+|++||+|.++.+.++
T Consensus 384 ~~~----~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~ 418 (474)
T KOG0194|consen 384 IPS----KTPKELAKVMKQCWKKDPEDRPTMSTIKKKLE 418 (474)
T ss_pred CCC----CCHHHHHHHHHHhccCChhhccCHHHHHHHHH
Confidence 222 33445888899999999999999999999875
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-42 Score=345.71 Aligned_cols=246 Identities=31% Similarity=0.497 Sum_probs=202.9
Q ss_pred ccHHHHHHHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeee
Q 005864 392 IVYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS 471 (673)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 471 (673)
+.|++|.. .+.+|.|+.|.||+|++ .++.||||+++... ..+|+-|++++||||+.+.|+|.
T Consensus 121 iPFe~IsE-------LeWlGSGaQGAVF~Grl-~netVAVKKV~elk----------ETdIKHLRkLkH~NII~FkGVCt 182 (904)
T KOG4721|consen 121 IPFEEISE-------LEWLGSGAQGAVFLGRL-HNETVAVKKVRELK----------ETDIKHLRKLKHPNIITFKGVCT 182 (904)
T ss_pred CCHHHhhh-------hhhhccCcccceeeeec-cCceehhHHHhhhh----------hhhHHHHHhccCcceeeEeeeec
Confidence 45666654 47799999999999999 58899999875431 24789999999999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecc
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 551 (673)
..-.++||||||..|-|+.+|+..+ .+.-.....|..+||.||.|||.+ .|||||||+-|||++.+..|||+||
T Consensus 183 qsPcyCIiMEfCa~GqL~~VLka~~---~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDF 256 (904)
T KOG4721|consen 183 QSPCYCIIMEFCAQGQLYEVLKAGR---PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDF 256 (904)
T ss_pred CCceeEEeeeccccccHHHHHhccC---ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccc
Confidence 9999999999999999999999864 456677888999999999999999 9999999999999999999999999
Q ss_pred cceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
|-++..... ...-.++||..|||||++.+.+.++|+||||||||||||+||..||...+-..... ..... .-.
T Consensus 257 GTS~e~~~~-STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIw----GVGsN--sL~ 329 (904)
T KOG4721|consen 257 GTSKELSDK-STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIW----GVGSN--SLH 329 (904)
T ss_pred cchHhhhhh-hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEE----eccCC--ccc
Confidence 999866443 34456889999999999999999999999999999999999999987543221110 00000 113
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
++.|..+.. .+.-|++.||+..|..||+++|++..|+
T Consensus 330 LpvPstcP~----GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 330 LPVPSTCPD----GFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred ccCcccCch----HHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 444444433 4778899999999999999999998774
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-42 Score=341.60 Aligned_cols=260 Identities=23% Similarity=0.339 Sum_probs=209.0
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
....+++.||+|.||+|.......+..||||.++.... .....+|.+|+++|.+++|||||+++|+|..++..++|+|
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~--~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDAT--KNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccc--hhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 34567889999999999999988889999999987643 3457899999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
||++|+|.+++.++.... .......+|+.|||.||+||.+. ++|||||.++|+|++.++++||+|||+++-+-.+.
T Consensus 616 YmEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HHhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCC
Confidence 999999999998874322 45566778999999999999999 99999999999999999999999999998554333
Q ss_pred CC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh--CCCCCcccccccccccccccccccccCCCCC-CCC
Q 005864 562 SN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GKHPRDFISLLSSSSSNMNLSLNEILDPRLP-LPS 636 (673)
Q Consensus 562 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 636 (673)
.. ....+-+++|||||.+..++++++||||+||+++||+++ ...||......+. .+...++++...+ ...
T Consensus 692 yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v-----ven~~~~~~~~~~~~~l 766 (807)
T KOG1094|consen 692 YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV-----VENAGEFFRDQGRQVVL 766 (807)
T ss_pred ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH-----HHhhhhhcCCCCcceec
Confidence 22 233455789999999999999999999999999999986 8889874432211 1111122221111 000
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+.-++..+++++.+||..|.++||+++++...|-
T Consensus 767 ~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq 802 (807)
T KOG1094|consen 767 SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQ 802 (807)
T ss_pred cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHH
Confidence 111233456889999999999999999999987763
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-42 Score=353.52 Aligned_cols=257 Identities=23% Similarity=0.400 Sum_probs=202.4
Q ss_pred hcCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHP 473 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 473 (673)
.++|++.+.||+|+||.||+|.+ .+++.||||++.... .....+.+.+|+.++..+ +||||++++++|...
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA--TASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc--chHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 46789999999999999999964 235789999987542 223456789999999999 899999999998764
Q ss_pred -CeeeEEEecccCCChHHHHhcCCC-------------------------------------------------------
Q 005864 474 -RHSFLVYECLERGSLAEILSNDGS------------------------------------------------------- 497 (673)
Q Consensus 474 -~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------- 497 (673)
+..++||||+++|+|.+++.....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 457899999999999999975321
Q ss_pred ----CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC--ceeccccc
Q 005864 498 ----IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTF 571 (673)
Q Consensus 498 ----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~ 571 (673)
...+++..+..++.||++||+|||+. +|+||||||+||++++++.+||+|||+++........ .....++.
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~ 240 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPL 240 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCc
Confidence 13478888999999999999999999 9999999999999999999999999999865332221 12234567
Q ss_pred ccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCC-CCCCCcchHHHHHHHHHH
Q 005864 572 GYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPR-LPLPSRNIQDKLISILEV 649 (673)
Q Consensus 572 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l 649 (673)
.|+|||++.+..++.++|||||||++|||++ |..||......+. ......+.. ...+ ...+.++.++
T Consensus 241 ~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~-------~~~~~~~~~~~~~~----~~~~~~l~~l 309 (338)
T cd05102 241 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE-------FCQRLKDGTRMRAP----ENATPEIYRI 309 (338)
T ss_pred cccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH-------HHHHHhcCCCCCCC----CCCCHHHHHH
Confidence 8999999999899999999999999999997 9999874322110 001111111 1111 1233468899
Q ss_pred HHHcccCCCCCCCCHHHHHHHhhC
Q 005864 650 ALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 650 i~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
+.+||+.||++|||+.|+++.|++
T Consensus 310 i~~cl~~dp~~RPs~~el~~~l~~ 333 (338)
T cd05102 310 MLACWQGDPKERPTFSALVEILGD 333 (338)
T ss_pred HHHHccCChhhCcCHHHHHHHHHH
Confidence 999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-42 Score=336.25 Aligned_cols=250 Identities=25% Similarity=0.410 Sum_probs=212.7
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
...|...+.||+|.||.||+|.+ ..++.||+|++.... ......++.+|+.++.+++++||.+++|.+..+...+++
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~--~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~Lwii 89 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE--AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWII 89 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhh--cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHH
Confidence 34577778999999999999965 579999999997653 334578899999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
||||.||++.+.++... .+++..+.-|+.++..|+.|||.+ +.+|||||+.||++..+|.||++|||.+..+..
T Consensus 90 Mey~~gGsv~~lL~~~~---~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~ 163 (467)
T KOG0201|consen 90 MEYCGGGSVLDLLKSGN---ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTN 163 (467)
T ss_pred HHHhcCcchhhhhccCC---CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeec
Confidence 99999999999998764 346777778899999999999999 999999999999999999999999999998877
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.......++||+.|||||++....|+.|+||||||++.+||.+|.+|+....+++... .+ ++-. |+...
T Consensus 164 ~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf---------lI-pk~~-PP~L~ 232 (467)
T KOG0201|consen 164 TVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF---------LI-PKSA-PPRLD 232 (467)
T ss_pred hhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE---------ec-cCCC-CCccc
Confidence 6666678999999999999998899999999999999999999999988655432211 11 1111 11222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+..+.+++..|+++||+.||++.++++
T Consensus 233 ~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 233 GDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred cccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 255567999999999999999999999985
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-42 Score=306.67 Aligned_cols=250 Identities=28% Similarity=0.416 Sum_probs=216.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++++.||+|.||.||.|+.+ ++-.||+|++.+..........++.+|+++-+.++||||++++++|.+....|+++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 57999999999999999999765 67889999998776666666788999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||..+|++...|..... ..+++.....+..|+|.|+.|+|.. +++||||||+|+|++.++..|++|||.+....
T Consensus 102 Eya~~gel~k~L~~~~~-~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-- 175 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGRM-KRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 175 (281)
T ss_pred EecCCchHHHHHHhccc-ccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCCceeecC--
Confidence 99999999999986543 5688899999999999999999999 99999999999999999999999999987543
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.......+||..|.|||...+..++..+|+|++|++.||++.|..||.... ..+...++..-++..|.
T Consensus 176 ~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~--------~~etYkrI~k~~~~~p~---- 243 (281)
T KOG0580|consen 176 SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS--------HSETYKRIRKVDLKFPS---- 243 (281)
T ss_pred CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh--------hHHHHHHHHHccccCCc----
Confidence 455677899999999999999999999999999999999999999998433 22333444444444432
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+....++|.+|+..+|.+|.+..|+++
T Consensus 244 ~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 244 TISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred ccChhHHHHHHHHhccCccccccHHHHhh
Confidence 33445889999999999999999999986
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=338.85 Aligned_cols=251 Identities=22% Similarity=0.295 Sum_probs=210.1
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|+...+||+|+||+||.|+-+ +|..+|+|++++...-...+.+....|-.+|...++|+||+++-.|++.+..|||
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence 468999999999999999999665 6999999999998877788889999999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||++||++..+|...+ .+++..+..++.+++-|+..+|+. |++||||||+|+|+|..|++||+|||++.-...
T Consensus 220 MEylPGGD~mTLL~~~~---~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMRKD---TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEecCCccHHHHHHhcC---cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhhh
Confidence 99999999999998764 588899999999999999999999 999999999999999999999999999853211
Q ss_pred -----------------------CCCC------------------------ceecccccccccccccccCCcCcchhHHH
Q 005864 560 -----------------------GSSN------------------------WTEFAGTFGYVAPELAYTMKVTEKCDVYS 592 (673)
Q Consensus 560 -----------------------~~~~------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s 592 (673)
+... ....+|||.|+|||++.+..|+..+|.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 0000 01245999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCcccccccccccccccccccccCCC--CCCCCcchHHHHHHHHHHHHHcccCCCCCCCC---HHHH
Q 005864 593 FGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR--LPLPSRNIQDKLISILEVALLCLEESPESRPT---MQTV 667 (673)
Q Consensus 593 lG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~v 667 (673)
+|||+|||+.|.+||....+ .+....++.-+ +.+|.+ .....+..++|.+|+. ||++|-- ++||
T Consensus 374 LG~ImyEmLvGyPPF~s~tp--------~~T~rkI~nwr~~l~fP~~--~~~s~eA~DLI~rll~-d~~~RLG~~G~~EI 442 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETP--------QETYRKIVNWRETLKFPEE--VDLSDEAKDLITRLLC-DPENRLGSKGAEEI 442 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCH--------HHHHHHHHHHhhhccCCCc--CcccHHHHHHHHHHhc-CHHHhcCcccHHHH
Confidence 99999999999999984333 23333333333 333332 2333678899999999 9999964 5555
Q ss_pred H
Q 005864 668 C 668 (673)
Q Consensus 668 ~ 668 (673)
.
T Consensus 443 K 443 (550)
T KOG0605|consen 443 K 443 (550)
T ss_pred h
Confidence 3
|
|
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=306.09 Aligned_cols=260 Identities=22% Similarity=0.287 Sum_probs=212.2
Q ss_pred hcCCCccceeccCCcEEEEEEE-eCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-----C
Q 005864 401 TKNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP-----R 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 474 (673)
.++|.+.+.+|+|||+-||.++ ..+++.||+|++.... .+..+...+|++..++++|||++++++++..+ .
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~---~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS---QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc---hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 4679999999999999999996 5678999999987654 33577889999999999999999999998543 3
Q ss_pred eeeEEEecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccc
Q 005864 475 HSFLVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGI 553 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 553 (673)
..|++++|+..|||.+.+.... ....+++.+.+.|+.+|++||.+||+... +++||||||.||++.+++.+++.|||.
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~-~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEP-PYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCC-cccccCCCcceeEecCCCceEEEeccC
Confidence 5899999999999999998654 33478999999999999999999999843 599999999999999999999999999
Q ss_pred eeecCCCCC---------Cceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccc
Q 005864 554 AKFLKPGSS---------NWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN 621 (673)
Q Consensus 554 ~~~~~~~~~---------~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 621 (673)
+....-.-. .+..-..|..|+|||.+. +...++++|||||||++|+|+.|..||+..-. . ..
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~--~----Gg 249 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ--Q----GG 249 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh--c----CC
Confidence 986532111 122345789999999875 45578999999999999999999999985422 1 11
Q ss_pred cccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 622 LSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...-++..+.+.+|.+.. ++..+.+++++|++.||.+||++.+++..++
T Consensus 250 SlaLAv~n~q~s~P~~~~--yse~l~~lik~mlqvdP~qRP~i~~ll~~~d 298 (302)
T KOG2345|consen 250 SLALAVQNAQISIPNSSR--YSEALHQLIKSMLQVDPNQRPTIPELLSKLD 298 (302)
T ss_pred eEEEeeeccccccCCCCC--ccHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 222344455555554332 6778999999999999999999999998875
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-41 Score=344.59 Aligned_cols=244 Identities=21% Similarity=0.241 Sum_probs=201.6
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERG 486 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 486 (673)
+.||+|+||.||+|+.. +|+.||+|+++............+.+|+.++.+++||||+++++++..++..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999764 78999999997654444445667889999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCcee
Q 005864 487 SLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE 566 (673)
Q Consensus 487 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 566 (673)
+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 154 (323)
T cd05571 81 ELFFHLSRER---VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccc
Confidence 9999997653 578899999999999999999999 9999999999999999999999999998754333333445
Q ss_pred cccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHH
Q 005864 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISI 646 (673)
Q Consensus 567 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 646 (673)
..|++.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+. ..+.++
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--------~~~~~~~~~~~~~p~----~~~~~~ 222 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMEEIRFPR----TLSPEA 222 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--------HHHHHHHcCCCCCCC----CCCHHH
Confidence 67999999999999999999999999999999999999998632211 111112222222222 234458
Q ss_pred HHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 647 LEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 647 ~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.+++.+||+.||++|| ++.++++
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 223 KSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 8999999999999999 7888874
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-41 Score=338.71 Aligned_cols=254 Identities=22% Similarity=0.273 Sum_probs=203.7
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.|+..+.||+|+||+||+|.. .+|+.||+|.+.............+.+|+.++..++|+||+++++++.+++..++|+|
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 377789999999999999976 5799999999876543433345568899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGN-PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred ecCCCcHHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 9999999988865432 3588999999999999999999999 99999999999999999999999999998764322
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
......|+..|+|||++.+..++.++|||||||++|||++|+.||........ .......+.......+ ..
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~----~~ 227 (285)
T cd05631 157 -TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK----REEVDRRVKEDQEEYS----EK 227 (285)
T ss_pred -eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh----HHHHHHHhhcccccCC----cc
Confidence 22345789999999999999999999999999999999999999974321100 0000111111111111 22
Q ss_pred HHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPT-----MQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps-----~~~v~~ 669 (673)
.+.++.+++.+||+.||++||+ ++++++
T Consensus 228 ~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 228 FSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 3456889999999999999997 788775
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-41 Score=337.20 Aligned_cols=245 Identities=23% Similarity=0.351 Sum_probs=200.1
Q ss_pred cceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec----CCeeeEEEec
Q 005864 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH----PRHSFLVYEC 482 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~ 482 (673)
...||+|++|.||+|.+ +|+.||||+++..........+.+.+|+.++.+++||||++++|++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36799999999999988 799999999976544444446788999999999999999999999876 3467899999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++|+|.+++... ..+++..+.+++.|++.|++|||+.. +++||||||+||++++++.+||+|||+++.+....
T Consensus 104 ~~~g~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~- 177 (283)
T PHA02988 104 CTRGYLREVLDKE---KDLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP- 177 (283)
T ss_pred CCCCcHHHHHhhC---CCCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhhcccc-
Confidence 9999999999865 35889999999999999999999742 77899999999999999999999999998653321
Q ss_pred Cceeccccccccccccccc--CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccccc--CCCCCCCCcc
Q 005864 563 NWTEFAGTFGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEIL--DPRLPLPSRN 638 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 638 (673)
....++..|+|||.+.+ ..++.++|||||||++|||++|+.||......+ ....+. ..+.+.+.
T Consensus 178 --~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~--------~~~~i~~~~~~~~~~~-- 245 (283)
T PHA02988 178 --FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE--------IYDLIINKNNSLKLPL-- 245 (283)
T ss_pred --ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHhcCCCCCCCC--
Confidence 23457889999999876 678999999999999999999999997432211 111111 11222221
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+.++.+++.+||+.||++|||++|+++.|+
T Consensus 246 --~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~ 277 (283)
T PHA02988 246 --DCPLEIKCIVEACTSHDSIKRPNIKEILYNLS 277 (283)
T ss_pred --cCcHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence 23456899999999999999999999999886
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-40 Score=339.55 Aligned_cols=262 Identities=22% Similarity=0.340 Sum_probs=201.8
Q ss_pred cCCCccceeccCCcEEEEEEEeCC-----------------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCccc
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS-----------------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIV 464 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 464 (673)
++|.+.+.||+|+||.||+|.+.+ +..||+|.+.... ......++.+|+.++.+++||||+
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA--NKNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC--CHHHHHHHHHHHHHHhhcCCCCee
Confidence 568889999999999999997532 3369999987542 233467799999999999999999
Q ss_pred ceeeeeecCCeeeEEEecccCCChHHHHhcCC----------------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 005864 465 KFYGFCSHPRHSFLVYECLERGSLAEILSNDG----------------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPI 528 (673)
Q Consensus 465 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 528 (673)
++++++.+.+..++||||+++|+|.+++.... ....+++..+.+++.|++.||+|||+. +|
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i 159 (304)
T cd05096 83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NF 159 (304)
T ss_pred EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cc
Confidence 99999999999999999999999999986532 113478889999999999999999999 99
Q ss_pred EEecCCCCCeEeCCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh--CC
Q 005864 529 VHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GK 604 (673)
Q Consensus 529 vH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~--g~ 604 (673)
+||||||+||++++++.+||+|||+++........ .....++..|+|||++.++.++.++||||||+++|||++ +.
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 99999999999999999999999999866433221 122345778999999988899999999999999999997 56
Q ss_pred CCCccccccccccccccccccccc-CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 605 HPRDFISLLSSSSSNMNLSLNEIL-DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 605 ~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.||......+..... ........ ......+ ...+..+.+++.+||+.||++|||+.||.+.|++
T Consensus 240 ~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 240 QPYGELTDEQVIENA-GEFFRDQGRQVYLFRP----PPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCcCCHHHHHHHH-HHHhhhccccccccCC----CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 676533221110000 00000000 0000111 1223468999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-41 Score=339.33 Aligned_cols=247 Identities=23% Similarity=0.300 Sum_probs=204.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|... +|+.||+|++...........+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999775 68999999987543333344667889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence 9999999999997653 478889999999999999999999 9999999999999999999999999999865432
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+..
T Consensus 155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~~~~~~~~--- 220 (291)
T cd05612 155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF--------GIYEKILAGKLEFPRH--- 220 (291)
T ss_pred ---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCcCCCcc---
Confidence 22356899999999999888999999999999999999999998743221 1122222333333322
Q ss_pred HHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPT-----MQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps-----~~~v~~ 669 (673)
....+.+++.+||+.||.+||+ ++|+++
T Consensus 221 -~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 221 -LDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred -CCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 2345889999999999999995 888764
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-41 Score=340.81 Aligned_cols=253 Identities=22% Similarity=0.308 Sum_probs=218.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe-eeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH-SFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lv 479 (673)
++|..++++|+|+||.++..+++ +++.|++|.+......+. ..+...+|+.++++++|||||.+.+.|.+++. .+||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~-~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEP-ERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCch-hhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 57889999999999999999775 688999999877655443 35578899999999999999999999999888 8999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|+|++||++.+.+.+.+ ...++++.+..|+.|++.|+.|||++ .|+|||||+.|||++.++.|||+|||+|+.+.+
T Consensus 83 m~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred EeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 99999999999998875 46799999999999999999999998 999999999999999999999999999999988
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.........||+.|++||.+.+.+|..|+||||+||++|||++-+++|...+. .....++....+.. ..
T Consensus 159 ~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m--------~~Li~ki~~~~~~P---lp 227 (426)
T KOG0589|consen 159 EDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM--------SELILKINRGLYSP---LP 227 (426)
T ss_pred chhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch--------HHHHHHHhhccCCC---CC
Confidence 77677889999999999999999999999999999999999999999984322 22233333333221 12
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
..++.++..++..|+..+|..||++.+++.+
T Consensus 228 ~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 228 SMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 3455679999999999999999999999864
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=343.19 Aligned_cols=247 Identities=23% Similarity=0.303 Sum_probs=205.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|++.+.||+|+||.||+|+.. +|+.||+|.+...........+.+.+|+.++.+++||||+++++++..++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56888999999999999999775 68999999987654334445677899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 98 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred cCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 9999999999998653 478888899999999999999999 9999999999999999999999999999876432
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
. ....|++.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+..
T Consensus 172 ~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--------~~~~~i~~~~~~~p~~--- 237 (329)
T PTZ00263 172 T---FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF--------RIYEKILAGRLKFPNW--- 237 (329)
T ss_pred c---ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH--------HHHHHHhcCCcCCCCC---
Confidence 2 2357899999999999999999999999999999999999998643221 1112223333333322
Q ss_pred HHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPT-----MQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps-----~~~v~~ 669 (673)
.+..+.+++.+||+.||.+||+ ++++++
T Consensus 238 -~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 238 -FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred -CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 2335789999999999999997 677763
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-41 Score=341.27 Aligned_cols=249 Identities=23% Similarity=0.362 Sum_probs=216.2
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+-|++++.||.|+.|.|-.|++ .+|+.+|||++.+...-.......+.+|+.+|+-+.||||++++++|.+..++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 3467889999999999999966 579999999998764444455677899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|-|.+++-..+ ++++.++.+.+.||..|+.|+|.. +|+|||+||+|+++|..+++||+|||+|.... +
T Consensus 92 Eyv~gGELFdylv~kG---~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe~-~ 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKG---PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLEV-P 164 (786)
T ss_pred EecCCchhHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeeccc-C
Confidence 9999999999998875 488899999999999999999999 99999999999999999999999999998654 3
Q ss_pred CCCceecccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
+....+.+|++.|.|||++.+.+| +.++||||.|||||.|+||+.||++ .+....+.++..+.+..|.
T Consensus 165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD--------dNir~LLlKV~~G~f~MPs--- 233 (786)
T KOG0588|consen 165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD--------DNIRVLLLKVQRGVFEMPS--- 233 (786)
T ss_pred CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC--------ccHHHHHHHHHcCcccCCC---
Confidence 455567899999999999999998 4699999999999999999999983 2333445555566666653
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.+..+|+.+|+..||++|-|++||.+
T Consensus 234 -~Is~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 234 -NISSEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred -cCCHHHHHHHHHHhccCccccccHHHHhh
Confidence 34456899999999999999999999986
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-41 Score=315.91 Aligned_cols=261 Identities=21% Similarity=0.252 Sum_probs=206.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeee--cCCeeeE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS--HPRHSFL 478 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~l 478 (673)
++|+..+.|++|.||.||+|+++ +++.||+|+++..... ....-.-.+||.++.+++|||||.+..+.. +-+..|+
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek-~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEK-EGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccccc-CCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 45777899999999999999775 7999999999876422 223345678999999999999999998875 3467999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|||||+. +|.+++..-+ .++...++..++.|+++|++|||++ .|+|||||++|++++..|.+||+|||+|+.+.
T Consensus 155 VMe~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred eHHHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhc
Confidence 9999998 9999998765 5688999999999999999999999 99999999999999999999999999999998
Q ss_pred CCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccccccccCC
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLSLNEILDP 630 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~~~~~~~~ 630 (673)
......+..+.|.+|+|||.+.+. .|+++.|+||+|||+.||+++++-|.+.+..++.... .+..+..+-..
T Consensus 229 sp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~l 308 (419)
T KOG0663|consen 229 SPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSEL 308 (419)
T ss_pred CCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCcccc
Confidence 777778888999999999988765 5899999999999999999999988765444321111 01111100000
Q ss_pred ----CCCC---CCc----chHH--HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 631 ----RLPL---PSR----NIQD--KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 631 ----~~~~---~~~----~~~~--~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+ +.. .... ....-.+++..++..||.+|.|+.|.++
T Consensus 309 p~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 309 PAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred chhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 0000 000 0011 2245778999999999999999999875
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-41 Score=324.44 Aligned_cols=248 Identities=21% Similarity=0.353 Sum_probs=215.6
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|++.+.+|+|.||.|-+|.. ..|+.||||.+++....++...-.+.+|+++|..++||||+.++.+|...+...+||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 4678889999999999999955 789999999999988888888888999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||..+|.|+|++.+++ .+++.++..++.||..|+.|+|.+ +++|||||.+||++|+++++||+|||++..+..
T Consensus 133 EYaS~GeLYDYiSer~---~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~- 205 (668)
T KOG0611|consen 133 EYASGGELYDYISERG---SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYAD- 205 (668)
T ss_pred EecCCccHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhcc-
Confidence 9999999999999875 489999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCceecccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
......++|++-|.+||++.+.+| ++.+|-||+||++|-++.|..||++-+. .....++-.+.+..|.
T Consensus 206 ~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh--------k~lvrQIs~GaYrEP~--- 274 (668)
T KOG0611|consen 206 KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH--------KRLVRQISRGAYREPE--- 274 (668)
T ss_pred ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH--------HHHHHHhhcccccCCC---
Confidence 345567899999999999999988 5789999999999999999999995433 1223333344443332
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+....-+|.+||..+|++|.|+.+|..
T Consensus 275 --~PSdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 275 --TPSDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred --CCchHHHHHHHHHhcCcccchhHHHHhh
Confidence 1223667899999999999999999864
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-42 Score=310.13 Aligned_cols=253 Identities=24% Similarity=0.358 Sum_probs=220.9
Q ss_pred hcCCCccceeccCCcEEEEEE-EeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
++.|++.+.||+|.|+.||+. ..++|+.+|+|++........ ..+++.+|+.+-+.++|||||++.+...+.+..|+|
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 456888899999999999998 456899999998865544332 567889999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC---CceEEecccceee
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE---YEARVSDFGIAKF 556 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~~~ 556 (673)
||+|.|++|..-+-.+ ..+++..+-..++||++|+.|+|.+ +|||||+||+|+++... .-+|++|||+|..
T Consensus 89 Fe~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred EecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEE
Confidence 9999999998766544 4578888889999999999999999 99999999999999543 4599999999998
Q ss_pred cCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCC
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
+. +...+...+|||+|||||++...+|+..+|||+.|||+|-++.|..||... ..+...+.++.+....++
T Consensus 163 l~-~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~--------~~~rlye~I~~g~yd~~~ 233 (355)
T KOG0033|consen 163 VN-DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--------DQHRLYEQIKAGAYDYPS 233 (355)
T ss_pred eC-CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCc--------cHHHHHHHHhccccCCCC
Confidence 87 666778899999999999999999999999999999999999999999742 233445667777777777
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..|....++..+++.+||..||.+|-|+.|.++
T Consensus 234 ~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 234 PEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred cccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 788888899999999999999999999999874
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=340.36 Aligned_cols=241 Identities=23% Similarity=0.291 Sum_probs=198.3
Q ss_pred eccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCCh
Q 005864 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSL 488 (673)
Q Consensus 410 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 488 (673)
||+|+||.||+|... +++.||+|++.............+.+|+.++.+++||||+++++++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999765 5889999998765434444567788999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCceecc
Q 005864 489 AEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA 568 (673)
Q Consensus 489 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 568 (673)
.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.............
T Consensus 81 ~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 154 (312)
T cd05585 81 FHHLQREG---RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFC 154 (312)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCcccccc
Confidence 99997653 478899999999999999999999 999999999999999999999999999976433333334567
Q ss_pred cccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHH
Q 005864 569 GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILE 648 (673)
Q Consensus 569 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 648 (673)
||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+. ..+.++.+
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~--------~~~~~~~~~~~~~~~----~~~~~~~~ 222 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN--------EMYRKILQEPLRFPD----GFDRDAKD 222 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH--------HHHHHHHcCCCCCCC----cCCHHHHH
Confidence 899999999999999999999999999999999999998743221 111222222222222 23346889
Q ss_pred HHHHcccCCCCCCCC---HHHHH
Q 005864 649 VALLCLEESPESRPT---MQTVC 668 (673)
Q Consensus 649 li~~cl~~dp~~Rps---~~~v~ 668 (673)
++.+||+.||++||+ +.|++
T Consensus 223 li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 223 LLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred HHHHHcCCCHHHcCCCCCHHHHH
Confidence 999999999999985 55554
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-40 Score=339.55 Aligned_cols=244 Identities=21% Similarity=0.244 Sum_probs=200.5
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERG 486 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 486 (673)
+.||+|+||.||+++.. +|+.||+|.+.............+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999764 69999999997654444445667888999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCcee
Q 005864 487 SLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE 566 (673)
Q Consensus 487 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 566 (673)
+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++............
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 154 (323)
T cd05595 81 ELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCcccc
Confidence 9999987653 578999999999999999999999 9999999999999999999999999998754333333344
Q ss_pred cccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHH
Q 005864 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISI 646 (673)
Q Consensus 567 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 646 (673)
..|++.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+. ..+.++
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~--------~~~~~~~~~~~~~p~----~~~~~~ 222 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------RLFELILMEEIRFPR----TLSPEA 222 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHhcCCCCCCC----CCCHHH
Confidence 67899999999999989999999999999999999999998643221 111122222222222 223458
Q ss_pred HHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 647 LEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 647 ~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.+++.+||+.||++|| ++.++++
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 223 KSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 8999999999999998 8888764
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-41 Score=343.53 Aligned_cols=245 Identities=22% Similarity=0.301 Sum_probs=210.7
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 478 (673)
.++|...++||+|.||+|++|..+ +++.+|||.+++...-..++.+..+.|..++... +||.+++++..|++.++.+.
T Consensus 367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 467999999999999999999776 5889999999998777777788899999999888 59999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
||||+.||++..+.+. ..+++..+.-+|..|+.||.|||++ +||+||||.+||++|.+|.+||+|||+++---
T Consensus 447 vmey~~Ggdm~~~~~~----~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m 519 (694)
T KOG0694|consen 447 VMEYVAGGDLMHHIHT----DVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGM 519 (694)
T ss_pred EEEecCCCcEEEEEec----ccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccC
Confidence 9999999996655543 3599999999999999999999999 99999999999999999999999999998644
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
......+++.||+.|||||++.+..|+.++|.|||||++|||+.|+.||... ..++..+.++..... +
T Consensus 520 ~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd--------dEee~FdsI~~d~~~----y 587 (694)
T KOG0694|consen 520 GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGD--------DEEEVFDSIVNDEVR----Y 587 (694)
T ss_pred CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCC--------CHHHHHHHHhcCCCC----C
Confidence 3344567799999999999999999999999999999999999999999732 223334444433333 3
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTM 664 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~ 664 (673)
+...+.+...++.+++.++|++|.-+
T Consensus 588 P~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 588 PRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCcccHHHHHHHHHHhccCcccccCC
Confidence 34555678899999999999999865
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-40 Score=338.82 Aligned_cols=244 Identities=22% Similarity=0.254 Sum_probs=201.0
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERG 486 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 486 (673)
+.||+|+||.||+++.. +|+.||+|++.............+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999764 68999999997654444455678889999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCcee
Q 005864 487 SLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE 566 (673)
Q Consensus 487 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 566 (673)
+|.+++... ..+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~ 154 (328)
T cd05593 81 ELFFHLSRE---RVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKT 154 (328)
T ss_pred CHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCccccccc
Confidence 999998765 3588899999999999999999999 9999999999999999999999999998754333333345
Q ss_pred cccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHH
Q 005864 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISI 646 (673)
Q Consensus 567 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 646 (673)
..|++.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+. ..+.++
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~--------~~~~~~~~~~~~~p~----~~~~~~ 222 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMEDIKFPR----TLSADA 222 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH--------HHHHHhccCCccCCC----CCCHHH
Confidence 67899999999999889999999999999999999999998643221 111111222222222 223458
Q ss_pred HHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 647 LEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 647 ~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.+++.+||+.||++|| ++.|+++
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 223 KSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred HHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 8999999999999997 8898875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-40 Score=345.15 Aligned_cols=258 Identities=21% Similarity=0.361 Sum_probs=203.1
Q ss_pred hcCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHP 473 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 473 (673)
.++|++.+.||+|+||.||+|.+ .++..||||+++... .....+.+.+|+.++..+ +||||++++++|..+
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc--CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 45688999999999999999963 246689999986542 223456788999999999 899999999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCC--------------------------------------------------------
Q 005864 474 RHSFLVYECLERGSLAEILSNDGS-------------------------------------------------------- 497 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 497 (673)
+..++||||+++|+|.++++....
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 999999999999999999965321
Q ss_pred ----------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 498 ----------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 498 ----------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
...+++..+..++.||+.||+|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDS 268 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCcc
Confidence 12478889999999999999999999 99999999999999999999999999998764332
Q ss_pred CC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 562 SN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 562 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
.. .....++..|+|||.+.+..++.++|||||||++|||++ |..||....... ...+.+........
T Consensus 269 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--------~~~~~~~~~~~~~~-- 338 (375)
T cd05104 269 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--------KFYKMIKEGYRMLS-- 338 (375)
T ss_pred cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--------HHHHHHHhCccCCC--
Confidence 21 112334567999999999999999999999999999998 888986432110 00111111111000
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....+.++.+++.+||+.||++|||++|+++.|++
T Consensus 339 ~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 339 PECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 01123468899999999999999999999999974
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-40 Score=340.34 Aligned_cols=247 Identities=23% Similarity=0.291 Sum_probs=204.0
Q ss_pred cCCCccceeccCCcEEEEEEEeCC--CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS--GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
++|++.+.||+|+||.||+|.... +..||+|++...........+.+.+|+.++..++||||+++++++.+++..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 468899999999999999997543 468999998765443444567788999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 110 ~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999998653 478899999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
. .....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+..
T Consensus 184 ~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--------~~~~~i~~~~~~~p~~-- 250 (340)
T PTZ00426 184 R---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL--------LIYQKILEGIIYFPKF-- 250 (340)
T ss_pred C---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--------HHHHHHhcCCCCCCCC--
Confidence 2 23457899999999999888999999999999999999999999743221 1112222222222222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.+..+.+++.+|++.||++|+ +++++++
T Consensus 251 --~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 251 --LDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred --CCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 223478999999999999995 8988875
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-40 Score=342.16 Aligned_cols=256 Identities=20% Similarity=0.270 Sum_probs=206.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|+.. +|+.||+|++...........+.+..|++++..++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36889999999999999999775 58999999997654444445677899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 9999999999997653 478899999999999999999999 999999999999999999999999999976543
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
......|++.|+|||++.+..++.++||||+||++|||++|+.||......+...... .....+.. +.......
T Consensus 154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~--~~~~~~~~--~~~~~~~~ 227 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLK--YWKETLQR--PVYDDPRF 227 (333)
T ss_pred --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHH--hccccccC--CCCCcccc
Confidence 2344578999999999999899999999999999999999999997433211100000 00000100 00000001
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
..+.++.+++.+||..+|.+||+++|+++.
T Consensus 228 ~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 228 NLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 234568899999999999999999999863
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-40 Score=344.89 Aligned_cols=258 Identities=23% Similarity=0.378 Sum_probs=203.2
Q ss_pred hcCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHP 473 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 473 (673)
.++|++.+.||+|+||.||+|.+ .++..||+|+++..... .....+.+|+.+++.+ +|||||+++++|...
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHT--DEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCH--HHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 45789999999999999999864 23457999998754322 2356788999999999 899999999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCC--------------------------------------------------------
Q 005864 474 RHSFLVYECLERGSLAEILSNDGS-------------------------------------------------------- 497 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 497 (673)
+..++||||+++|+|.+++.....
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 999999999999999999864310
Q ss_pred -----------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC--c
Q 005864 498 -----------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN--W 564 (673)
Q Consensus 498 -----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~ 564 (673)
...+++.++.+++.||+.||+|||+. +++||||||+||++++++.+||+|||+++........ .
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~ 271 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVK 271 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeec
Confidence 12478889999999999999999999 9999999999999999999999999999865433221 1
Q ss_pred eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcchHHHH
Q 005864 565 TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKL 643 (673)
Q Consensus 565 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (673)
....++..|+|||++.+..++.++|||||||++|||++ |+.||....... ............. .....+
T Consensus 272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~--------~~~~~~~~~~~~~--~~~~~~ 341 (374)
T cd05106 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS--------KFYKMVKRGYQMS--RPDFAP 341 (374)
T ss_pred cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH--------HHHHHHHcccCcc--CCCCCC
Confidence 12234568999999998899999999999999999997 999987432111 0111111111110 001123
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 644 ISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 644 ~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.++.+++.+||+.||++|||+.+++++|++
T Consensus 342 ~~l~~li~~cl~~dp~~RPs~~~l~~~l~~ 371 (374)
T cd05106 342 PEIYSIMKMCWNLEPTERPTFSQISQLIQR 371 (374)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 568999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=326.30 Aligned_cols=253 Identities=23% Similarity=0.341 Sum_probs=203.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
++|++.+.||+|+||.||+|.++ .+..||+|.++.... ....+.+.+|+.++.+++||||+++++++..++..+
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS--DKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM 82 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC--HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence 46888999999999999999653 366899999876432 234567999999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++|+|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||.+...
T Consensus 83 lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 83 IVTEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred EEEEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 9999999999999997653 3588999999999999999999999 9999999999999999999999999987653
Q ss_pred CCCCCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCCC
Q 005864 558 KPGSSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLPL 634 (673)
Q Consensus 558 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 634 (673)
...... .....++..|+|||.+.+..++.++|||||||++||+++ |+.||......+ ....+.+. ..+.
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~--------~~~~~~~~~~~~~ 229 (266)
T cd05064 158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD--------VIKAVEDGFRLPA 229 (266)
T ss_pred cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--------HHHHHHCCCCCCC
Confidence 222111 112234578999999999999999999999999999875 999987432211 01111111 1121
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
+ ...+..+.+++.+||+.+|.+||+++|+.+.|++
T Consensus 230 ~----~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~ 264 (266)
T cd05064 230 P----RNCPNLLHQLMLDCWQKERGERPRFSQIHSILSK 264 (266)
T ss_pred C----CCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence 2 2234568899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=335.51 Aligned_cols=247 Identities=23% Similarity=0.301 Sum_probs=197.9
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHH---hccCCCcccceeeeeecCCeeeEE
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKAL---TEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l---~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
|++.+.||+|+||.||+|... +|+.||||+++..........+.+.+|+.++ ..++||||+++++++..++..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 667899999999999999764 6899999999765433333455666666554 567899999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|..+++.. .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 81 ~E~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIHTD----VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 9999999999888653 489999999999999999999999 999999999999999999999999999875433
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.........|++.|+|||.+.+..++.++|||||||++|||++|+.||...... .....+.......+.
T Consensus 154 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~--------~~~~~i~~~~~~~p~--- 222 (324)
T cd05589 154 FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE--------EVFDSIVNDEVRYPR--- 222 (324)
T ss_pred CCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCC---
Confidence 333344567899999999999989999999999999999999999998743221 111122222222222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
..+..+.+++.+||+.||.+|| ++.++++
T Consensus 223 -~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 223 -FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred -CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 2234588999999999999999 5666654
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=334.93 Aligned_cols=244 Identities=23% Similarity=0.333 Sum_probs=199.2
Q ss_pred ceeccCCcEEEEEEEe----CCCCEEEEEeeccchhh-hhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 408 QCIGIGGQASVYRGEL----PSGEVVAVKKFHSLLLS-EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
+.||+|+||.||+++. .+++.||+|.++..... .......+..|+.+++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999965 35889999998764322 223345678899999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++|+|.+++...+ .+.+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 82 LSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred CCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 99999999997653 467788888999999999999999 999999999999999999999999999976543333
Q ss_pred CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHH
Q 005864 563 NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDK 642 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (673)
......|++.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+.. .
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~--------~~~~~~~~~~~~~~~~----~ 223 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK--------KTIDKILKGKLNLPPY----L 223 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCCCCCCC----C
Confidence 334467899999999999888999999999999999999999999743221 1222233333333322 2
Q ss_pred HHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 643 LISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 643 ~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
+.++.+++.+||+.||++|| +++++++
T Consensus 224 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 224 TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred CHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 34588999999999999999 7888764
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-40 Score=337.81 Aligned_cols=244 Identities=21% Similarity=0.249 Sum_probs=200.2
Q ss_pred ceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCC
Q 005864 408 QCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERG 486 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 486 (673)
+.||+|+||.||++.. .+|+.||+|.+.............+..|++++..++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999976 478999999997654444445667888999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 487 SLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH-DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 487 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
+|.+++... ..+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (325)
T cd05594 81 ELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMK 154 (325)
T ss_pred cHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccc
Confidence 999998765 358899999999999999999997 6 999999999999999999999999999876443333334
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...|++.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+.. .+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--------~~~~~i~~~~~~~p~~----~~~~ 222 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMEEIRFPRT----LSPE 222 (325)
T ss_pred cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--------HHHHHHhcCCCCCCCC----CCHH
Confidence 567999999999999989999999999999999999999998643211 1111122222222222 2345
Q ss_pred HHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 646 ILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
+.+++.+||+.||++|+ ++.++++
T Consensus 223 ~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 223 AKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred HHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 88999999999999996 8998875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=328.36 Aligned_cols=249 Identities=23% Similarity=0.268 Sum_probs=199.9
Q ss_pred eccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCCh
Q 005864 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSL 488 (673)
Q Consensus 410 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 488 (673)
||+|+||+||++... +|+.||+|.+...........+.+..|+++++.++||||+++.+++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999764 6899999998765444333456778899999999999999999999999999999999999999
Q ss_pred HHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCceec
Q 005864 489 AEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEF 567 (673)
Q Consensus 489 ~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 567 (673)
.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++.............
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY 157 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence 98885432 234689999999999999999999999 99999999999999999999999999998765544444456
Q ss_pred ccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHH
Q 005864 568 AGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISIL 647 (673)
Q Consensus 568 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 647 (673)
.|++.|+|||++.+..++.++||||||+++|||++|+.||........ .......+....... ....+..+.
T Consensus 158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~----~~~~~~~~~ 229 (280)
T cd05608 158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE----NKELKQRILNDSVTY----PDKFSPASK 229 (280)
T ss_pred CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh----HHHHHHhhcccCCCC----cccCCHHHH
Confidence 789999999999999999999999999999999999999863221100 001111111211121 123445688
Q ss_pred HHHHHcccCCCCCCC-----CHHHHHH
Q 005864 648 EVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 648 ~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
+++.+||+.||++|| +++++++
T Consensus 230 ~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 230 SFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred HHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 999999999999999 6777764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-39 Score=334.56 Aligned_cols=252 Identities=22% Similarity=0.319 Sum_probs=201.8
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||.||+|+.. +++.||+|+++.....+....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999765 6889999999865444444567788999999998 799999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++... ..+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (329)
T cd05588 81 GDLMFHMQRQ---RKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTS 154 (329)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCCCccc
Confidence 9999998765 3588999999999999999999999 999999999999999999999999999875333233334
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-ccccccccCCCCCCCCcchHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-NLSLNEILDPRLPLPSRNIQDKLI 644 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 644 (673)
...||+.|+|||++.+..++.++||||+||++|||++|+.||+............ ......+.......+.. .+.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----~~~ 230 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRS----LSV 230 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCC----CCH
Confidence 5678999999999999999999999999999999999999997433221111111 11112223333333322 234
Q ss_pred HHHHHHHHcccCCCCCCCC------HHHHHH
Q 005864 645 SILEVALLCLEESPESRPT------MQTVCQ 669 (673)
Q Consensus 645 ~l~~li~~cl~~dp~~Rps------~~~v~~ 669 (673)
++.+++.+||+.||.+||+ ++|+++
T Consensus 231 ~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 231 KASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 5889999999999999997 667653
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=324.38 Aligned_cols=261 Identities=21% Similarity=0.321 Sum_probs=210.0
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|+.. +++.||||.+......+......+.+|+++++.++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 47889999999999999999764 78999999876543344455677899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 481 ECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 9999999999886432 124578899999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.........+++.|+|||.+.+..++.++|+||+|+++|||++|+.||...... .......+.....+ ....
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~------~~~~~~~~~~~~~~--~~~~ 230 (267)
T cd08228 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LFSLCQKIEQCDYP--PLPT 230 (267)
T ss_pred hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc------HHHHHHHHhcCCCC--CCCh
Confidence 333334456888999999998888999999999999999999999998532110 00001111111111 1112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+||+.+|++||++.+|++.+++
T Consensus 231 ~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~ 264 (267)
T cd08228 231 EHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQ 264 (267)
T ss_pred hhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHH
Confidence 2345668999999999999999999999998863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=329.63 Aligned_cols=260 Identities=20% Similarity=0.280 Sum_probs=200.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||+|+||+||+|... +++.||+|.++.... ......+.+|+.++++++||||+++++++..++..++||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--EGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--CCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 46889999999999999999765 689999999865421 122456778999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++ +|.+++...+ ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~~-~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~ 156 (288)
T cd07871 83 EYLDS-DLKQYLDNCG--NLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVP 156 (288)
T ss_pred eCCCc-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCC
Confidence 99985 9999987654 3478889999999999999999999 9999999999999999999999999999865443
Q ss_pred CCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccc-------ccccccc---------
Q 005864 561 SSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS-------SSNMNLS--------- 623 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-------~~~~~~~--------- 623 (673)
........+++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+.. .......
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07871 157 TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEE 236 (288)
T ss_pred CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchh
Confidence 333344567899999998865 56899999999999999999999998643221100 0000000
Q ss_pred cccccCCCCCCCC--cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 LNEILDPRLPLPS--RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 ~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+...... ........+..+++.+|+..||.+|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0111111111000 000112346889999999999999999999975
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=333.39 Aligned_cols=239 Identities=23% Similarity=0.317 Sum_probs=196.1
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||+||+|+.+ +++.||+|++...........+.+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999775 6889999998765433344566778888888877 699999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++...+ .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...........
T Consensus 81 g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (320)
T cd05590 81 GDLMFHIQKSR---RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTS 154 (320)
T ss_pred chHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccc
Confidence 99999987653 478899999999999999999999 999999999999999999999999999876533333344
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...|++.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+. ..+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--------~~~~~i~~~~~~~~~----~~~~~ 222 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED--------DLFEAILNDEVVYPT----WLSQD 222 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHhcCCCCCCC----CCCHH
Confidence 567899999999999889999999999999999999999999743221 111222222222222 23345
Q ss_pred HHHHHHHcccCCCCCCCCH
Q 005864 646 ILEVALLCLEESPESRPTM 664 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~ 664 (673)
+.+++.+||+.||++||++
T Consensus 223 ~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 223 AVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred HHHHHHHHcccCHHHCCCC
Confidence 8899999999999999998
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=321.67 Aligned_cols=250 Identities=26% Similarity=0.442 Sum_probs=202.7
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.+|++.+.||+|+||.||+|+++++..+|+|.+..... ..+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e 79 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM----SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTE 79 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc----cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEE
Confidence 45788899999999999999998888999998764322 24578889999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.++++... ..+++..+..++.|++.||+|||+. +++||||+|+||++++++.+|++|||.++......
T Consensus 80 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 80 FMENGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred cCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCc
Confidence 999999999997543 3578999999999999999999999 99999999999999999999999999988653322
Q ss_pred CC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCCCCCcc
Q 005864 562 SN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPSRN 638 (673)
Q Consensus 562 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 638 (673)
.. .....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+. ...+... ....+.
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~--------~~~i~~~~~~~~~~-- 224 (256)
T cd05114 155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEV--------VEMISRGFRLYRPK-- 224 (256)
T ss_pred eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHH--------HHHHHCCCCCCCCC--
Confidence 11 122334568999999988889999999999999999999 8999864322111 1111111 111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+.++.+++.+||+.+|++||+++++++.|.
T Consensus 225 --~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 225 --LASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred --CCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 12346899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-40 Score=326.80 Aligned_cols=248 Identities=35% Similarity=0.535 Sum_probs=192.8
Q ss_pred ccceeccCCcEEEEEEEeC-----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 406 AEQCIGIGGQASVYRGELP-----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 406 ~~~~ig~G~~g~vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
..+.||.|.||.||+|.+. .+..|+||.++.. ......+.+.+|++.+.+++||||++++|++...+..++|+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS--SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT--SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc--cccccceeeeecccccccccccccccccccccccccccccc
Confidence 3578999999999999775 3668999998553 23334788999999999999999999999999888899999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++.... ...+++.++.+|+.||++||+|||+. +++|+||+++||++++++.+||+|||++......
T Consensus 81 e~~~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp E--TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred cccccccccccccccc-cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc
Confidence 9999999999998862 24589999999999999999999999 9999999999999999999999999999876322
Q ss_pred CCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCC-CCCCC
Q 005864 561 SSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPR-LPLPS 636 (673)
Q Consensus 561 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 636 (673)
... .........|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+.+.. .+.+.
T Consensus 157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~--------~~~~~~~~~~~~~~~ 228 (259)
T PF07714_consen 157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEE--------IIEKLKQGQRLPIPD 228 (259)
T ss_dssp SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHH--------HHHHHHTTEETTSBT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------ccccccccccceecc
Confidence 221 122346778999999999899999999999999999999 788876432111 111111111 11111
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L 671 (673)
..+..+.+++..||+.||++|||++++++.|
T Consensus 229 ----~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 229 ----NCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----TSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----chhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 2234588999999999999999999999986
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-40 Score=312.37 Aligned_cols=262 Identities=22% Similarity=0.329 Sum_probs=206.8
Q ss_pred HhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec-----C
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH-----P 473 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~ 473 (673)
....|...+.||+|+||.|+.|.. .+|+.||||++...... ....++..+|+..++.++|+||+.+.+.+.. -
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~-~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFEN-QIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhc-hHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence 345566678999999999999966 47999999998755433 3457788899999999999999999999864 3
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccc
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGI 553 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 553 (673)
+..|+|+|+|+. +|...++... .++...+..++.|+++||.|+|+. +++||||||+|++++.+..+||+|||+
T Consensus 99 ~DvYiV~elMet-DL~~iik~~~---~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 99 NDVYLVFELMET-DLHQIIKSQQ---DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred ceeEEehhHHhh-HHHHHHHcCc---cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccc
Confidence 568999999955 9999998763 488899999999999999999999 999999999999999999999999999
Q ss_pred eeecCCC--CCCceecccccccccccccc-cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccc
Q 005864 554 AKFLKPG--SSNWTEFAGTFGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLS 623 (673)
Q Consensus 554 ~~~~~~~--~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~ 623 (673)
|+..... ....+..+.|.+|+|||.+. ...|+.+.||||.|||+.||++|+.-|.+.+.+.+.... .++.
T Consensus 172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~ 251 (359)
T KOG0660|consen 172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEED 251 (359)
T ss_pred eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHH
Confidence 9987542 33457788899999999875 567999999999999999999999999766554332111 1111
Q ss_pred --------cccccCCCCCCCCc----chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 --------LNEILDPRLPLPSR----NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 --------~~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+..-...+.. ..+...+...+++.+||..||.+|+|++|.++
T Consensus 252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 252 LQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 11111111111111 11233456889999999999999999999875
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=331.26 Aligned_cols=241 Identities=25% Similarity=0.336 Sum_probs=194.2
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||.||+|... +++.||+|.++..........+.+..|..++... +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999764 5889999998765433334455566677777654 899999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...........
T Consensus 81 g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~ 154 (316)
T cd05592 81 GDLMFHIQSSG---RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAS 154 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccc
Confidence 99999997653 478889999999999999999999 999999999999999999999999999986544344445
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+. ..+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~~~~~~~----~~~~~ 222 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED--------ELFDSILNDRPHFPR----WISKE 222 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCCCCC----CCCHH
Confidence 567899999999999889999999999999999999999999743221 111111111111121 22345
Q ss_pred HHHHHHHcccCCCCCCCCHHH
Q 005864 646 ILEVALLCLEESPESRPTMQT 666 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~~ 666 (673)
+.+++.+||+.||++||++.+
T Consensus 223 ~~~ll~~~l~~~P~~R~~~~~ 243 (316)
T cd05592 223 AKDCLSKLFERDPTKRLGVDG 243 (316)
T ss_pred HHHHHHHHccCCHHHcCCChH
Confidence 789999999999999998764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-39 Score=331.88 Aligned_cols=259 Identities=22% Similarity=0.330 Sum_probs=203.6
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||.||+|+.. +|..||+|.+.... .....+.+.+|++++++++||||+++++++..++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 367999999999999999999775 68899999887542 223456799999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.+++.... .+++..+..++.|++.|+.|||+.. +|+||||||+||+++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 156 (331)
T cd06649 82 MEHMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (331)
T ss_pred eecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccc
Confidence 99999999999997653 4788899999999999999999862 699999999999999999999999999876533
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccc---cccc----cccc--------
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS---SSNM----NLSL-------- 624 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~---~~~~----~~~~-------- 624 (673)
. ......|++.|+|||++.+..++.++|||||||++|||++|+.||......+.. .... ....
T Consensus 157 ~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (331)
T cd06649 157 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPR 234 (331)
T ss_pred c--ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccc
Confidence 2 223456899999999999989999999999999999999999999643211000 0000 0000
Q ss_pred -----------------------ccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 625 -----------------------NEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 625 -----------------------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
..+..... +.......+.++.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 235 PPGRPVSGHGMDSRPAMAIFELLDYIVNEPP--PKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred cccccccccccccccchhHHHHHHHHHhCCC--cCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000000 000011234568999999999999999999999863
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-39 Score=332.82 Aligned_cols=244 Identities=21% Similarity=0.279 Sum_probs=199.1
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCC-CcccceeeeeecCCeeeEEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH-RNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 480 (673)
+|++.+.||+|+||.||+|... +++.||+|++...........+.+..|.+++..++| ++|+++++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999765 578999999876544344456778889999999976 46888999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 9999999999997653 478899999999999999999999 9999999999999999999999999998754333
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........|++.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+.
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--------~~~~~i~~~~~~~~~---- 222 (324)
T cd05587 155 GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--------ELFQSIMEHNVSYPK---- 222 (324)
T ss_pred CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCCCCC----
Confidence 33344567899999999999999999999999999999999999999743221 111222222222222
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCH
Q 005864 641 DKLISILEVALLCLEESPESRPTM 664 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~ 664 (673)
..+.++.+++.+||+.||.+|++.
T Consensus 223 ~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 223 SLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred CCCHHHHHHHHHHhhcCHHHcCCC
Confidence 223458899999999999999976
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=323.48 Aligned_cols=261 Identities=23% Similarity=0.342 Sum_probs=211.0
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|.. .+|+.||||.+......+.....++.+|+.+++.++||||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999999975 479999999887644444445678899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 481 ECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
||+++++|.+++.... ....+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 9999999999987422 234589999999999999999999999 999999999999999999999999999887654
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.........++..|+|||++.+..++.++||||||+++|||++|..||...... .......+.....+ ....
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~--~~~~ 230 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LYSLCKKIEQCDYP--PLPS 230 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch------HHHHhhhhhcCCCC--CCCc
Confidence 433334456888999999998888999999999999999999999998532110 00111111111111 1111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+||+.||++|||+.+|++++++
T Consensus 231 ~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~ 264 (267)
T cd08229 231 DHYSEELRQLVNMCINPDPEKRPDITYVYDVAKR 264 (267)
T ss_pred ccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhh
Confidence 2345579999999999999999999999998874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=326.05 Aligned_cols=256 Identities=24% Similarity=0.409 Sum_probs=205.7
Q ss_pred cCCCccceeccCCcEEEEEEEeCC------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
++|++.+.||+|+||.||+|.... +..||+|.+.... .......+.+|+..+.+++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA--EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP 82 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC--CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc
Confidence 468889999999999999997642 2579999886542 23345678999999999999999999999999899
Q ss_pred eeEEEecccCCChHHHHhcCCCC-------------ccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC
Q 005864 476 SFLVYECLERGSLAEILSNDGSI-------------KEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS 542 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~-------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 542 (673)
.+++|||+++|+|.+++...... ..+++..+..++.|++.||+|||+. +++|+||||+||++++
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGE 159 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcC
Confidence 99999999999999999764211 3478899999999999999999999 9999999999999999
Q ss_pred CCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccc
Q 005864 543 EYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSN 619 (673)
Q Consensus 543 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~ 619 (673)
++.++|+|||++........ ......+++.|+|||++.+..++.++|||||||++|||++ |..||......+
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~----- 234 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQE----- 234 (283)
T ss_pred CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHH-----
Confidence 99999999999986543221 1223456788999999988899999999999999999998 999986432211
Q ss_pred cccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 620 MNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....+....... .....+.++.+++.+||+.||.+||+++||++.|++
T Consensus 235 ---~~~~i~~~~~~~---~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 235 ---VIEMIRSRQLLP---CPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred ---HHHHHHcCCcCC---CcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 111111111111 112345679999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-40 Score=320.36 Aligned_cols=253 Identities=24% Similarity=0.329 Sum_probs=205.0
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhh-----------hHHHHHHHHHHHHHhccCCCccccee
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSE-----------ISVQREFLNEIKALTEIRHRNIVKFY 467 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~-----------~~~~~~~~~e~~~l~~l~h~niv~l~ 467 (673)
..++|++.+.||+|.||.|-+|+.. +++.||||++.+..... ....+...+|+.+|++++|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 3478999999999999999999664 79999999996542211 11235788999999999999999999
Q ss_pred eeeecC--CeeeEEEecccCCChHHHHhcCCCCcc-chHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC
Q 005864 468 GFCSHP--RHSFLVYECLERGSLAEILSNDGSIKE-FSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY 544 (673)
Q Consensus 468 ~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~-l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 544 (673)
.+..++ +..|+|+|||..|.+... ....+ ++..++++++.++..||.|||.+ +|+||||||+|+|++++|
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~----p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWC----PPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccC----CCCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCC
Confidence 999764 578999999998887542 22234 89999999999999999999999 999999999999999999
Q ss_pred ceEEecccceeecCCC-----CCCceecccccccccccccccCC----cCcchhHHHHHHHHHHHHhCCCCCcccccccc
Q 005864 545 EARVSDFGIAKFLKPG-----SSNWTEFAGTFGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPRDFISLLSS 615 (673)
Q Consensus 545 ~~kl~Dfg~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~----~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~ 615 (673)
+|||+|||.+.....+ ........|||.|+|||...++. .+.+.||||+||+||.|+.|+.||-..
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~----- 322 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD----- 322 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc-----
Confidence 9999999999866332 12234578999999999987633 356899999999999999999998632
Q ss_pred cccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 616 SSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+...+++...+.+|.. .+....+.++|+++|.+||++|-+..+|..
T Consensus 323 ---~~~~l~~KIvn~pL~fP~~--pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 323 ---FELELFDKIVNDPLEFPEN--PEINEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred ---hHHHHHHHHhcCcccCCCc--ccccHHHHHHHHHHhhcChhheeehhhhee
Confidence 2234455666666665533 245567999999999999999999998864
|
|
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=333.49 Aligned_cols=244 Identities=22% Similarity=0.285 Sum_probs=199.5
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||.||+|+.. +|+.||+|++...........+.+..|.+++..+ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999765 5889999998765443444566778899998876 799999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...........
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05591 81 GDLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTT 154 (321)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCCcccc
Confidence 99999987653 478899999999999999999999 999999999999999999999999999986543333344
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...|++.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+. ..+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~--------~~~~~i~~~~~~~p~----~~~~~ 222 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED--------DLFESILHDDVLYPV----WLSKE 222 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCCCCCC----CCCHH
Confidence 567899999999999889999999999999999999999999743221 112222222222222 12345
Q ss_pred HHHHHHHcccCCCCCCC-------CHHHHHH
Q 005864 646 ILEVALLCLEESPESRP-------TMQTVCQ 669 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rp-------s~~~v~~ 669 (673)
+.+++.+||+.||++|| +++++++
T Consensus 223 ~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 223 AVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred HHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 88999999999999999 7787764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=335.38 Aligned_cols=247 Identities=23% Similarity=0.320 Sum_probs=196.9
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||+||+|+.. +++.||+|+++..........+.+..|+.++.++ +||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999765 6889999999875444444566788899988877 899999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (329)
T cd05618 81 GDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 154 (329)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccc
Confidence 9999988765 3478899999999999999999999 999999999999999999999999999975433333334
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccc-cccccccCCCCCCCCcchHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN-LSLNEILDPRLPLPSRNIQDKLI 644 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 644 (673)
...|++.|+|||++.+..++.++|||||||++|||++|+.||+............. .....+.......+. ..+.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~----~~~~ 230 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSV 230 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCC----CCCH
Confidence 56789999999999999999999999999999999999999963222111101001 111122222333322 2334
Q ss_pred HHHHHHHHcccCCCCCCCCH
Q 005864 645 SILEVALLCLEESPESRPTM 664 (673)
Q Consensus 645 ~l~~li~~cl~~dp~~Rps~ 664 (673)
.+.+++.+||+.||++||++
T Consensus 231 ~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 231 KAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred HHHHHHHHHhcCCHHHcCCC
Confidence 58899999999999999983
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-40 Score=342.89 Aligned_cols=251 Identities=24% Similarity=0.339 Sum_probs=207.0
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||+|+||+||+|+.. +|+.||+|+++............+.+|++++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36889999999999999999775 69999999997654444445678899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 999999999999875 3578899999999999999999998 9999999999999999999999999999876543
Q ss_pred C-----------------------------CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccc
Q 005864 561 S-----------------------------SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIS 611 (673)
Q Consensus 561 ~-----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 611 (673)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 3 12234568999999999999999999999999999999999999987433
Q ss_pred cccccccccccccccccC--CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 005864 612 LLSSSSSNMNLSLNEILD--PRLPLPSRNIQDKLISILEVALLCLEESPESRPT-MQTVCQ 669 (673)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-~~~v~~ 669 (673)
..+. ...+.. .....+... ..+.++.+++.+|+. ||.+||+ ++|+++
T Consensus 235 ~~~~--------~~~i~~~~~~~~~p~~~--~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 235 LQET--------YNKIINWKESLRFPPDP--PVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred HHHH--------HHHHhccCCcccCCCCC--CCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 2111 111111 111111111 134568899999997 9999999 999986
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=330.30 Aligned_cols=253 Identities=27% Similarity=0.359 Sum_probs=224.6
Q ss_pred hcCCCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeeeE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 478 (673)
...|++.+.||+|.||.||+++.+. |+.+|+|.+.+...........+.+|+.+|+++. |||||.+++++.+....++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 3568888999999999999998765 9999999998766554445678999999999998 9999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC----CceEEecccce
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE----YEARVSDFGIA 554 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~~ 554 (673)
|||++.||.|.+.+... .+++..+..++.|++.|++|||+. |++|||+||+|+++... +.+|++|||++
T Consensus 114 vmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla 186 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLA 186 (382)
T ss_pred EEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence 99999999999999876 288999999999999999999998 99999999999999643 47999999999
Q ss_pred eecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCC
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
..... .......+||+.|+|||++....|+.++||||+|+++|.|+.|..||..... ......+...++.+
T Consensus 187 ~~~~~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~--------~~~~~~i~~~~~~f 257 (382)
T KOG0032|consen 187 KFIKP-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETE--------FEIFLAILRGDFDF 257 (382)
T ss_pred eEccC-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCCh--------hHHHHHHHcCCCCC
Confidence 98876 5566789999999999999999999999999999999999999999984332 22334667777777
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....|...+..+.+++..|+..||.+|+|+.++++
T Consensus 258 ~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 258 TSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred CCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 77788888999999999999999999999999986
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=330.81 Aligned_cols=261 Identities=20% Similarity=0.296 Sum_probs=198.8
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||+||+|+.. +|+.||+|++...... .....+.+|+.+++.++||||+++++++.+++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE--GTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc--ccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 367999999999999999999775 6899999998654222 2234577899999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||++ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++.....
T Consensus 82 ~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 155 (303)
T cd07869 82 FEYVH-TDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSV 155 (303)
T ss_pred EECCC-cCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence 99996 58888886543 3478888999999999999999999 999999999999999999999999999976543
Q ss_pred CCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc--------ccccccc-----
Q 005864 560 GSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS--------NMNLSLN----- 625 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~--------~~~~~~~----- 625 (673)
.........+++.|+|||++.+ ..++.++||||+||++|||++|+.||........... .....+.
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
T cd07869 156 PSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSL 235 (303)
T ss_pred CCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhc
Confidence 3333344568899999998865 4578899999999999999999999975322110000 0000000
Q ss_pred -cccCCCCCC-CCcchH------HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 -EILDPRLPL-PSRNIQ------DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 -~~~~~~~~~-~~~~~~------~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+.. ...... ..+..+.+++.+|++.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 236 PHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred cccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000000000 000000 01235789999999999999999999985
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-41 Score=311.71 Aligned_cols=248 Identities=26% Similarity=0.414 Sum_probs=215.5
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
-|++++.+|+|+||.||+|.++ +|+.+|+|++... ...+++..|+.+|++++.|++|++||.+......++|||
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVME 108 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-----TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVME 108 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-----chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehh
Confidence 3677889999999999999664 7999999987543 247889999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
||.-|+..++++.++ +++++.++..++++.++||+|||.. .-+|||||+.||+++.+|.+|++|||.|..+....
T Consensus 109 YCGAGSiSDI~R~R~--K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM 183 (502)
T KOG0574|consen 109 YCGAGSISDIMRARR--KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM 183 (502)
T ss_pred hcCCCcHHHHHHHhc--CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhH
Confidence 999999999998765 6799999999999999999999998 78999999999999999999999999998776555
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.....+.||+.|||||++..-.|+.++||||+|++..||..|++||..+.+.+.. -++..+.+.-......
T Consensus 184 AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI---------FMIPT~PPPTF~KPE~ 254 (502)
T KOG0574|consen 184 AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI---------FMIPTKPPPTFKKPEE 254 (502)
T ss_pred HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee---------EeccCCCCCCCCChHh
Confidence 5667789999999999999999999999999999999999999999876654331 1122233333344556
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.++.+++++||-+.|++|.|+.++++
T Consensus 255 WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 255 WSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred hhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 6778999999999999999999999886
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=327.12 Aligned_cols=254 Identities=22% Similarity=0.264 Sum_probs=203.4
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||+|+||+||++... +++.||+|++.............+.+|+.++++++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4788899999999999999764 689999999875443333334567889999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++..... ..+++..+..++.|++.|+.|||+. +++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGN-PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred ccCCCcHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 9999999998875432 4589999999999999999999999 99999999999999999999999999998764322
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
......|+..|+|||++.+..++.++||||+|+++|||++|+.||........ .......+..... .....
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~-----~~~~~~~~~~~~~---~~~~~ 227 (285)
T cd05605 157 -TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVK-----REEVERRVKEDQE---EYSEK 227 (285)
T ss_pred -ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhH-----HHHHHHHhhhccc---ccCcc
Confidence 22345688999999999988899999999999999999999999974221100 0001111111111 11123
Q ss_pred HHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.+..+.+++.+||+.||++|| +++++++
T Consensus 228 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 228 FSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred cCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 445688999999999999999 8888864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-39 Score=339.72 Aligned_cols=252 Identities=22% Similarity=0.291 Sum_probs=203.5
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 467899999999999999999765 6899999998754333334456688999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 122 ~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 122 MEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 9999999999998753 367788888999999999999999 999999999999999999999999999987643
Q ss_pred CCC-CceecccccccccccccccC----CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC--C
Q 005864 560 GSS-NWTEFAGTFGYVAPELAYTM----KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR--L 632 (673)
Q Consensus 560 ~~~-~~~~~~~~~~y~aPE~~~~~----~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~ 632 (673)
... ......||+.|+|||.+.+. .++.++|||||||++|||++|+.||...... .....+.... +
T Consensus 195 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--------~~~~~i~~~~~~~ 266 (370)
T cd05596 195 NGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--------GTYSKIMDHKNSL 266 (370)
T ss_pred CCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH--------HHHHHHHcCCCcC
Confidence 322 22345789999999988653 3788999999999999999999999743221 1112222211 1
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPES--RPTMQTVCQ 669 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~~v~~ 669 (673)
..+. ....+.++.+++.+|+..+|++ ||+++|+++
T Consensus 267 ~~~~--~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 267 TFPD--DIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CCCC--cCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 1111 1123456889999999999987 999999975
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=344.70 Aligned_cols=252 Identities=23% Similarity=0.317 Sum_probs=210.1
Q ss_pred cCCCccceeccCCcEEEEEEEeCCC-CEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeee-eec------
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSG-EVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGF-CSH------ 472 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~-~~~------ 472 (673)
.++++.++|.+|||+.||.|+...+ ..||+|++-.. ++...+...+|+++|+.|+ |+|||.+++. ...
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~---de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN---DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC---CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 4567889999999999999987665 99999998654 5556889999999999996 9999999993 221
Q ss_pred CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 473 PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
..+++|.||||+||+|-|++..+... .|++.++++|+.|+++|+++||.. .|+|+|||||.+|||++.++..||||||
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~-~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQT-RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhc-cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccc
Confidence 24678999999999999999876543 399999999999999999999987 4589999999999999999999999999
Q ss_pred ceeecCCCCCCc---------eecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc
Q 005864 553 IAKFLKPGSSNW---------TEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM 620 (673)
Q Consensus 553 ~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~ 620 (673)
.+.-.-...... -...-|+.|+|||.+. +.++++|+|||+|||+||-|+....||+..
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~s---------- 261 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEES---------- 261 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcC----------
Confidence 987432222111 1234689999999864 678999999999999999999999999832
Q ss_pred ccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 621 NLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+|++.++.+|.. +.++..+.+||..||+.||.+||++-||+..+.
T Consensus 262 --g~laIlng~Y~~P~~--p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~ 309 (738)
T KOG1989|consen 262 --GKLAILNGNYSFPPF--PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIF 309 (738)
T ss_pred --cceeEEeccccCCCC--ccHHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence 245677777777643 566778999999999999999999999998763
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=337.88 Aligned_cols=247 Identities=24% Similarity=0.342 Sum_probs=193.4
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||+|+||+||+|... +|+.||||++.... .....+.+.+|+++++.++|+||+++++++...+..++|||
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 152 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH--EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLE 152 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC--cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEe
Confidence 4556788999999999999764 68999999986532 23345778999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+.. ..++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||++.......
T Consensus 153 ~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 153 FMDGGSLEGTH-------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred cCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence 99999986532 245677788999999999999999 99999999999999999999999999998765443
Q ss_pred CCceeccccccccccccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCC
Q 005864 562 SNWTEFAGTFGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
.......|+..|+|||++.. ...+.++|||||||++|||++|+.||......+ .......+..... .
T Consensus 223 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-----~~~~~~~~~~~~~---~ 294 (353)
T PLN00034 223 DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGD-----WASLMCAICMSQP---P 294 (353)
T ss_pred ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCcc-----HHHHHHHHhccCC---C
Confidence 33445678999999998743 224568999999999999999999987221100 0000000000000 0
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+.++.+++.+||+.||++|||+.|+++
T Consensus 295 ~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 295 EAPATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred CCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111233456899999999999999999999986
|
|
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=331.48 Aligned_cols=244 Identities=20% Similarity=0.275 Sum_probs=200.1
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+|++.+.||+|+||+||+|... +++.||+|.+...........+.+..|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788899999999999999765 5789999998765433344456677788888877 5899999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred cCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 9999999999987653 478899999999999999999999 9999999999999999999999999999765433
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+.
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~--------~~~~~~i~~~~~~~p~---- 222 (323)
T cd05616 155 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--------DELFQSIMEHNVAYPK---- 222 (323)
T ss_pred CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCC----
Confidence 3334456789999999999999999999999999999999999999974322 1112223333333332
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCH
Q 005864 641 DKLISILEVALLCLEESPESRPTM 664 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~ 664 (673)
..+.++.+++.+|++.||++|++.
T Consensus 223 ~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 223 SMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred cCCHHHHHHHHHHcccCHHhcCCC
Confidence 233458899999999999999984
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=330.53 Aligned_cols=244 Identities=23% Similarity=0.298 Sum_probs=199.7
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||+||+|... +++.||+|+++............+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999775 5889999999865444444566778899999888 799999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++...+ .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (318)
T cd05570 81 GDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTS 154 (318)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccc
Confidence 99999987653 488999999999999999999999 999999999999999999999999999875433333334
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...|++.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+. ..+..
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~--------~~~~~i~~~~~~~~~----~~~~~ 222 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED--------ELFQSILEDEVRYPR----WLSKE 222 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH--------HHHHHHHcCCCCCCC----cCCHH
Confidence 456899999999999999999999999999999999999999743221 111112222222221 22345
Q ss_pred HHHHHHHcccCCCCCCCCH-----HHHHH
Q 005864 646 ILEVALLCLEESPESRPTM-----QTVCQ 669 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~-----~~v~~ 669 (673)
+.+++.+||+.||++||++ .++++
T Consensus 223 ~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 223 AKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 8899999999999999999 77764
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-40 Score=300.47 Aligned_cols=256 Identities=24% Similarity=0.380 Sum_probs=220.3
Q ss_pred HHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhh-----hhHHHHHHHHHHHHHhcc-CCCcccceeeeee
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLS-----EISVQREFLNEIKALTEI-RHRNIVKFYGFCS 471 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 471 (673)
..-+.|+..+.+|.|..++|-+..+ ++|+.+|+|++...... ...-.+...+|+.+|+++ .||+|+++.+++.
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 3346788889999999999998855 47889999988543221 122345678899999999 6999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecc
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 551 (673)
.+...++|+|.|+.|.|.|++.+. -.+++....+|+.|+.+|+.|||.. .||||||||+||+++++.++||+||
T Consensus 94 s~sF~FlVFdl~prGELFDyLts~---VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDF 167 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLTSK---VTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDF 167 (411)
T ss_pred CcchhhhhhhhcccchHHHHhhhh---eeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEecc
Confidence 999999999999999999999875 4589999999999999999999999 9999999999999999999999999
Q ss_pred cceeecCCCCCCceeccccccccccccccc------CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccc
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYT------MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 625 (673)
|++..+.++ ......+|||+|.|||.+.. ..|+..+|.|+.|||+|-++.|.+||..- .....+.
T Consensus 168 GFa~~l~~G-ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR--------kQmlMLR 238 (411)
T KOG0599|consen 168 GFACQLEPG-EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR--------KQMLMLR 238 (411)
T ss_pred ceeeccCCc-hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH--------HHHHHHH
Confidence 999988664 45577899999999998753 34788999999999999999999998732 1223355
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
-++.+++.+....|.+.+....++|.+|++.||++|-|++|+++
T Consensus 239 ~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 239 MIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred HHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 67788888888899999999999999999999999999999875
|
|
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=328.37 Aligned_cols=261 Identities=24% Similarity=0.313 Sum_probs=201.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|+.. +++.||+|++...... ....+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN-EEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 36889999999999999999875 6889999998754322 233567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||++++.+..+.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 80 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 80 EYVEKNMLELLEEMP---NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred ecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 999997776554432 3578899999999999999999999 9999999999999999999999999999876433
Q ss_pred CC-CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------ccc---------c
Q 005864 561 SS-NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNL---------S 623 (673)
Q Consensus 561 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~---------~ 623 (673)
.. ......|++.|+|||++.+..++.++||||+||++|||++|+.||......+..... ... .
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07848 154 SNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPR 233 (287)
T ss_pred ccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccch
Confidence 22 223456899999999999888999999999999999999999999743221110000 000 0
Q ss_pred cccccCCCCCCCC----cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 LNEILDPRLPLPS----RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 ~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+....+. ......+.++.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000000000 011123456999999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=321.58 Aligned_cols=254 Identities=22% Similarity=0.398 Sum_probs=205.7
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.++|++.+.||+|+||.||+|...+++.||+|.+..... ..+.+.+|+.++++++|+||+++++++..++..+++|
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM----SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch----hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence 357889999999999999999988889999998764321 2567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.++++... ...+++.++..++.|++.|++|||+. +++||||||+||++++++.++++|||++......
T Consensus 81 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 81 EYMAKGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred ecCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 9999999999997643 24578899999999999999999998 9999999999999999999999999999876433
Q ss_pred CCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 561 SSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 561 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
... .....++..|+|||++....++.++||||||+++|||++ |+.||....... ....+. .....+.
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--------~~~~~~-~~~~~~~-- 225 (261)
T cd05072 157 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD--------VMSALQ-RGYRMPR-- 225 (261)
T ss_pred ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH--------HHHHHH-cCCCCCC--
Confidence 221 122345678999999988889999999999999999998 999986321110 000000 0111110
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....+.++.+++.+||+.+|++||+++++.+.|++
T Consensus 226 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 226 MENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 11233468899999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=340.82 Aligned_cols=251 Identities=23% Similarity=0.293 Sum_probs=202.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|+.. +|+.||||++.............+.+|++++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36889999999999999999775 68999999997654333445667889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++..+...
T Consensus 81 E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 9999999999997653 488899999999999999999999 9999999999999999999999999998765321
Q ss_pred CC--------------------------------------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh
Q 005864 561 SS--------------------------------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK 602 (673)
Q Consensus 561 ~~--------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~ 602 (673)
.. ......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 10 0012358999999999999899999999999999999999
Q ss_pred CCCCCcccccccccccccccccccccC--CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 005864 603 GKHPRDFISLLSSSSSNMNLSLNEILD--PRLPLPSRNIQDKLISILEVALLCLEESPESRPT---MQTVCQ 669 (673)
Q Consensus 603 g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~v~~ 669 (673)
|..||......+. ...+.. ..+..+.. ...+.++.+++.+|+. +|.+|++ ++|+++
T Consensus 235 G~~Pf~~~~~~~~--------~~~i~~~~~~~~~~~~--~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 235 GYPPFCSDNPQET--------YRKIINWKETLQFPDE--VPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCCCHHHH--------HHHHHcCCCccCCCCC--CCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 9999974332111 111111 11111111 1223457889999996 9999998 888865
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-39 Score=311.77 Aligned_cols=260 Identities=26% Similarity=0.379 Sum_probs=197.2
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhc--cCCCcccceeeeeecCC----
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTE--IRHRNIVKFYGFCSHPR---- 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~---- 474 (673)
.++..+.+.||+|.||+||+|+| -|..||||++... + .+.+.+|.++.+. +||+||+.+++.-..++
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~sr--d----E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T 282 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSR--D----ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT 282 (513)
T ss_pred hheeEEEEEecCccccceeeccc-cCCceEEEEeccc--c----hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence 45778889999999999999999 5899999999653 3 2345556666665 49999999998875543
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcC-----CCCeEEecCCCCCeEeCCCCceEEe
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDC-----FPPIVHRDISSKNVLLSSEYEARVS 549 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~ 549 (673)
..++|++|.+.|||+|+|.+. .++....++++..+|.||++||... .|.|.|||||+.||++..++.+.|+
T Consensus 283 QLwLvTdYHe~GSL~DyL~r~----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IA 358 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNRN----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 358 (513)
T ss_pred EEEEeeecccCCcHHHHHhhc----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEe
Confidence 468999999999999999874 4888999999999999999999764 4899999999999999999999999
Q ss_pred cccceeecCCCCC----CceecccccccccccccccCC------cCcchhHHHHHHHHHHHHhC----------CCCCcc
Q 005864 550 DFGIAKFLKPGSS----NWTEFAGTFGYVAPELAYTMK------VTEKCDVYSFGVLALEVIKG----------KHPRDF 609 (673)
Q Consensus 550 Dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~------~~~~~Dv~slG~il~el~~g----------~~p~~~ 609 (673)
|+|+|........ .....+||.+|||||++...- .-..+||||||+|+||+..+ +.||..
T Consensus 359 DLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd 438 (513)
T KOG2052|consen 359 DLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYD 438 (513)
T ss_pred eceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCccc
Confidence 9999988766533 235678999999999986432 12368999999999999863 345553
Q ss_pred cccccccccccc-cccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 610 ISLLSSSSSNMN-LSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 610 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.-+.+...+... ..-.+.+.|.++- .....+....+.++++.||..+|..|-|+--+-+.|.
T Consensus 439 ~Vp~DPs~eeMrkVVCv~~~RP~ipn-rW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~ 501 (513)
T KOG2052|consen 439 VVPSDPSFEEMRKVVCVQKLRPNIPN-RWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLA 501 (513)
T ss_pred CCCCCCCHHHHhcceeecccCCCCCc-ccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHH
Confidence 322221111110 0011112222221 1233456778999999999999999999988877764
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=337.53 Aligned_cols=252 Identities=22% Similarity=0.282 Sum_probs=197.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|... +++.||+|++......+......+.+|+.++.+++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 36889999999999999999664 68999999997654444445667889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 81 EFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred cCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 9999999999998653 488899999999999999999999 9999999999999999999999999998754321
Q ss_pred CC-----------------------------------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCC
Q 005864 561 SS-----------------------------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 605 (673)
Q Consensus 561 ~~-----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~ 605 (673)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 10 0123468999999999999999999999999999999999999
Q ss_pred CCcccccccccccccccccccccC--CCCCCCCcchHHHHHHHHHHHHHccc--CCCCCCCCHHHHHH
Q 005864 606 PRDFISLLSSSSSNMNLSLNEILD--PRLPLPSRNIQDKLISILEVALLCLE--ESPESRPTMQTVCQ 669 (673)
Q Consensus 606 p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~--~dp~~Rps~~~v~~ 669 (673)
||......+. ...+.. ..+..+... ..+.++.+++.+++. .++..||+++|+++
T Consensus 235 Pf~~~~~~~~--------~~~i~~~~~~~~~p~~~--~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~ 292 (363)
T cd05628 235 PFCSETPQET--------YKKVMNWKETLIFPPEV--PISEKAKDLILRFCCEWEHRIGAPGVEEIKT 292 (363)
T ss_pred CCCCCCHHHH--------HHHHHcCcCcccCCCcC--CCCHHHHHHHHHHcCChhhcCCCCCHHHHhC
Confidence 9974322111 111111 111111110 122346667766443 23445799999875
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-39 Score=323.72 Aligned_cols=256 Identities=26% Similarity=0.433 Sum_probs=206.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
++|.+.+.||+|+||.||+|... +++.||+|.++.... ....+.+.+|++++..++||||+++++++..+..
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 82 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS--NDARKDFEREAELLTNFQHENIVKFYGVCTEGDP 82 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC--HHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence 46888899999999999999763 357899999875422 2245789999999999999999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCC-----------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC
Q 005864 476 SFLVYECLERGSLAEILSNDGS-----------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY 544 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 544 (673)
.++||||+++|+|.+++...+. ...+++.++..++.|++.|++|||+. +++||||||+||+++.++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~ 159 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDL 159 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCC
Confidence 9999999999999999976431 24578899999999999999999999 999999999999999999
Q ss_pred ceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccc
Q 005864 545 EARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMN 621 (673)
Q Consensus 545 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~ 621 (673)
.++++|||++........ ......+++.|+|||++.+..++.++||||||+++|||++ |..||......
T Consensus 160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~-------- 231 (280)
T cd05049 160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE-------- 231 (280)
T ss_pred eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--------
Confidence 999999999976533221 1223345678999999999999999999999999999998 99998633211
Q ss_pred cccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 622 LSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.....+.......+. ...+..+.+++.+||+.||++||++.||++.|++
T Consensus 232 ~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 232 EVIECITQGRLLQRP---RTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHHHHHcCCcCCCC---CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 111111122222111 1234568999999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=310.90 Aligned_cols=253 Identities=23% Similarity=0.288 Sum_probs=214.8
Q ss_pred cCCCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+.|+..+.||.|.-|+||+++..+ +..+|+|++.+..........+...|-++|+.++||.++.+|+.++.+...|+||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 346667889999999999998864 6899999999887777777888999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC-
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP- 559 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~- 559 (673)
|||+||+|+...+++. .+.+++..+..++..|+-||+|||.. |||.|||||+|||+.++|++.++||+++.....
T Consensus 157 eyCpGGdL~~LrqkQp-~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQP-GKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred ecCCCccHHHHHhhCC-CCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 9999999999988764 46799999999999999999999999 999999999999999999999999999764311
Q ss_pred ------C-------------------------C-C-----------------------CceecccccccccccccccCCc
Q 005864 560 ------G-------------------------S-S-----------------------NWTEFAGTFGYVAPELAYTMKV 584 (673)
Q Consensus 560 ------~-------------------------~-~-----------------------~~~~~~~~~~y~aPE~~~~~~~ 584 (673)
. . . ....++||-.|.|||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 0 0 0012457889999999999999
Q ss_pred CcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCC-
Q 005864 585 TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPT- 663 (673)
Q Consensus 585 ~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps- 663 (673)
+.++|.|+|||++|||+.|..||.+. ..++.+..++-..+.++... ..+.++.+||++.|.+||++|--
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~--------~~~~Tl~NIv~~~l~Fp~~~--~vs~~akDLIr~LLvKdP~kRlg~ 382 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGS--------NNKETLRNIVGQPLKFPEEP--EVSSAAKDLIRKLLVKDPSKRLGS 382 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCC--------CchhhHHHHhcCCCcCCCCC--cchhHHHHHHHHHhccChhhhhcc
Confidence 99999999999999999999999843 33455566666666555332 55667999999999999999987
Q ss_pred ---HHHHH
Q 005864 664 ---MQTVC 668 (673)
Q Consensus 664 ---~~~v~ 668 (673)
+.||.
T Consensus 383 ~rGA~eIK 390 (459)
T KOG0610|consen 383 KRGAAEIK 390 (459)
T ss_pred ccchHHhh
Confidence 66654
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=316.92 Aligned_cols=255 Identities=24% Similarity=0.312 Sum_probs=195.5
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC-----ee
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR-----HS 476 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~ 476 (673)
.|...+++|.|+||.||+|... +++.||||++..... .-.+|+++|+.++|||||++.-+|.... ..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-------~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-------YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-------cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 4666799999999999999664 579999998765422 2246999999999999999999885432 33
Q ss_pred eEEEecccCCChHHHHhcC-CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-CceEEecccce
Q 005864 477 FLVYECLERGSLAEILSND-GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFGIA 554 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~ 554 (673)
.+|||||+. +|++.++.. .....++...+.-+..||++||+|||+. +|+||||||.|+|+|.+ |.+||||||.|
T Consensus 98 nlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 98 NLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred HHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcc
Confidence 589999998 999999842 1124466677788999999999999998 99999999999999987 89999999999
Q ss_pred eecCCCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------------
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM------------- 620 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~------------- 620 (673)
+....+... .....|..|+|||.+.+. .|+.+.||||.|||+.||+-|++-|.+.+..++.....
T Consensus 174 K~L~~~epn-iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 174 KVLVKGEPN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKS 252 (364)
T ss_pred eeeccCCCc-eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 998766554 456778999999988764 69999999999999999999999997654432211110
Q ss_pred -ccccccccCCCCCCCCc---chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 -NLSLNEILDPRLPLPSR---NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 -~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+...+.+..... .....+.+..+++.+++..+|.+|.++.|+++
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 00011122222221110 22334567999999999999999999999875
|
|
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=324.47 Aligned_cols=258 Identities=21% Similarity=0.348 Sum_probs=203.7
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP 473 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 473 (673)
..++|++.+.||+|+||.||+|.+. +++.||+|++.... ......++.+|+.+++.++||||+++++++..+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 4567999999999999999999653 35679999876432 223456788999999999999999999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCC-------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCce
Q 005864 474 RHSFLVYECLERGSLAEILSNDGS-------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEA 546 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 546 (673)
...++||||+++|+|.+++..... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~ 158 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTV 158 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCE
Confidence 999999999999999999975331 13467888999999999999999998 99999999999999999999
Q ss_pred EEecccceeecCCCCCCc--eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccc
Q 005864 547 RVSDFGIAKFLKPGSSNW--TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLS 623 (673)
Q Consensus 547 kl~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~ 623 (673)
+++|||+++......... ....+++.|+|||++.+..++.++|||||||++|||++ |..||...... ..
T Consensus 159 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~--------~~ 230 (277)
T cd05062 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE--------QV 230 (277)
T ss_pred EECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--------HH
Confidence 999999987654322211 12344678999999998889999999999999999999 78887633211 11
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 624 LNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+......... ...+..+.+++.+||+.||++|||+.|+++.|++
T Consensus 231 ~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 231 LRFVMEGGLLDKP---DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHHHcCCcCCCC---CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1111111111111 1223468899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=310.15 Aligned_cols=264 Identities=21% Similarity=0.302 Sum_probs=206.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCc-ccceeeeeecCC-----
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN-IVKFYGFCSHPR----- 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~----- 474 (673)
..|+..+.||+|.||+||+|+.+ +|+.||+|++.-.... +.......+|+.+++.++|+| ||++++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 34666778999999999999664 7999999998765332 223456789999999999999 999999998877
Q ss_pred -eeeEEEecccCCChHHHHhcCCCC-ccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 475 -HSFLVYECLERGSLAEILSNDGSI-KEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 475 -~~~lv~e~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
..++||||++. +|..++...... ..++...+..++.|+++|++|||++ +|+||||||.||+++++|.+||+|||
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccc
Confidence 78899999987 999999876532 3456688999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccc-------cccccccc
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS-------SSNMNLSL 624 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-------~~~~~~~~ 624 (673)
+|+...-+....+..++|.+|+|||++.+. .|++..||||+|||++||++++.-|.+....++. +...+..+
T Consensus 166 lAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~W 245 (323)
T KOG0594|consen 166 LARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDW 245 (323)
T ss_pred hHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCC
Confidence 999776555667778899999999998876 6999999999999999999999988755443221 11111111
Q ss_pred cccc---CCCCCCCCcc-----hH---HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 625 NEIL---DPRLPLPSRN-----IQ---DKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 625 ~~~~---~~~~~~~~~~-----~~---~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
..+. +-+..++... .. .......+++.+|++.+|.+|.|++.+++.
T Consensus 246 p~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 246 PGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 1111 1111111111 11 111368899999999999999999998864
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=339.95 Aligned_cols=251 Identities=20% Similarity=0.281 Sum_probs=198.9
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.|+..+.||+|+||+||+|+. .+++.||+|++...........+.+.+|++++..++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 578889999999999999966 4688999999976544444456789999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 999999999997653 478888899999999999999999 99999999999999999999999999975331100
Q ss_pred C-----------------------------------------------CceecccccccccccccccCCcCcchhHHHHH
Q 005864 562 S-----------------------------------------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFG 594 (673)
Q Consensus 562 ~-----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 594 (673)
. ......||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 0 01234689999999999988899999999999
Q ss_pred HHHHHHHhCCCCCcccccccccccccccccccccC--CCCCCCCcchHHHHHHHHHHHHH--cccCCCCCCCCHHHHHH
Q 005864 595 VLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD--PRLPLPSRNIQDKLISILEVALL--CLEESPESRPTMQTVCQ 669 (673)
Q Consensus 595 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~--cl~~dp~~Rps~~~v~~ 669 (673)
|++|||++|+.||......+. ...+.. .....+. ....+.++.+++.+ |+..+|..||+++|+++
T Consensus 236 ~il~elltG~~Pf~~~~~~~~--------~~~i~~~~~~~~~~~--~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTET--------QLKVINWENTLHIPP--QVKLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHHH--------HHHHHccccccCCCC--CCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 999999999999974322111 111111 1111111 11223457788887 55667777999999975
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-39 Score=328.49 Aligned_cols=243 Identities=23% Similarity=0.305 Sum_probs=194.8
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||+||+|+.. +++.||+|.++..........+.+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999775 5889999998765433233455667788888764 899999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++... ..+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...........
T Consensus 81 g~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05619 81 GDLMFHIQSC---HKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTC 154 (316)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCcee
Confidence 9999999764 3478889999999999999999999 999999999999999999999999999976433333344
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ....+.......+. ....+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~--------~~~~i~~~~~~~~~----~~~~~ 222 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE--------LFQSIRMDNPCYPR----WLTRE 222 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHhCCCCCCc----cCCHH
Confidence 5678999999999999899999999999999999999999987432211 11111111111111 22345
Q ss_pred HHHHHHHcccCCCCCCCCHH-HHH
Q 005864 646 ILEVALLCLEESPESRPTMQ-TVC 668 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~-~v~ 668 (673)
+.+++.+||+.||++||++. ++.
T Consensus 223 ~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 223 AKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred HHHHHHHHhccCHhhcCCChHHHH
Confidence 88999999999999999997 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=337.57 Aligned_cols=257 Identities=23% Similarity=0.377 Sum_probs=203.5
Q ss_pred hcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHP 473 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~ 473 (673)
.++|.+.+.||+|+||.||+|.+. .+..||||++.... .....+.+.+|++++.+++ ||||++++++|.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~--~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA--RSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC--ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 467889999999999999999752 23479999986542 2234567999999999996 99999999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCC--------------------------------------------------------
Q 005864 474 RHSFLVYECLERGSLAEILSNDGS-------------------------------------------------------- 497 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 497 (673)
+..++||||+++|+|.+++.....
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 999999999999999999865310
Q ss_pred -------------------------------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe
Q 005864 498 -------------------------------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL 540 (673)
Q Consensus 498 -------------------------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 540 (673)
...+++..+..++.|+++|++|||+. +++||||||+||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill 270 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEE
Confidence 12477888899999999999999999 99999999999999
Q ss_pred CCCCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccc
Q 005864 541 SSEYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSS 617 (673)
Q Consensus 541 ~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~ 617 (673)
++++.+||+|||+++....... ......+++.|+|||.+.+..++.++|||||||++|||++ |..||........
T Consensus 271 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~-- 348 (400)
T cd05105 271 AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST-- 348 (400)
T ss_pred eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH--
Confidence 9999999999999987643322 1123446788999999998899999999999999999997 9999864311100
Q ss_pred cccccccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 618 SNMNLSLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 618 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....+... +.+.+ ...+..+.+++.+||+.||++||++.+|.++|++
T Consensus 349 -----~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~ 396 (400)
T cd05105 349 -----FYNKIKSGYRMAKP----DHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVES 396 (400)
T ss_pred -----HHHHHhcCCCCCCC----ccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence 00001111 11111 2334568999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-39 Score=321.52 Aligned_cols=256 Identities=26% Similarity=0.470 Sum_probs=209.9
Q ss_pred HHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
+...+|++.+.||.|+||.||+|...+++.+|+|.+..... .....+.+|+.+++.++||||+++++++...+..++
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL---LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYI 79 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccch---hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEE
Confidence 34567889999999999999999988899999999865422 235678899999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
||||+++|+|.+++..... ..+++.++..++.|++.|++|||+. +++|+||+|+||++++++.+||+|||.+....
T Consensus 80 v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~ 155 (261)
T cd05148 80 ITELMEKGSLLAFLRSPEG-QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIK 155 (261)
T ss_pred EEeecccCCHHHHHhcCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcC
Confidence 9999999999999986532 4589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCCCCC
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPS 636 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 636 (673)
..........++..|+|||......++.++||||||+++|+|++ |+.||......+ ....+... +.+.+
T Consensus 156 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~- 226 (261)
T cd05148 156 EDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE--------VYDQITAGYRMPCP- 226 (261)
T ss_pred CccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH--------HHHHHHhCCcCCCC-
Confidence 43322233445678999999988889999999999999999998 899986432111 11111111 11111
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+.++.+++.+||+.||.+|||++++.+.|+.
T Consensus 227 ---~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 227 ---AKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred ---CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 2334568899999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-39 Score=328.68 Aligned_cols=243 Identities=24% Similarity=0.295 Sum_probs=195.4
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||.||+|+.. +|+.||+|.++..........+.+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999775 6899999998765433233455667788888765 899999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||+++..........
T Consensus 81 g~L~~~i~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05620 81 GDLMFHIQDK---GRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAS 154 (316)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCcee
Confidence 9999998765 3478889999999999999999999 999999999999999999999999999875433333445
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...|++.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+. ..+.+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--------~~~~~~~~~~~~~~~----~~~~~ 222 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--------ELFESIRVDTPHYPR----WITKE 222 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCC----CCCHH
Confidence 567899999999999999999999999999999999999998743211 111111111111121 12345
Q ss_pred HHHHHHHcccCCCCCCCCHH-HHH
Q 005864 646 ILEVALLCLEESPESRPTMQ-TVC 668 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~-~v~ 668 (673)
+.+++.+||+.||++||++. ++.
T Consensus 223 ~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 223 SKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHHHHHccCCHHHcCCChHHHH
Confidence 88999999999999999985 554
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=338.18 Aligned_cols=253 Identities=21% Similarity=0.295 Sum_probs=202.1
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
..++|++.+.||+|+||.||+|+.. +++.||+|.+...........+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 3568999999999999999999775 588999999875433333445668899999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
||||+++|+|.+++... .+++..+..++.||+.||+|||+. +|+||||||+||++++++.+||+|||++....
T Consensus 121 v~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 99999999999999754 367888999999999999999999 99999999999999999999999999998764
Q ss_pred CCCC-CceecccccccccccccccCC----cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC--
Q 005864 559 PGSS-NWTEFAGTFGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR-- 631 (673)
Q Consensus 559 ~~~~-~~~~~~~~~~y~aPE~~~~~~----~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-- 631 (673)
.... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||...... .....+++..
T Consensus 194 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~--------~~~~~i~~~~~~ 265 (370)
T cd05621 194 ETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV--------GTYSKIMDHKNS 265 (370)
T ss_pred cCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCcc
Confidence 3322 223567999999999987543 788999999999999999999999743221 1122222221
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPES--RPTMQTVCQ 669 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~~v~~ 669 (673)
+..+. ....+..+.+++..|+..+|.+ ||++.|+++
T Consensus 266 ~~~p~--~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~ 303 (370)
T cd05621 266 LNFPE--DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ 303 (370)
T ss_pred cCCCC--cccCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence 22221 1223455788899999865543 889999875
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-39 Score=318.89 Aligned_cols=254 Identities=25% Similarity=0.433 Sum_probs=205.7
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.++|++.+.||+|++|.||+|...+++.||+|.++.... ..+++.+|+.++++++||||+++++++...+..++||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence 456889999999999999999887888999999865322 2467889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++.... ...+++..+..++.|++.|+.|||+. +++||||||+||++++++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 81 ELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKED 156 (261)
T ss_pred ecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence 9999999999997654 24589999999999999999999999 9999999999999999999999999999876532
Q ss_pred CCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 561 SSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 561 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
... ......+..|+|||++.+..++.++||||||+++|||++ |+.||....... ... .+......+ .
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--------~~~-~~~~~~~~~--~ 225 (261)
T cd05068 157 IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE--------VLQ-QVDQGYRMP--C 225 (261)
T ss_pred cccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH--------HHH-HHHcCCCCC--C
Confidence 211 111223457999999998899999999999999999999 999986432111 000 111111111 1
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....+..+.+++.+|++.+|.+||+++++++.|++
T Consensus 226 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 226 PPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 11234568999999999999999999999999974
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=332.52 Aligned_cols=240 Identities=23% Similarity=0.289 Sum_probs=192.9
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHH-HHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIK-ALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||+||+|... +|+.||+|++...........+.+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999775 69999999987653333333445555555 56788999999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++... ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||++...........
T Consensus 81 g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (323)
T cd05575 81 GELFFHLQRE---RSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTS 154 (323)
T ss_pred CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccc
Confidence 9999999765 3478889999999999999999999 999999999999999999999999999875433333344
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...|++.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+. ..+..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~--------~~~~~i~~~~~~~~~----~~~~~ 222 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA--------EMYDNILNKPLRLKP----NISVS 222 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH--------HHHHHHHcCCCCCCC----CCCHH
Confidence 567899999999999999999999999999999999999998743221 111122222222222 22445
Q ss_pred HHHHHHHcccCCCCCCCCHH
Q 005864 646 ILEVALLCLEESPESRPTMQ 665 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~ 665 (673)
+.+++.+|++.||++||++.
T Consensus 223 ~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 223 ARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHHHhhcCHHhCCCCC
Confidence 88999999999999999984
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=318.07 Aligned_cols=261 Identities=23% Similarity=0.332 Sum_probs=211.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|... +|+.||+|.++.....+....+.+.+|++++++++|+|++++++++..++..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999776 79999999887544344445678999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 481 ECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
||+++|+|.+++.... ....+++.++..++.+++.|++|||+. +++||||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 9999999999986532 234578999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.........++..|+|||.+.+..++.++||||||+++|+|++|+.||...... .............+. ...
T Consensus 159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~--~~~ 230 (267)
T cd08224 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN------LYSLCKKIEKCDYPP--LPA 230 (267)
T ss_pred CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc------HHHHHhhhhcCCCCC--CCh
Confidence 433334456888999999998888999999999999999999999998532110 000000111111110 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+||..+|++|||+.+++++|++
T Consensus 231 ~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~ 264 (267)
T cd08224 231 DHYSEELRDLVSRCINPDPEKRPDISYVLQVAKE 264 (267)
T ss_pred hhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHH
Confidence 1344568899999999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-39 Score=317.57 Aligned_cols=251 Identities=24% Similarity=0.414 Sum_probs=202.6
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
++|.+.+.||+|+||+||.|+..++..||+|.+..... ....+.+|+.++.+++||||+++++++...+..++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM----SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTE 79 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc----cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEE
Confidence 35778899999999999999887777899998764322 24568899999999999999999999999889999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++.... ..+++.+++.++.|++.|++|||+. +++|+||+|+||++++++.+||+|||.++......
T Consensus 80 ~~~~~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 80 YMSNGCLLNYLREHG--KRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred cCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCc
Confidence 999999999997653 2589999999999999999999999 99999999999999999999999999998664332
Q ss_pred CC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 562 SN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 562 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.. .....++..|+|||...+..++.++||||||+++|||++ |..||......+ ....+..........
T Consensus 155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~-- 224 (256)
T cd05113 155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE--------TVEKVSQGLRLYRPH-- 224 (256)
T ss_pred eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--------HHHHHhcCCCCCCCC--
Confidence 11 112235578999999988889999999999999999998 999986432211 111111111111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+..+.+++.+||+.+|.+||++.++++.|+
T Consensus 225 -~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 225 -LASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred -CCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 12356899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-39 Score=315.71 Aligned_cols=258 Identities=27% Similarity=0.418 Sum_probs=195.4
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhc--cCCCcccceeeeeecCC----e
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTE--IRHRNIVKFYGFCSHPR----H 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~ 475 (673)
......++||+|.||.||+|.+ +++.||||++... ..+.|..|-++.+. ++|+||++++++-.... .
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~~------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPEQ------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred CchhhHHHhhcCccceeehhhc-cCceeEEEecCHH------HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 3445667899999999999999 5699999998653 35667777776665 48999999999976555 7
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCC------CCeEEecCCCCCeEeCCCCceEEe
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF------PPIVHRDISSKNVLLSSEYEARVS 549 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~------~~ivH~dlk~~Nill~~~~~~kl~ 549 (673)
+++|+||.+.|+|.++|+.+ .++|....+|+..+++||+|||+... |+|+|||||++|||+..|+++.|+
T Consensus 283 ywLVt~fh~kGsL~dyL~~n----tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIa 358 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKAN----TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIA 358 (534)
T ss_pred eeEEeeeccCCcHHHHHHhc----cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEee
Confidence 89999999999999999875 48999999999999999999998643 799999999999999999999999
Q ss_pred cccceeecCCCCCC--ceecccccccccccccccCC-c-----CcchhHHHHHHHHHHHHhCCCCCcc------ccccc-
Q 005864 550 DFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMK-V-----TEKCDVYSFGVLALEVIKGKHPRDF------ISLLS- 614 (673)
Q Consensus 550 Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~-~-----~~~~Dv~slG~il~el~~g~~p~~~------~~~~~- 614 (673)
|||+|.++.++... ...-+||.+|||||++.+.. + -.+.||||+|.|+|||+++-..++. .-+.+
T Consensus 359 DFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ 438 (534)
T KOG3653|consen 359 DFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEA 438 (534)
T ss_pred ccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhH
Confidence 99999998765432 23368999999999987653 2 2368999999999999986554421 11111
Q ss_pred -ccccccccc-----cccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 005864 615 -SSSSNMNLS-----LNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671 (673)
Q Consensus 615 -~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L 671 (673)
.......+. ..+...|.++...... .....+.+.+..||.+||+.|-|+.=|.+++
T Consensus 439 evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h-~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~ 500 (534)
T KOG3653|consen 439 EVGNHPTLEEMQELVVRKKQRPKIPDAWRKH-AGMAVLCETIEECWDHDAEARLTAGCVEERM 500 (534)
T ss_pred HhcCCCCHHHHHHHHHhhccCCCChhhhhcC-ccHHHHHHHHHHHcCCchhhhhhhHHHHHHH
Confidence 111111111 1222233333111111 2345689999999999999999998777655
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=335.96 Aligned_cols=252 Identities=24% Similarity=0.288 Sum_probs=203.9
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|... +|+.||+|+++..........+.+.+|+.++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36889999999999999999765 68999999998765444445677899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 9999999999998753 3588899999999999999999999 9999999999999999999999999999876543
Q ss_pred CCC-ceecccccccccccccc------cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC--C
Q 005864 561 SSN-WTEFAGTFGYVAPELAY------TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP--R 631 (673)
Q Consensus 561 ~~~-~~~~~~~~~y~aPE~~~------~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~ 631 (673)
... .....|++.|+|||++. ...++.++|||||||++|||++|+.||........ ...++.. .
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~--------~~~i~~~~~~ 227 (330)
T cd05601 156 KMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT--------YNNIMNFQRF 227 (330)
T ss_pred CceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHH--------HHHHHcCCCc
Confidence 322 23356899999999986 45678899999999999999999999964322111 1111111 1
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+. ....+.++.+++.+|+. +|.+||+++++++
T Consensus 228 ~~~~~--~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 228 LKFPE--DPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred cCCCC--CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 11111 11234458889999998 9999999999874
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=333.99 Aligned_cols=240 Identities=25% Similarity=0.314 Sum_probs=196.3
Q ss_pred ceeccCCcEEEEEEEe----CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecc
Q 005864 408 QCIGIGGQASVYRGEL----PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
+.||+|+||.||+++. .+|+.||+|++...... ......+..|++++.+++||||+++++++..++..++||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-VRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-hhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 5799999999999964 36899999998764322 223456778999999999999999999999999999999999
Q ss_pred cCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC
Q 005864 484 ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN 563 (673)
Q Consensus 484 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 563 (673)
++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.........
T Consensus 81 ~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~ 154 (318)
T cd05582 81 RGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 154 (318)
T ss_pred CCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc
Confidence 999999999764 3488999999999999999999999 9999999999999999999999999999866444333
Q ss_pred ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHH
Q 005864 564 WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKL 643 (673)
Q Consensus 564 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (673)
.....|++.|+|||.+.+..++.++|||||||++|||++|+.||...... .....+.......+.. .+
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~--------~~~~~i~~~~~~~p~~----~~ 222 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK--------ETMTMILKAKLGMPQF----LS 222 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH--------HHHHHHHcCCCCCCCC----CC
Confidence 44567899999999999888999999999999999999999998743221 1111222222222222 23
Q ss_pred HHHHHHHHHcccCCCCCCCCHHH
Q 005864 644 ISILEVALLCLEESPESRPTMQT 666 (673)
Q Consensus 644 ~~l~~li~~cl~~dp~~Rps~~~ 666 (673)
..+.+++.+||+.||++||++.+
T Consensus 223 ~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 223 PEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHHHHHHHhhcCHhHcCCCCC
Confidence 45889999999999999999544
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-39 Score=329.46 Aligned_cols=250 Identities=24% Similarity=0.438 Sum_probs=200.2
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCC----EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGE----VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
.+|+..+.||+|+||+||+|.+. +|+ .||+|.++.. ......+++.+|+.+++.++||||++++|+|..+ ..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~ 83 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 83 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence 46889999999999999999763 343 4899998643 2233457788999999999999999999999765 56
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++|+||+++|+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~v~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 84 QLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred eeeeecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccc
Confidence 79999999999999998653 3578889999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCce--ecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccC--CC
Q 005864 557 LKPGSSNWT--EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILD--PR 631 (673)
Q Consensus 557 ~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~ 631 (673)
+........ ...++..|+|||++.+..++.++||||||+++|||++ |+.||+.....+ ...++. ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~---------~~~~~~~~~~ 229 (316)
T cd05108 159 LGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---------ISSILEKGER 229 (316)
T ss_pred ccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---------HHHHHhCCCC
Confidence 654333221 2234678999999999999999999999999999998 999987432211 011111 11
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+.+.. .+.++.+++.+||+.+|.+||++.++++.+.
T Consensus 230 ~~~~~~----~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~ 266 (316)
T cd05108 230 LPQPPI----CTIDVYMIMVKCWMIDADSRPKFRELIIEFS 266 (316)
T ss_pred CCCCCC----CCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 222221 2345889999999999999999999998874
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=318.90 Aligned_cols=253 Identities=28% Similarity=0.448 Sum_probs=204.5
Q ss_pred cCCCccceeccCCcEEEEEEEeCC----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
++|++.+.||+|+||+||+|.++. ...||||.++... ......+|.+|+.++.+++||||+++++++...+..+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS--SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVM 81 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceE
Confidence 568899999999999999997742 4579999886543 2334667899999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++++|.+++.... ..+++.++.+++.|++.|++|||+. +|+|+||||+||++++++.++++|||++...
T Consensus 82 iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 82 IITEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred EEEEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 9999999999999997654 3688999999999999999999998 9999999999999999999999999999877
Q ss_pred CCCCCCce--ecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCC
Q 005864 558 KPGSSNWT--EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLP 633 (673)
Q Consensus 558 ~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 633 (673)
........ ...++..|+|||.+.+..++.++||||||+++|||++ |..||......+ ....+... ..+
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~~ 228 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQD--------VIKAVEDGYRLP 228 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHH--------HHHHHHcCCCCC
Confidence 52222211 2234578999999998899999999999999999998 999985322110 01111111 111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+ ...+..+.+++.+||+.+|++||+++|+++.|++
T Consensus 229 ~~----~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~ 264 (266)
T cd05033 229 PP----MDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK 264 (266)
T ss_pred CC----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 11 1234568899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=339.61 Aligned_cols=251 Identities=21% Similarity=0.273 Sum_probs=198.9
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|.. .+|+.||||++...........+.+.+|++++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3688999999999999999966 478999999987644334445677889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 E~~~gg~L~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 81 EFLPGGDLMTMLIKY---DTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 999999999999765 3478888999999999999999999 9999999999999999999999999998633210
Q ss_pred CC-----------------------------------------------CceecccccccccccccccCCcCcchhHHHH
Q 005864 561 SS-----------------------------------------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSF 593 (673)
Q Consensus 561 ~~-----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~sl 593 (673)
.. ......||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 00 0012468999999999998899999999999
Q ss_pred HHHHHHHHhCCCCCcccccccccccccccccccccC--CCCCCCCcchHHHHHHHHHHHHHcccCCCCCC---CCHHHHH
Q 005864 594 GVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD--PRLPLPSRNIQDKLISILEVALLCLEESPESR---PTMQTVC 668 (673)
Q Consensus 594 G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R---ps~~~v~ 668 (673)
||++|||++|+.||......+. ...+.. ..+..+. ....+.++.+++.+|+. +|.+| +++.|++
T Consensus 235 Gvil~elltG~~Pf~~~~~~~~--------~~~i~~~~~~~~~p~--~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l 303 (377)
T cd05629 235 GAIMFECLIGWPPFCSENSHET--------YRKIINWRETLYFPD--DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIK 303 (377)
T ss_pred chhhhhhhcCCCCCCCCCHHHH--------HHHHHccCCccCCCC--CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHh
Confidence 9999999999999964322111 111111 1111111 11223458899999997 66665 6999987
Q ss_pred H
Q 005864 669 Q 669 (673)
Q Consensus 669 ~ 669 (673)
+
T Consensus 304 ~ 304 (377)
T cd05629 304 S 304 (377)
T ss_pred c
Confidence 5
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-39 Score=352.34 Aligned_cols=259 Identities=25% Similarity=0.336 Sum_probs=203.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|... +|+.||+|++...........+++.+|++++++++||||+++++++.+++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 47899999999999999999765 58999999987654344445678999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCC--------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 481 ECLERGSLAEILSNDGS--------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
||++||+|.+++..... ....++..+.+++.||++||+|||+. +|+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 99999999999864211 12356778899999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCC------------------CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccc
Q 005864 553 IAKFLKPGS------------------SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLS 614 (673)
Q Consensus 553 ~~~~~~~~~------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~ 614 (673)
++....... .......||+.|+|||++.+..++.++||||+||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 998762111 01122468999999999999999999999999999999999999986422110
Q ss_pred ccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHhh
Q 005864 615 SSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRP-TMQTVCQLLC 672 (673)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-s~~~v~~~L~ 672 (673)
.. .......+... ....+.+..+.+++.+|++.||++|| +++++.+.|+
T Consensus 239 i~------~~~~i~~P~~~---~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le 288 (932)
T PRK13184 239 IS------YRDVILSPIEV---APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLE 288 (932)
T ss_pred hh------hhhhccChhhc---cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 00 00001111100 01123445688999999999999996 5666666553
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-39 Score=324.55 Aligned_cols=261 Identities=20% Similarity=0.318 Sum_probs=195.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC--CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc---CCCcccceeeeeec----
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP--SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI---RHRNIVKFYGFCSH---- 472 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~---- 472 (673)
++|++.+.||+|+||+||+|+.. +|+.||+|.++.....+ .....+.+|+.+++.+ +||||++++++|..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC-CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 36889999999999999999763 47889999886543222 1234455677776665 69999999999852
Q ss_pred -CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecc
Q 005864 473 -PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551 (673)
Q Consensus 473 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 551 (673)
....++||||++ ++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccc
Confidence 456889999997 599999876432 3478999999999999999999999 9999999999999999999999999
Q ss_pred cceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------cccc
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-------NLSL 624 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-------~~~~ 624 (673)
|++...... .......|++.|+|||.+.+..++.++|||||||++|||++|+.||......+...... ...+
T Consensus 155 g~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 233 (290)
T cd07862 155 GLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 233 (290)
T ss_pred cceEeccCC-cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhc
Confidence 999876433 22344568999999999988899999999999999999999999997433211100000 0000
Q ss_pred -------ccccCCCCCCCC-cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 625 -------NEILDPRLPLPS-RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 625 -------~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+......+. ....+.+..+.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 234 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000111100000 001123456789999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-40 Score=328.68 Aligned_cols=252 Identities=24% Similarity=0.403 Sum_probs=209.8
Q ss_pred cCCCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+....+.||.|.||.||.|.|+. .-.||||.++.. .....+|..|+.+|+.++|||+|+++|+|..+-.+|||+
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED----tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiT 342 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIIT 342 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhc----chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEE
Confidence 445566889999999999998864 668999998754 335889999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|||.+|+|.++|++... ..++.-..+.+|.||+.||.||..+ ++|||||.++|.|+.++..|||+|||+++++..+
T Consensus 343 EfM~yGNLLdYLRecnr-~ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgD 418 (1157)
T KOG4278|consen 343 EFMCYGNLLDYLRECNR-SEVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGD 418 (1157)
T ss_pred ecccCccHHHHHHHhch-hhcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccchhhhhcCC
Confidence 99999999999998754 4566677788999999999999999 9999999999999999999999999999999765
Q ss_pred CCCce-ecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 561 SSNWT-EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 561 ~~~~~-~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
..... ...-++.|.|||.+....++.|+|||+|||+|||+.| |-.||.+++..+. -..+...++.. .
T Consensus 419 TYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqV---------Y~LLEkgyRM~--~ 487 (1157)
T KOG4278|consen 419 TYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---------YGLLEKGYRMD--G 487 (1157)
T ss_pred ceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHH---------HHHHhcccccc--C
Confidence 43321 1223578999999999999999999999999999998 8888876544322 12222322221 2
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+.+++.+++++..||+.+|.+||+++|+-+.+|
T Consensus 488 PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafE 521 (1157)
T KOG4278|consen 488 PEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFE 521 (1157)
T ss_pred CCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHH
Confidence 2345567999999999999999999999988775
|
|
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=327.72 Aligned_cols=244 Identities=20% Similarity=0.278 Sum_probs=198.7
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeeeEEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 480 (673)
+|+..+.||+|+||+||+|... +|+.||+|++...........+.+..|..++..+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4778899999999999999764 68999999987654333444567888999998885 678888999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 9999999999997653 488999999999999999999999 9999999999999999999999999998754333
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........|++.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+.
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--------~~~~~~i~~~~~~~p~---- 222 (323)
T cd05615 155 GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE--------DELFQSIMEHNVSYPK---- 222 (323)
T ss_pred CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCc----
Confidence 3333445689999999999988999999999999999999999999874321 1112222222332222
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCH
Q 005864 641 DKLISILEVALLCLEESPESRPTM 664 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~ 664 (673)
..+.++.+++.+||+.+|.+|++.
T Consensus 223 ~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 223 SLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred cCCHHHHHHHHHHcccCHhhCCCC
Confidence 223458899999999999999974
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-39 Score=323.98 Aligned_cols=251 Identities=25% Similarity=0.403 Sum_probs=205.0
Q ss_pred CCCccceeccCCcEEEEEEEeC---CCC--EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 403 NFDAEQCIGIGGQASVYRGELP---SGE--VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~---~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
.....++||.|.||.||+|... .|+ .||||.-+... +.+..+.|.+|..+|+.++|||||+++|+|.+ ...+
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~--t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~W 466 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC--TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMW 466 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC--ChhhHHHHHHHHHHHHhCCCcchhheeeeeec-ccee
Confidence 3445678999999999999653 344 47888766543 33457889999999999999999999999976 4689
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+|||.++.|.|.++++... ..++......++.||+.||+|||+. .+|||||..+||++.....||++|||+++.+
T Consensus 467 ivmEL~~~GELr~yLq~nk--~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ 541 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNK--DSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYL 541 (974)
T ss_pred EEEecccchhHHHHHHhcc--ccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhc
Confidence 9999999999999999875 4688888899999999999999999 9999999999999999999999999999988
Q ss_pred CCCCCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCC
Q 005864 558 KPGSSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635 (673)
Q Consensus 558 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
..+... .+...-++.|||||.+.-+.++.+||||.|||.+||++. |..||.+....+.... ----.+++.|
T Consensus 542 ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~-------iEnGeRlP~P 614 (974)
T KOG4257|consen 542 EDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGH-------IENGERLPCP 614 (974)
T ss_pred cccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEE-------ecCCCCCCCC
Confidence 654432 233344678999999999999999999999999999996 9999985433222111 0112355655
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+.+ ++.++.++.+||+.+|.+||++.|+...|+
T Consensus 615 ~nC----Pp~LYslmskcWayeP~kRPrftei~~~ls 647 (974)
T KOG4257|consen 615 PNC----PPALYSLMSKCWAYEPSKRPRFTEIKAILS 647 (974)
T ss_pred CCC----ChHHHHHHHHHhccCcccCCcHHHHHHHHH
Confidence 544 445899999999999999999999998875
|
|
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=315.74 Aligned_cols=248 Identities=25% Similarity=0.420 Sum_probs=197.6
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERG 486 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 486 (673)
+.||+|+||.||+|... +|+.||+|.+.... .......+.+|++++++++||||+++++++...+..++|+||++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 46999999999999764 79999999876432 2334567899999999999999999999999999999999999999
Q ss_pred ChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCc--
Q 005864 487 SLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW-- 564 (673)
Q Consensus 487 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-- 564 (673)
+|.+++...+ ..+++.++..++.|++.||+|||+. +++||||+|+||+++.++.+|++|||++..........
T Consensus 79 ~L~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 79 DFLTFLRTEG--PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred cHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence 9999997643 3578999999999999999999999 99999999999999999999999999987554321111
Q ss_pred eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcchHHHH
Q 005864 565 TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKL 643 (673)
Q Consensus 565 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (673)
.....+..|+|||.+.++.++.++||||||+++|||++ |..||....... ....+......+ .....+
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~---------~~~~~~~~~~~~--~~~~~~ 222 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ---------TREAIEQGVRLP--CPELCP 222 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH---------HHHHHHcCCCCC--CcccCC
Confidence 11123457999999998889999999999999999998 888886332110 011111111111 111234
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 644 ISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 644 ~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+.+++.+||+.+|++|||++++.++|.+
T Consensus 223 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 223 DAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 568999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-39 Score=333.51 Aligned_cols=259 Identities=25% Similarity=0.417 Sum_probs=195.9
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-----Cee
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP-----RHS 476 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 476 (673)
+|++.+.||+|+||.||+|... +|+.||||++..... .......+.+|+.+++.++||||+++++++... ...
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE-HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc-cchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 4788899999999999999764 689999999864322 222345788999999999999999999988543 247
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||++ ++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 80 ~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 80 YVVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccc
Confidence 99999996 58999987653 488999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC---Cceeccccccccccccccc--CCcCcchhHHHHHHHHHHHHhCCCCCccccccccc-------cccccccc
Q 005864 557 LKPGSS---NWTEFAGTFGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS-------SSNMNLSL 624 (673)
Q Consensus 557 ~~~~~~---~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-------~~~~~~~~ 624 (673)
...... ......|++.|+|||++.+ ..++.++|||||||++|||++|+.||......... +.......
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 232 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETI 232 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 532221 2234578999999999865 67899999999999999999999999643221100 00000000
Q ss_pred c-----------cccCCCCCCC-CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 625 N-----------EILDPRLPLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 625 ~-----------~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
. ..+....+.+ .......+..+.+++.+||+.||++|||++|+++
T Consensus 233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 233 SRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0 0000011100 0011122345789999999999999999999985
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=315.28 Aligned_cols=252 Identities=24% Similarity=0.321 Sum_probs=207.3
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|.+.+.||+|++|.||+|... +|+.|++|.+...... ....+.+.+|+++++.++|||++++++++.+++..++|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 4777899999999999999765 6899999988653222 3346778999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++.... ...+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++++|||++.......
T Consensus 80 ~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 80 YAENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred eCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 999999999998652 24688999999999999999999998 99999999999999999999999999998775544
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.......+++.|+|||+..+..++.++|+||||+++|||++|+.||...... .....+.....+... ..
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~---~~ 224 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG--------ALILKIIRGVFPPVS---QM 224 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHcCCCCCCc---cc
Confidence 4344456889999999999989999999999999999999999998743211 111111222221111 13
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.+..+.+++.+||+.+|++||++.++++.
T Consensus 225 ~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 225 YSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 44568999999999999999999999863
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-39 Score=330.08 Aligned_cols=244 Identities=21% Similarity=0.249 Sum_probs=192.7
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHH-HHHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEI-KALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||+||+|+.. +++.||+|++.............+..|. .+++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999775 5788999998754333222334444444 456788999999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++...+ .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~ 154 (325)
T cd05602 81 GELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTS 154 (325)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcc
Confidence 99999997653 467788888999999999999999 999999999999999999999999999975433333344
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...|++.|+|||++.+..++.++||||+||++|||++|+.||......+ ....+.......+. ..+..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--------~~~~i~~~~~~~~~----~~~~~ 222 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE--------MYDNILNKPLQLKP----NITNS 222 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH--------HHHHHHhCCcCCCC----CCCHH
Confidence 5679999999999999999999999999999999999999987432211 11112222222211 23345
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHH
Q 005864 646 ILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.+++.+|++.||.+||++.+.+.
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 223 ARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred HHHHHHHHcccCHHHCCCCCCCHH
Confidence 889999999999999998875443
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=320.51 Aligned_cols=249 Identities=24% Similarity=0.285 Sum_probs=197.1
Q ss_pred eccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCCh
Q 005864 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSL 488 (673)
Q Consensus 410 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 488 (673)
||+|+||+||+++.+ +|+.||+|.+...........+.+..|++++++++||||+++++++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999765 6999999998654333333345566799999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCceecc
Q 005864 489 AEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA 568 (673)
Q Consensus 489 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 568 (673)
.+++..... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++....... ......
T Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~ 155 (277)
T cd05607 81 KYHIYNVGE-RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-TITQRA 155 (277)
T ss_pred HHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-eeeccC
Confidence 998865432 4588899999999999999999999 99999999999999999999999999998764322 223456
Q ss_pred cccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHH
Q 005864 569 GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILE 648 (673)
Q Consensus 569 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 648 (673)
|+..|+|||++.+..++.++||||+||++|||++|+.||........ ................. ...+.++.+
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~---~~~~~~~~~ 228 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA----KEELKRRTLEDEVKFEH---QNFTEESKD 228 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh----HHHHHHHhhcccccccc---ccCCHHHHH
Confidence 88999999999988899999999999999999999999863211000 01111112222222111 123456889
Q ss_pred HHHHcccCCCCCCCCHHHHHHH
Q 005864 649 VALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 649 li~~cl~~dp~~Rps~~~v~~~ 670 (673)
++.+||+.||++||+++|+++.
T Consensus 229 li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 229 ICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred HHHHHhccCHhhCCCCccchhh
Confidence 9999999999999999776643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=317.92 Aligned_cols=253 Identities=25% Similarity=0.406 Sum_probs=203.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|.+.+.||+|+||.||+|... .++.||+|.+... .....++.+|++++++++||||+++++++..++..++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 81 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC----chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence 45778899999999999999764 5889999987643 223567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++..... ..+++..+..++.|+++|++|||+. +++||||||+||++++++.+||+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 82 EFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred EeCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence 99999999999976432 4578999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCCc-eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 561 SSNW-TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 561 ~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
.... ....++..|+|||.+.+..++.++||||||+++|||++ |..||......+.. ....... ....+
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~-----~~~~~~~--~~~~~--- 227 (263)
T cd05052 158 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY-----ELLEKGY--RMERP--- 227 (263)
T ss_pred eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-----HHHHCCC--CCCCC---
Confidence 2211 11233568999999998899999999999999999998 99998643211100 0010000 11111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+.++.+++.+||+.+|++|||+.|++++|+.
T Consensus 228 -~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 228 -EGCPPKVYELMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred -CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence 1234568999999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=326.87 Aligned_cols=200 Identities=26% Similarity=0.431 Sum_probs=174.5
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||.||+|.+. +|..+|+|.+.... .......+.+|++++++++||||+++++++.+++..++|
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence 367999999999999999999775 68899999876542 223456789999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.+++...+ .+++..+..++.|++.|+.|||+.. +++||||||+||+++.++.+||+|||++.....
T Consensus 82 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 156 (333)
T cd06650 82 MEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 156 (333)
T ss_pred EecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhh
Confidence 99999999999997653 4788889999999999999999752 799999999999999999999999999875532
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcc
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDF 609 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 609 (673)
. ......|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 157 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 157 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred h--ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 2 22335688999999999988899999999999999999999999874
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-39 Score=328.85 Aligned_cols=240 Identities=23% Similarity=0.300 Sum_probs=192.0
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHH-HHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIK-ALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||.||+|+.. +|+.||+|++.............+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999775 68899999987654333334455555654 67889999999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05603 81 GELFFHLQRE---RCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTS 154 (321)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccc
Confidence 9999988754 3477888889999999999999999 999999999999999999999999999875433333334
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...|++.|+|||.+.+..++.++|||||||++|||++|+.||...... .....+.......+. .....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~i~~~~~~~~~----~~~~~ 222 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS--------QMYDNILHKPLQLPG----GKTVA 222 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH--------HHHHHHhcCCCCCCC----CCCHH
Confidence 567899999999999888999999999999999999999998643211 111222222232222 22345
Q ss_pred HHHHHHHcccCCCCCCCCHH
Q 005864 646 ILEVALLCLEESPESRPTMQ 665 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~ 665 (673)
+.+++.+|++.||.+||++.
T Consensus 223 ~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 223 ACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHHHccCCHhhcCCCC
Confidence 88999999999999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=330.84 Aligned_cols=241 Identities=23% Similarity=0.307 Sum_probs=193.4
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHH-HHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIK-ALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||+||+|+.. +|+.||+|++.............+..|.. +++.++||||+++++++..++..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999764 69999999987654333334455666655 46778999999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (325)
T cd05604 81 GELFFHLQRE---RSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTT 154 (325)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcc
Confidence 9999998765 3578899999999999999999999 999999999999999999999999999875433333344
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...|++.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+. ..+..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--------~~~~~~~~~~~~~~~----~~~~~ 222 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA--------EMYDNILHKPLVLRP----GASLT 222 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH--------HHHHHHHcCCccCCC----CCCHH
Confidence 567899999999999999999999999999999999999998643221 111222222222221 12345
Q ss_pred HHHHHHHcccCCCCCCCCHHH
Q 005864 646 ILEVALLCLEESPESRPTMQT 666 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~~ 666 (673)
+.+++.+|++.+|.+||++++
T Consensus 223 ~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 223 AWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred HHHHHHHHhccCHHhcCCCCC
Confidence 788999999999999998863
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=343.50 Aligned_cols=250 Identities=21% Similarity=0.219 Sum_probs=201.5
Q ss_pred CCCccceeccCCcEEEEEEEeC-C-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-S-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.|.+.+.||+|+||.||+|... + ++.||+|.+... .......+.+|+.+++.++|||||++++++..++..++||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~---~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~ 144 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN---DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIM 144 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEE
Confidence 4888999999999999999654 4 678888876432 2233566788999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcC-CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 481 ECLERGSLAEILSND-GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 481 e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
||+++|+|.++++.. .....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 145 E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 145 EYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD 221 (478)
T ss_pred ECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence 999999999988653 2234588899999999999999999999 999999999999999999999999999987643
Q ss_pred CCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 560 GSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 560 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+........
T Consensus 222 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~--------~~~~~~~~~~~~~~-- 291 (478)
T PTZ00267 222 SVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR--------EIMQQVLYGKYDPF-- 291 (478)
T ss_pred ccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCC--
Confidence 322 223456899999999999999999999999999999999999998643211 11112222222111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.++.+++.+||+.||++||+++++++
T Consensus 292 -~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 292 -PCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred -CccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 1123346889999999999999999999874
|
|
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=327.24 Aligned_cols=246 Identities=22% Similarity=0.290 Sum_probs=197.4
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||+||+|... +++.||+|+++..........+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999764 6889999999876544445567788999999988 699999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++... ..+++..+..++.|++.|++|||++ +++||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (327)
T cd05617 81 GDLMFHMQRQ---RKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTS 154 (327)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCcee
Confidence 9999988764 3488999999999999999999999 999999999999999999999999999975433333344
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...|++.|+|||++.+..++.++|||||||++|||++|+.||+........ .........+.......+. ..+..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~p~----~~~~~ 229 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDM-NTEDYLFQVILEKPIRIPR----FLSVK 229 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCccc-ccHHHHHHHHHhCCCCCCC----CCCHH
Confidence 567899999999999999999999999999999999999999643211100 0001111122222222222 22345
Q ss_pred HHHHHHHcccCCCCCCCCH
Q 005864 646 ILEVALLCLEESPESRPTM 664 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~ 664 (673)
+.+++.+||+.||++|+++
T Consensus 230 ~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 230 ASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred HHHHHHHHhccCHHHcCCC
Confidence 7899999999999999984
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-39 Score=331.98 Aligned_cols=253 Identities=22% Similarity=0.273 Sum_probs=199.5
Q ss_pred CCCccceeccCCcEEEEEEEe----CCCCEEEEEeeccchhh-hhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCee
Q 005864 403 NFDAEQCIGIGGQASVYRGEL----PSGEVVAVKKFHSLLLS-EISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 476 (673)
+|++.+.||+|+||.||+++. .+|+.||+|++...... .....+.+..|+.++..+ +||||+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478899999999999999965 36889999998754322 223456688899999999 599999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 99999999999999997653 478899999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC-CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCC
Q 005864 557 LKPGSS-NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 557 ~~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||........ .......+.......
T Consensus 155 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----~~~~~~~~~~~~~~~ 230 (332)
T cd05614 155 FLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT----QSEVSRRILKCDPPF 230 (332)
T ss_pred ccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC----HHHHHHHHhcCCCCC
Confidence 543322 22345789999999998765 478899999999999999999999863221100 001111111112222
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
+. ..+..+.+++.+||+.||++|| +++|+++
T Consensus 231 ~~----~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 231 PS----FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CC----CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 21 2334588999999999999999 7777764
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-39 Score=333.96 Aligned_cols=259 Identities=20% Similarity=0.287 Sum_probs=204.1
Q ss_pred HHHHHHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC
Q 005864 395 EEIIRATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP 473 (673)
Q Consensus 395 ~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 473 (673)
.++....++|++.+.||+|+||.||+|+.. +++.||+|.+...........+.+.+|+.+++.++||||+++++++.++
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 344445688999999999999999999775 6889999998754333334456688999999999999999999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccc
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGI 553 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 553 (673)
+..++||||+++|+|.+++... .++...+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 9999999999999999999754 367788889999999999999999 999999999999999999999999999
Q ss_pred eeecCCCCC-CceecccccccccccccccCC----cCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccccc
Q 005864 554 AKFLKPGSS-NWTEFAGTFGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEIL 628 (673)
Q Consensus 554 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~----~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 628 (673)
+........ ......||+.|+|||++.... ++.++||||+||++|||++|+.||....... ....++
T Consensus 189 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~--------~~~~i~ 260 (371)
T cd05622 189 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG--------TYSKIM 260 (371)
T ss_pred eeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHH--------HHHHHH
Confidence 987643322 223467999999999986543 7889999999999999999999997432211 112222
Q ss_pred CC--CCCCCCcchHHHHHHHHHHHHHcccCCCCC--CCCHHHHHHH
Q 005864 629 DP--RLPLPSRNIQDKLISILEVALLCLEESPES--RPTMQTVCQL 670 (673)
Q Consensus 629 ~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~~v~~~ 670 (673)
.. .+..+ .....+..+.+++..|+..++.+ ||+++|+++.
T Consensus 261 ~~~~~~~~~--~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 261 NHKNSLTFP--DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred cCCCcccCC--CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 11 11111 11233456888999999844433 7899988763
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-39 Score=330.24 Aligned_cols=258 Identities=23% Similarity=0.358 Sum_probs=201.3
Q ss_pred hcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeec-
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSH- 472 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~- 472 (673)
.++|++.+.||+|+||.||+|... +++.||+|++..... ....+.+..|+.++.++ +||||++++++|..
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT--ASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC--HHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 357899999999999999999532 357899999875422 22356778899999999 89999999998865
Q ss_pred CCeeeEEEecccCCChHHHHhcCCC-------------------------------------------------------
Q 005864 473 PRHSFLVYECLERGSLAEILSNDGS------------------------------------------------------- 497 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------- 497 (673)
+...++++||+++|+|.+++.....
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 4567899999999999999864321
Q ss_pred ---CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC--ceecccccc
Q 005864 498 ---IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFG 572 (673)
Q Consensus 498 ---~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~ 572 (673)
...++|..+..++.||+.||+|||+. +|+||||||+||++++++.++|+|||++..+...... .....++..
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence 12578999999999999999999999 9999999999999999999999999999876433221 123345678
Q ss_pred cccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHH
Q 005864 573 YVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVAL 651 (673)
Q Consensus 573 y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 651 (673)
|+|||++.+..++.++|||||||++|||++ |..||......+. ....+....... .......++.+++.
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~--------~~~~~~~~~~~~--~~~~~~~~~~~l~~ 310 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE--------FCRRLKEGTRMR--APEYATPEIYSIML 310 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH--------HHHHHhccCCCC--CCccCCHHHHHHHH
Confidence 999999999999999999999999999998 9999864221110 001111100000 01122346889999
Q ss_pred HcccCCCCCCCCHHHHHHHhhC
Q 005864 652 LCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 652 ~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
+||+.+|++||++.|+++.|++
T Consensus 311 ~cl~~~p~~RPs~~ell~~l~~ 332 (337)
T cd05054 311 DCWHNNPEDRPTFSELVEILGD 332 (337)
T ss_pred HHccCChhhCcCHHHHHHHHHH
Confidence 9999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=320.71 Aligned_cols=255 Identities=24% Similarity=0.410 Sum_probs=203.1
Q ss_pred hcCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
..+|.+.+.||+|+||+||++.. .++..+|+|.+.... ....+.+.+|++++.+++||||+++++++...+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQHEHIVKFYGVCVEGD 80 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC---HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 35688899999999999999964 235568999886532 234567899999999999999999999999999
Q ss_pred eeeEEEecccCCChHHHHhcCC----------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC
Q 005864 475 HSFLVYECLERGSLAEILSNDG----------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY 544 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 544 (673)
..++||||+++++|.+++...+ ....+++.++..++.|++.||+|||+. +++||||||+||++++++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~ 157 (288)
T cd05093 81 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 157 (288)
T ss_pred ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCC
Confidence 9999999999999999997543 123489999999999999999999999 999999999999999999
Q ss_pred ceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccc
Q 005864 545 EARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMN 621 (673)
Q Consensus 545 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~ 621 (673)
.++|+|||++........ ......++..|+|||++.+..++.++||||||+++|||++ |..||......+
T Consensus 158 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~------- 230 (288)
T cd05093 158 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE------- 230 (288)
T ss_pred cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-------
Confidence 999999999986533221 1122335678999999998889999999999999999998 899986432211
Q ss_pred cccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 622 LSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
....+.......... ..+.++.+++.+||+.||.+|||+.|+.+.|+
T Consensus 231 -~~~~i~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~ 277 (288)
T cd05093 231 -VIECITQGRVLQRPR---TCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQ 277 (288)
T ss_pred -HHHHHHcCCcCCCCC---CCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 111111111111111 22346899999999999999999999998886
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=320.64 Aligned_cols=254 Identities=21% Similarity=0.369 Sum_probs=202.4
Q ss_pred cCCCccceeccCCcEEEEEEEe-----CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-----PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
.+|++.+.||+|+||+||+|.. .+++.||+|.+.... .......+.+|++++++++||||+++++++..++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 82 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN--NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPV 82 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCce
Confidence 4578889999999999999964 356789999987532 223456788999999999999999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCC--------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC
Q 005864 477 FLVYECLERGSLAEILSNDGS--------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS 542 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~--------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 542 (673)
++||||+++|+|.+++..... ...+++.+...++.|++.||+|||++ +++||||||+||++++
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~ 159 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGE 159 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcC
Confidence 999999999999999863321 23478899999999999999999999 9999999999999999
Q ss_pred CCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccc
Q 005864 543 EYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSN 619 (673)
Q Consensus 543 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~ 619 (673)
++.+|++|||+++....... ......++..|+|||++.+..++.++||||||+++|||++ |..||......+
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~----- 234 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQE----- 234 (283)
T ss_pred CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH-----
Confidence 99999999999986543221 1122345678999999988889999999999999999998 998986322110
Q ss_pred cccccccccCC--CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 620 MNLSLNEILDP--RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 620 ~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+.+.. .++.+. ..+..+.+++.+||+.||++||++.++.+.|+.
T Consensus 235 ----~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 235 ----VIEMVRKRQLLPCSE----DCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred ----HHHHHHcCCcCCCCC----CCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 0011111 111111 223458899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-39 Score=337.40 Aligned_cols=250 Identities=20% Similarity=0.287 Sum_probs=197.2
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.|+..+.||+|+||+||+|+.. +++.||+|++...........+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5788999999999999999764 688999999876543344456788999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 999999999997653 478888899999999999999999 99999999999999999999999999975321000
Q ss_pred -----------------------------------------------CCceecccccccccccccccCCcCcchhHHHHH
Q 005864 562 -----------------------------------------------SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFG 594 (673)
Q Consensus 562 -----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 594 (673)
.......||+.|+|||++.+..++.++||||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 001124689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCccccccccccccccccccccc--CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 005864 595 VLALEVIKGKHPRDFISLLSSSSSNMNLSLNEIL--DPRLPLPSRNIQDKLISILEVALLCLEESPESRPT---MQTVCQ 669 (673)
Q Consensus 595 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~v~~ 669 (673)
|++|||++|+.||......+. ...+. ......+. ....+.++.+++.+|+ .+|++|++ ++|+++
T Consensus 236 vil~elltG~~Pf~~~~~~~~--------~~~i~~~~~~~~~p~--~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 236 VILYEMLVGQPPFLAQTPLET--------QMKVINWQTSLHIPP--QAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HHHHHHHhCCCCCCCCCHHHH--------HHHHHccCCCcCCCC--cccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 999999999999974322111 11111 11111111 1122345677777765 59999987 777764
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-39 Score=338.67 Aligned_cols=252 Identities=21% Similarity=0.260 Sum_probs=198.1
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.|++.+.||+|+||+||+|+.. +++.||+|.+...........+.+.+|++++.+++||||+++++.+.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6889999999999999999764 689999999876443333445678899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++..+....
T Consensus 82 ~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 82 YIPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 999999999997653 477888889999999999999999 99999999999999999999999999975321000
Q ss_pred -------------------------------------------CCceecccccccccccccccCCcCcchhHHHHHHHHH
Q 005864 562 -------------------------------------------SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLAL 598 (673)
Q Consensus 562 -------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ 598 (673)
.......||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 0011246899999999999999999999999999999
Q ss_pred HHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCC---CHHHHHH
Q 005864 599 EVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRP---TMQTVCQ 669 (673)
Q Consensus 599 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp---s~~~v~~ 669 (673)
||++|+.||......+...... ........+. ....+.++.+++.+|+ .+|.+|+ ++.|+++
T Consensus 236 ell~G~~Pf~~~~~~~~~~~i~------~~~~~~~~~~--~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 236 EMLVGQPPFLADTPAETQLKVI------NWETTLHIPS--QAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred ehhhCCCCCCCCCHHHHHHHHh------ccCccccCCC--CCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 9999999997443211100000 0001111111 1122345777888876 5999999 8888874
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-38 Score=315.18 Aligned_cols=251 Identities=25% Similarity=0.422 Sum_probs=201.9
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.+|++.+.||+|+||.||+|.++++..+|+|.+..... ....+.+|++++++++||||+++++++...+..++|+|
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM----SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE 79 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence 35788899999999999999888888999998864322 13467889999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||+++......
T Consensus 80 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~ 154 (256)
T cd05059 80 YMANGCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ 154 (256)
T ss_pred cCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceeccccc
Confidence 999999999997653 3588999999999999999999999 99999999999999999999999999998654322
Q ss_pred CC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 562 SN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 562 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.. .....++..|+|||.+.+..++.++||||||+++||+++ |+.||+.....+.. ....... ....+
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~-----~~~~~~~--~~~~~---- 223 (256)
T cd05059 155 YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVV-----ESVSAGY--RLYRP---- 223 (256)
T ss_pred ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHH-----HHHHcCC--cCCCC----
Confidence 11 111223457999999998899999999999999999999 89998743221110 0011111 11111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+.++.+++.+||+.+|++|||+.|+++.|.
T Consensus 224 ~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 224 KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 123456999999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=336.98 Aligned_cols=248 Identities=27% Similarity=0.466 Sum_probs=205.8
Q ss_pred CCccceeccCCcEEEEEEEe-CCCC----EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 404 FDAEQCIGIGGQASVYRGEL-PSGE----VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
....++||+|+||+||+|.+ +.|+ +||+|++... ...+...++.+|+..|.+++|||+++++|+|..+. ..+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~--t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~ql 774 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF--TSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQL 774 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeecc--CCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHH
Confidence 34468899999999999955 5554 5888887654 23345688999999999999999999999998776 789
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|++||+.|+|.|+++.++ ..+-....+.|..|||+||.|||++ ++|||||.++|||+.+...+||.|||+++...
T Consensus 775 vtq~mP~G~LlDyvr~hr--~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~ 849 (1177)
T KOG1025|consen 775 VTQLMPLGCLLDYVREHR--DNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLA 849 (1177)
T ss_pred HHHhcccchHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence 999999999999999875 4566788899999999999999999 99999999999999999999999999999887
Q ss_pred CCCCCceecc--cccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccccccc--CCCCC
Q 005864 559 PGSSNWTEFA--GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEIL--DPRLP 633 (673)
Q Consensus 559 ~~~~~~~~~~--~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 633 (673)
++...+.... -.+.|||-|.+....|+.++|||||||++||++| |..|++.+...+. .+.+ -.+++
T Consensus 850 ~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI---------~dlle~geRLs 920 (1177)
T KOG1025|consen 850 PDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI---------PDLLEKGERLS 920 (1177)
T ss_pred cccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh---------hHHHhccccCC
Confidence 7665554433 3578999999999999999999999999999998 9999986644322 1111 12345
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.|+.. ..+++.++.+||..|+..||+++++...+.
T Consensus 921 qPpiC----tiDVy~~mvkCwmid~~~rp~fkel~~~fs 955 (1177)
T KOG1025|consen 921 QPPIC----TIDVYMVMVKCWMIDADSRPTFKELAEEFS 955 (1177)
T ss_pred CCCCc----cHHHHHHHHHHhccCcccCccHHHHHHHHH
Confidence 44444 445889999999999999999999988764
|
|
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-38 Score=315.54 Aligned_cols=253 Identities=23% Similarity=0.357 Sum_probs=202.1
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|++.+.||+|+||.||+|.. .+|+.||+|++..... .....+.+|+.++.+++||||+++++++..++..++|+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~ 85 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG---DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM 85 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc---chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence 4689999999999999999976 4688999999864322 23456788999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.++++.. ..+++..+..++.|++.|+.|||+. +|+|||++|+||+++.++.++|+|||++..+...
T Consensus 86 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06646 86 EYCGGGSLQDIYHVT---GPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITAT 159 (267)
T ss_pred eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccc
Confidence 999999999998754 3478899999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC-C
Q 005864 561 SSNWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP-S 636 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 636 (673)
........++..|+|||.+. ...++.++||||+||++|||++|+.||......+... ......+..+ .
T Consensus 160 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~--------~~~~~~~~~~~~ 231 (267)
T cd06646 160 IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF--------LMSKSNFQPPKL 231 (267)
T ss_pred ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe--------eeecCCCCCCCC
Confidence 33334456888999999874 3457889999999999999999999986332211100 0001111100 0
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L 671 (673)
......+..+.+++.+||+.+|++|||++++++.|
T Consensus 232 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 232 KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 01112345689999999999999999999998754
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=316.24 Aligned_cols=253 Identities=23% Similarity=0.414 Sum_probs=204.0
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+.|++.+.||+|+||.||+|..++++.||+|.+..... ....+.+|+.++++++|||++++++++. .+..++++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM----SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIIT 79 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC----cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEE
Confidence 457889999999999999999988999999999865432 2457889999999999999999999874 45689999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++..... ..+++.++..++.|++.||+|||+. +++||||+|+||++++++.++++|||++......
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 80 EYMENGSLVDFLKTPEG-IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred EcCCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 99999999999876432 4688999999999999999999998 9999999999999999999999999999876532
Q ss_pred CC-CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 561 SS-NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 561 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
.. ......++..|+|||++.+..++.++||||||+++||+++ |+.||......+. ....... .+.+.+
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-----~~~~~~~--~~~~~~--- 225 (260)
T cd05067 156 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEV-----IQNLERG--YRMPRP--- 225 (260)
T ss_pred CcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHH-----HHHHHcC--CCCCCC---
Confidence 22 1223345678999999988889999999999999999999 9999864321110 0000000 011111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+.++.+++.+||+.+|++||+++++.+.|+.
T Consensus 226 -~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 226 -DNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -CCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 1233469999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=314.56 Aligned_cols=252 Identities=24% Similarity=0.401 Sum_probs=202.4
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
++|++.+.||+|+||+||+|.+.++..||+|++..... ..+.+.+|++++++++||||+++++++.+ +..++|||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~----~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e 80 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 80 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc----CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEE
Confidence 56889999999999999999887777899999875322 23568899999999999999999998754 55789999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+|||.+..+....
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 81 YMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred cCCCCcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 999999999997643 24578999999999999999999999 99999999999999999999999999998765433
Q ss_pred CCc-eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 562 SNW-TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 562 ~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
... ....++..|+|||+..+..++.++||||||+++|||++ |..||...... .....+.. ....+ ..
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~--------~~~~~~~~-~~~~~--~~ 225 (262)
T cd05071 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--------EVLDQVER-GYRMP--CP 225 (262)
T ss_pred cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH--------HHHHHHhc-CCCCC--Cc
Confidence 221 23345678999999988889999999999999999999 88888632211 01111111 11111 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+|++.||++||++.++++.|++
T Consensus 226 ~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 226 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred cccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 2345568999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=342.62 Aligned_cols=255 Identities=24% Similarity=0.281 Sum_probs=203.9
Q ss_pred HhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC----
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR---- 474 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 474 (673)
..++|.+.+.||+|+||+||+|+. .+|+.||||.+...... ......+.+|+..+..++|+|++++++.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~-~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS-EADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCC-HHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 346899999999999999999965 47999999998654332 234567889999999999999999988775432
Q ss_pred ----eeeEEEecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEe
Q 005864 475 ----HSFLVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVS 549 (673)
Q Consensus 475 ----~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 549 (673)
..++||||+++|+|.++++... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEE
Confidence 3679999999999999997542 234688999999999999999999999 99999999999999999999999
Q ss_pred cccceeecCCCC--CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccc
Q 005864 550 DFGIAKFLKPGS--SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEI 627 (673)
Q Consensus 550 Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 627 (673)
|||+++.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~--------~~~~~~ 257 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME--------EVMHKT 257 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHH
Confidence 999998764322 1223457899999999999999999999999999999999999999743211 111111
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........ ....+.++.+++.+||+.||++||++.++++
T Consensus 258 ~~~~~~~~---~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 258 LAGRYDPL---PPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred hcCCCCCC---CCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 21111111 1123446889999999999999999999975
|
|
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=330.08 Aligned_cols=252 Identities=20% Similarity=0.260 Sum_probs=195.7
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|.+.+.||+|+||.||+|.. .+++.||+|... ...+.+|++++++++||||+++++++..+...++|+
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~---------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~ 162 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ---------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL 162 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh---------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence 5799999999999999999966 468999999642 234678999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|++. ++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 163 e~~~-~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~ 235 (391)
T PHA03212 163 PRYK-TDLYCYLAAKR---NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI 235 (391)
T ss_pred ecCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccccc
Confidence 9986 68988887643 478899999999999999999999 9999999999999999999999999999754322
Q ss_pred -CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc--------------------
Q 005864 561 -SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------------------- 619 (673)
Q Consensus 561 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------------------- 619 (673)
........||+.|+|||++.+..++.++||||+||++|||++|+.||-...........
T Consensus 236 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~ 315 (391)
T PHA03212 236 NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPI 315 (391)
T ss_pred cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCc
Confidence 12233467999999999999989999999999999999999999886422111000000
Q ss_pred -ccccccccc---------CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 620 -MNLSLNEIL---------DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 620 -~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+.. .+............+.++.+++.+||+.||++|||++|+++
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 316 DAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred chhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000000 00000000111234567899999999999999999999985
|
|
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=313.87 Aligned_cols=252 Identities=26% Similarity=0.448 Sum_probs=203.0
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
++|++.+.||+|+||.||+|..+++..||+|.+...... .+.+.+|+.++++++|||++++++++. ....+++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e 80 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS----PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTE 80 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCC----HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEE
Confidence 468889999999999999999888889999998754322 356889999999999999999999885 456789999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++..... ..+++.++..++.|++.|++|||+. +++||||+|+||++++++.++++|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 81 YMSKGSLLDFLKDGEG-RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred ecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 9999999999976432 3578999999999999999999999 99999999999999999999999999998764332
Q ss_pred CCc-eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 562 SNW-TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 562 ~~~-~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
... ....++..|+|||+..+..++.++||||||+++|||++ |..||......+ ....+.. ....+ ..
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--------~~~~~~~-~~~~~--~~ 225 (260)
T cd05070 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE--------VLEQVER-GYRMP--CP 225 (260)
T ss_pred cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHH--------HHHHHHc-CCCCC--CC
Confidence 211 12335668999999988889999999999999999999 889986432111 1111111 11111 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+|+..+|++|||++++.+.|++
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 226 QDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 2334569999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-38 Score=319.47 Aligned_cols=254 Identities=24% Similarity=0.429 Sum_probs=203.0
Q ss_pred cCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
++|.+.+.||+|+||.||+|... ++..+++|.+.... ....+.+.+|++.+++++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT---LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP 81 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc---HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence 45778899999999999999642 45678999876532 2335678899999999999999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCC-------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC
Q 005864 476 SFLVYECLERGSLAEILSNDGS-------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS 542 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 542 (673)
.++||||+++++|.+++...+. ...+++..++.++.|++.|++|||++ +++||||||+||+++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGA 158 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEcc
Confidence 9999999999999999975431 23488999999999999999999999 9999999999999999
Q ss_pred CCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccc
Q 005864 543 EYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSN 619 (673)
Q Consensus 543 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~ 619 (673)
++.++|+|||++........ ......++..|+|||++.+..++.++||||||+++|||++ |+.||......+
T Consensus 159 ~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~----- 233 (291)
T cd05094 159 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE----- 233 (291)
T ss_pred CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----
Confidence 99999999999976543221 1223446788999999998899999999999999999999 999986432211
Q ss_pred cccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 620 MNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
....+......... ...+..+.+++.+||+.+|++|||+++|+++|+
T Consensus 234 ---~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~ 280 (291)
T cd05094 234 ---VIECITQGRVLERP---RVCPKEVYDIMLGCWQREPQQRLNIKEIYKILH 280 (291)
T ss_pred ---HHHHHhCCCCCCCC---ccCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 11111111111111 123346889999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-38 Score=312.27 Aligned_cols=249 Identities=27% Similarity=0.411 Sum_probs=205.4
Q ss_pred cCCCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|+..+.||+|+||.||+|...+ ++.|++|.+.... ..+.+.+|++++++++||||+++++++..+...++++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-----DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-----HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 578899999999999999998764 8899999986432 1678999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++...+ ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 78 e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 78 EYCGAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT 152 (256)
T ss_pred ecCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccC
Confidence 9999999999997643 4589999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........++..|+|||++.+..++.++||||||+++|||++|+.||......+.... ......+.+. ...
T Consensus 153 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~----~~~ 223 (256)
T cd06612 153 MAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM-----IPNKPPPTLS----DPE 223 (256)
T ss_pred ccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh-----hccCCCCCCC----chh
Confidence 3333445678899999999888999999999999999999999999874322111000 0000011111 112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+.+++.+||+.||++|||+.|+++
T Consensus 224 ~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 224 KWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred hcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 33456899999999999999999999986
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-38 Score=319.07 Aligned_cols=262 Identities=22% Similarity=0.349 Sum_probs=200.8
Q ss_pred cCCCccceeccCCcEEEEEEEeCC---------------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccce
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS---------------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 466 (673)
++|++.+.||+|+||.||++.... ...||+|.++... .......+.+|++++.+++|||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV--TKTARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence 578999999999999999986532 2358999987542 22345679999999999999999999
Q ss_pred eeeeecCCeeeEEEecccCCChHHHHhcCCC---------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCC
Q 005864 467 YGFCSHPRHSFLVYECLERGSLAEILSNDGS---------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKN 537 (673)
Q Consensus 467 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~N 537 (673)
++++...+..++||||+++++|.+++..... ...+++..+..++.|++.|++|||+. +++||||||+|
T Consensus 83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~N 159 (295)
T cd05097 83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRN 159 (295)
T ss_pred EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhh
Confidence 9999999999999999999999999965321 12468899999999999999999999 99999999999
Q ss_pred eEeCCCCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh--CCCCCcccccc
Q 005864 538 VLLSSEYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GKHPRDFISLL 613 (673)
Q Consensus 538 ill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~--g~~p~~~~~~~ 613 (673)
|++++++.+||+|||++........ ......++..|+|||+..++.++.++||||||+++|||++ |..||......
T Consensus 160 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~ 239 (295)
T cd05097 160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE 239 (295)
T ss_pred EEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence 9999999999999999976533221 1122344678999999988889999999999999999998 66777643221
Q ss_pred cccccccccccccccCCCCC-CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 614 SSSSSNMNLSLNEILDPRLP-LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
+... ...+..+.... .........+..+.+++.+||+.||++|||+++|++.|++
T Consensus 240 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 240 QVIE-----NTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHH-----HHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 1000 00000000000 0000011123469999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-38 Score=318.68 Aligned_cols=263 Identities=22% Similarity=0.352 Sum_probs=204.0
Q ss_pred hcCCCccceeccCCcEEEEEEEeCC-----------------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcc
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPS-----------------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNI 463 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 463 (673)
..+|++.+.||+|+||.||+|.... +..||+|.+..... ....+.+.+|++++.+++||||
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS--DNAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC--HHHHHHHHHHHHHHHhcCCCCE
Confidence 3578999999999999999986542 34689999875432 2346789999999999999999
Q ss_pred cceeeeeecCCeeeEEEecccCCChHHHHhcCCC--------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCC
Q 005864 464 VKFYGFCSHPRHSFLVYECLERGSLAEILSNDGS--------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISS 535 (673)
Q Consensus 464 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 535 (673)
+++++++..++..++|+||+++++|.+++..... ...+++..++.++.|++.||+|||+. +++|+||||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp 158 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLAT 158 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccch
Confidence 9999999999999999999999999999976531 12589999999999999999999999 999999999
Q ss_pred CCeEeCCCCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh--CCCCCcccc
Q 005864 536 KNVLLSSEYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GKHPRDFIS 611 (673)
Q Consensus 536 ~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~--g~~p~~~~~ 611 (673)
+||+++.++.++++|||+++....... ......+++.|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 159 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05051 159 RNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT 238 (296)
T ss_pred hceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC
Confidence 999999999999999999986543221 1223445778999999988889999999999999999998 677775322
Q ss_pred ccccccccccccccccc-CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 612 LLSSSSSNMNLSLNEIL-DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 612 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+.. ....... +.............+.++.+++.+||+.||++|||+.|+++.|++
T Consensus 239 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 239 DQQVI-----ENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred hHHHH-----HHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 11100 0000000 000000000111233569999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-38 Score=315.72 Aligned_cols=250 Identities=24% Similarity=0.389 Sum_probs=197.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCC----EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGE----VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
++|++.+.||+|+||+||+|.+. +|+ .|++|.+... .......++..|+..+.+++||||+++++++.. ...
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~ 83 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR--SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASL 83 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc--cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-Ccc
Confidence 46788899999999999999764 454 4777876532 222345678889999999999999999999864 456
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++++||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||+++.
T Consensus 84 ~~i~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred EEEEEeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCcccee
Confidence 78999999999999997643 3588999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC--C
Q 005864 557 LKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP--R 631 (673)
Q Consensus 557 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~ 631 (673)
....... .....++..|+|||++.++.++.++||||||+++||+++ |+.||....... ..+.+.. .
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---------~~~~~~~~~~ 229 (279)
T cd05111 159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE---------VPDLLEKGER 229 (279)
T ss_pred ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---------HHHHHHCCCc
Confidence 6443221 233456778999999998899999999999999999998 999986432211 0111111 1
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+. .....+.+++.+||..||++|||+.|+++.|.
T Consensus 230 ~~~~~----~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~ 266 (279)
T cd05111 230 LAQPQ----ICTIDVYMVMVKCWMIDENVRPTFKELANEFT 266 (279)
T ss_pred CCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11111 12335788999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-38 Score=318.70 Aligned_cols=262 Identities=23% Similarity=0.360 Sum_probs=201.9
Q ss_pred cCCCccceeccCCcEEEEEEEeC-----------------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCccc
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-----------------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIV 464 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 464 (673)
++|++.+.||+|+||.||++... ++..||+|.+.... .......+.+|+.+++.++||||+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA--NKNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcc
Confidence 46899999999999999998532 24468999886542 233457889999999999999999
Q ss_pred ceeeeeecCCeeeEEEecccCCChHHHHhcCCC--------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCC
Q 005864 465 KFYGFCSHPRHSFLVYECLERGSLAEILSNDGS--------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSK 536 (673)
Q Consensus 465 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~ 536 (673)
++++++..++..++||||+++|+|.+++..... ...+++.++..++.|++.|++|||+. +++|+||||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~ 159 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATR 159 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChh
Confidence 999999999999999999999999999976431 12477889999999999999999999 9999999999
Q ss_pred CeEeCCCCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh--CCCCCccccc
Q 005864 537 NVLLSSEYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK--GKHPRDFISL 612 (673)
Q Consensus 537 Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~--g~~p~~~~~~ 612 (673)
||++++++.++++|||++..+..... ......++..|+|||...++.++.++|||||||++|||++ |..||.....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05095 160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD 239 (296)
T ss_pred eEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 99999999999999999986543221 1122334678999999888889999999999999999998 7788764322
Q ss_pred ccccccccccccccc-cCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 613 LSSSSSNMNLSLNEI-LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 613 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+.... ........ .....+.+. ..+..+.+++.+||+.||.+||++.+|++.|++
T Consensus 240 ~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 240 EQVIEN-TGEFFRDQGRQVYLPKPA----LCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHH-HHHHHhhccccccCCCCC----CCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 111000 00000000 000111111 123568899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=319.20 Aligned_cols=255 Identities=24% Similarity=0.380 Sum_probs=201.3
Q ss_pred CCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 403 NFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
+|++.+.||+|+||.||+|... ....+++|.+..... ......+.+|+.+++.++||||+++++++..++..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS--SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC--HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 4778899999999999999652 235788988765422 23456789999999999999999999999999999
Q ss_pred eEEEecccCCChHHHHhcCC---------------------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCC
Q 005864 477 FLVYECLERGSLAEILSNDG---------------------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISS 535 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 535 (673)
++++||+++|+|.+++.... ....+++.++..++.|++.|++|||+. +++||||||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp 155 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAA 155 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhh
Confidence 99999999999999986532 123578999999999999999999999 999999999
Q ss_pred CCeEeCCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccc
Q 005864 536 KNVLLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISL 612 (673)
Q Consensus 536 ~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~ 612 (673)
+||++++++.+||+|||+++........ .....++..|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 156 ~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 235 (290)
T cd05045 156 RNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP 235 (290)
T ss_pred heEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 9999999999999999999765332221 122345678999999988889999999999999999998 9999864322
Q ss_pred ccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 613 LSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+ ..+........+ .....+.++.+++.+||+.+|++||+++|+++.|++
T Consensus 236 ~~---------~~~~~~~~~~~~--~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~ 285 (290)
T cd05045 236 ER---------LFNLLKTGYRME--RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEK 285 (290)
T ss_pred HH---------HHHHHhCCCCCC--CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 11 111111111110 011233468899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-38 Score=318.11 Aligned_cols=253 Identities=21% Similarity=0.263 Sum_probs=201.3
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|+..+.||+|+||+||+|... +++.||+|.+.............+.+|+++++.++|+|++++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 667789999999999999664 6899999998665433333455678899999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++++|.+++...+. ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05632 82 MNGGDLKFHIYNMGN-PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE- 156 (285)
T ss_pred ccCccHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC-
Confidence 999999998875432 3589999999999999999999999 99999999999999999999999999997654322
Q ss_pred CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHH
Q 005864 563 NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDK 642 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (673)
......|+..|+|||++.+..++.++|+||+|+++|||++|..||......... ......+....... ....
T Consensus 157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~----~~~~~~~~~~~~~~----~~~~ 228 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKR----EEVDRRVLETEEVY----SAKF 228 (285)
T ss_pred cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHHhhhcccccc----CccC
Confidence 223456899999999998889999999999999999999999998743211000 00011111111111 1123
Q ss_pred HHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 005864 643 LISILEVALLCLEESPESRPT-----MQTVCQ 669 (673)
Q Consensus 643 ~~~l~~li~~cl~~dp~~Rps-----~~~v~~ 669 (673)
+.++.+++.+||+.||++||+ +.++++
T Consensus 229 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 229 SEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred CHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 345889999999999999999 666654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-38 Score=312.35 Aligned_cols=251 Identities=22% Similarity=0.293 Sum_probs=204.7
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|++.+.||+|+||.||++... +++.||+|.+.... .....+.+.+|+.+++.++||||+++++++..++..++|+|
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK--SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc--chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 4778899999999999999765 68999999886432 22346778899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++.... ...+++..+..++.|++.|+.|||+. +++|+||||+||++++++.++++|||.+.......
T Consensus 79 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 79 YCDGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred eCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeecccc
Confidence 999999999987543 24578899999999999999999999 99999999999999999999999999998765443
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.......+++.|+|||++.+..++.++|+||||+++|+|++|+.||........ ...+........+ ..
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~~~~---~~ 223 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL--------ILKVCQGSYKPLP---SH 223 (255)
T ss_pred cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH--------HHHHhcCCCCCCC---cc
Confidence 333456688999999999888899999999999999999999999874322111 1111111111111 12
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.+..+.+++.+||+.||++||++.+++..
T Consensus 224 ~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 224 YSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred cCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 33458899999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=318.04 Aligned_cols=255 Identities=20% Similarity=0.304 Sum_probs=202.0
Q ss_pred CCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 403 NFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
+|++.+.||+|+||.||+|... +++.||+|+++... .....+.+.+|+.++..++||||+++++++...+..
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~ 83 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA--EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPL 83 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC--CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCce
Confidence 4667788999999999999753 35789999987542 223456788999999999999999999999999999
Q ss_pred eEEEecccCCChHHHHhcCC-------------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC
Q 005864 477 FLVYECLERGSLAEILSNDG-------------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 543 (673)
++++||+++++|.+++.... ....+++..+..++.|++.||+|||+. +++||||||+||+++++
T Consensus 84 ~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 84 SMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDK 160 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCC
Confidence 99999999999999985321 123478888999999999999999999 99999999999999999
Q ss_pred CceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccc
Q 005864 544 YEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNM 620 (673)
Q Consensus 544 ~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~ 620 (673)
+.+||+|||+++....... ......+++.|+|||++.++.++.++||||||+++|||++ |..||.....
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-------- 232 (283)
T cd05091 161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-------- 232 (283)
T ss_pred CceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH--------
Confidence 9999999999886533221 1123345678999999988889999999999999999998 8888764221
Q ss_pred ccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 621 NLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
......+.+...... ..+.+..+.+++.+||+.+|.+||+++++++.|+.
T Consensus 233 ~~~~~~i~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 233 QDVIEMIRNRQVLPC---PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHHHcCCcCCC---CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 111222222222111 11334558899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-38 Score=330.41 Aligned_cols=258 Identities=25% Similarity=0.394 Sum_probs=204.0
Q ss_pred HHhcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeee
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCS 471 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~ 471 (673)
...++|.+.+.||+|+||.||+|++. .++.||+|+++..... ...+.+.+|+.++.++. |||||+++++|.
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS--SEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh--hHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 33456788899999999999999753 3468999999754222 23457889999999997 999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCC------------------------------------------------------
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGS------------------------------------------------------ 497 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------ 497 (673)
..+..++|+||+++|+|.++++..+.
T Consensus 112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 99999999999999999999975321
Q ss_pred -----------------------------------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCC
Q 005864 498 -----------------------------------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSK 536 (673)
Q Consensus 498 -----------------------------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~ 536 (673)
...+++.....++.|++.||+|||+. +++||||||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~ 268 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAAR 268 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcc
Confidence 12367788899999999999999998 9999999999
Q ss_pred CeEeCCCCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccc
Q 005864 537 NVLLSSEYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLL 613 (673)
Q Consensus 537 Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~ 613 (673)
||++++++.+|++|||+++....... ......++..|+|||.+.+..++.++||||||+++|||++ |+.||......
T Consensus 269 NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~ 348 (401)
T cd05107 269 NVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN 348 (401)
T ss_pred eEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch
Confidence 99999999999999999986533221 1123456788999999998889999999999999999998 89998643211
Q ss_pred cccccccccccccccCC--CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 614 SSSSSNMNLSLNEILDP--RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 614 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
+. ..+.+.. +...+. ..+.++.+++.+||+.+|.+||+++|+++.|++
T Consensus 349 ~~--------~~~~~~~~~~~~~p~----~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~ 398 (401)
T cd05107 349 EQ--------FYNAIKRGYRMAKPA----HASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGD 398 (401)
T ss_pred HH--------HHHHHHcCCCCCCCC----CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 11 1111111 111111 224568999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-38 Score=311.05 Aligned_cols=252 Identities=24% Similarity=0.421 Sum_probs=202.0
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
++|++.+.||+|++|.||+|...++..+|+|.+..... ..+.+.+|+.++++++|||++++++++. .+..++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 80 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM----MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTE 80 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc----cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEE
Confidence 45888899999999999999887777899998764321 2456888999999999999999999875 456789999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.++++... ...+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 81 FMGKGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred cCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 999999999997643 24578999999999999999999999 99999999999999999999999999998764332
Q ss_pred CC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 562 SN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 562 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.. .....++..|+|||+..+..++.++||||||+++|||++ |+.||......+ ....+.. ....+ ..
T Consensus 157 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--------~~~~~~~-~~~~~--~~ 225 (260)
T cd05069 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--------VLEQVER-GYRMP--CP 225 (260)
T ss_pred ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHHc-CCCCC--CC
Confidence 21 122345678999999988889999999999999999999 899986432111 0111111 11111 11
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+||+.||++||+++++++.|++
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 226 QGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 2344568999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-38 Score=318.59 Aligned_cols=258 Identities=21% Similarity=0.337 Sum_probs=202.3
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP 473 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 473 (673)
..++|++.+.||+|+||.||+|..+ .+..||+|.+.... .......+.+|+.+++.++||||+++++++.+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA--SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 4568999999999999999999643 25589999876442 222345688899999999999999999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCC-------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCce
Q 005864 474 RHSFLVYECLERGSLAEILSNDGS-------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEA 546 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 546 (673)
+..++||||+++|+|.+++...+. ....++..+..++.|++.|++|||++ +++||||||+||++++++.+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcE
Confidence 999999999999999999975321 23456778889999999999999999 99999999999999999999
Q ss_pred EEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccc
Q 005864 547 RVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLS 623 (673)
Q Consensus 547 kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~ 623 (673)
+++|||+++........ .....++..|+|||.+.+..++.++|||||||++|||++ |..||...... ..
T Consensus 159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~--------~~ 230 (288)
T cd05061 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--------QV 230 (288)
T ss_pred EECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HH
Confidence 99999998865332211 122234678999999998899999999999999999998 78888643211 11
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 624 LNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+.+....... ...+..+.+++.+||+.||++|||+.++++.|++
T Consensus 231 ~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 277 (288)
T cd05061 231 LKFVMDGGYLDQP---DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 277 (288)
T ss_pred HHHHHcCCCCCCC---CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 1111111111111 1223469999999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-38 Score=317.95 Aligned_cols=249 Identities=24% Similarity=0.375 Sum_probs=202.8
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|+..+.||+|+||.||+|.. .+++.||+|.+..... .....+.+|+.+++.++||||+++++++..+...++||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc---chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 5788899999999999999975 4689999998865322 23567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 97 e~~~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~ 169 (296)
T cd06654 97 EYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (296)
T ss_pred cccCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcccc
Confidence 999999999998653 378889999999999999999999 9999999999999999999999999998865444
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........+++.|+|||.+.+..++.++|||||||++|||++|+.||......... ........... ....
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~-------~~~~~~~~~~~--~~~~ 240 (296)
T cd06654 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL-------YLIATNGTPEL--QNPE 240 (296)
T ss_pred ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH-------HHHhcCCCCCC--CCcc
Confidence 33334456889999999998888999999999999999999999998643221110 00001111110 1112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+..+.+++.+||..+|++|||+.++++
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred ccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 34456889999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-38 Score=315.58 Aligned_cols=256 Identities=23% Similarity=0.375 Sum_probs=204.6
Q ss_pred hcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
.++|.+.+.||+|+||.||+|... ++..||+|.+.... .......+.+|+.++..++||||+++++++..+.
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ 82 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence 357888999999999999999664 24689999986542 2233567889999999999999999999999999
Q ss_pred eeeEEEecccCCChHHHHhcCCC-------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceE
Q 005864 475 HSFLVYECLERGSLAEILSNDGS-------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEAR 547 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 547 (673)
..++||||+++|+|.+++..... ...+++..+..++.|++.|+.|||+. +++||||||+||++++++.+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEE
Confidence 99999999999999999975432 12468899999999999999999999 999999999999999999999
Q ss_pred EecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccc
Q 005864 548 VSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSL 624 (673)
Q Consensus 548 l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~ 624 (673)
|+|||+++.+..... ......++..|+|||.+.+..++.++|||||||++||+++ |..||......+ ..
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--------~~ 231 (277)
T cd05032 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE--------VL 231 (277)
T ss_pred ECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH--------HH
Confidence 999999876543221 1223446788999999988889999999999999999998 999986322111 11
Q ss_pred ccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 625 NEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 625 ~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+... ....+.. .+.++.+++.+||+.+|++|||+.++++.|++
T Consensus 232 ~~~~~~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 232 KFVIDGGHLDLPEN----CPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred HHHhcCCCCCCCCC----CCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 111111 1112221 24568999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-38 Score=321.49 Aligned_cols=260 Identities=18% Similarity=0.283 Sum_probs=199.3
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||+|+||+||+|+.+ +++.||+|.+...... .....+.+|++++++++||||+++++++..++..++||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF 83 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC--CcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence 46888999999999999999765 6888999998654222 22345778999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++ +|.+++...+ ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 84 e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 84 EYLDK-DLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVP 157 (309)
T ss_pred eCCCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence 99986 8888887653 3478888999999999999999999 9999999999999999999999999999865443
Q ss_pred CCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-------ccccccccc-----
Q 005864 561 SSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-------NMNLSLNEI----- 627 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-------~~~~~~~~~----- 627 (673)
........+++.|+|||.+.+ ..++.++||||+|+++|||++|+.||......+.... .....+..+
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07872 158 TKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDE 237 (309)
T ss_pred ccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhh
Confidence 333344567899999998865 4588999999999999999999999964322111000 000000000
Q ss_pred -cCCCCCCC-C----cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 628 -LDPRLPLP-S----RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 628 -~~~~~~~~-~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+...+.. . ......+.++.+++.+|++.||.+|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 238 FKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00000000 0 001123456889999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-38 Score=309.52 Aligned_cols=247 Identities=23% Similarity=0.390 Sum_probs=198.6
Q ss_pred ceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCC
Q 005864 408 QCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGS 487 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 487 (673)
+.||+|+||.||+|..++++.||+|.+..... ......+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 78 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP--QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGD 78 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCC--HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCc
Confidence 36899999999999988899999999865432 2234568899999999999999999999999999999999999999
Q ss_pred hHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCc-ee
Q 005864 488 LAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW-TE 566 (673)
Q Consensus 488 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~-~~ 566 (673)
|.+++.... ..+++..+..++.|++.|+.|+|+. +++||||+|+||++++++.+|++|||++.......... ..
T Consensus 79 L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (250)
T cd05085 79 FLSFLRKKK--DELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGL 153 (250)
T ss_pred HHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccccCCC
Confidence 999987543 3578999999999999999999999 99999999999999999999999999997654322111 12
Q ss_pred cccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 567 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
..++..|+|||++.+..++.++||||||+++||+++ |..||......... ....... +...+. ..+..
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~-----~~~~~~~--~~~~~~----~~~~~ 222 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAR-----EQVEKGY--RMSCPQ----KCPDD 222 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHH-----HHHHcCC--CCCCCC----CCCHH
Confidence 234567999999988889999999999999999998 99998643221100 0000000 111111 23456
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 646 ILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+.+++.+||+.+|++||++.|++++|.
T Consensus 223 ~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 223 VYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 899999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-38 Score=316.18 Aligned_cols=256 Identities=21% Similarity=0.311 Sum_probs=204.6
Q ss_pred hcCCCccceeccCCcEEEEEEEeCC-----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec-CC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPS-----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH-PR 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~ 474 (673)
.++|++.+.||+|+||.||+|.+.+ +..|++|++... ......+.+.+|+.++++++||||+++++++.. +.
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH--ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 4678889999999999999997755 788999987643 233456778999999999999999999999876 56
Q ss_pred eeeEEEecccCCChHHHHhcCCCC-----ccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEe
Q 005864 475 HSFLVYECLERGSLAEILSNDGSI-----KEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVS 549 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 549 (673)
..++++||+++|+|.+++...... ..+++..+..++.|++.||+|||+. +++|+||||+||++++++.+|++
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~ 159 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKIT 159 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEEC
Confidence 789999999999999999765322 4589999999999999999999999 99999999999999999999999
Q ss_pred cccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccccc
Q 005864 550 DFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNE 626 (673)
Q Consensus 550 Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~ 626 (673)
|||+++.+.+.... .....++..|+|||++.+..++.++||||||+++||+++ |+.||......+. ..
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~---------~~ 230 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEM---------AA 230 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHH---------HH
Confidence 99999866433221 112345678999999988889999999999999999999 9999874322110 01
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 627 ILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+....... .....+.++.+++.+||+.||++|||+.++++.|+
T Consensus 231 ~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 274 (280)
T cd05043 231 YLKDGYRLA--QPINCPDELFAVMACCWALDPEERPSFSQLVQCLT 274 (280)
T ss_pred HHHcCCCCC--CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 010111110 01123446889999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-38 Score=313.41 Aligned_cols=253 Identities=27% Similarity=0.453 Sum_probs=203.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
.+|++.+.||+|+||.||+|... .+..+|+|.++.... ....+.+..|+.++.+++||||+++++++..++..+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT--EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 46888999999999999999763 234799998865422 234678899999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||++..+
T Consensus 82 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred EEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 9999999999999997653 3578899999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCce---ecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CC
Q 005864 558 KPGSSNWT---EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RL 632 (673)
Q Consensus 558 ~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 632 (673)
........ ...++..|+|||++.+..++.++||||||+++||+++ |..||......+. ...+.+. +.
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~--------~~~~~~~~~~ 228 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDV--------IKAIEEGYRL 228 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHH--------HHHHhCCCcC
Confidence 54322111 1223567999999998889999999999999999886 9999864322111 1111111 11
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
+.+ ...+..+.+++.+||+.+|.+||++.++++.|++
T Consensus 229 ~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 265 (267)
T cd05066 229 PAP----MDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK 265 (267)
T ss_pred CCC----CCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence 111 1234568899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-38 Score=315.44 Aligned_cols=256 Identities=24% Similarity=0.346 Sum_probs=201.7
Q ss_pred hcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
+++|.+.+.||+|+||.||+|.+. .+..||+|.+.... .......+..|+.++++++|+||+++++++.+.+
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC--SEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 467889999999999999999764 35679999876432 2223567889999999999999999999999988
Q ss_pred eeeEEEecccCCChHHHHhcCCC----CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC---ceE
Q 005864 475 HSFLVYECLERGSLAEILSNDGS----IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY---EAR 547 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~k 547 (673)
..++||||+++++|.+++...+. ...+++..+.+++.||+.|++|||+. +++||||||+||+++.++ .+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~k 159 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceE
Confidence 99999999999999999976532 13589999999999999999999999 999999999999998654 599
Q ss_pred EecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccc
Q 005864 548 VSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSL 624 (673)
Q Consensus 548 l~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~ 624 (673)
++|||+++........ ......+..|+|||++.+..++.++|||||||++|||++ |..||+....... .
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~--------~ 231 (277)
T cd05036 160 IADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV--------M 231 (277)
T ss_pred eccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH--------H
Confidence 9999999866322111 112233568999999998899999999999999999997 9999874321110 0
Q ss_pred cccc-CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 625 NEIL-DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 625 ~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+. ..+...+. ..+..+.+++.+||+.+|++||++.+|++.|.+
T Consensus 232 ~~~~~~~~~~~~~----~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 232 EFVTGGGRLDPPK----GCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred HHHHcCCcCCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 0010 01111111 223568899999999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-38 Score=316.39 Aligned_cols=257 Identities=23% Similarity=0.411 Sum_probs=204.6
Q ss_pred hcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
.++|++.+.||+|+||.||+|..+ +++.||+|.+.... .....+++.+|+.++.+++||||+++++++..++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc--CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 357889999999999999999753 46789999987542 2234577999999999999999999999999999
Q ss_pred eeeEEEecccCCChHHHHhcCC-------------------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCC
Q 005864 475 HSFLVYECLERGSLAEILSNDG-------------------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISS 535 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~-------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 535 (673)
..++|+||+++|+|.+++.... ....+++.+++.++.|++.||+|||+. +++||||||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p 158 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLAT 158 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccH
Confidence 9999999999999999997431 113478889999999999999999999 999999999
Q ss_pred CCeEeCCCCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccc
Q 005864 536 KNVLLSSEYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISL 612 (673)
Q Consensus 536 ~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~ 612 (673)
+||++++++.++++|||++..+..... .......+..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 159 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~ 238 (288)
T cd05050 159 RNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH 238 (288)
T ss_pred hheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999876543221 1122334667999999988899999999999999999997 8888753322
Q ss_pred ccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 613 LSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+ ....+.+...... ....+.++.+++.+||+.||++|||+.|+++.|++
T Consensus 239 ~~--------~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 239 EE--------VIYYVRDGNVLSC---PDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HH--------HHHHHhcCCCCCC---CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 11 1111112221110 11234568999999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-38 Score=318.44 Aligned_cols=257 Identities=22% Similarity=0.370 Sum_probs=203.9
Q ss_pred hcCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHP 473 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 473 (673)
.++|.+.+.||+|+||.||+|.. .++..||+|.++... .....+.+.+|+.+++++ +||||+++++++...
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA--HSSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC--ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 35688999999999999999964 235589999886542 223456789999999999 799999999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccc
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGI 553 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 553 (673)
+..++||||+++|+|.++++.... ..+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++++|||+
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCcc
Confidence 999999999999999999976432 3479999999999999999999999 999999999999999999999999999
Q ss_pred eeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC
Q 005864 554 AKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP 630 (673)
Q Consensus 554 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 630 (673)
+......... .....++..|+|||.+.+..++.++||||+||++|||++ |..||......+. ..+....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~--------~~~~~~~ 259 (302)
T cd05055 188 ARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK--------FYKLIKE 259 (302)
T ss_pred cccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH--------HHHHHHc
Confidence 9865433221 112345678999999998899999999999999999998 9999864322110 1111111
Q ss_pred CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 631 RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 631 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..... .....+.++.+++.+||+.+|++|||+.|+++.|++
T Consensus 260 ~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 260 GYRMA--QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred CCcCC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 11110 011223468999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=311.23 Aligned_cols=249 Identities=24% Similarity=0.405 Sum_probs=217.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.-|++.+.||+|.|..|-.|++- +|.+||||++.+...++. ....+.+|+..|+-++|||||++|.+...+...|+|.
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~-st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL-STGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchh-hhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 45888899999999999999764 799999999987765543 3567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe-CCCCceEEecccceeecCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL-SSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill-~~~~~~kl~Dfg~~~~~~~ 559 (673)
|.-++|+|+|++-++. ..+.+..+.+++.||..|+.|+|+. .+|||||||+||.+ ..-|-||+.|||++..+.+
T Consensus 97 ELGD~GDl~DyImKHe--~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHE--EGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred EecCCchHHHHHHhhh--ccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 9999999999998775 4588999999999999999999999 99999999999977 4568899999999998876
Q ss_pred CCCCceecccccccccccccccCCcC-cchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
+. .....+|+..|.|||++.+..|+ +++||||+|||+|-++.|+.||+.. +..+.+--++|.++..|.
T Consensus 172 G~-kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeA--------NDSETLTmImDCKYtvPs-- 240 (864)
T KOG4717|consen 172 GK-KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEA--------NDSETLTMIMDCKYTVPS-- 240 (864)
T ss_pred cc-hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccc--------cchhhhhhhhcccccCch--
Confidence 54 45678899999999999998886 5899999999999999999999843 234556678888887663
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.+..++|..||..||++|.+.++++.
T Consensus 241 --hvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 241 --HVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred --hhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 45567899999999999999999999864
|
|
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=310.76 Aligned_cols=253 Identities=23% Similarity=0.299 Sum_probs=203.3
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhh--hhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLS--EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
++|+..+.||+|++|.||+|.. .+++.||+|.+...... .....+.+.+|++++++++||||+++++++..++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688999999999999999976 46899999988654222 22235678899999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|+||+++++|.+++...+ .+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||++....
T Consensus 82 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 999999999999997653 478888999999999999999999 99999999999999999999999999998664
Q ss_pred CCCCCc---eecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC
Q 005864 559 PGSSNW---TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635 (673)
Q Consensus 559 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
...... ....++..|+|||.+.+..++.++||||+|+++|||++|+.||......... .........
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~--------~~~~~~~~~-- 225 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAI--------FKIATQPTN-- 225 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHH--------HHHhccCCC--
Confidence 322211 2345778999999999988999999999999999999999998643221110 001111000
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
..........+.+++.+||..+|.+|||+.|+++.
T Consensus 226 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 226 PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 01111234458899999999999999999999864
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-38 Score=310.56 Aligned_cols=244 Identities=25% Similarity=0.380 Sum_probs=193.6
Q ss_pred eccCCcEEEEEEEeC---CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCC
Q 005864 410 IGIGGQASVYRGELP---SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERG 486 (673)
Q Consensus 410 ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 486 (673)
||+|+||.||+|.+. .+..||+|.+.... .....+.+.+|+.++++++||||+++++++. .+..++||||+++|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~--~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~ 79 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN--EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGG 79 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEccccc--ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCC
Confidence 899999999999653 35679999886542 2334567999999999999999999999885 45678999999999
Q ss_pred ChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce-
Q 005864 487 SLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT- 565 (673)
Q Consensus 487 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~- 565 (673)
+|.+++.... ..+++..+..++.|++.|++|||++ +++||||||+||+++.++.+|++|||++...........
T Consensus 80 ~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 80 PLNKFLSGKK--DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence 9999997543 4588999999999999999999999 999999999999999999999999999986544332211
Q ss_pred --ecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccC-CCCCCCCcchHH
Q 005864 566 --EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILD-PRLPLPSRNIQD 641 (673)
Q Consensus 566 --~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 641 (673)
...++..|+|||.+.+..++.++||||||+++||+++ |+.||......+. ...+.. .....+ ..
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--------~~~~~~~~~~~~~----~~ 222 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEV--------MSFIEQGKRLDCP----AE 222 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHH--------HHHHHCCCCCCCC----CC
Confidence 1223568999999988889999999999999999996 9999874322111 000000 011111 12
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+.++.+++.+||..+|++||++.+|.+.|++
T Consensus 223 ~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~ 254 (257)
T cd05115 223 CPPEMYALMKDCWIYKWEDRPNFAKVEERMRT 254 (257)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence 34568899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=317.14 Aligned_cols=253 Identities=23% Similarity=0.373 Sum_probs=198.4
Q ss_pred cCCCccceeccCCcEEEEEEEeCC-CC--EEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS-GE--VVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 477 (673)
++|++.+.||+|+||.||+|...+ +. .+++|.++... .....+.+.+|++++.++ +||||+++++++...+..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA--SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC--CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 578899999999999999997653 43 47888876432 222356789999999999 7999999999999989999
Q ss_pred EEEecccCCChHHHHhcCC-------------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC
Q 005864 478 LVYECLERGSLAEILSNDG-------------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY 544 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 544 (673)
+|+||+++|+|.+++.... ....+++..+..++.|++.|++|||+. +++||||||+||++++++
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~ 156 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENL 156 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCC
Confidence 9999999999999997542 113478899999999999999999998 999999999999999999
Q ss_pred ceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccc
Q 005864 545 EARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLS 623 (673)
Q Consensus 545 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~ 623 (673)
.+||+|||++........ ......+..|+|||+..+..++.++|||||||++|||++ |..||......+ .
T Consensus 157 ~~kl~dfg~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~--------~ 227 (297)
T cd05089 157 ASKIADFGLSRGEEVYVK-KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE--------L 227 (297)
T ss_pred eEEECCcCCCccccceec-cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--------H
Confidence 999999999864321111 111223457999999988889999999999999999997 999986432211 0
Q ss_pred cccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 624 LNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 624 ~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
....... ....+ ...+.++.+++.+||+.+|.+||+++++++.|+
T Consensus 228 ~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 273 (297)
T cd05089 228 YEKLPQGYRMEKP----RNCDDEVYELMRQCWRDRPYERPPFAQISVQLS 273 (297)
T ss_pred HHHHhcCCCCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111111 11111 123346889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-38 Score=316.82 Aligned_cols=254 Identities=22% Similarity=0.278 Sum_probs=201.6
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.|+..+.||+|+||+||+|... +++.||+|.+...........+.+.+|+.++++++|++++++++.+.+.+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3677789999999999999664 689999999875433333344567889999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++...+. ..+++.++..++.|++.|+.|||+. +++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGE-AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred ecCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 9999999999865432 3588999999999999999999998 99999999999999999999999999997654322
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
......|+..|+|||++.+..++.++||||+|+++|||++|+.||........ ............. .....
T Consensus 157 -~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-----~~~~~~~~~~~~~---~~~~~ 227 (285)
T cd05630 157 -TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-----REEVERLVKEVQE---EYSEK 227 (285)
T ss_pred -cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch-----HHHHHhhhhhhhh---hcCcc
Confidence 22335689999999999998999999999999999999999999874211000 0001111110000 01112
Q ss_pred HHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPT-----MQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps-----~~~v~~ 669 (673)
.+.++.+++.+||+.||++||| ++|+++
T Consensus 228 ~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 228 FSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred CCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 3345889999999999999999 888875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-38 Score=318.72 Aligned_cols=257 Identities=22% Similarity=0.369 Sum_probs=204.2
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeec
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSH 472 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 472 (673)
..++|++.+.||+|+||.||+|... ....+|+|.+..... .....++.+|++++.++ +||||+++++++..
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 87 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT--EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ 87 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC--HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC
Confidence 3457888999999999999999763 246799998875422 23456788999999999 89999999999999
Q ss_pred CCeeeEEEecccCCChHHHHhcC-------------CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeE
Q 005864 473 PRHSFLVYECLERGSLAEILSND-------------GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVL 539 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil 539 (673)
++..+++|||+++|+|.++++.. .....+++..+..++.|++.|++|||+. +++||||||+||+
T Consensus 88 ~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil 164 (293)
T cd05053 88 EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVL 164 (293)
T ss_pred CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEE
Confidence 99999999999999999999753 1235689999999999999999999999 9999999999999
Q ss_pred eCCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccc
Q 005864 540 LSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSS 616 (673)
Q Consensus 540 l~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~ 616 (673)
+++++.+|++|||+++.+...... .....++..|+|||++.+..++.++|||||||++||+++ |..||......+.
T Consensus 165 ~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~- 243 (293)
T cd05053 165 VTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL- 243 (293)
T ss_pred EcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHH-
Confidence 999999999999999876443211 122234578999999988899999999999999999997 9999864322111
Q ss_pred ccccccccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 617 SSNMNLSLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 617 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....... ....+. ..+..+.+++.+||..||++|||+.|+++.|++
T Consensus 244 -------~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~ 290 (293)
T cd05053 244 -------FKLLKEGYRMEKPQ----NCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDR 290 (293)
T ss_pred -------HHHHHcCCcCCCCC----CCCHHHHHHHHHHcccCcccCcCHHHHHHHHHH
Confidence 0000011 111111 223458899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-38 Score=331.68 Aligned_cols=251 Identities=22% Similarity=0.299 Sum_probs=198.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|+..+.||+|+||+||+|... +++.||+|++.............+.+|+.++..++||||+++++++.+++..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888999999999999999765 68999999987654334445677889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++......
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 81 EFLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred eCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 9999999999997653 478899999999999999999999 9999999999999999999999999998754321
Q ss_pred CC-----------------------------------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCC
Q 005864 561 SS-----------------------------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 605 (673)
Q Consensus 561 ~~-----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~ 605 (673)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 10 0113468999999999999999999999999999999999999
Q ss_pred CCcccccccccccccccccccccC--CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCC---HHHHHH
Q 005864 606 PRDFISLLSSSSSNMNLSLNEILD--PRLPLPSRNIQDKLISILEVALLCLEESPESRPT---MQTVCQ 669 (673)
Q Consensus 606 p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~v~~ 669 (673)
||........ ...+.. ..+..+... ..+.++.+++.+++ .||.+|++ ++|+++
T Consensus 235 Pf~~~~~~~~--------~~~i~~~~~~~~~p~~~--~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 235 PFCSETPQET--------YRKVMNWKETLVFPPEV--PISEKAKDLILRFC-TDSENRIGSNGVEEIKS 292 (360)
T ss_pred CCCCCCHHHH--------HHHHHcCCCceecCCCC--CCCHHHHHHHHHhc-cChhhcCCCCCHHHHhc
Confidence 9974322111 111111 111111111 12335777888876 49999985 566653
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-38 Score=315.57 Aligned_cols=254 Identities=24% Similarity=0.412 Sum_probs=202.5
Q ss_pred cCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
.+|...+.||+|+||.||+|.. .++..+|+|.+.... ......+.+|+++++.++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP 81 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC---HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence 4677889999999999999953 246689999876532 2345689999999999999999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCC------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC
Q 005864 476 SFLVYECLERGSLAEILSNDGS------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 543 (673)
.++++||+++|+|.+++...+. ...+++.++..++.|++.|++|||+. +++||||||+||+++++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQG 158 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCC
Confidence 9999999999999999976432 13478999999999999999999999 99999999999999999
Q ss_pred CceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccc
Q 005864 544 YEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNM 620 (673)
Q Consensus 544 ~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~ 620 (673)
+.+||+|||++..+..... ......+++.|+|||++.+..++.++|||||||++|||++ |..||......+.
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~----- 233 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA----- 233 (280)
T ss_pred CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH-----
Confidence 9999999999976543221 1122334678999999998899999999999999999998 8999853222111
Q ss_pred ccccccccCCC-CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 621 NLSLNEILDPR-LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 621 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
........ ...+ ...+..+.+++.+||+.||.+||+++|+.+.|++
T Consensus 234 ---~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 234 ---IECITQGRELERP----RTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred ---HHHHHcCccCCCC----CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 11111111 1111 1233458899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-38 Score=315.35 Aligned_cols=259 Identities=24% Similarity=0.343 Sum_probs=199.3
Q ss_pred CCccceeccCCcEEEEEEEe-----CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--Cee
Q 005864 404 FDAEQCIGIGGQASVYRGEL-----PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHS 476 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 476 (673)
|...+.||+|+||+||++.. .+++.||+|.++.... ......+.+|++++++++||||+++++++... ...
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG--QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 47889999999999988642 3688999999865422 22456788999999999999999999998653 467
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||+++|+|.+++... .+++.++..++.|++.|++|||+. +++||||||+||++++++.++|+|||++..
T Consensus 84 ~lv~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred EEEecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccc
Confidence 8999999999999999764 389999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccc-cccc-----cccccccccc
Q 005864 557 LKPGSSN---WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLL-SSSS-----SNMNLSLNEI 627 (673)
Q Consensus 557 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~~-----~~~~~~~~~~ 627 (673)
....... .....++..|+|||.+.+..++.++||||||+++|||++|..||...... .... ........+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred cCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhh
Confidence 6443221 11233566799999998888999999999999999999999997632210 0000 0000011111
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+.....+ .....+.++.+++..||+.+|++|||+++++++|++
T Consensus 237 ~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~ 280 (283)
T cd05080 237 LERGMRLP--CPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKE 280 (283)
T ss_pred hhcCCCCC--CCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 11111111 111234569999999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-38 Score=315.47 Aligned_cols=253 Identities=25% Similarity=0.396 Sum_probs=200.1
Q ss_pred HHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecC---
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHP--- 473 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~--- 473 (673)
.+.+.|+..+.||+|+||.||+|... +++.||+|.+.... .....+.+|+.++.++ +||||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~ 78 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 78 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC
Confidence 35677888999999999999999764 68899999986432 1245678899999998 799999999998653
Q ss_pred ---CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEec
Q 005864 474 ---RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSD 550 (673)
Q Consensus 474 ---~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 550 (673)
...++||||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++|+|
T Consensus 79 ~~~~~~~iv~e~~~~~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~D 154 (272)
T cd06637 79 GMDDQLWLVMEFCGAGSVTDLIKNTKG-NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 154 (272)
T ss_pred CCCcEEEEEEEcCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEcc
Confidence 457899999999999999986432 4588999999999999999999999 999999999999999999999999
Q ss_pred ccceeecCCCCCCceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccc
Q 005864 551 FGIAKFLKPGSSNWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625 (673)
Q Consensus 551 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 625 (673)
||++..............|+..|+|||++. ...++.++||||+||++|||++|+.||........... ..
T Consensus 155 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~-----~~ 229 (272)
T cd06637 155 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL-----IP 229 (272)
T ss_pred CCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHH-----Hh
Confidence 999987654333444567889999999886 34578899999999999999999999864322111100 00
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........ ....+.++.+++.+||..+|.+|||+.|+++
T Consensus 230 ~~~~~~~~-----~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 230 RNPAPRLK-----SKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred cCCCCCCC-----CCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 00001111 1123346889999999999999999999975
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-38 Score=310.39 Aligned_cols=246 Identities=26% Similarity=0.399 Sum_probs=195.3
Q ss_pred eeccCCcEEEEEEEe---CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 409 CIGIGGQASVYRGEL---PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 409 ~ig~G~~g~vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
.||+|+||.||+|.+ ++++.+|+|+++... .+....+++..|+.+++.++||||+++++++. .+..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN-NDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC-CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCC
Confidence 589999999999965 357889999886442 23345678999999999999999999999885 4567899999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCc-
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW- 564 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~- 564 (673)
|+|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||++..+.......
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 80 GPLNKFLQKNK---HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 99999997643 478899999999999999999999 99999999999999999999999999998764433221
Q ss_pred --eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 565 --TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 565 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
....++..|+|||.+....++.++||||||+++|||++ |+.||......+. ....... ...+.+. .
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-----~~~i~~~--~~~~~~~----~ 222 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEV-----TQMIESG--ERMECPQ----R 222 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHHCC--CCCCCCC----C
Confidence 12233578999999988889999999999999999998 9999874322110 0001100 0111121 2
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+.++.+++.+||+.||++||++++|++.|++
T Consensus 223 ~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 223 CPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 34568899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=311.45 Aligned_cols=253 Identities=28% Similarity=0.486 Sum_probs=202.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CC---CEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SG---EVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
++|+..+.||+|+||.||+|..+ ++ ..+|+|.+.... .....+.+..|++++.+++|||++++.+++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY--TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC--CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 46788899999999999999764 33 379999886542 2234567899999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++++|.+++.... ..+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++|||++...
T Consensus 83 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 83 IITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred EEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceec
Confidence 9999999999999997643 4588999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCCCc-e--ecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CC
Q 005864 558 KPGSSNW-T--EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RL 632 (673)
Q Consensus 558 ~~~~~~~-~--~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 632 (673)
....... . ....+..|+|||++.+..++.++||||||+++|||++ |+.||...... .....+... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~--------~~~~~i~~~~~~ 229 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH--------EVMKAINDGFRL 229 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH--------HHHHHHhcCCCC
Confidence 4332211 1 1223457999999988889999999999999999997 99998632211 111111111 11
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
+.+ .+.+.++.+++.+||+.+|++||++.+|++.|++
T Consensus 230 ~~~----~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~ 266 (268)
T cd05063 230 PAP----MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK 266 (268)
T ss_pred CCC----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 111 1234568999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=308.88 Aligned_cols=253 Identities=24% Similarity=0.309 Sum_probs=207.8
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||.|+||.||.++. .+++.+++|.+...... ....+.+.+|++++++++|+||+++++++.+.+..+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS-EKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc-hhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 478889999999999999965 46899999988654322 2346678899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++.... ...+++.++..++.|+++|++|||+. +++|+||+|+||++++++.+||+|||++.......
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 80 YANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred ecCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 999999999998653 24578999999999999999999999 99999999999999999999999999998765444
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.......+++.|+|||...+..++.++||||||+++|||++|..||+..... .....+......... ..
T Consensus 156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~--------~~~~~~~~~~~~~~~---~~ 224 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL--------NLVVKIVQGNYTPVV---SV 224 (256)
T ss_pred ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCCCCCCc---cc
Confidence 3344567899999999998888899999999999999999999998643221 111122222222111 23
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQLL 671 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~~L 671 (673)
.+..+.+++.+||+.+|.+||++.++++.+
T Consensus 225 ~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 225 YSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred cCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 345688999999999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-38 Score=314.51 Aligned_cols=252 Identities=24% Similarity=0.406 Sum_probs=199.0
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCC----EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGE----VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
.+|+..+.||+|+||+||+|.+ ++|+ .||+|.+.... .....+++.+|+.++..++||||+++++++... ..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~ 83 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT--SPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TV 83 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC--CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-Cc
Confidence 5688889999999999999975 3454 48999886542 233456788999999999999999999999754 46
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++++||+++|+|.+++.... ..+++.++..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++.
T Consensus 84 ~l~~~~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 84 QLVTQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred EEEEEcCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceee
Confidence 79999999999999997643 3588999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCc--eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCC
Q 005864 557 LKPGSSNW--TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 557 ~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
........ ....++..|+|||...+..++.++|||||||++|||++ |..||+....... ....... ...+
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-----~~~~~~~--~~~~ 231 (279)
T cd05109 159 LDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI-----PDLLEKG--ERLP 231 (279)
T ss_pred cccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-----HHHHHCC--CcCC
Confidence 65332221 12234678999999988889999999999999999998 8999863221100 0000000 0111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+ ...+.++.+++.+||+.||++||++.++++.|+
T Consensus 232 ~~----~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~ 266 (279)
T cd05109 232 QP----PICTIDVYMIMVKCWMIDSECRPRFRELVDEFS 266 (279)
T ss_pred CC----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11 123446889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-38 Score=322.13 Aligned_cols=254 Identities=22% Similarity=0.289 Sum_probs=199.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+++.. +++.||+|.+...........+.+.+|+.++..++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46889999999999999999765 68999999987543334445667889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 9999999999997643 3478889999999999999999999 9999999999999999999999999999876443
Q ss_pred CCC-ceeccccccccccccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC--CCC
Q 005864 561 SSN-WTEFAGTFGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD--PRL 632 (673)
Q Consensus 561 ~~~-~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~ 632 (673)
... .....||+.|+|||++.. ..++.++||||+||++|||++|+.||......+.. ..+.. ...
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~--------~~i~~~~~~~ 227 (331)
T cd05597 156 GTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETY--------GKIMNHKEHF 227 (331)
T ss_pred CCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHH--------HHHHcCCCcc
Confidence 322 233568999999999863 45788999999999999999999998743221111 11111 111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCC--CCCCHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPE--SRPTMQTVCQ 669 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~--~Rps~~~v~~ 669 (673)
..+. .....+..+.+++.+|+..+++ .||+++++++
T Consensus 228 ~~~~-~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~ 265 (331)
T cd05597 228 QFPP-DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKD 265 (331)
T ss_pred cCCC-ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 1111 1112344578888887765443 3789998875
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=317.78 Aligned_cols=256 Identities=22% Similarity=0.363 Sum_probs=203.5
Q ss_pred hcCCCccceeccCCcEEEEEEEe--------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL--------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCS 471 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 471 (673)
..+|.+.+.||+|+||.||+|+. .++..||+|.+.... .....+.+.+|+.++..+ +||||+++++++.
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc--chHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 45788899999999999999964 134579999886532 223457789999999999 8999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCC-------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCe
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGS-------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNV 538 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 538 (673)
..+..++||||+++|+|.+++..... ...+++.++..++.|+++||+|||+. +++||||||+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 168 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNV 168 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceE
Confidence 99999999999999999999976421 23578899999999999999999999 999999999999
Q ss_pred EeCCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccc
Q 005864 539 LLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSS 615 (673)
Q Consensus 539 ll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~ 615 (673)
++++++.+||+|||+++.+...... .....+++.|+|||++.+..++.++||||||+++|||++ |..||......+.
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~ 248 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 248 (304)
T ss_pred EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence 9999999999999999876443221 122335678999999988889999999999999999998 7888764322111
Q ss_pred cccccccccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 616 SSSNMNLSLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 616 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+... ....+ ...+..+.+++.+||+.+|++|||+.|+++.|++
T Consensus 249 --------~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~ 295 (304)
T cd05101 249 --------FKLLKEGHRMDKP----ANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDR 295 (304)
T ss_pred --------HHHHHcCCcCCCC----CCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 0011111 11111 1234568899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=311.06 Aligned_cols=254 Identities=24% Similarity=0.372 Sum_probs=197.2
Q ss_pred CCccceeccCCcEEEEEEEeCC-CC--EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC------C
Q 005864 404 FDAEQCIGIGGQASVYRGELPS-GE--VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP------R 474 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 474 (673)
|.+.+.||+|+||.||+|...+ +. .||+|.++.... .....+.+..|++++..++||||+++++++... .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC-TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 3567889999999999997754 33 689998865422 233467889999999999999999999987432 2
Q ss_pred eeeEEEecccCCChHHHHhcCC---CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecc
Q 005864 475 HSFLVYECLERGSLAEILSNDG---SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 551 (673)
..++++||+++|+|.+++.... ....+++.....++.|++.|++|||+. +|+||||||+||++++++.+||+||
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 156 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADF 156 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCC
Confidence 4689999999999999885322 224578999999999999999999998 9999999999999999999999999
Q ss_pred cceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccccccc
Q 005864 552 GIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEIL 628 (673)
Q Consensus 552 g~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 628 (673)
|+++.+...... .....+++.|+|||+..+..++.++||||||+++|||++ |+.||......+. ...+.
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--------~~~~~ 228 (272)
T cd05075 157 GLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEI--------YDYLR 228 (272)
T ss_pred CcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH--------HHHHH
Confidence 999876433221 122345678999999998899999999999999999999 8889864322110 11111
Q ss_pred CC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 629 DP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 629 ~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.. ....+. ..+..+.+++.+||+.||++|||+.++++.|++
T Consensus 229 ~~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 229 QGNRLKQPP----DCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred cCCCCCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 11 111111 223458899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=312.86 Aligned_cols=262 Identities=26% Similarity=0.376 Sum_probs=200.0
Q ss_pred cCCCccceeccCCcEEEEEEEe-----CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--CC
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-----PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH--PR 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~ 474 (673)
..|++.+.||+|+||+||+|.. .+++.||+|.+.... ....+.+.+|++++.+++||||+++++++.. ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST---AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC---HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence 4688889999999999999964 358899999986542 2345778999999999999999999998754 34
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++|+||+++|+|.+++...+ ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||++
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~ 155 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLT 155 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCccc
Confidence 6789999999999999997643 3588999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCc---eecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccc--cccccccc-----ccc
Q 005864 555 KFLKPGSSNW---TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLL--SSSSSNMN-----LSL 624 (673)
Q Consensus 555 ~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~~~~-----~~~ 624 (673)
.......... ....++..|+|||+..+..++.++||||||+++|||++|..|+...... ........ ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 156 KVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred ccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence 8764433211 1122345699999998888999999999999999999988775422111 00000000 000
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 625 NEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+.+......+ .....+.++.+++.+||+.+|++|||++|+++.|++
T Consensus 236 ~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05081 236 IELLKNNGRLP--APPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEA 282 (284)
T ss_pred HHHHhcCCcCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence 01111111111 111233468999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=317.48 Aligned_cols=254 Identities=30% Similarity=0.459 Sum_probs=202.2
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|++++.||+|+||+||+++.. +++.||+|.+........ ......+|+.++++++||||+++++++.+....++||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEE-EREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHH-HHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccccccc-ccchhhhhhhccccccccccccccccccccccccccccc
Confidence 567899999999999999776 467899999987644332 233445699999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++++|.+++... ..+++..+..++.|+++||++||+. +++|+||||+||++++++.++|+|||.+........
T Consensus 80 ~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~ 153 (260)
T PF00069_consen 80 CPGGSLQDYLQKN---KPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNE 153 (260)
T ss_dssp ETTEBHHHHHHHH---SSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTS
T ss_pred ccccccccccccc---ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 9999999999833 4589999999999999999999999 999999999999999999999999999987533344
Q ss_pred Cceecccccccccccccc-cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 563 NWTEFAGTFGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
......++..|+|||.+. +..++.++||||+|+++|+|++|..||........ .....+...............
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 228 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQ-----LEIIEKILKRPLPSSSQQSRE 228 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHH-----HHHHHHHHHTHHHHHTTSHTT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhh-----hhhhhhcccccccccccccch
Confidence 445567899999999998 88899999999999999999999999874411110 000111110000000000001
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.+++.+||+.||++||++.++++
T Consensus 229 ~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 229 KSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp SHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred hHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1256999999999999999999999985
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=310.51 Aligned_cols=256 Identities=23% Similarity=0.286 Sum_probs=199.1
Q ss_pred HHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
.+++.+.....||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.+++.++|+||+++++++..++..+
T Consensus 5 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 5 YEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD---SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred cccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC---HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 34556666788999999999999754 67889999876542 223567899999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-CCceEEecccceee
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-EYEARVSDFGIAKF 556 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~ 556 (673)
+|+||+++++|.+++.........++..+..++.|++.|++|||+. +|+||||||+||+++. ++.++|+|||.+..
T Consensus 82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 9999999999999998643211127788889999999999999999 9999999999999976 67899999999987
Q ss_pred cCCCCCCceecccccccccccccccCC--cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCC
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
............+++.|+|||++.+.. ++.++||||||+++|+|++|+.||........ ...........+
T Consensus 159 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~------~~~~~~~~~~~~- 231 (268)
T cd06624 159 LAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA------AMFKVGMFKIHP- 231 (268)
T ss_pred cccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh------hHhhhhhhccCC-
Confidence 644333334456789999999986543 78899999999999999999999863211000 000000000101
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........++.+++.+||+.+|++|||+.|+++
T Consensus 232 --~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 232 --EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred --CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 111223456889999999999999999999986
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=312.65 Aligned_cols=254 Identities=29% Similarity=0.493 Sum_probs=202.2
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CC---CEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SG---EVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
..|++.+.||+|+||.||+|... ++ ..||+|.+.... .....++|..|+.+++.++||||+++++++..++..+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceE
Confidence 34778899999999999999764 23 369999986542 2334678999999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+|+||+++|+|.+++.... ..+++.++..++.|++.|++|||+. +++|+||||+||+++.++.++++|||++...
T Consensus 82 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 82 IITEFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred EEEecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCcccccc
Confidence 9999999999999997653 3588999999999999999999999 9999999999999999999999999998765
Q ss_pred CCCCCCc--ee-cc--cccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCC
Q 005864 558 KPGSSNW--TE-FA--GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPR 631 (673)
Q Consensus 558 ~~~~~~~--~~-~~--~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
....... .. .. .+..|+|||++.+..++.++||||||+++||+++ |..||......+. ...... +..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~-----~~~i~~--~~~ 229 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV-----INAIEQ--DYR 229 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHH-----HHHHHc--CCc
Confidence 4322211 11 11 2457999999998899999999999999999886 9999864322110 000000 111
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+.+ .+.+..+.+++.+||+.+|.+||+++++++.|++
T Consensus 230 ~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 267 (269)
T cd05065 230 LPPP----MDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDK 267 (269)
T ss_pred CCCc----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 2222 1234568899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-37 Score=315.46 Aligned_cols=262 Identities=20% Similarity=0.260 Sum_probs=200.1
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|++.+.||+|++|.||+|... +|+.||+|++...... ....+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE-EGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEecccccc-CCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 4778899999999999999765 6899999998654222 2234678889999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|++ ++|.+++........+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 998 58999987654445689999999999999999999999 99999999999999999999999999998664433
Q ss_pred CCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccc-------cccccccc---cc--c
Q 005864 562 SNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS-------SNMNLSLN---EI--L 628 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-------~~~~~~~~---~~--~ 628 (673)
.......+++.|+|||.+.+. .++.++||||||+++|||++|+.||.......... ......+. .. .
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDY 235 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHH
Confidence 333344568899999987654 47889999999999999999999986432111000 00000000 00 0
Q ss_pred CCCCCC-----CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 629 DPRLPL-----PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 629 ~~~~~~-----~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+. ........+.++.+++.+||+.||++|||+.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 236 KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000000 00001123456789999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=314.72 Aligned_cols=249 Identities=25% Similarity=0.391 Sum_probs=203.6
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|++.+.||+|+||.||+|.. .+|+.||+|.+..... ...+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence 6789999999999999999976 4799999999865322 23466889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++... .+++.++..++.|++.||.|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 96 e~~~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~ 168 (297)
T cd06656 96 EYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (297)
T ss_pred cccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCC
Confidence 999999999998653 368889999999999999999999 9999999999999999999999999999876554
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........+++.|+|||...+..++.++||||||+++|++++|+.||........ .........+ ......
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~--------~~~~~~~~~~-~~~~~~ 239 (297)
T cd06656 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--------LYLIATNGTP-ELQNPE 239 (297)
T ss_pred ccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh--------eeeeccCCCC-CCCCcc
Confidence 4333445688899999999988899999999999999999999999864322111 0000000000 001112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+..+.+++.+||+.+|++||+++++++
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 240 RLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 33455889999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-38 Score=319.36 Aligned_cols=256 Identities=23% Similarity=0.354 Sum_probs=201.4
Q ss_pred hcCCCccceeccCCcEEEEEEEeC--------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP--------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCS 471 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 471 (673)
.++|.+.+.||+|+||.||+|... ++..+|+|.++... ......++..|++++..+ +||||+++++++.
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC--ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 356889999999999999999652 23579999987542 223356788899999999 7999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCC-------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCe
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGS-------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNV 538 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 538 (673)
..+..++||||+++|+|.+++..... ...+++.++..++.|++.||+|||+. +++||||||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 171 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 171 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHhe
Confidence 99999999999999999999976432 13488999999999999999999998 999999999999
Q ss_pred EeCCCCceEEecccceeecCCCCCCc--eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccc
Q 005864 539 LLSSEYEARVSDFGIAKFLKPGSSNW--TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSS 615 (673)
Q Consensus 539 ll~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~ 615 (673)
++++++.+||+|||.+.......... ....+++.|+|||++.+..++.++|||||||++|||++ |..||......+.
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~ 251 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 251 (307)
T ss_pred EEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 99999999999999987654322111 11223468999999988889999999999999999998 8888763221100
Q ss_pred cccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 616 SSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...... ......+ ...+.++.+++.+||+.+|++|||+.+|++.|+
T Consensus 252 -----~~~~~~--~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~ 297 (307)
T cd05098 252 -----FKLLKE--GHRMDKP----SNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 297 (307)
T ss_pred -----HHHHHc--CCCCCCC----CcCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 000000 0011111 123456889999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=311.13 Aligned_cols=254 Identities=23% Similarity=0.377 Sum_probs=200.3
Q ss_pred CCccceeccCCcEEEEEEEeCC----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe----
Q 005864 404 FDAEQCIGIGGQASVYRGELPS----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH---- 475 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 475 (673)
|.+.+.||+|+||.||+|.... +..||+|+++..... ......+.+|++.++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT-YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 5678899999999999997642 468999998754222 3345678999999999999999999999866544
Q ss_pred --eeEEEecccCCChHHHHhcCC---CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEec
Q 005864 476 --SFLVYECLERGSLAEILSNDG---SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSD 550 (673)
Q Consensus 476 --~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 550 (673)
.++++||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECC
Confidence 789999999999999985432 224588999999999999999999999 999999999999999999999999
Q ss_pred ccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccc
Q 005864 551 FGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEI 627 (673)
Q Consensus 551 fg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~ 627 (673)
||+++.+...... .....++..|+|||++.+..++.++||||||+++|||++ |..||......+ .....
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~--------~~~~~ 228 (273)
T cd05035 157 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE--------IYDYL 228 (273)
T ss_pred ccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHH
Confidence 9999876443221 112334678999999988889999999999999999999 889886432211 11111
Q ss_pred cCCC-CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 628 LDPR-LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 628 ~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.... ...+ ...+.++.+++.+||+.||++|||+.|+++.|++
T Consensus 229 ~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~ 271 (273)
T cd05035 229 RHGNRLKQP----EDCLDELYDLMYSCWRADPKDRPTFTKLREVLEN 271 (273)
T ss_pred HcCCCCCCC----cCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 1111 1111 1234568999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=308.87 Aligned_cols=253 Identities=25% Similarity=0.481 Sum_probs=205.7
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.++|.+.+.||+|+||.||+|..++++.||||.+..... ..+++.+|+.++++++|||++++++++..+...++||
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM----SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc----CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence 467889999999999999999888888999999875322 2467889999999999999999999999889999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++|+||+|+||++++++.++++|||.+......
T Consensus 81 e~~~~~~L~~~i~~~~~-~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 81 EYMSKGSLLDFLKSGEG-KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred eccCCCCHHHHHhcccc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 99999999999976532 4589999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCCCCCc
Q 005864 561 SSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPSR 637 (673)
Q Consensus 561 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 637 (673)
... ......+..|+|||.+.+..++.++||||+|+++||+++ |+.||...... .....+... ..+.+.
T Consensus 157 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~- 227 (261)
T cd05034 157 EYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--------EVLEQVERGYRMPRPP- 227 (261)
T ss_pred hhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--------HHHHHHHcCCCCCCCC-
Confidence 111 112234568999999998889999999999999999998 99998632211 111111111 111111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+.++.+++.+|+..+|++||+++++.+.|+.
T Consensus 228 ---~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 228 ---NCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ---CCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 124468999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=307.85 Aligned_cols=249 Identities=28% Similarity=0.465 Sum_probs=200.2
Q ss_pred ceeccCCcEEEEEEEeCC--CC--EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecc
Q 005864 408 QCIGIGGQASVYRGELPS--GE--VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~--~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
+.||+|++|.||+|.+.+ ++ .||+|.+...... ...+.+.+|+.++++++||||+++++++.. ...++|+||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 468999999999997643 33 6999998765433 457789999999999999999999999988 8899999999
Q ss_pred cCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC
Q 005864 484 ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN 563 (673)
Q Consensus 484 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 563 (673)
++|+|.+++..... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||++.........
T Consensus 78 ~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 78 PLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred CCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 99999999987643 4689999999999999999999999 9999999999999999999999999999876543221
Q ss_pred c---eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 564 W---TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 564 ~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
. ....++..|+|||++.+..++.++||||||+++|||++ |+.||......+... .... .......+
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~-----~~~~-~~~~~~~~---- 223 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILK-----KIDK-EGERLERP---- 223 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHH-----HHHh-cCCcCCCC----
Confidence 1 12346788999999998899999999999999999998 999986332211100 0000 01111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+||+.+|++||++.++++.|.+
T Consensus 224 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 257 (257)
T cd05040 224 EACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257 (257)
T ss_pred ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence 1234568899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=322.82 Aligned_cols=245 Identities=25% Similarity=0.419 Sum_probs=202.8
Q ss_pred ccceeccCCcEEEEEEEeC--CCC--EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 406 AEQCIGIGGQASVYRGELP--SGE--VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 406 ~~~~ig~G~~g~vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
..+.||+|+||.|++|.|. +|+ .||||.+....... ....|.+|+.+|.+++|||++++||+..+ ....+|||
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~E 190 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFE 190 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhh
Confidence 4577999999999999774 455 58999987654332 57899999999999999999999999987 67889999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
.++.|+|.+.|++ .....|-......++.|||.||.||..+ ++|||||..+|+++-....|||+|||+++-+....
T Consensus 191 LaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne 266 (1039)
T KOG0199|consen 191 LAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGENE 266 (1039)
T ss_pred hcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence 9999999999998 3346688888889999999999999999 99999999999999999999999999999886554
Q ss_pred CCce---ecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccC--CCCCCC
Q 005864 562 SNWT---EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILD--PRLPLP 635 (673)
Q Consensus 562 ~~~~---~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 635 (673)
..+. ...-.+.|+|||.+....++.+||||+|||++|||+| |+.||-+...... -+.+| .+++.+
T Consensus 267 d~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qI---------L~~iD~~erLpRP 337 (1039)
T KOG0199|consen 267 DMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQI---------LKNIDAGERLPRP 337 (1039)
T ss_pred cceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHH---------HHhccccccCCCC
Confidence 4432 2334678999999999999999999999999999998 8889865433221 11222 234444
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
. .+++.++++++.||..+|++|||+..+.+.
T Consensus 338 k----~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 338 K----YCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred C----CChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 3 345569999999999999999999999743
|
|
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=308.10 Aligned_cols=250 Identities=29% Similarity=0.450 Sum_probs=203.9
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.++|++.+.||.|+||.||+|... |+.||+|.+..... ..+++.+|+.++.+++|+||+++++++...+..++||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 79 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEE
Confidence 357888999999999999999874 88999999875432 4677899999999999999999999999889999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++..... ..+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||.++.....
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 80 EYMAKGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred EecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccccccccc
Confidence 99999999999976542 3589999999999999999999999 9999999999999999999999999999866322
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.. ....+..|+|||++.++.++.++||||||+++||+++ |..||......+. ...... +.+...+
T Consensus 156 ~~---~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-----~~~~~~--~~~~~~~---- 221 (256)
T cd05039 156 QD---SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV-----VPHVEK--GYRMEAP---- 221 (256)
T ss_pred cc---cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHH-----HHHHhc--CCCCCCc----
Confidence 11 2334568999999988889999999999999999997 9999863321110 000000 0011111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+||..+|++|||+.+++++|.+
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 222 EGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred cCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 1234568899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=310.19 Aligned_cols=253 Identities=24% Similarity=0.341 Sum_probs=190.5
Q ss_pred ceeccCCcEEEEEEEeCC---CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEeccc
Q 005864 408 QCIGIGGQASVYRGELPS---GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLE 484 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 484 (673)
+.||+|+||.||+|...+ +..+|+|.+..... ......+.+|+.++++++||||+++++++.+....++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 78 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS--VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCP 78 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCC
Confidence 358999999999997643 45799998765432 2234578899999999999999999999999999999999999
Q ss_pred CCChHHHHhcCCC--CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 485 RGSLAEILSNDGS--IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 485 ~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+|+|.+++..... ....++..+..++.|++.|++|||+. +++|+||||+||+++.++.+|++|||++........
T Consensus 79 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~ 155 (269)
T cd05087 79 LGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY 155 (269)
T ss_pred CCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCcce
Confidence 9999999975432 23467788889999999999999999 999999999999999999999999999875432221
Q ss_pred --CceecccccccccccccccC-------CcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCC
Q 005864 563 --NWTEFAGTFGYVAPELAYTM-------KVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRL 632 (673)
Q Consensus 563 --~~~~~~~~~~y~aPE~~~~~-------~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (673)
......++..|+|||++... .++.++||||||+++|||++ |+.||......+...............+..
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (269)
T cd05087 156 YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRL 235 (269)
T ss_pred eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCcc
Confidence 11234567889999987532 35789999999999999996 999986432211100000000001111111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
. ...+..+.+++..|| .+|++|||++||++.|+
T Consensus 236 ~------~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 236 K------LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred C------CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1 112334778999999 68999999999999885
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=314.98 Aligned_cols=254 Identities=26% Similarity=0.440 Sum_probs=205.7
Q ss_pred HhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeeeE
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 478 (673)
....|++.+.||.||.+.||++...+.+.||+|++.... .+.....-|..|+..|.+++ |.+||++++|-..++..|+
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~-~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLE-ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhh-cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 346788999999999999999999888999999876543 34456788999999999994 9999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
||||-+ .+|..+|++... ....| .+..+.+|++.|+.+.|++ ||||.||||.|+++-. |.+||+|||.|..+.
T Consensus 438 vmE~Gd-~DL~kiL~k~~~-~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 438 VMECGD-IDLNKILKKKKS-IDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLVK-GRLKLIDFGIANAIQ 510 (677)
T ss_pred Eeeccc-ccHHHHHHhccC-CCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEEe-eeEEeeeechhcccC
Confidence 999754 499999988753 22344 6788999999999999999 9999999999999984 699999999999887
Q ss_pred CCCCC--ceecccccccccccccccCC-----------cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccc
Q 005864 559 PGSSN--WTEFAGTFGYVAPELAYTMK-----------VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625 (673)
Q Consensus 559 ~~~~~--~~~~~~~~~y~aPE~~~~~~-----------~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 625 (673)
++... ...-+||+.||+||.+.... .+.++||||+|||+|+|+.|+.||..... ....+.
T Consensus 511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-------~~aKl~ 583 (677)
T KOG0596|consen 511 PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-------QIAKLH 583 (677)
T ss_pred ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-------HHHHHH
Confidence 76543 24568999999999986432 55789999999999999999999974431 223455
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.++.-..+....... .++.++++.||+.||++|||..++++
T Consensus 584 aI~~P~~~Iefp~~~~~-~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 584 AITDPNHEIEFPDIPEN-DELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred hhcCCCccccccCCCCc-hHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 56666432222111111 12889999999999999999999985
|
|
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-38 Score=318.78 Aligned_cols=254 Identities=23% Similarity=0.378 Sum_probs=198.7
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCC--EEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGE--VVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 476 (673)
.++|++.+.||+|+||.||+|.+. +|. .+|+|.++... .....+.+.+|++++.++ +||||+++++++..++..
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 83 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC--CHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence 357888999999999999999764 454 45777765432 223457788999999999 899999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCC-------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC
Q 005864 477 FLVYECLERGSLAEILSNDGS-------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 543 (673)
++|+||+++|+|.++++..+. ...+++.++..++.|++.|++|||+. +++||||||+||+++++
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 160 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCC
Confidence 999999999999999975431 13578999999999999999999999 99999999999999999
Q ss_pred CceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccc
Q 005864 544 YEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNL 622 (673)
Q Consensus 544 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~ 622 (673)
+.+||+|||++....... ......++..|+|||++.+..++.++|||||||++|||+| |..||......+.
T Consensus 161 ~~~kl~dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~------- 232 (303)
T cd05088 161 YVAKIADFGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL------- 232 (303)
T ss_pred CcEEeCccccCcccchhh-hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHH-------
Confidence 999999999986332111 1111234567999999988889999999999999999998 9999863321110
Q ss_pred ccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 623 SLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 623 ~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+... ....+ ...+.++.+++.+||+.+|++||+++++++.|+
T Consensus 233 -~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~ 278 (303)
T cd05088 233 -YEKLPQGYRLEKP----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLN 278 (303)
T ss_pred -HHHHhcCCcCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 0011010 11111 122346889999999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=312.83 Aligned_cols=251 Identities=21% Similarity=0.342 Sum_probs=201.3
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+.|++.+.||+|+||.||+|... +++.|++|.+... .....+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI 88 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence 56889999999999999999775 5899999998653 2334677889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|..++.+.. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 89 e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 163 (292)
T cd06644 89 EFCPGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT 163 (292)
T ss_pred ecCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceecccc
Confidence 9999999998886543 3588999999999999999999999 9999999999999999999999999998765433
Q ss_pred CCCceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC
Q 005864 561 SSNWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
........++..|+|||++. ...++.++|||||||++|||++|+.||......+.. ........+....
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~- 237 (292)
T cd06644 164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL-----LKIAKSEPPTLSQ- 237 (292)
T ss_pred ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHH-----HHHhcCCCccCCC-
Confidence 33334556888999999884 345688999999999999999999998643221100 0000000111111
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.++.+++.+||+.+|++||++.|+++
T Consensus 238 ---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 238 ---PSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ---CcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 1123446889999999999999999999975
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=308.73 Aligned_cols=253 Identities=22% Similarity=0.385 Sum_probs=203.9
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.++|++.+.||+|+||.||+|...++..+|+|.+.... ...+.+.+|++++++++|+||+++++++.. ...+++|
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~ 79 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 79 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh----hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence 46788999999999999999988788889999876432 235678899999999999999999999887 7789999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++.... ...+++.++..++.|++.|+.|||+. +++|+||+|+||+++.++.+|++|||.+......
T Consensus 80 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 80 EFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EeCCCCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 9999999999997643 24578899999999999999999998 9999999999999999999999999999765432
Q ss_pred CCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 561 SSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 561 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
... .....++..|+|||++....++.++|+||||+++|++++ |+.||........ .+.+......+ .
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~---------~~~~~~~~~~~--~ 224 (260)
T cd05073 156 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV---------IRALERGYRMP--R 224 (260)
T ss_pred CcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHH---------HHHHhCCCCCC--C
Confidence 221 122345678999999988889999999999999999999 8999864321110 00111111111 1
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....+.++.+++.+||+.+|++||++.++.+.|+.
T Consensus 225 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 225 PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred cccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 12334568899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-38 Score=324.66 Aligned_cols=243 Identities=22% Similarity=0.227 Sum_probs=191.0
Q ss_pred eccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc---CCCcccceeeeeecCCeeeEEEecccC
Q 005864 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI---RHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 410 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
||+|+||+||+|+.. +|+.||||++.............+..|..++... +||||+++++++.+++..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999765 6899999998654333333345556677777665 699999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|+|.+++... ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.++|+|||++...........
T Consensus 81 g~L~~~l~~~---~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~ 154 (330)
T cd05586 81 GELFWHLQKE---GRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTN 154 (330)
T ss_pred ChHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCcc
Confidence 9999998765 3478899999999999999999999 999999999999999999999999999875433333344
Q ss_pred ecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHH
Q 005864 566 EFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLI 644 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (673)
...||+.|+|||++.+. .++.++||||+||++|||++|+.||...... .....+.......+.. ..+.
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~--------~~~~~i~~~~~~~~~~---~~~~ 223 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ--------QMYRNIAFGKVRFPKN---VLSD 223 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH--------HHHHHHHcCCCCCCCc---cCCH
Confidence 56789999999998754 4789999999999999999999998643211 1111222222222211 1234
Q ss_pred HHHHHHHHcccCCCCCCC----CHHHHHH
Q 005864 645 SILEVALLCLEESPESRP----TMQTVCQ 669 (673)
Q Consensus 645 ~l~~li~~cl~~dp~~Rp----s~~~v~~ 669 (673)
++.+++.+||+.||.+|| ++.|+++
T Consensus 224 ~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 224 EGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred HHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 578899999999999998 5666554
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-37 Score=308.85 Aligned_cols=249 Identities=26% Similarity=0.405 Sum_probs=204.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
..|+..+.||+|+||.||+|.+. +++.||+|.+..... ......+.+|+.++++++||||+++++++.++...++||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM 81 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 35777889999999999999765 588999998865422 234678899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++... .+++.+...++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++......
T Consensus 82 e~~~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06640 82 EYLGGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDT 154 (277)
T ss_pred ecCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCC
Confidence 999999999998753 378888999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........++..|+|||++.+..++.++||||||+++|||++|+.||........ . ....... +.....
T Consensus 155 ~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--------~-~~~~~~~--~~~~~~ 223 (277)
T cd06640 155 QIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV--------L-FLIPKNN--PPTLTG 223 (277)
T ss_pred ccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH--------h-hhhhcCC--CCCCch
Confidence 3333445678899999999888899999999999999999999999864322110 0 0011010 112233
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
..+..+.+++.+||+.+|++||++.++++.
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 224 EFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 456679999999999999999999999753
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=315.33 Aligned_cols=249 Identities=26% Similarity=0.403 Sum_probs=202.9
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|++.+.||.|++|.||+|.. .+|+.|++|.+.... ....+.+.+|+..++.++|||++++++++..++..++|+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK---QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc---CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 4688999999999999999965 579999999886532 223567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++... .+++.++..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 96 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 96 EYLAGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE 168 (296)
T ss_pred EecCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccc
Confidence 999999999998653 478999999999999999999999 9999999999999999999999999998866544
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........++..|+|||.+.+..++.++|||||||++|+|++|+.||......+... .......+.+..+ .
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~-----~~~~~~~~~~~~~----~ 239 (296)
T cd06655 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-----LIATNGTPELQNP----E 239 (296)
T ss_pred cccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----HHHhcCCcccCCc----c
Confidence 333334567889999999988889999999999999999999999987543211100 0000000111111 1
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+..+.+++.+||..||++||++.++++
T Consensus 240 ~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 240 KLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred cCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 23345889999999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=310.83 Aligned_cols=248 Identities=26% Similarity=0.424 Sum_probs=203.8
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|++.+.||.|++|.||+|... +++.||+|.+.... .......+.+|+++++.++|||++++++++.++...++|+|
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE--AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc--cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence 5788899999999999999765 68999999986542 22345678899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++++|||+++......
T Consensus 80 ~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 80 YCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred eeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 99999999999764 588999999999999999999999 99999999999999999999999999998876543
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.......++..|+|||++.+..++.++||||||+++|||++|+.||......... ........+... . ..
T Consensus 153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~-----~~~~~~~~~~~~---~--~~ 222 (274)
T cd06609 153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVL-----FLIPKNNPPSLE---G--NK 222 (274)
T ss_pred cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHH-----HHhhhcCCCCCc---c--cc
Confidence 3344556788999999999888999999999999999999999998643211100 000000011111 0 01
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+..+.+++.+||..+|++|||++++++
T Consensus 223 ~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 223 FSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred cCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 3456889999999999999999999975
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=312.56 Aligned_cols=249 Identities=22% Similarity=0.331 Sum_probs=198.4
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|++.+.||+|+||.||+|... ++..+++|.+.... ....+.+.+|+++++.++|||++++++++..++..++|+||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC---HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 567788999999999999775 57788999875432 23466788999999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++++|.+++.... ..+++..+..++.|++.||.|||+. +++||||+|+||+++.++.++++|||++........
T Consensus 84 ~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~ 158 (282)
T cd06643 84 CAGGAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ 158 (282)
T ss_pred cCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccccccccc
Confidence 99999999886532 4589999999999999999999999 999999999999999999999999999876543333
Q ss_pred Cceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 563 NWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
......++..|+|||++. +..++.++|||||||++|||++|+.||......+.... ......+....+
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~-----~~~~~~~~~~~~-- 231 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLK-----IAKSEPPTLAQP-- 231 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHH-----HhhcCCCCCCCc--
Confidence 334456889999999874 44577899999999999999999999874332111000 000001111111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+.++.+++.+||+.||.+||++.++++
T Consensus 232 --~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 232 --SRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred --cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 123456889999999999999999999975
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=310.66 Aligned_cols=252 Identities=24% Similarity=0.364 Sum_probs=199.5
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||+|+||.||+|.. .+++.||+|.++... ......+.+|+.+++.++||||+++++++..++..++|+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~ 85 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP---GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM 85 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc---hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence 4677788999999999999966 468999999986542 223456788999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++...+ .+++.++..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 86 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06645 86 EFCGGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITAT 159 (267)
T ss_pred eccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCc
Confidence 9999999999987653 478899999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 561 SSNWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
........|+..|+|||++. ...++.++||||+||++|||++|+.||............ .......+...
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~---~~~~~~~~~~~---- 232 (267)
T cd06645 160 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM---TKSNFQPPKLK---- 232 (267)
T ss_pred ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhh---hccCCCCCccc----
Confidence 33334557899999999874 455888999999999999999999997532211100000 00000000010
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+..+.+++.+||+.+|++||+++++++
T Consensus 233 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 233 DKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 01122345889999999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=321.10 Aligned_cols=255 Identities=24% Similarity=0.383 Sum_probs=198.7
Q ss_pred cCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecC-
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHP- 473 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~- 473 (673)
++|++.+.||+|+||.||+|.+ .+++.||||+++.... ....+.+.+|+.++.++ +||||+++++++...
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC--hHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 5789999999999999999963 3578999999875422 23356788999999999 689999999988654
Q ss_pred CeeeEEEecccCCChHHHHhcCCC--------------------------------------------------------
Q 005864 474 RHSFLVYECLERGSLAEILSNDGS-------------------------------------------------------- 497 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 497 (673)
...++||||+++|+|.+++.....
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 567899999999999999865321
Q ss_pred --------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC--Cceec
Q 005864 498 --------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS--NWTEF 567 (673)
Q Consensus 498 --------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~ 567 (673)
...+++..+..++.|+++|++|||+. +|+||||||+||++++++.+|++|||++........ .....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 241 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA 241 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCC
Confidence 12367888899999999999999999 999999999999999999999999999986533222 11223
Q ss_pred ccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccC-CCCCCCCcchHHHHHH
Q 005864 568 AGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILD-PRLPLPSRNIQDKLIS 645 (673)
Q Consensus 568 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 645 (673)
.++..|+|||.+.+..++.++||||||+++|||++ |..||........ ....... .....+. ..+.+
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-------~~~~~~~~~~~~~~~----~~~~~ 310 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-------FCRRLKEGTRMRAPD----YTTPE 310 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH-------HHHHHhccCCCCCCC----CCCHH
Confidence 45678999999988889999999999999999997 9999864321110 0000000 0111111 12345
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 646 ILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+.+++..||+.||++|||+.|+++.|+
T Consensus 311 ~~~~~~~cl~~~p~~Rps~~eil~~l~ 337 (343)
T cd05103 311 MYQTMLDCWHGEPSQRPTFSELVEHLG 337 (343)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 889999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=321.27 Aligned_cols=254 Identities=22% Similarity=0.275 Sum_probs=200.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+++.. +++.||+|.+.............+.+|+.++..++|+||+++++++.+++..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46889999999999999999765 68899999987643333344566889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 Ey~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999998643 3578888999999999999999999 9999999999999999999999999999876543
Q ss_pred CCC-ceeccccccccccccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC--CCC
Q 005864 561 SSN-WTEFAGTFGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD--PRL 632 (673)
Q Consensus 561 ~~~-~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~ 632 (673)
... .....|++.|+|||++.+ ..++.++|||||||++|||++|+.||......+. ...+.. .++
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~--------~~~i~~~~~~~ 227 (331)
T cd05624 156 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET--------YGKIMNHEERF 227 (331)
T ss_pred CceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHH--------HHHHHcCCCcc
Confidence 322 233568999999998865 4678899999999999999999999974322111 111111 111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPES--RPTMQTVCQ 669 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~~v~~ 669 (673)
+.+. .....+.++.+++.+|+..++.+ |++++++++
T Consensus 228 ~~p~-~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 228 QFPS-HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred cCCC-ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 2111 11233456888999999876544 468888764
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-37 Score=305.64 Aligned_cols=251 Identities=24% Similarity=0.314 Sum_probs=203.2
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec-CCeeeEEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH-PRHSFLVY 480 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ 480 (673)
+|++.+.||+|++|.||+|... +++.||+|++..... .....+.+.+|++++++++|||++++++.+.. +...++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA-SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 4788999999999999999765 578999999865322 22345678899999999999999999998764 44678999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++.... ...+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 80 GFCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred cccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 9999999999997643 24589999999999999999999999 9999999999999999999999999999877544
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........+++.|+|||+..+..++.++||||+|++++||++|+.||+...... .........++. ...
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~--------~~~~~~~~~~~~---~~~ 224 (257)
T cd08223 156 CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNS--------LVYRIIEGKLPP---MPK 224 (257)
T ss_pred CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH--------HHHHHHhcCCCC---Ccc
Confidence 344445668899999999999999999999999999999999999987432111 111111112211 112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.++.+++.+||+.+|++||++.++++
T Consensus 225 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 225 DYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred ccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 34456899999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=306.37 Aligned_cols=250 Identities=28% Similarity=0.452 Sum_probs=201.3
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.+|++.+.||+|+||.||+|.+.+++.+|+|.+...... ...+.+|++++++++|||++++++++......++|+|
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS----EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFE 79 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCC----HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEE
Confidence 467788999999999999998877889999988654322 3568899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++.... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 154 (256)
T cd05112 80 FMEHGCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ 154 (256)
T ss_pred cCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCc
Confidence 999999999997643 3478899999999999999999999 99999999999999999999999999998654322
Q ss_pred CC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCCCCCcc
Q 005864 562 SN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPSRN 638 (673)
Q Consensus 562 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 638 (673)
.. .....++.+|+|||++.++.++.++||||||+++|||++ |+.||......+ ....+... +...+.
T Consensus 155 ~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~-- 224 (256)
T cd05112 155 YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSE--------VVETINAGFRLYKPR-- 224 (256)
T ss_pred ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHH--------HHHHHhCCCCCCCCC--
Confidence 11 122334678999999988889999999999999999998 999986322110 00111000 111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+..+.+++.+||+.+|++|||+.++++.|.
T Consensus 225 --~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 225 --LASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred --CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 12346899999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=307.05 Aligned_cols=248 Identities=28% Similarity=0.454 Sum_probs=203.3
Q ss_pred ceeccCCcEEEEEEEeCC----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecc
Q 005864 408 QCIGIGGQASVYRGELPS----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
+.||+|+||.||+|.... +..|++|.++...... ..+.+.+|++.+..++|+|++++++++......++||||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 469999999999997753 8899999987653332 4678999999999999999999999999999999999999
Q ss_pred cCCChHHHHhcCCC------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 484 ERGSLAEILSNDGS------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 484 ~~gsL~~~l~~~~~------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
++++|.+++..... ...+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++++|||.+...
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 155 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSRDV 155 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccccc
Confidence 99999999987521 25689999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCC--CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCC
Q 005864 558 KPGS--SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLP 633 (673)
Q Consensus 558 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 633 (673)
.... .......++..|+|||.+....++.++||||+|+++|||++ |..||......+ ......+. ...
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~~ 227 (262)
T cd00192 156 YDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEE--------VLEYLRKGYRLP 227 (262)
T ss_pred ccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHH--------HHHHHHcCCCCC
Confidence 5432 22234557889999999988889999999999999999999 699987542211 11111111 111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+ ...+.++.+++.+||..+|++|||+.|+++.|+
T Consensus 228 ~~----~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 228 KP----EYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CC----ccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11 223456999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=320.60 Aligned_cols=254 Identities=21% Similarity=0.279 Sum_probs=199.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+++.+ +++.||+|.+.+...........+..|+.++..++|++|+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36889999999999999999775 57889999986543333344566889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 ey~~~g~L~~~l~~~~--~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred eccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 9999999999997643 3578889999999999999999999 9999999999999999999999999999765433
Q ss_pred CCC-ceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC--CC
Q 005864 561 SSN-WTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP--RL 632 (673)
Q Consensus 561 ~~~-~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~ 632 (673)
... .....||+.|+|||++. ...++.++|||||||++|||++|+.||......+. ...+... +.
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~--------~~~i~~~~~~~ 227 (332)
T cd05623 156 GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET--------YGKIMNHKERF 227 (332)
T ss_pred CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHH--------HHHHhCCCccc
Confidence 222 23356899999999886 34578899999999999999999999974332211 1111111 11
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPES--RPTMQTVCQ 669 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~~v~~ 669 (673)
+.+. .....+.++.+++.+|+..++.+ |++++|+++
T Consensus 228 ~~p~-~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~ 265 (332)
T cd05623 228 QFPA-QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQ 265 (332)
T ss_pred cCCC-ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhC
Confidence 1111 11223456888999988665544 689998875
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=309.75 Aligned_cols=251 Identities=22% Similarity=0.347 Sum_probs=198.0
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||+|+||.||+|.. .+++.||+|.+.... .....+.+.+|++++.+++||||+++++++..++..++|+|
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI--TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE 79 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC--ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence 578889999999999999965 478999999886532 22345678999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|..+. .+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~- 148 (279)
T cd06619 80 FMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS- 148 (279)
T ss_pred cCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceecccc-
Confidence 99999997652 367788889999999999999999 9999999999999999999999999999765432
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
......++..|+|||++.+..++.++||||||+++|||++|+.||........... .......+.+...+.. ....
T Consensus 149 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~ 224 (279)
T cd06619 149 -IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLM-PLQLLQCIVDEDPPVL--PVGQ 224 (279)
T ss_pred -cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccc-hHHHHHHHhccCCCCC--CCCc
Confidence 22345788999999999988899999999999999999999999874322111000 0000111111111100 0112
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.+.++.+++.+||+.+|++||+++|+++.
T Consensus 225 ~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 225 FSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 33468899999999999999999999753
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=307.15 Aligned_cols=248 Identities=27% Similarity=0.403 Sum_probs=199.3
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeee-cCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS-HPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lv~ 480 (673)
.+|++.+.||+|+||.||+|.. .|+.||+|.+... ...+.+.+|+.++++++|+|++++++++. .++..++|+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCC-----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence 4688899999999999999977 4888999987542 12467889999999999999999999864 456789999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.++++.... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||++......
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 80 EYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred ECCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 99999999999986542 3578999999999999999999999 9999999999999999999999999998765332
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
. ....++..|+|||++.+..++.++|||||||++|||++ |+.||......+. ...+...... ...
T Consensus 156 ~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~---------~~~~~~~~~~--~~~ 221 (256)
T cd05082 156 Q---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV---------VPRVEKGYKM--DAP 221 (256)
T ss_pred C---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH---------HHHHhcCCCC--CCC
Confidence 2 22344678999999988889999999999999999997 9999863322110 0000001110 111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+||+.+|++|||+.++++.|++
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 222 DGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 2234568899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=306.84 Aligned_cols=246 Identities=29% Similarity=0.435 Sum_probs=195.4
Q ss_pred ceeccCCcEEEEEEEeC--C--CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecc
Q 005864 408 QCIGIGGQASVYRGELP--S--GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
+.||+|+||.||+|.+. + +..||+|.+...... ...+++.+|+.++++++||||+++++++. .+..++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeC
Confidence 46999999999999653 2 368999998765332 34677899999999999999999999876 45679999999
Q ss_pred cCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC
Q 005864 484 ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN 563 (673)
Q Consensus 484 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 563 (673)
++|+|.+++.... .+++..+..++.|++.|++|||+. +++|+||||+||+++.++.+||+|||+++........
T Consensus 78 ~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 78 PLGPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred CCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 9999999998654 578999999999999999999999 9999999999999999999999999999876543332
Q ss_pred cee---cccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 564 WTE---FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 564 ~~~---~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
... ..++..|+|||.+.+..++.++||||||+++|||++ |..||......+.. ...... .....+
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~-----~~~~~~--~~~~~~---- 220 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVI-----AMLESG--ERLPRP---- 220 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHH-----HHHHcC--CcCCCC----
Confidence 211 123467999999998899999999999999999998 99998743221110 000000 011111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+||..+|++||++.++++.|++
T Consensus 221 ~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~ 254 (257)
T cd05060 221 EECPQEIYSIMLSCWKYRPEDRPTFSELESTFRR 254 (257)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 1233468899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-37 Score=305.66 Aligned_cols=240 Identities=23% Similarity=0.386 Sum_probs=188.3
Q ss_pred ceeccCCcEEEEEEEeCC-------------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 408 QCIGIGGQASVYRGELPS-------------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
+.||+|+||.||+|...+ ...|++|.+... .......+.+|+.++..++||||+++++++..+.
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~---~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS---HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh---hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 368999999999997532 235888887543 2234567888999999999999999999999988
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc-------eE
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE-------AR 547 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-------~k 547 (673)
..++||||+++|+|..++.... ..+++..+.+++.||++|++|||+. +++||||||+||+++.++. ++
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~ 152 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIK 152 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeE
Confidence 9999999999999999887543 3588899999999999999999999 9999999999999987654 89
Q ss_pred EecccceeecCCCCCCceecccccccccccccc-cCCcCcchhHHHHHHHHHHHH-hCCCCCcccccccccccccccccc
Q 005864 548 VSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAY-TMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLN 625 (673)
Q Consensus 548 l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~-~g~~p~~~~~~~~~~~~~~~~~~~ 625 (673)
++|||++...... ....++..|+|||.+. +..++.++|||||||++|||+ +|..||......+. .
T Consensus 153 l~d~g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~---------~ 219 (262)
T cd05077 153 LSDPGIPITVLSR----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK---------E 219 (262)
T ss_pred eCCCCCCccccCc----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH---------H
Confidence 9999998754322 2345788899999886 466899999999999999998 58888763221110 0
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
........... ....++.+++.+||+.||.+||++.++++.|.
T Consensus 220 ~~~~~~~~~~~----~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 220 RFYEGQCMLVT----PSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HHHhcCccCCC----CChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 01111111111 11245889999999999999999999998763
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=313.81 Aligned_cols=257 Identities=22% Similarity=0.342 Sum_probs=200.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|... +|..||+|.++... .......+.+|++++.+++||||+++++++..++..++|+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI--KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 36889999999999999999764 68889999886532 2234567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.++++.. ..+++..+..++.|+++||+|||+.. +++|+||+|+||+++.++.++|+|||++......
T Consensus 79 ey~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (308)
T cd06615 79 EHMDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 153 (308)
T ss_pred eccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence 999999999999765 34788899999999999999999732 8999999999999999999999999998755322
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccc---------------
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN--------------- 625 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--------------- 625 (673)
......++..|+|||.+.+..++.++||||||+++|||++|+.||......... ........
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 230 (308)
T cd06615 154 --MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELE-AMFGRPVSEGEAKESHRPVSGHP 230 (308)
T ss_pred --ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHH-HhhcCccccccccCCcccccCCC
Confidence 223456789999999998888999999999999999999999998632211000 00000000
Q ss_pred --------------cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 626 --------------EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 626 --------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.......+ .......+.++.+++.+||+.+|++|||+.|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 231 PDSPRPMAIFELLDYIVNEPPP--KLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CCccchhhHHHHHHHHhcCCCc--cCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000 00001134568899999999999999999999864
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=306.79 Aligned_cols=251 Identities=20% Similarity=0.300 Sum_probs=204.7
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||+|+||.+|++... +|+.||+|.+...... ....+++.+|+.++++++||||+++++++...+..++|+|
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS-PKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC-hHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 4788999999999999999654 6899999998654322 2345678999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++..... ..+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++.......
T Consensus 80 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 80 YCEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred cCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 9999999999976432 3478899999999999999999999 99999999999999999999999999998765433
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.......+++.|+|||+..+..++.++||||||+++++|++|+.||...... ....++.....+.. ...
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~--------~~~~~~~~~~~~~~---~~~ 224 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK--------NLVLKIIRGSYPPV---SSH 224 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH--------HHHHHHhcCCCCCC---ccc
Confidence 3333456788999999998888999999999999999999999998632211 11112222222111 112
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.++.+++.+||+.+|++||++.+|++
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 225 YSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred CCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 3456899999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=313.30 Aligned_cols=263 Identities=23% Similarity=0.366 Sum_probs=204.9
Q ss_pred ccHHHHHHHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeee
Q 005864 392 IVYEEIIRATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGF 469 (673)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 469 (673)
+.++.+..+.++|++.+.||+|+||.||+|... +++.+|+|.+..... ....+.+|+.++.++ +||||++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~ 83 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD----IDEEIEAEYNILKALSDHPNVVKFYGM 83 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc----hHHHHHHHHHHHHHHhcCCCeeeeeee
Confidence 445667778899999999999999999999664 688999998754211 235677899999999 69999999998
Q ss_pred ee-----cCCeeeEEEecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC
Q 005864 470 CS-----HPRHSFLVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543 (673)
Q Consensus 470 ~~-----~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 543 (673)
+. .++..++||||+++++|.+++.... ....+++..+..++.|+++|+.|||+. +++||||||+||+++++
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~ 160 (286)
T cd06638 84 YYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTE 160 (286)
T ss_pred eeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCC
Confidence 84 3456899999999999999886421 224578899999999999999999999 99999999999999999
Q ss_pred CceEEecccceeecCCCCCCceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc
Q 005864 544 YEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS 618 (673)
Q Consensus 544 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~ 618 (673)
+.++++|||++..............|++.|+|||++. +..++.++||||+||++|||++|+.||...........
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~ 240 (286)
T cd06638 161 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFK 240 (286)
T ss_pred CCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhh
Confidence 9999999999987654433334456899999999875 34578899999999999999999999874332211100
Q ss_pred ccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 619 NMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
......+....+ ......+.+++.+||+.||++|||+.|+++.
T Consensus 241 -----~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 241 -----IPRNPPPTLHQP----ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred -----ccccCCCcccCC----CCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 000001111111 1123458899999999999999999999874
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=312.37 Aligned_cols=248 Identities=26% Similarity=0.389 Sum_probs=200.7
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.|+..+.||+|+||.||+|.+. +++.||+|.+..... ....+.+.+|++++++++||||+++++++..++..++|+|
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIME 82 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc--hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEE
Confidence 3556788999999999999764 588999998864422 2345678999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++.. ..+++..+..++.|+++|+.|||+. +++|+||+|+||++++++.++++|||++.......
T Consensus 83 ~~~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 83 YLGGGSALDLLKP----GPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred ccCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcc
Confidence 9999999999864 3478899999999999999999998 99999999999999999999999999998765433
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.......++..|+|||++.+..++.++||||||+++|||++|+.||........ ...+.....+ .....
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--------~~~~~~~~~~---~~~~~ 224 (277)
T cd06642 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV--------LFLIPKNSPP---TLEGQ 224 (277)
T ss_pred hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH--------HhhhhcCCCC---CCCcc
Confidence 333345678899999999988899999999999999999999999863221110 0001011111 11113
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.+..+.+++.+||+.+|++||++.++++.
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 225 YSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 34568899999999999999999999863
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-38 Score=320.69 Aligned_cols=195 Identities=25% Similarity=0.374 Sum_probs=171.8
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-C-----CcccceeeeeecCCe
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-H-----RNIVKFYGFCSHPRH 475 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~l~~~~~~~~~ 475 (673)
+|++.+.||+|+||.|.+|.+ ++++.||||+++.. .....+...|+.+|..++ | -|+|+++++|...++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~----k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK----KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC----hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 799999999999999999954 57999999999754 334667778999999996 4 499999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC--ceEEecccc
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY--EARVSDFGI 553 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~--~~kl~Dfg~ 553 (673)
.|+|+|.+.. +|+++++...- ..++...+..++.||+.||.+||+. +|||+||||+|||+.+.+ .+||+|||.
T Consensus 263 lciVfELL~~-NLYellK~n~f-~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGS 337 (586)
T KOG0667|consen 263 LCIVFELLST-NLYELLKNNKF-RGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGS 337 (586)
T ss_pred eeeeehhhhh-hHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEeccc
Confidence 9999998876 99999998753 5689999999999999999999999 999999999999997654 699999999
Q ss_pred eeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcc
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDF 609 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 609 (673)
|...... ......+..|+|||++.+.+|+.+.||||||||++||++|.+-|.+
T Consensus 338 Sc~~~q~---vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 338 SCFESQR---VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred ccccCCc---ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 9876432 2256788999999999999999999999999999999999877753
|
|
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=308.12 Aligned_cols=252 Identities=25% Similarity=0.394 Sum_probs=201.5
Q ss_pred CCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchh---hhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLL---SEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
+|...+.||+|+||+||+|...+|+.+|+|.+..... ........+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4778899999999999999888899999998864321 1223456789999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
+||+++++|.+++.+.. .+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++++|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 99999999999997653 478899999999999999999999 999999999999999999999999999875422
Q ss_pred C------CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 560 G------SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 560 ~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
. ........++..|+|||++.+..++.++||||+|+++|||++|+.||............ .......+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~- 230 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYI---GAHRGLMPRL- 230 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHh---hhccCCCCCC-
Confidence 1 11122345788999999999888999999999999999999999998743221110000 0000001111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+ ...+.++.+++.+||+.+|++||++.|+++
T Consensus 231 -~----~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 231 -P----DSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred -C----CCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1 123455889999999999999999999975
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=318.14 Aligned_cols=247 Identities=26% Similarity=0.387 Sum_probs=204.0
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
-|...+.||.|+||.||.|++ .+...||||++............++..|+..|.+++|||++.+.|+|..+...|+|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 355567899999999999966 4788999999987665666677889999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
||-| |-.|++.-.+ +++.+-++..|+.+.++||+|||+. +.||||||+.||++++.|.||++|||.|..+.+.
T Consensus 107 YClG-SAsDlleVhk--KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA- 179 (948)
T KOG0577|consen 107 YCLG-SASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA- 179 (948)
T ss_pred HHhc-cHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCch-
Confidence 9976 7788776654 5688888999999999999999999 9999999999999999999999999999877543
Q ss_pred CCceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 562 SNWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
..++|||.|||||++. .+.|+-|+||||+|++..|+..+++|+-.++.+...+.. .+.-.|.++ ..
T Consensus 180 ---nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHI-----AQNesPtLq--s~- 248 (948)
T KOG0577|consen 180 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI-----AQNESPTLQ--SN- 248 (948)
T ss_pred ---hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHH-----HhcCCCCCC--Cc-
Confidence 5578999999999875 567999999999999999999999996543332221111 111112222 22
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.+..+..++..||++-|.+|||.+++++
T Consensus 249 --eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 249 --EWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred --hhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 34456888999999999999999999875
|
|
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-37 Score=307.20 Aligned_cols=257 Identities=27% Similarity=0.438 Sum_probs=205.9
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||.|+||+||+|... ++..+|+|++....... ..+.+.+|++.++.++|+|++++++.+..++..++|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 36889999999999999999754 68899999986543222 4678999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|++++++|.+++........+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++++|||++..+...
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADG 155 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence 9999999999998654335688999999999999999999999 9999999999999999999999999998766543
Q ss_pred CCC----ceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC
Q 005864 561 SSN----WTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635 (673)
Q Consensus 561 ~~~----~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
... .....++..|+|||++... .++.++||||||+++|||++|+.||........... ... ...+.....
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~----~~~-~~~~~~~~~ 230 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLML----TLQ-NDPPSLETG 230 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHH----Hhc-CCCCCcCCc
Confidence 322 1334678899999998776 789999999999999999999999874432211000 000 001111110
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+..+.+++.+||+.||++||++.|+++
T Consensus 231 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 231 -ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred -cccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 011234566889999999999999999999985
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=321.22 Aligned_cols=259 Identities=21% Similarity=0.293 Sum_probs=196.4
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC----
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR---- 474 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 474 (673)
..++|++.+.||+|+||.||+|... +|+.||+|++..... .......+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ-NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc-chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 3478999999999999999999764 689999999865432 2234567889999999999999999999986543
Q ss_pred --eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 475 --HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 475 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
..++||||+++ ++.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCC
Confidence 46899999976 66666643 367888899999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cc----
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MN---- 621 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~---- 621 (673)
+++..... .......+|+.|+|||.+.+..++.++||||+||++|||++|+.||............ ..
T Consensus 169 ~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (359)
T cd07876 169 LARTACTN-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMN 247 (359)
T ss_pred CccccccC-ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHH
Confidence 99754322 2223456889999999999999999999999999999999999999743321110000 00
Q ss_pred ---cccccccCCCCCC--------------C--CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 622 ---LSLNEILDPRLPL--------------P--SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 622 ---~~~~~~~~~~~~~--------------~--~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.........+... + ..........+.+++.+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 248 RLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred HHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000000000 0 0001112346889999999999999999999986
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=325.31 Aligned_cols=259 Identities=20% Similarity=0.277 Sum_probs=197.5
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC-----ee
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR-----HS 476 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~ 476 (673)
+|++.+.||+|+||.||+|.. .+|+.||+|++..... .....+.+.+|+++++.++||||+++++++..++ ..
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ-NLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccccc-chHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 478889999999999999976 4799999999865322 2234567889999999999999999999998766 78
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++|+||+. ++|.+++... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.
T Consensus 80 ~lv~e~~~-~~l~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSP---QPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEEeeccc-cCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceee
Confidence 99999997 4888888654 3588999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC-CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------cc-----
Q 005864 557 LKPGSS-NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-------NL----- 622 (673)
Q Consensus 557 ~~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-------~~----- 622 (673)
...... ......+++.|+|||.+.+. .++.++||||+||++|||++|+.||......+...... ..
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~ 232 (372)
T cd07853 153 EEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSA 232 (372)
T ss_pred cccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence 543322 22334678899999998764 47899999999999999999999997543221100000 00
Q ss_pred --ccccccCCCCCCCC------cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 623 --SLNEILDPRLPLPS------RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 623 --~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+......+. ......+.++.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 233 CEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred hHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 00000000000000 001112456889999999999999999999985
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-37 Score=305.44 Aligned_cols=252 Identities=27% Similarity=0.408 Sum_probs=205.0
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||.|+||.||+|... +++.+++|.+..... ...+.+.+|++++++++||||+++++++...+..+++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG---DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch---hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 57888999999999999999764 588999999875422 24678899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++|+|||.+......
T Consensus 80 e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 154 (262)
T cd06613 80 EYCGGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT 154 (262)
T ss_pred eCCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhh
Confidence 9999999999987652 3578899999999999999999999 9999999999999999999999999999866543
Q ss_pred CCCceecccccccccccccccC---CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC-C
Q 005864 561 SSNWTEFAGTFGYVAPELAYTM---KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP-S 636 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 636 (673)
........++..|+|||.+.+. .++.++||||||+++|||++|+.||.......... ......+..+ .
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~--------~~~~~~~~~~~~ 226 (262)
T cd06613 155 IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF--------LISKSNFPPPKL 226 (262)
T ss_pred hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH--------HHHhccCCCccc
Confidence 3333445678899999998776 78999999999999999999999987433211100 0000100100 0
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+.++.+++.+||..+|.+|||+.+++.
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 227 KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 122344567999999999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=314.68 Aligned_cols=260 Identities=18% Similarity=0.267 Sum_probs=199.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||.|+||.||+|... +++.||+|.+..... ......+.+|+.++++++||||+++++++..++..++|+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 46888999999999999999765 688999999864422 222456778999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||++ ++|.+++...+ ..+++..+..++.|+++||+|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 84 e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 84 EYLD-KDLKQYLDDCG--NSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred eccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 9998 49999887653 3578899999999999999999999 9999999999999999999999999999765433
Q ss_pred CCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccc-------cccccccccccC---
Q 005864 561 SSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS-------SNMNLSLNEILD--- 629 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-------~~~~~~~~~~~~--- 629 (673)
........+++.|+|||.+.+. .++.++||||||+++|||++|+.||......+... ......+...+.
T Consensus 158 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (301)
T cd07873 158 TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 237 (301)
T ss_pred CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccc
Confidence 3333445678899999987654 47889999999999999999999987433211000 000001111100
Q ss_pred ---CCCCCC-C----cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 630 ---PRLPLP-S----RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 630 ---~~~~~~-~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+.. . ......+..+.+++.+|++.||.+|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 238 FKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000000 0 001122346789999999999999999999985
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=315.47 Aligned_cols=255 Identities=23% Similarity=0.377 Sum_probs=201.0
Q ss_pred hcCCCccceeccCCcEEEEEEEeC--------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP--------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCS 471 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 471 (673)
.++|.+.+.||+|+||.||+|+.. .+..||+|.++... .......+..|+.++.++ +||||+++++++.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA--TDKDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC--ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 357888999999999999999642 34579999887532 223466788999999999 6999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCC-------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCe
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGS-------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNV 538 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 538 (673)
..+..++|+||+++|+|.+++..... ...+++.++.+++.|++.||.|||+. +++||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Ni 165 (314)
T cd05099 89 QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNV 165 (314)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeE
Confidence 98999999999999999999976421 23588999999999999999999999 999999999999
Q ss_pred EeCCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccc
Q 005864 539 LLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSS 615 (673)
Q Consensus 539 ll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~ 615 (673)
++++++.+||+|||+++........ .....++..|+|||++.+..++.++||||||+++|||++ |..||......+.
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~ 245 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEEL 245 (314)
T ss_pred EEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 9999999999999999865432211 112234467999999998889999999999999999999 8888864322110
Q ss_pred cccccccccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 616 SSSNMNLSLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 616 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+... ....+. ..+.++.+++.+||+.+|++|||+.|+++.|+
T Consensus 246 --------~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~ 291 (314)
T cd05099 246 --------FKLLREGHRMDKPS----NCTHELYMLMRECWHAVPTQRPTFKQLVEALD 291 (314)
T ss_pred --------HHHHHcCCCCCCCC----CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 0001111 111111 22345889999999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=317.07 Aligned_cols=259 Identities=19% Similarity=0.268 Sum_probs=193.9
Q ss_pred ccceeccC--CcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 406 AEQCIGIG--GQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 406 ~~~~ig~G--~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
+.++||+| +||+||++.. ++|+.||+|++...... ....+.+.+|+++++.++||||+++++++..++..++|+||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT-NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhcc-HHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 45789999 7899999966 57999999998654322 23356678899999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||+.+........
T Consensus 81 ~~~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 81 MAYGSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred cCCCcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 999999999975432 3478999999999999999999999 999999999999999999999999986543321111
Q ss_pred -------Cceeccccccccccccccc--CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccc------
Q 005864 563 -------NWTEFAGTFGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEI------ 627 (673)
Q Consensus 563 -------~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~------ 627 (673)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||....................
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTI 236 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccch
Confidence 1122346678999999875 4588999999999999999999999974321110000000000000
Q ss_pred -------------cCCCC----------C-----CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 628 -------------LDPRL----------P-----LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 628 -------------~~~~~----------~-----~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+... + ...........++.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 00000 0 000111233457899999999999999999999975
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=311.97 Aligned_cols=252 Identities=23% Similarity=0.355 Sum_probs=203.0
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||.|+||.||+|... +++.||+|.+... .....+.+.+|++++++++||||+++++++..+...++|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE---SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC---CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence 356888999999999999999764 6899999998643 233457788999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++++|.+++...+ ..+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~ 155 (280)
T cd06611 81 IEFCDGGALDSIMLELE--RGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKS 155 (280)
T ss_pred eeccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhcc
Confidence 99999999999987653 3588999999999999999999999 999999999999999999999999999876544
Q ss_pred CCCCceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCC
Q 005864 560 GSSNWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
.........+++.|+|||.+. +..++.++||||||+++|||++|+.||......+.. ........+.+..
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~ 230 (280)
T cd06611 156 TLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVL-----LKILKSEPPTLDQ 230 (280)
T ss_pred cccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHH-----HHHhcCCCCCcCC
Confidence 333344566889999999874 345778999999999999999999998743221110 0000000111111
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.++.+++.+||+.+|.+||++.++++
T Consensus 231 ----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 231 ----PSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred ----cccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 1123446889999999999999999999985
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=308.32 Aligned_cols=252 Identities=26% Similarity=0.343 Sum_probs=188.7
Q ss_pred eeccCCcEEEEEEEeCC---CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 409 CIGIGGQASVYRGELPS---GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 409 ~ig~G~~g~vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
.||+|+||+||+|.... ...+|+|.+.... .......+.+|+..++.++||||+++++++...+..++||||+++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA--TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccC--ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence 58999999999996543 4568888765432 233456788999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCC--CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC-
Q 005864 486 GSLAEILSNDGS--IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS- 562 (673)
Q Consensus 486 gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~- 562 (673)
|+|.+++..... ....++.....++.|++.|++|||+. +|+||||||+||++++++.+||+|||++........
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 156 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY 156 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccchhe
Confidence 999999976532 12356788889999999999999999 999999999999999999999999999865432211
Q ss_pred -Cceeccccccccccccccc-------CCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCC
Q 005864 563 -NWTEFAGTFGYVAPELAYT-------MKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 563 -~~~~~~~~~~y~aPE~~~~-------~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
......+++.|+|||+... ..++.++|||||||++|||++ |..||......+........ ....++
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-----~~~~~~ 231 (269)
T cd05042 157 ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVRE-----QDIKLP 231 (269)
T ss_pred eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhc-----cCccCC
Confidence 1122345678999998642 356789999999999999999 78887643221100000000 011111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+ ......+..+.+++..|| .||++|||++||++.|.
T Consensus 232 ~~-~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 232 KP-QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CC-cccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 11 111223445777888998 59999999999999874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=311.79 Aligned_cols=254 Identities=23% Similarity=0.342 Sum_probs=202.0
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|... +|+.||+|.+.... .......+.+|+.++++++||||+++++++..++..++|+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL--DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc--CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 35788899999999999999775 79999999886532 2234577889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++........+++..+..++.|++.|+.|||+.. +++|+||+|+||+++.++.++|+|||.+......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence 99999999999876533346899999999999999999999632 8999999999999999999999999998765322
Q ss_pred CCCceecccccccccccccccCC------cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCC
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMK------VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~------~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
......++..|+|||.+.+.. ++.++|+|||||++|||++|+.||....... .......+.+...+
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~~~~~~~- 228 (286)
T cd06622 157 --LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN-----IFAQLSAIVDGDPP- 228 (286)
T ss_pred --ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh-----HHHHHHHHhhcCCC-
Confidence 223345788999999985543 4789999999999999999999986322110 01111122222211
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+.++.+++.+||+.+|++||+++++++
T Consensus 229 --~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 229 --TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred --CCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 112234566889999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=330.75 Aligned_cols=257 Identities=21% Similarity=0.255 Sum_probs=190.3
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC------
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP------ 473 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 473 (673)
..+|++.+.||+|+||.||+|... +++.||||++... .....+|+.+++.++||||+++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~-------~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD-------PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC-------cchHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 357999999999999999999764 6899999987542 12234699999999999999999886432
Q ss_pred --CeeeEEEecccCCChHHHHhcC-CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-ceEEe
Q 005864 474 --RHSFLVYECLERGSLAEILSND-GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-EARVS 549 (673)
Q Consensus 474 --~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~ 549 (673)
...++||||+++ ++.+++... .....+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+
T Consensus 138 ~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~ 213 (440)
T PTZ00036 138 KNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLC 213 (440)
T ss_pred CceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeee
Confidence 246789999986 787776532 2234688999999999999999999999 999999999999999664 69999
Q ss_pred cccceeecCCCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cc
Q 005864 550 DFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MN 621 (673)
Q Consensus 550 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~ 621 (673)
|||+++.+..... .....|++.|+|||++.+. .++.++||||+||++|||++|..||......+..... ..
T Consensus 214 DFGla~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 214 DFGSAKNLLAGQR-SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE 292 (440)
T ss_pred ccccchhccCCCC-cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 9999987644322 2345679999999988654 6899999999999999999999999754322110000 00
Q ss_pred ccccc----ccCCCCCCC-Ccch-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 622 LSLNE----ILDPRLPLP-SRNI-----QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 622 ~~~~~----~~~~~~~~~-~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..... ..+..++.. .... ...+.++.+++.+||..||.+|||+.|+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 00000 000000100 0000 112356889999999999999999999874
|
|
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=323.11 Aligned_cols=259 Identities=20% Similarity=0.286 Sum_probs=197.5
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-----
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP----- 473 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 473 (673)
..++|++.+.||+|+||.||+|... .++.||||++...... ....+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccC-hHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 4568999999999999999999764 6899999998754322 23456778899999999999999999988643
Q ss_pred -CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 474 -RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 474 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
...++||||+++ ++.+.+.. .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCc
Confidence 346899999976 67776653 377888999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc------------
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM------------ 620 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~------------ 620 (673)
+++..... .......++..|+|||++.+..++.++|||||||++|||++|+.||......+......
T Consensus 165 ~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (355)
T cd07874 165 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 243 (355)
T ss_pred ccccCCCc-cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 99865332 22234568999999999999899999999999999999999999997433211100000
Q ss_pred --cccccccc----------------CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 --NLSLNEIL----------------DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 --~~~~~~~~----------------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........ +...+...........++.+++.+|++.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~ 310 (355)
T cd07874 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ 310 (355)
T ss_pred hhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence 00000000 00000001111122346889999999999999999999986
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=307.63 Aligned_cols=250 Identities=30% Similarity=0.471 Sum_probs=200.8
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhh------hHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSE------ISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
+|.+.+.||+|++|.||+|... +++.||+|.+....... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 3677889999999999999764 68899999886542221 1234678899999999999999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccccee
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 555 (673)
.++|+||+++++|.+++...+ .+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCc
Confidence 999999999999999997653 478889999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCC------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC
Q 005864 556 FLKPGSS------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD 629 (673)
Q Consensus 556 ~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 629 (673)
....... ......++..|+|||.+.+..++.++||||+|+++|||++|+.||.......... .......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-----~~~~~~~ 229 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIF-----KIGENAS 229 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHH-----HHhccCC
Confidence 7653211 1122457889999999988889999999999999999999999987432211100 0001111
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 630 PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 630 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+..+ ...+..+.+++.+||+.||.+||++.|+++
T Consensus 230 ~~~~------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 230 PEIP------SNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred CcCC------cccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 1111 123456889999999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=312.86 Aligned_cols=258 Identities=27% Similarity=0.401 Sum_probs=204.0
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|... +|+.||+|++.... .....+.+.+|++++..++||||+++++++...+..++||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA--KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC--cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence 46778899999999999999764 68899999876532 2334678899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++... ..+++..+..++.+++.|+.|||+.. +++||||+|+||++++++.++|+|||++......
T Consensus 83 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 83 EFMDCGSLDRIYKKG---GPIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred ecCCCCCHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 999999999998764 34789999999999999999999732 8999999999999999999999999998754322
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc---ccccccccCCCCCCCCc
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM---NLSLNEILDPRLPLPSR 637 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 637 (673)
. .....++..|+|||++.+..++.++|||||||++||+++|+.||+............ ......+.....+..
T Consensus 158 ~--~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 233 (284)
T cd06620 158 I--ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRL-- 233 (284)
T ss_pred c--cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCC--
Confidence 1 223568899999999988889999999999999999999999997443211100000 011112221111111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.....+..+.+++.+||+.||++|||+.|++++
T Consensus 234 ~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 234 PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 111244568999999999999999999999875
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-37 Score=314.39 Aligned_cols=254 Identities=23% Similarity=0.281 Sum_probs=206.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|+..+.||+|+||+||+|... +++.||+|.+...........+.+..|++++..++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999775 59999999997654443345678999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+.+++|.+++.... ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 81 DYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 9999999999987543 24688999999999999999999999 9999999999999999999999999998755322
Q ss_pred CC-----------------------------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccc
Q 005864 561 SS-----------------------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIS 611 (673)
Q Consensus 561 ~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 611 (673)
.. ......|+..|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 11 1112357889999999998889999999999999999999999987432
Q ss_pred cccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCC----HHHHHH
Q 005864 612 LLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPT----MQTVCQ 669 (673)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps----~~~v~~ 669 (673)
.. .....+.......+.. ...+..+.+++.+||+.||++||| ++|+++
T Consensus 237 ~~--------~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 237 RD--------ETFSNILKKEVTFPGS--PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred hH--------HHHHHHhcCCccCCCc--cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 21 1122222323222211 114567999999999999999999 777664
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-37 Score=307.24 Aligned_cols=239 Identities=22% Similarity=0.363 Sum_probs=186.6
Q ss_pred eeccCCcEEEEEEEeCC-------------------------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcc
Q 005864 409 CIGIGGQASVYRGELPS-------------------------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNI 463 (673)
Q Consensus 409 ~ig~G~~g~vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 463 (673)
.||+|+||.||+|.... ...|++|.+.... ......+.+|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH---RDIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH---HHHHHHHHHHHHHHhcCCCCCe
Confidence 58999999999996421 1358899876432 2335678889999999999999
Q ss_pred cceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC
Q 005864 464 VKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543 (673)
Q Consensus 464 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 543 (673)
+++++++..+...++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++++
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK--GRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARL 153 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEecc
Confidence 999999999999999999999999999987543 3578888999999999999999999 99999999999999764
Q ss_pred C-------ceEEecccceeecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHH-hCCCCCccccccc
Q 005864 544 Y-------EARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLS 614 (673)
Q Consensus 544 ~-------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~-~g~~p~~~~~~~~ 614 (673)
+ .++++|||.+...... ....++..|+|||.+.+ ..++.++||||||+++||++ +|+.||......+
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred CcccCccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 3 3799999988644221 22356788999998865 56899999999999999995 6999986432111
Q ss_pred ccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 615 SSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
. ..........+... ...+.+++.+||+.+|++|||+.++++.|+
T Consensus 230 ~---------~~~~~~~~~~~~~~----~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 230 K---------ERFYEKKHRLPEPS----CKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred H---------HHHHHhccCCCCCC----ChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 0 11111111111111 235889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-37 Score=306.70 Aligned_cols=248 Identities=23% Similarity=0.389 Sum_probs=193.2
Q ss_pred ceeccCCcEEEEEEEeCC-CC--EEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEecc
Q 005864 408 QCIGIGGQASVYRGELPS-GE--VVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
+.||+|+||.||+|...+ |. .+++|.++... .....+.+.+|++++.++ +||||+++++++...+..++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC--CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 368999999999997753 44 46888876432 223456788999999999 7999999999999999999999999
Q ss_pred cCCChHHHHhcCCC-------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEec
Q 005864 484 ERGSLAEILSNDGS-------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSD 550 (673)
Q Consensus 484 ~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 550 (673)
++|+|.+++...+. ...+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++|
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~d 155 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIAD 155 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECC
Confidence 99999999975431 13478999999999999999999998 999999999999999999999999
Q ss_pred ccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccC
Q 005864 551 FGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILD 629 (673)
Q Consensus 551 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 629 (673)
||++....... .......+..|+|||++....++.++||||||+++|||++ |..||......+. ...+..
T Consensus 156 fgl~~~~~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~--------~~~~~~ 226 (270)
T cd05047 156 FGLSRGQEVYV-KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL--------YEKLPQ 226 (270)
T ss_pred CCCccccchhh-hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHH--------HHHHhC
Confidence 99986322111 1111223567999999988889999999999999999997 9999864321110 011101
Q ss_pred C-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 630 P-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 630 ~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
. ....+. ..+.++.+++.+||+.+|.+|||+.++++.|++
T Consensus 227 ~~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~ 267 (270)
T cd05047 227 GYRLEKPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 267 (270)
T ss_pred CCCCCCCC----cCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 0 111111 223458899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=313.47 Aligned_cols=256 Identities=21% Similarity=0.268 Sum_probs=201.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||++... +++.|++|.+...........+.+.+|+++++.++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999765 58899999987654333445667889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++...+ .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||+++.....
T Consensus 81 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 81 EYVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred ecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 9999999999997653 478899999999999999999999 9999999999999999999999999998642110
Q ss_pred CC---------------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccc
Q 005864 561 SS---------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625 (673)
Q Consensus 561 ~~---------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 625 (673)
.. ......++..|+|||++....++.++|+||||+++||+++|..||..... .....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~--------~~~~~ 226 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--------EELFG 226 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHH
Confidence 00 01123567889999999888899999999999999999999999863221 11111
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.........+... ...+..+.+++.+||+.||++||++.++.+.|+
T Consensus 227 ~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 227 QVISDDIEWPEGD-EALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred HHHhcccCCCCcc-ccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 1111111111111 123445889999999999999999666655553
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=311.20 Aligned_cols=261 Identities=25% Similarity=0.354 Sum_probs=201.2
Q ss_pred cCCCccceeccCCcEEEEEEEe-----CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--C
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-----PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--R 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~ 474 (673)
..|.+.+.||+|+||.||.+.. .++..||+|.++... .......+.+|+++++.++|||++++++++... .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc--cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC
Confidence 3477889999999999999964 358899999986542 233456799999999999999999999998765 5
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+|||++
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccc
Confidence 6889999999999999997643 3579999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCC---ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccc--cccc-ccc---cccc
Q 005864 555 KFLKPGSSN---WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLS--SSSS-NMN---LSLN 625 (673)
Q Consensus 555 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~~~-~~~---~~~~ 625 (673)
+........ .....++..|+|||++.+..++.++||||||+++|||++++.|+....... .... ... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05079 157 KAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV 236 (284)
T ss_pred cccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHH
Confidence 866433221 123446678999999988889999999999999999999877643211000 0000 000 0000
Q ss_pred ccc-CC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 626 EIL-DP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 626 ~~~-~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
+.+ +. ..+.+ ...+..+.+++.+||+.+|++|||++++++.|++
T Consensus 237 ~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 282 (284)
T cd05079 237 RVLEEGKRLPRP----PNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA 282 (284)
T ss_pred HHHHcCccCCCC----CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence 000 11 11111 1234569999999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=289.48 Aligned_cols=262 Identities=21% Similarity=0.354 Sum_probs=218.1
Q ss_pred HHHHHHHhcCCCccceeccCCcEEEEEE-EeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeee
Q 005864 394 YEEIIRATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCS 471 (673)
Q Consensus 394 ~~~~~~~~~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 471 (673)
++++-+.+. +.+|+|+|+.|-.+ ...+|..||||++.+. ......+..+|++++... .|+||++++++|.
T Consensus 75 F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq---~gHsR~RvfREVe~f~~Cqgh~nilqLiefFE 146 (463)
T KOG0607|consen 75 FEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ---PGHSRSRVFREVETFYQCQGHKNILQLIEFFE 146 (463)
T ss_pred HHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcC---CchHHHHHHHHHHHHHHhcCCccHHHHHHHhc
Confidence 566666554 67999999999988 5678999999998764 344578889999999999 5999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc---eEE
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE---ARV 548 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl 548 (673)
++...|+|||.|.||+|.++++++ ..+++.++.++.++||.||.+||.+ ||.|||+||+||+...... +||
T Consensus 147 dd~~FYLVfEKm~GGplLshI~~~---~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKi 220 (463)
T KOG0607|consen 147 DDTRFYLVFEKMRGGPLLSHIQKR---KHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKI 220 (463)
T ss_pred ccceEEEEEecccCchHHHHHHHh---hhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceee
Confidence 999999999999999999999886 4689999999999999999999999 9999999999999976644 899
Q ss_pred ecccceeecCCCC-------CCceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCccccccc--
Q 005864 549 SDFGIAKFLKPGS-------SNWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLS-- 614 (673)
Q Consensus 549 ~Dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-- 614 (673)
|||++..-+.... ......+|+..|||||+.. ...|+.+.|.||+|||+|-|+.|..||.+.=..+
T Consensus 221 CDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCG 300 (463)
T KOG0607|consen 221 CDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCG 300 (463)
T ss_pred eccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCC
Confidence 9999886543221 1223467888999999764 3458899999999999999999999996432210
Q ss_pred -ccccc----cccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 615 -SSSSN----MNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 615 -~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.+.. .+..+..+-++++.+|...|...+.+..+++...+..|+.+|.++.+++.
T Consensus 301 WdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 301 WDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred ccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 01111 23446677889999999999999999999999999999999999998875
|
|
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-37 Score=306.19 Aligned_cols=258 Identities=24% Similarity=0.388 Sum_probs=203.6
Q ss_pred CCCccceeccCCcEEEEEEEeCC--CCEEEEEeeccchh-------hhhHHHHHHHHHHHHHhc-cCCCcccceeeeeec
Q 005864 403 NFDAEQCIGIGGQASVYRGELPS--GEVVAVKKFHSLLL-------SEISVQREFLNEIKALTE-IRHRNIVKFYGFCSH 472 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~~--~~~vavK~~~~~~~-------~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~ 472 (673)
.|++.+.||+|+||.||+|.... ++.+|+|.+..... .......++.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788999999999999998754 78899998754221 122345667788888875 699999999999999
Q ss_pred CCeeeEEEecccCCChHHHHhcC-CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecc
Q 005864 473 PRHSFLVYECLERGSLAEILSND-GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 551 (673)
++..++||||+++++|.+++... .....+++..++.++.|++.|+.|||+.. +++|+||+|+||+++.++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999999999988542 12245888999999999999999999631 8999999999999999999999999
Q ss_pred cceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
|.+....... ......++..|+|||.+.+..++.++||||||+++|||++|+.||........ ...+....
T Consensus 159 g~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~--------~~~~~~~~ 229 (269)
T cd08528 159 GLAKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSL--------ATKIVEAV 229 (269)
T ss_pred cceeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHH--------HHHHhhcc
Confidence 9998765433 33456688899999999988899999999999999999999999863322111 11111111
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..... ....+.++.+++.+||+.||++||++.|+.+++++
T Consensus 230 ~~~~~--~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 230 YEPLP--EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred CCcCC--cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 11100 11233568899999999999999999999999874
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-37 Score=305.03 Aligned_cols=248 Identities=25% Similarity=0.388 Sum_probs=190.7
Q ss_pred ceeccCCcEEEEEEEeC----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeee-cCCeeeEEEec
Q 005864 408 QCIGIGGQASVYRGELP----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS-HPRHSFLVYEC 482 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~ 482 (673)
+.||+|+||.||+|.+. ++..||+|.+... ......+.+.+|+.+++.++||||+++++++. .++..++|+||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI--TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc--CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 46899999999999753 2457999987542 22334677889999999999999999999875 45568899999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++|+|.+++.... ...++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||+++.+.....
T Consensus 79 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 79 MKHGDLRNFIRSET--HNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred CCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 99999999997643 3356778889999999999999999 999999999999999999999999999976533211
Q ss_pred ----CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhC-CCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 563 ----NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-KHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 563 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
......++..|+|||++.+..++.++||||||+++|||++| ..||...... ...............
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~- 224 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF--------DITVYLLQGRRLLQP- 224 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH--------HHHHHHhcCCCCCCC-
Confidence 11223456789999999888899999999999999999995 5555432111 011111111111111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
...+..+.+++.+||+.+|++||++.|+++.|++
T Consensus 225 --~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~ 258 (262)
T cd05058 225 --EYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQ 258 (262)
T ss_pred --CcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 1223468899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-37 Score=302.94 Aligned_cols=248 Identities=27% Similarity=0.412 Sum_probs=199.0
Q ss_pred ceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCC
Q 005864 408 QCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGS 487 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 487 (673)
+.||+|+||.||+|...+++.||+|.+...... .....+.+|++++++++||||+++++++...+..++|+||+++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence 468999999999998877999999988654332 346789999999999999999999999999999999999999999
Q ss_pred hHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCc--e
Q 005864 488 LAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW--T 565 (673)
Q Consensus 488 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~--~ 565 (673)
|.+++.... ..+++..+..++.+++.|++|||++ +++||||+|+||+++.++.++|+|||++.......... .
T Consensus 79 l~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 79 LLTFLRKKK--NRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred HHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence 999997643 3578899999999999999999999 99999999999999999999999999997654221111 1
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcchHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLI 644 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (673)
....+..|+|||++.+..++.++|+||||+++|||++ |..||....... ..+.+......+ .....+.
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~---------~~~~~~~~~~~~--~~~~~~~ 222 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ---------TRERIESGYRMP--APQLCPE 222 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH---------HHHHHhcCCCCC--CCccCCH
Confidence 1223567999999988889999999999999999999 888876332110 011111111110 1123345
Q ss_pred HHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 645 SILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 645 ~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
++.+++.+||..+|.+|||+.|+++.|++
T Consensus 223 ~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 223 EIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred HHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 69999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-37 Score=309.33 Aligned_cols=247 Identities=26% Similarity=0.334 Sum_probs=204.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|... +++.||+|.+...........+.+.+|++++++++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36888999999999999999765 68999999987654444445677899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++... ..+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 81 EYVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 999999999999775 3578899999999999999999998 9999999999999999999999999999876433
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.....+++.|+|||.+.+...+.++||||||+++|+|++|+.||...... .....+.......+..
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~--- 220 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI--------QIYEKILEGKVRFPSF--- 220 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhcCCccCCcc---
Confidence 23456889999999998888899999999999999999999998743311 1111222223332222
Q ss_pred HHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.+..+.+++.+||..||.+|| +++|+++
T Consensus 221 -~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 221 -FSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred -CCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 234588999999999999999 7777753
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-37 Score=305.49 Aligned_cols=252 Identities=25% Similarity=0.350 Sum_probs=187.5
Q ss_pred eeccCCcEEEEEEEeCCC---CEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 409 CIGIGGQASVYRGELPSG---EVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 409 ~ig~G~~g~vy~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
.||+|+||+||+|...++ ..+++|.+.... .....+.+.+|+..++.++||||+++++++......++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA--SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL 79 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC--ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence 599999999999965443 345666655432 223467899999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCC-CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC--C
Q 005864 486 GSLAEILSNDGS-IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS--S 562 (673)
Q Consensus 486 gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~--~ 562 (673)
|+|.++++.... ....++.....++.|+++||+|||+. +++||||||+||+++.++.++|+|||++....... .
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 156 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIE 156 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcchhhh
Confidence 999999976432 23466777889999999999999999 99999999999999999999999999986432211 1
Q ss_pred Cceeccccccccccccccc-------CCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCC
Q 005864 563 NWTEFAGTFGYVAPELAYT-------MKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~-------~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
......++..|+|||++.. ..++.++||||||+++|||++ |..||......+..............++.+..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (268)
T cd05086 157 TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLEL 236 (268)
T ss_pred cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCC
Confidence 1233567889999998743 245789999999999999997 56677533221111000011111122222221
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.....+.+++..|| .+|++||+++||++.|.
T Consensus 237 ------~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 237 ------PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred ------CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 12345778999999 67999999999999874
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-37 Score=312.69 Aligned_cols=248 Identities=27% Similarity=0.381 Sum_probs=199.4
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|+....||+|+||.||++... ++..||||.+.... ....+.+.+|+..++.++||||+++++.+..++..++||||
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~ 100 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK---QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEF 100 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch---HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeC
Confidence 334467999999999999764 68899999876432 22356788999999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++++|.+++... .+++.++..++.|++.|++|||+. +++||||||+||++++++.++|+|||++........
T Consensus 101 ~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~ 173 (292)
T cd06658 101 LEGGALTDIVTHT----RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP 173 (292)
T ss_pred CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc
Confidence 9999999998643 378899999999999999999999 999999999999999999999999999876544333
Q ss_pred CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHH
Q 005864 563 NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDK 642 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (673)
......++..|+|||...+..++.++||||||+++|||++|+.||......... ......+.+.... ....
T Consensus 174 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~-----~~~~~~~~~~~~~----~~~~ 244 (292)
T cd06658 174 KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAM-----RRIRDNLPPRVKD----SHKV 244 (292)
T ss_pred cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-----HHHHhcCCCcccc----cccc
Confidence 334456889999999998888999999999999999999999998643221110 0011111111111 1123
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 643 LISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 643 ~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
+..+.+++.+||..||++|||++|+++.
T Consensus 245 ~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 245 SSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 3458889999999999999999999863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-37 Score=310.65 Aligned_cols=261 Identities=22% Similarity=0.340 Sum_probs=201.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|+..+.||+|+||.||+|... +|+.||+|++...... ....+.+.+|+.++++++|||++++++++..+...++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD-PVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC-ccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 36888999999999999999776 5899999988654221 223456889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|..+.... ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 80 EYCDHTVLNELEKNP---RGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred eccCccHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 999999888877654 3488999999999999999999998 9999999999999999999999999999877554
Q ss_pred CCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc---c---cccccc------
Q 005864 561 SSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM---N---LSLNEI------ 627 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~---~---~~~~~~------ 627 (673)
........++..|+|||++.+ ..++.++||||||+++|||++|+.||......+...... . ....+.
T Consensus 154 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07847 154 GDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQF 233 (286)
T ss_pred cccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccc
Confidence 433344567889999999875 457889999999999999999999986433211100000 0 000000
Q ss_pred ----cCCCCCCCC---cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 628 ----LDPRLPLPS---RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 628 ----~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+...... ......+..+.+++.+||+.+|++||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 234 FKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000000000 011123466889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-37 Score=310.66 Aligned_cols=260 Identities=22% Similarity=0.318 Sum_probs=193.0
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc---CCCcccceeeeeec-----C
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI---RHRNIVKFYGFCSH-----P 473 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~-----~ 473 (673)
+|++.+.||+|+||+||+|... +|+.||+|.++.....+ .....+.+|+.++..+ +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED-GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC-CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 4788899999999999999765 68999999886532221 1123455666666655 79999999998864 3
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccc
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGI 553 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 553 (673)
...++|+||+++ +|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 80 ~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 80 TKVTLVFEHVDQ-DLRTYLDKVPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred ceEEEEEccccc-CHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCc
Confidence 457899999985 89998876432 4588999999999999999999999 999999999999999999999999999
Q ss_pred eeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccccc-
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLSLN- 625 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~~~- 625 (673)
+....... ......++..|+|||++.+..++.++||||+||++|||++|+.||............ ....+.
T Consensus 155 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07863 155 ARIYSCQM-ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 233 (288)
T ss_pred cccccCcc-cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcc
Confidence 98664322 223456789999999999889999999999999999999999998643211100000 000000
Q ss_pred ------cccCCCCCC-CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 ------EILDPRLPL-PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ------~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.... ...........+.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 234 DVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000000 00111123456889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-37 Score=309.86 Aligned_cols=263 Identities=25% Similarity=0.371 Sum_probs=204.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--CC
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH--PR 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~ 474 (673)
+.|...+.||+|+||.||+|.+. +++.||||.+...... ...+.+.+|++.++.++||||+++++++.. ..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR 81 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence 45777899999999999999753 4788999998765332 346789999999999999999999999877 55
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++||||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++++|||.+
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 7899999999999999998654 3589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCc---eecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccc--cc----ccccccc
Q 005864 555 KFLKPGSSNW---TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS--SS----NMNLSLN 625 (673)
Q Consensus 555 ~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~--~~----~~~~~~~ 625 (673)
.......... ....++..|+|||...+..++.++||||||+++|||++|+.|+......... .. .......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 8765332221 1223456799999998889999999999999999999999997642211100 00 0001111
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
+.+......+ .....+.++.+++.+||+.+|++|||+.|++++|++
T Consensus 237 ~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05038 237 ELLKEGERLP--RPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDR 282 (284)
T ss_pred HHHHcCCcCC--CCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhh
Confidence 1111111111 111233568999999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-37 Score=316.81 Aligned_cols=254 Identities=22% Similarity=0.367 Sum_probs=201.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC--------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeec
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP--------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSH 472 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 472 (673)
.+|.+.+.||+|+||.||+|+.. .+..||+|.++.. ......+++.+|++++.++ +||||+++++++..
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD--ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc--cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 46889999999999999999642 1236899987643 2223467889999999999 79999999999999
Q ss_pred CCeeeEEEecccCCChHHHHhcCC-------------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeE
Q 005864 473 PRHSFLVYECLERGSLAEILSNDG-------------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVL 539 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil 539 (673)
++..++++||+++|+|.+++.... ....+++.++..++.|++.||+|||+. +++||||||+||+
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nil 166 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVL 166 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEE
Confidence 999999999999999999997532 123578899999999999999999999 9999999999999
Q ss_pred eCCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccc
Q 005864 540 LSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSS 616 (673)
Q Consensus 540 l~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~ 616 (673)
+++++.+||+|||+++........ .....++..|+|||++.+..++.++||||||+++|||++ |..||......+
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-- 244 (334)
T cd05100 167 VTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE-- 244 (334)
T ss_pred EcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH--
Confidence 999999999999999866432211 122234567999999999899999999999999999998 888886432211
Q ss_pred ccccccccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 617 SSNMNLSLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 617 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
....+... ....+. ..+.++.+++.+||+.+|++||++.|+++.|+
T Consensus 245 ------~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~ 291 (334)
T cd05100 245 ------LFKLLKEGHRMDKPA----NCTHELYMIMRECWHAVPSQRPTFKQLVEDLD 291 (334)
T ss_pred ------HHHHHHcCCCCCCCC----CCCHHHHHHHHHHcccChhhCcCHHHHHHHHH
Confidence 11111111 111111 22346889999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-37 Score=306.64 Aligned_cols=257 Identities=24% Similarity=0.390 Sum_probs=203.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
.+|+..+.||+|+||+||+|+.+ +.+.|++|.+... ......+.+.+|++++++++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKT--KDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCc--cchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence 46888899999999999999754 3467999987543 222346789999999999999999999999999899
Q ss_pred eeEEEecccCCChHHHHhcCCCC------ccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEe
Q 005864 476 SFLVYECLERGSLAEILSNDGSI------KEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVS 549 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 549 (673)
.++||||+++|+|.+++...... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~ 159 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVS 159 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEc
Confidence 99999999999999999765422 2589999999999999999999999 99999999999999999999999
Q ss_pred cccceeecCCCC-CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccc
Q 005864 550 DFGIAKFLKPGS-SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEI 627 (673)
Q Consensus 550 Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~ 627 (673)
|||++....... .......++..|+|||.+.+..++.++||||||+++|||++ |..||....... .....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~--------~~~~~ 231 (275)
T cd05046 160 LLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE--------VLNRL 231 (275)
T ss_pred ccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH--------HHHHH
Confidence 999987542211 12233456778999999988888999999999999999998 788885322111 11111
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.......+. ....+..+.+++.+||+.+|++||++.|+++.|.+
T Consensus 232 ~~~~~~~~~--~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 232 QAGKLELPV--PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred HcCCcCCCC--CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 111111110 11233468999999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=316.43 Aligned_cols=244 Identities=25% Similarity=0.354 Sum_probs=199.2
Q ss_pred eeccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCC
Q 005864 409 CIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGS 487 (673)
Q Consensus 409 ~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 487 (673)
++|+|.||+||-|++.+ ..++|||-+.... ....+-+..|+...++++|.|||+++|.|.+++..-+.||-++||+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd---sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD---SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc---chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 59999999999998764 6679999886532 2346678899999999999999999999999999999999999999
Q ss_pred hHHHHhcCCCCccc--hHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-CCceEEecccceeecCCCCCCc
Q 005864 488 LAEILSNDGSIKEF--SWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-EYEARVSDFGIAKFLKPGSSNW 564 (673)
Q Consensus 488 L~~~l~~~~~~~~l--~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~~~~~~~~ 564 (673)
|.++++..= .++ .+.+.-.+.+||++||.|||++ .|||||||-.||+++. .|.+||+|||-++++..-+...
T Consensus 659 LSsLLrskW--GPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~T 733 (1226)
T KOG4279|consen 659 LSSLLRSKW--GPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCT 733 (1226)
T ss_pred HHHHHHhcc--CCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccCCccc
Confidence 999998642 234 6677778899999999999999 9999999999999975 5889999999999886656666
Q ss_pred eecccccccccccccccC--CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHH
Q 005864 565 TEFAGTFGYVAPELAYTM--KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDK 642 (673)
Q Consensus 565 ~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (673)
..+.||..|||||++..+ .|+.++|||||||+..||.||++||....... ...-..-+.....+ .+.+.
T Consensus 734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq-----AAMFkVGmyKvHP~----iPeel 804 (1226)
T KOG4279|consen 734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ-----AAMFKVGMYKVHPP----IPEEL 804 (1226)
T ss_pred cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh-----HhhhhhcceecCCC----CcHHH
Confidence 778899999999999865 48999999999999999999999986332111 11111111111222 23455
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 643 LISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 643 ~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.+...+|.+|+.+||.+||+++++++
T Consensus 805 saeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 805 SAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 667889999999999999999999875
|
|
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=306.24 Aligned_cols=240 Identities=22% Similarity=0.388 Sum_probs=188.8
Q ss_pred ceeccCCcEEEEEEEeCC--------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 408 QCIGIGGQASVYRGELPS--------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
+.||+|+||+||+|.... ...||+|.+... .....+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS---HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch---hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 469999999999996532 234888876542 223456788899999999999999999999998999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc--------eEEecc
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE--------ARVSDF 551 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--------~kl~Df 551 (673)
|||+++|+|.++++..+ ..+++..+..++.||+.|++|||+. +++||||||+||+++.++. ++++||
T Consensus 78 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~ 152 (258)
T cd05078 78 QEYVKFGSLDTYLKKNK--NLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152 (258)
T ss_pred EecCCCCcHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEeccc
Confidence 99999999999998754 3578899999999999999999999 9999999999999987765 699999
Q ss_pred cceeecCCCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCC-CCCcccccccccccccccccccccC
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGK-HPRDFISLLSSSSSNMNLSLNEILD 629 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~ 629 (673)
|.+...... ....++..|+|||++.+. .++.++||||||+++|||++|. .|+........ .....
T Consensus 153 g~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~---------~~~~~ 219 (258)
T cd05078 153 GISITVLPK----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKK---------LQFYE 219 (258)
T ss_pred ccccccCCc----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHH---------HHHHH
Confidence 988654321 234578899999998764 5788999999999999999985 55543221110 01111
Q ss_pred CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 630 PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 630 ~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+...+... ..++.+++.+||+.||++|||++++++.|+
T Consensus 220 ~~~~~~~~~----~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 220 DRHQLPAPK----WTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ccccCCCCC----cHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 122222222 245889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=306.34 Aligned_cols=251 Identities=25% Similarity=0.426 Sum_probs=200.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCC----EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGE----VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
.+|++.+.||+|+||.||+|..+ +|. .||+|....... .....++.+|+..+++++||||+++++++.. ...
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 83 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS--PKANKEILDEAYVMASVDHPHVVRLLGICLS-SQV 83 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC--HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence 56888899999999999999764 333 589998765432 3345778899999999999999999999987 788
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++|+||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++.+||+|||.++.
T Consensus 84 ~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNHK--DNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred EEEEecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCccccc
Confidence 99999999999999998754 3488999999999999999999998 999999999999999999999999999987
Q ss_pred cCCCCCCce--ecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CC
Q 005864 557 LKPGSSNWT--EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RL 632 (673)
Q Consensus 557 ~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 632 (673)
......... ...++..|+|||.+....++.++|+||||+++||+++ |+.||+.....+ ....+... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~--------~~~~~~~~~~~ 230 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE--------IPDLLEKGERL 230 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH--------HHHHHhCCCCC
Confidence 654332221 1223568999999988889999999999999999998 999987432211 11111111 11
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+.+.. .+..+.+++.+||..+|++||++.++++.|+
T Consensus 231 ~~~~~----~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~ 266 (279)
T cd05057 231 PQPPI----CTIDVYMVLVKCWMIDAESRPTFKELINEFS 266 (279)
T ss_pred CCCCC----CCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 11111 2245889999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-37 Score=313.23 Aligned_cols=194 Identities=20% Similarity=0.350 Sum_probs=159.9
Q ss_pred cceeccCCcEEEEEEEeC---CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--CCeeeEEEe
Q 005864 407 EQCIGIGGQASVYRGELP---SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH--PRHSFLVYE 481 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e 481 (673)
.+.||+|+||+||+|+.. +++.||+|.+.... ....+.+|+.++++++||||+++++++.. +...++|+|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-----ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-----CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 467999999999999764 56789999886432 12456789999999999999999999854 456789999
Q ss_pred cccCCChHHHHhcCC------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe----CCCCceEEecc
Q 005864 482 CLERGSLAEILSNDG------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL----SSEYEARVSDF 551 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Df 551 (673)
|+.+ +|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 9875 8888875432 123588899999999999999999999 99999999999999 45678999999
Q ss_pred cceeecCCCCC---CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcc
Q 005864 552 GIAKFLKPGSS---NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDF 609 (673)
Q Consensus 552 g~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~ 609 (673)
|+++....... ......+|+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred CceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 99987643322 22345789999999998764 588999999999999999999999863
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-37 Score=324.30 Aligned_cols=254 Identities=20% Similarity=0.247 Sum_probs=194.3
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
...|.+.+.||+|+||.||+|.+. .++.||||... ...+.+|++++++++|||||++++++..++..++|
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~---------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv 238 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW---------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLV 238 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc---------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 346889999999999999999775 58899999632 23456899999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
||++. ++|.+++.... ..+++.++..|+.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 239 ~e~~~-~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~ 312 (461)
T PHA03211 239 LPKYR-SDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARG 312 (461)
T ss_pred EEccC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceeccc
Confidence 99995 68998887543 3589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccccc-------C-
Q 005864 560 GSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEIL-------D- 629 (673)
Q Consensus 560 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------~- 629 (673)
.... .....||..|+|||++.+..++.++|||||||++|||++|..|+-........... ......++ +
T Consensus 313 ~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~-~~~l~~~i~~~~~~~~~ 391 (461)
T PHA03211 313 SWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPY-DAQILRIIRQAQVHVDE 391 (461)
T ss_pred ccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCc-HHHHHHHHHhhcccccc
Confidence 3221 22356899999999999999999999999999999999987664211100000000 00000000 0
Q ss_pred --------------------CCCCCCCcchH---HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 630 --------------------PRLPLPSRNIQ---DKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 630 --------------------~~~~~~~~~~~---~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.........+. .....+.+++.+||+.||.+|||+.|+++.
T Consensus 392 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 392 FPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred CCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00000001111 122368899999999999999999999874
|
|
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=303.53 Aligned_cols=251 Identities=27% Similarity=0.403 Sum_probs=199.2
Q ss_pred cCCCccceeccCCcEEEEEEEeCC----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
.+|.+.+.||+|+||.||+|.+.+ ...||+|....... ....+.+.+|+.++++++||||+++++++.+ ...+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~ 82 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS--PSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW 82 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC--HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence 457888999999999999997643 34689998765422 2345688999999999999999999999875 4578
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++|+|.+++.... ..+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++++|||+++..
T Consensus 83 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 83 IVMELAPLGELRSYLQVNK--YSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred EEEEcCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeec
Confidence 9999999999999997653 3589999999999999999999998 9999999999999999999999999999876
Q ss_pred CCCCCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccccccc-CCCCCC
Q 005864 558 KPGSSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEIL-DPRLPL 634 (673)
Q Consensus 558 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 634 (673)
...... .....++..|+|||.+....++.++||||||+++||+++ |..||......+. ...+. ..+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~--------~~~~~~~~~~~~ 229 (270)
T cd05056 158 EDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV--------IGRIENGERLPM 229 (270)
T ss_pred ccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH--------HHHHHcCCcCCC
Confidence 443221 122234568999999988889999999999999999996 9999864322111 00000 011122
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+. ..+.++.+++.+|+..+|.+|||+.++++.|+
T Consensus 230 ~~----~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~ 263 (270)
T cd05056 230 PP----NCPPTLYSLMTKCWAYDPSKRPRFTELKAQLS 263 (270)
T ss_pred CC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 21 23446889999999999999999999999886
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=312.27 Aligned_cols=261 Identities=23% Similarity=0.374 Sum_probs=201.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|.++ +++.||+|++....... ...+.+.+|+++++.++||||+++++++..++..++|+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 36888999999999999999875 58999999886543222 34567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.++.... ..+++.++..++.|+++|++|||+. +++|+||+|+||++++++.++++|||++......
T Consensus 80 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 80 EFVDHTVLDDLEKYP---NGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred ecCCccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 999999998887654 2378999999999999999999999 9999999999999999999999999999876554
Q ss_pred CCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc------cccccccccc-----
Q 005864 561 SSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS------NMNLSLNEIL----- 628 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~------~~~~~~~~~~----- 628 (673)
........++..|+|||++.+ ..++.++||||||+++|||++|+.||......+.... ..........
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07846 154 GEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPL 233 (286)
T ss_pred ccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchH
Confidence 444444567899999998875 4478899999999999999999999863221110000 0000000000
Q ss_pred -----CCCCCCCC---cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 629 -----DPRLPLPS---RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 629 -----~~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+...... ......+..+.+++.+||+.+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00000000 001123456899999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-37 Score=320.50 Aligned_cols=259 Identities=20% Similarity=0.287 Sum_probs=197.0
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-----
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP----- 473 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 473 (673)
..++|.+.+.||+|+||.||+|... .++.||||++...... ....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccC-chhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 3468999999999999999999764 6889999998754322 23356788899999999999999999987543
Q ss_pred -CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 474 -RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 474 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
...++||||+++ +|.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCC
Confidence 357999999976 77777753 377888999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc------------
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM------------ 620 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~------------ 620 (673)
+++..... .......++..|+|||++.+..++.++|||||||++|||++|+.||......+......
T Consensus 172 ~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (364)
T cd07875 172 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 250 (364)
T ss_pred CccccCCC-CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 99865332 22234568999999999999999999999999999999999999997433211100000
Q ss_pred --ccccccccC--------------CCC--CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 --NLSLNEILD--------------PRL--PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 --~~~~~~~~~--------------~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......... +.. +............+.+++.+|++.||.+|||+.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred hhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000000 000 0000011112346889999999999999999999986
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-37 Score=308.52 Aligned_cols=260 Identities=23% Similarity=0.372 Sum_probs=204.2
Q ss_pred ccHHHHHHHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeee
Q 005864 392 IVYEEIIRATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGF 469 (673)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 469 (673)
.++.++..+.+.|++.+.||+|+||.||+|.. .+++.||+|.+.... ....++..|+.++.++ +||||++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~e~~~l~~~~~h~~i~~~~~~ 81 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE----DEEEEIKLEINMLKKYSHHRNIATYYGA 81 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh----HHHHHHHHHHHHHHHhcCCCcEEEEeee
Confidence 34556666778899999999999999999976 468899999875432 2345678899999998 69999999999
Q ss_pred eec------CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC
Q 005864 470 CSH------PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543 (673)
Q Consensus 470 ~~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 543 (673)
+.. .+..+++|||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++++
T Consensus 82 ~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~ 157 (282)
T cd06636 82 FIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG-NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTEN 157 (282)
T ss_pred hhcccccCCCCEEEEEEEeCCCCcHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCC
Confidence 853 4578999999999999999976432 3477888899999999999999999 99999999999999999
Q ss_pred CceEEecccceeecCCCCCCceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc
Q 005864 544 YEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS 618 (673)
Q Consensus 544 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~ 618 (673)
+.++|+|||++..............++..|+|||.+. ...++.++|||||||++|||++|+.||.........
T Consensus 158 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~-- 235 (282)
T cd06636 158 AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRAL-- 235 (282)
T ss_pred CCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhh--
Confidence 9999999999876543333334466889999999875 345788999999999999999999998643221110
Q ss_pred ccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 619 NMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......... .......+.++.+++.+||+.||.+||++.|+++
T Consensus 236 ------~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 236 ------FLIPRNPPP--KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred ------hhHhhCCCC--CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 011111111 1111234456999999999999999999999975
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-37 Score=311.87 Aligned_cols=252 Identities=25% Similarity=0.412 Sum_probs=197.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCC----EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGE----VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
++|+..+.||+|+||.||+|.+. +|. .||+|.+.... ......++.+|+.+++.++||||++++|++..+ ..
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~ 83 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT--GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TI 83 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC--CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cc
Confidence 46788899999999999999763 444 57888876532 223345788999999999999999999998754 46
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++++||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~v~e~~~~g~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred eeeehhcCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccccccc
Confidence 79999999999999997653 3578899999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCC
Q 005864 557 LKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 557 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
....... .....++..|+|||++.+..++.++||||||+++|||++ |+.||........ ..... .....+
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~-----~~~~~--~~~~~~ 231 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREI-----PDLLE--KGERLP 231 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHH--CCCCCC
Confidence 6433221 122345678999999998899999999999999999997 9999864321100 00000 011111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+. ..+..+.+++.+||..+|++||+++++++.|+
T Consensus 232 ~~~----~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~ 266 (303)
T cd05110 232 QPP----ICTIDVYMVMVKCWMIDADSRPKFKELAAEFS 266 (303)
T ss_pred CCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111 12345889999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-37 Score=306.40 Aligned_cols=249 Identities=26% Similarity=0.420 Sum_probs=196.9
Q ss_pred ceeccCCcEEEEEEEeCC-------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 408 QCIGIGGQASVYRGELPS-------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+.||+|+||.||+|...+ ++.||+|.+.... .......+.+|+.+++.++||||+++++++...+..++||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 78 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA--TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIM 78 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc--chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEE
Confidence 368999999999997642 3579999876432 2234667889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCC----CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-----ceEEecc
Q 005864 481 ECLERGSLAEILSNDG----SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-----EARVSDF 551 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-----~~kl~Df 551 (673)
||+++++|.+++.... ....+++.++..++.|++.|++|||+. +++|+||+|+||+++.++ .++++||
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~df 155 (269)
T cd05044 79 ELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDF 155 (269)
T ss_pred eccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCc
Confidence 9999999999997532 123478899999999999999999998 999999999999999877 8999999
Q ss_pred cceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccccccc
Q 005864 552 GIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEIL 628 (673)
Q Consensus 552 g~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 628 (673)
|++........ ......++..|+|||++.++.++.++||||||+++|||++ |+.||......+. ...+.
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~--------~~~~~ 227 (269)
T cd05044 156 GLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEV--------LQHVT 227 (269)
T ss_pred ccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHH--------HHHHh
Confidence 99976533221 1122345678999999999999999999999999999998 9999863321110 00000
Q ss_pred C-CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 629 D-PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 629 ~-~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
. .....+ ...+..+.+++.+||..+|++||+++++++.|.+
T Consensus 228 ~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 228 AGGRLQKP----ENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred cCCccCCc----ccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 0 111111 2334568899999999999999999999999864
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=317.45 Aligned_cols=249 Identities=22% Similarity=0.328 Sum_probs=203.8
Q ss_pred CCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|+++..||.|+||.||+|..++ +-..|.|.+.. .......+|.-|+++|..++||+||++++.|..++..+++.||
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet---kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET---KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcc---cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence 4455679999999999997765 33455565533 3445688999999999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
|.||-+..++-.-+ ..+.+.++.-+++|++.||.|||++ .|+|||||+.||+++-+|.++++|||.+........
T Consensus 111 C~GGAVDaimlEL~--r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~q 185 (1187)
T KOG0579|consen 111 CGGGAVDAIMLELG--RVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQ 185 (1187)
T ss_pred cCCchHhHHHHHhc--cccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchhHHh
Confidence 99999999987765 5689999999999999999999999 999999999999999999999999999876655555
Q ss_pred Cceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 563 NWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
....+.|||.|||||+++ ..+|+.++||||||+++.||..+.+|.....+++..... ...-.+.+.
T Consensus 186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKi-----aKSePPTLl---- 256 (1187)
T KOG0579|consen 186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI-----AKSEPPTLL---- 256 (1187)
T ss_pred hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHH-----hhcCCCccc----
Confidence 567789999999999865 567999999999999999999999997654443321110 011111121
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+......+.+++.+||.+||..||++.|+++
T Consensus 257 qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 257 QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred CcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 22345567999999999999999999999985
|
|
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=309.83 Aligned_cols=262 Identities=22% Similarity=0.296 Sum_probs=201.4
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhh--hhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLS--EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
+|+..+.||+|+||.||+|... +|+.||+|.+...... .......+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778889999999999999764 6899999998765332 122345677899999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+ +|+|.+++.... ..+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 889999997653 3589999999999999999999999 999999999999999999999999999987765
Q ss_pred CCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccc------cc
Q 005864 560 GSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLS------LN 625 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~------~~ 625 (673)
.........+++.|+|||.+.+ ..++.++|||||||++|||++|..||......+..... .... ..
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
T cd07841 155 PNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLP 234 (298)
T ss_pred CCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccc
Confidence 4444444556788999998864 45788999999999999999998777533221100000 0000 00
Q ss_pred cccCCC--CCCC-CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 626 EILDPR--LPLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 626 ~~~~~~--~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
...... ...+ .......+..+.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000000 0000 00112234568899999999999999999999864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=307.17 Aligned_cols=250 Identities=25% Similarity=0.379 Sum_probs=203.6
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|++.+.||+|+||.||+|.. .+++.||+|.+... .....+.+..|+.+++.++|||++++++++..++..++|+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ---QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc---cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 6788999999999999999965 46889999987543 2223567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus 96 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~ 168 (293)
T cd06647 96 EYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (293)
T ss_pred ecCCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccc
Confidence 999999999999753 367889999999999999999999 9999999999999999999999999998766544
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........+++.|+|||.+....++.++||||||+++||+++|+.||.......... .....+.... ....
T Consensus 169 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~-------~~~~~~~~~~--~~~~ 239 (293)
T cd06647 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-------LIATNGTPEL--QNPE 239 (293)
T ss_pred ccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee-------ehhcCCCCCC--CCcc
Confidence 444444568889999999988889999999999999999999999997432211100 0000111111 1122
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
..+..+.+++.+||+.+|++||++.+++..
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 240 KLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 334568899999999999999999999863
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=302.45 Aligned_cols=252 Identities=28% Similarity=0.405 Sum_probs=202.6
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||+|+||.||+|... +++.|++|.++..... ....+.+.+|++++++++|+||+++++++...+..++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 4788899999999999999764 6899999998765333 3457889999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++.... .+++..+..++.|+++|+.|||+. +++|+||+|+||++++++.+||+|||++.......
T Consensus 80 ~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 80 YCSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred cCCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 999999999998653 478889999999999999999999 99999999999999999999999999998765433
Q ss_pred CCce----ecccccccccccccccCC---cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCC
Q 005864 562 SNWT----EFAGTFGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 562 ~~~~----~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
.... ...++..|+|||++.+.. ++.++||||||+++||+++|+.||........ .............
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~------~~~~~~~~~~~~~ 227 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQ------IMFHVGAGHKPPI 227 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHH------HHHHHhcCCCCCC
Confidence 3221 345788999999988766 88999999999999999999999864321000 0000000111111
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+. ....+..+.+++.+||+.+|.+||++.|++.
T Consensus 228 ~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 228 PD--SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred Cc--ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11 1123456889999999999999999999875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=302.51 Aligned_cols=247 Identities=29% Similarity=0.472 Sum_probs=198.9
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
++|.+.+.||+|+||.||++.. .++.||+|.+.... ....+.+|+.++.+++|||++++++++..+ ..++|||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e 78 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-----TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVME 78 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc-----hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEE
Confidence 4688899999999999999975 68889999886431 245788999999999999999999998764 4789999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++..... ..+++..+..++.|++.|+.|||+. +++||||||+||+++.++.++|+|||++......
T Consensus 79 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~- 153 (254)
T cd05083 79 LMSKGNLVNFLRTRGR-ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG- 153 (254)
T ss_pred CCCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceecccc-
Confidence 9999999999976542 3578899999999999999999998 9999999999999999999999999999764322
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
......+..|+|||++.+..++.++||||||+++|||++ |+.||......+. .+.+....... ...
T Consensus 154 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~---------~~~~~~~~~~~--~~~ 220 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEV---------KECVEKGYRME--PPE 220 (254)
T ss_pred --CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHH---------HHHHhCCCCCC--CCC
Confidence 122334578999999988899999999999999999997 9999864322111 01111111111 011
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+..+.+++.+||+.+|++||+++++++.|++
T Consensus 221 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 221 GCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 334568899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=311.25 Aligned_cols=247 Identities=25% Similarity=0.374 Sum_probs=198.4
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|+....||+|+||.||+|... +++.||+|.+..... ...+.+.+|+..+..++|||++++++++..++..++|+||
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~---~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~ 99 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEF 99 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc---chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEec
Confidence 444567999999999999764 689999999864322 2356688999999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++++|.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++|+|||++........
T Consensus 100 ~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~ 172 (297)
T cd06659 100 LQGGALTDIVSQ----TRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP 172 (297)
T ss_pred CCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccc
Confidence 999999998765 3478899999999999999999999 999999999999999999999999999876544433
Q ss_pred CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHH
Q 005864 563 NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDK 642 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (673)
......++..|+|||++.+..++.++||||||+++|||++|+.||......+... ........... .....
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~----~~~~~ 243 (297)
T cd06659 173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMK-----RLRDSPPPKLK----NAHKI 243 (297)
T ss_pred cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-----HHhccCCCCcc----ccCCC
Confidence 3344668899999999998889999999999999999999999986332211100 00000000111 11122
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 643 LISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 643 ~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+..+.+++.+||+.+|++||++.++++
T Consensus 244 ~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 244 SPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 345889999999999999999999987
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=302.77 Aligned_cols=251 Identities=22% Similarity=0.313 Sum_probs=196.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchh--hhhHHHHHHHHHHHHHhccCCCcccceeeeeec--CCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLL--SEISVQREFLNEIKALTEIRHRNIVKFYGFCSH--PRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 476 (673)
.+|+..+.||+|+||.||+|... +|+.||+|++..... ........+.+|+.++++++||||+++++++.+ +...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 36888999999999999999764 689999998864322 122345678899999999999999999999865 3567
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++++||+++++|.+++.... .+++.....++.|++.||+|||+. +++||||+|+||+++.++.++|+|||++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 89999999999999997653 478889999999999999999998 999999999999999999999999999976
Q ss_pred cCCCC---CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 557 LKPGS---SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 557 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
..... .......++..|+|||++.+..++.++||||+||++|||++|+.||.......... ........+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~----~~~~~~~~~~-- 229 (266)
T cd06651 156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIF----KIATQPTNPQ-- 229 (266)
T ss_pred cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHH----HHhcCCCCCC--
Confidence 54321 11223457889999999998889999999999999999999999987432211110 0000000111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........+.+++ .||..+|++||+++|+++
T Consensus 230 ----~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 230 ----LPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ----CchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 1122334466676 688899999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=301.75 Aligned_cols=238 Identities=25% Similarity=0.406 Sum_probs=188.6
Q ss_pred ceeccCCcEEEEEEEeCCCC-----------EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 408 QCIGIGGQASVYRGELPSGE-----------VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
+.||+|+||.||+|.+.+.. .|++|.+.... . ....+.+|+.++++++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH---R-DSLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch---h-hHHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 46899999999999775432 57778765432 1 15788899999999999999999999988 778
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-------ceEEe
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-------EARVS 549 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-------~~kl~ 549 (673)
++|+||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++ .+|++
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~ 150 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREK--NNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLS 150 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeC
Confidence 99999999999999998754 2578899999999999999999999 999999999999999887 79999
Q ss_pred cccceeecCCCCCCceecccccccccccccccC--CcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccccc
Q 005864 550 DFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTM--KVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNE 626 (673)
Q Consensus 550 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~ 626 (673)
|||++..... .....++..|+|||++.+. .++.++||||||+++|||++ |..||......+. .....
T Consensus 151 Dfg~a~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~-----~~~~~- 220 (259)
T cd05037 151 DPGIPITVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK-----ERFYQ- 220 (259)
T ss_pred CCCccccccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH-----HHHHh-
Confidence 9999986543 2234566789999998876 78999999999999999999 5777653321100 00000
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 627 ILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.....+.+. ...+.+++.+||..+|.+|||+.++++.|+
T Consensus 221 -~~~~~~~~~------~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 221 -DQHRLPMPD------CAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred -cCCCCCCCC------chHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 011111111 146889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=340.76 Aligned_cols=257 Identities=21% Similarity=0.320 Sum_probs=199.0
Q ss_pred HHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--CCe
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH--PRH 475 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~ 475 (673)
...++|.+.+.||+|+||+||+|... ++..||+|.+...... ......+..|+.++..++|||||+++++|.. ...
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~-e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK-EREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 34468999999999999999999765 5778999988654322 2346778999999999999999999998854 456
Q ss_pred eeEEEecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCC----CCeEEecCCCCCeEeCCC-------
Q 005864 476 SFLVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCF----PPIVHRDISSKNVLLSSE------- 543 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~----~~ivH~dlk~~Nill~~~------- 543 (673)
.++||||+++|+|.+++.... ....+++..++.|+.||+.||+|||+... .+|+||||||+|||++.+
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 899999999999999997532 22458999999999999999999998521 259999999999999642
Q ss_pred ----------CceEEecccceeecCCCCCCceeccccccccccccccc--CCcCcchhHHHHHHHHHHHHhCCCCCcccc
Q 005864 544 ----------YEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFIS 611 (673)
Q Consensus 544 ----------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 611 (673)
..+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~ 247 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN 247 (1021)
T ss_pred cccccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence 348999999998664322 2234578999999999854 458899999999999999999999997432
Q ss_pred cccccccccccccccccC-CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 612 LLSSSSSNMNLSLNEILD-PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.... ....+.. +.++. ...+.++.++|..||+.+|.+||++.|+++
T Consensus 248 ~~~q-------li~~lk~~p~lpi-----~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 248 NFSQ-------LISELKRGPDLPI-----KGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred cHHH-------HHHHHhcCCCCCc-----CCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 2111 1111111 11111 122456889999999999999999999984
|
|
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-37 Score=309.60 Aligned_cols=262 Identities=24% Similarity=0.363 Sum_probs=203.4
Q ss_pred ccHHHHHHHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeee
Q 005864 392 IVYEEIIRATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGF 469 (673)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 469 (673)
+.++++..+.++|++.+.||+|+||.||+|.. .+++.+|+|.+.... .....+.+|+.++.++ +|||+++++++
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~~e~~~l~~l~~h~ni~~~~~~ 87 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS----DVDEEIEAEYNILQSLPNHPNVVKFYGM 87 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc----cHHHHHHHHHHHHHHhcCCCCeEEEEEE
Confidence 34456666788999999999999999999976 468899999886431 1245677899999999 89999999999
Q ss_pred eecC-----CeeeEEEecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC
Q 005864 470 CSHP-----RHSFLVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543 (673)
Q Consensus 470 ~~~~-----~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 543 (673)
+... +..++|+||+++|+|.++++... ....+++..+..++.|++.||+|||+. +++||||||+||+++.+
T Consensus 88 ~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~ 164 (291)
T cd06639 88 FYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTE 164 (291)
T ss_pred EEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCC
Confidence 8653 35799999999999999986421 224588999999999999999999999 99999999999999999
Q ss_pred CceEEecccceeecCCCCCCceecccccccccccccccC-----CcCcchhHHHHHHHHHHHHhCCCCCccccccccccc
Q 005864 544 YEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTM-----KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS 618 (673)
Q Consensus 544 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~ 618 (673)
+.+||+|||++..............++..|+|||.+... .++.++|||||||++|||++|+.||...........
T Consensus 165 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~ 244 (291)
T cd06639 165 GGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFK 244 (291)
T ss_pred CCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHH
Confidence 999999999988664433333345678899999987543 368899999999999999999999864322111000
Q ss_pred ccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 619 NMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+.+.. .......+.+++.+||+.+|++||++.|+++
T Consensus 245 -----~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 245 -----IPRNPPPTLLH----PEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred -----HhcCCCCCCCc----ccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 00000011111 1123346889999999999999999999986
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=305.80 Aligned_cols=257 Identities=26% Similarity=0.317 Sum_probs=199.7
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--CCeeeEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH--PRHSFLV 479 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv 479 (673)
+|+..+.||.|++|.||+|... +++.+|+|.+..... ......+.+|++++++++||||+++++++.. .+..++|
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 79 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN--PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIA 79 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc--hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEE
Confidence 5778899999999999999774 688999998865422 2346778999999999999999999999865 3468999
Q ss_pred EecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 480 YECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|||+++++|.+++.... ....+++..+..++.|+++||+|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 80 MEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156 (287)
T ss_pred EEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence 99999999999876422 224578889999999999999999999 99999999999999999999999999987553
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC---CCCCCC
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD---PRLPLP 635 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 635 (673)
... .....++..|+|||.+.+..++.++||||+|+++|||++|+.||+........ .........+ +.+...
T Consensus 157 ~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd06621 157 NSL--AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLG---PIELLSYIVNMPNPELKDE 231 (287)
T ss_pred ccc--cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCC---hHHHHHHHhcCCchhhccC
Confidence 222 12345788999999999889999999999999999999999998744220000 0000111111 111111
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.......+..+.+++.+||+.+|++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 232 PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 1111223457899999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-37 Score=316.52 Aligned_cols=259 Identities=22% Similarity=0.317 Sum_probs=195.7
Q ss_pred HHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC----
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP---- 473 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---- 473 (673)
...++|.+.+.||+|+||+||+|.. .+++.||||++...... ....+.+.+|+.++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQS-LIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhh-hHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 3457899999999999999999975 46889999998754322 22345677899999999999999999987543
Q ss_pred --CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecc
Q 005864 474 --RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551 (673)
Q Consensus 474 --~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 551 (673)
...++++|++ +++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKCQ----KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCC
Confidence 3468999987 67999887643 488999999999999999999999 9999999999999999999999999
Q ss_pred cceeecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-------ccccc
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-------NMNLS 623 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-------~~~~~ 623 (673)
|+++..... .....+++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+.... .....
T Consensus 163 g~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T cd07878 163 GLARQADDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEV 239 (343)
T ss_pred ccceecCCC---cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 999865432 234568999999999876 5688999999999999999999999864322111000 00000
Q ss_pred cccc-------cCCCCCC-CCcc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 LNEI-------LDPRLPL-PSRN----IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 ~~~~-------~~~~~~~-~~~~----~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+ ....++. +... .......+.+++.+|++.||.+|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 240 LKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred HHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 0000000 0000 0112235789999999999999999999985
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=305.86 Aligned_cols=254 Identities=26% Similarity=0.404 Sum_probs=201.7
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCC---
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPR--- 474 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~--- 474 (673)
++++|++.+.||+|++|.||+|... +++.|++|.+..... ..+.+.+|+.+++++ +||||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED----EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch----hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 5678999999999999999999775 688999998865422 346788999999999 7999999999996544
Q ss_pred ---eeeEEEecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEec
Q 005864 475 ---HSFLVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSD 550 (673)
Q Consensus 475 ---~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 550 (673)
..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++++|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 4899999999999999987532 124688999999999999999999999 999999999999999999999999
Q ss_pred ccceeecCCCCCCceeccccccccccccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccc
Q 005864 551 FGIAKFLKPGSSNWTEFAGTFGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625 (673)
Q Consensus 551 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 625 (673)
||.+..............++..|+|||++.. ..++.++||||||+++|||++|+.||........ ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--------~~ 228 (275)
T cd06608 157 FGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRA--------LF 228 (275)
T ss_pred CccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHH--------HH
Confidence 9999876544333445668899999998753 3467899999999999999999999864322111 01
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
++.....+ ........+..+.+++.+||..||++|||+.|+++
T Consensus 229 ~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 229 KIPRNPPP-TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred HhhccCCC-CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11111110 01111224557889999999999999999999986
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=301.65 Aligned_cols=253 Identities=24% Similarity=0.357 Sum_probs=203.4
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--CCeeeEE
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH--PRHSFLV 479 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv 479 (673)
+|++.+.||.|+||.||+|.. .+|+.||+|.+..... .....+.+..|++++++++||||+++++++.. +...+++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM-TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC-CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 477889999999999999965 4688999998865432 23345678899999999999999999998764 4567899
Q ss_pred EecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHh-----hcCCCCeEEecCCCCCeEeCCCCceEEecccc
Q 005864 480 YECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMH-----HDCFPPIVHRDISSKNVLLSSEYEARVSDFGI 553 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH-----~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 553 (673)
+||+++++|.+++.... ....+++..++.++.|++.|++||| +. +++|+||+|+||++++++.+|++|||+
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~d~g~ 156 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLGDFGL 156 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEecccc
Confidence 99999999999997642 2356899999999999999999999 66 999999999999999999999999999
Q ss_pred eeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
+..............+++.|+|||.+.+..++.++||||||+++|+|++|+.||+..... .....+.....+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~ 228 (265)
T cd08217 157 AKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL--------QLASKIKEGKFR 228 (265)
T ss_pred cccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH--------HHHHHHhcCCCC
Confidence 987755443334457889999999999888999999999999999999999998743211 111111111111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
. .....+..+.+++.+|++.+|++||++.+|++.
T Consensus 229 ~---~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 229 R---IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred C---CccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1 112334568899999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=303.31 Aligned_cols=248 Identities=26% Similarity=0.401 Sum_probs=201.9
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+-|+..+.||+|+||.||+|.. .+++.||+|.+.... .....+.+.+|+..+.+++||||+++++++..++..++||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 81 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE--AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 81 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEE
Confidence 3477888999999999999976 468999999876432 2234567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++++|||++......
T Consensus 82 e~~~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06641 82 EYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 154 (277)
T ss_pred EeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccc
Confidence 999999999998753 478899999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........++..|+|||++.+..++.++|||||||++|+|++|..||........ ...+.....+ ....
T Consensus 155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~---~~~~ 223 (277)
T cd06641 155 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKV--------LFLIPKNNPP---TLEG 223 (277)
T ss_pred hhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHH--------HHHHhcCCCC---CCCc
Confidence 3333445678899999999888899999999999999999999999863321110 0001011111 1112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.++.+++.+||+.+|.+||++.++++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 224 NYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 33456889999999999999999999987
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=333.20 Aligned_cols=255 Identities=25% Similarity=0.386 Sum_probs=201.4
Q ss_pred HHHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC---
Q 005864 398 IRATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--- 473 (673)
Q Consensus 398 ~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--- 473 (673)
.+...+|+..+.||+||||.||+++.+ ||+.||||++.... .......+.+|+..+.+++|||||+++..|.+.
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~ 552 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAE 552 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCc
Confidence 467778899999999999999999876 89999999997764 445577889999999999999999997543110
Q ss_pred --------------------------------------------------------------------------------
Q 005864 474 -------------------------------------------------------------------------------- 473 (673)
Q Consensus 474 -------------------------------------------------------------------------------- 473 (673)
T Consensus 553 ~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~ 632 (1351)
T KOG1035|consen 553 LTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSN 632 (1351)
T ss_pred cccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccc
Confidence
Q ss_pred ------------------------------------CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHH
Q 005864 474 ------------------------------------RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANAL 517 (673)
Q Consensus 474 ------------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l 517 (673)
...||-||||+..++.++++...-.. .....++++.+|+.|+
T Consensus 633 tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGL 710 (1351)
T KOG1035|consen 633 TSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGL 710 (1351)
T ss_pred ccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHH
Confidence 01378899999988888887653211 4577889999999999
Q ss_pred HHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC------------------CCCCCceeccccccccccccc
Q 005864 518 SYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK------------------PGSSNWTEFAGTFGYVAPELA 579 (673)
Q Consensus 518 ~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~------------------~~~~~~~~~~~~~~y~aPE~~ 579 (673)
+|+|++ |||||||||.|||++++..|||+|||+|.... .+....+..+||.-|+|||.+
T Consensus 711 aYIH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 711 AYIHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHHHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 999999 99999999999999999999999999998721 011134567899999999998
Q ss_pred ccCC---cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccC
Q 005864 580 YTMK---VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEE 656 (673)
Q Consensus 580 ~~~~---~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 656 (673)
.+.. |+.|+|+||+|+|++||+. ||...- + ....+....++.++.+...+......-..+|.+++++
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsM--E-----Ra~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~h 857 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSM--E-----RASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSH 857 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHhc---cCCchH--H-----HHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcC
Confidence 7654 9999999999999999994 454211 0 1122334446666666555555556677899999999
Q ss_pred CCCCCCCHHHHHH
Q 005864 657 SPESRPTMQTVCQ 669 (673)
Q Consensus 657 dp~~Rps~~~v~~ 669 (673)
||.+|||+.|++.
T Consensus 858 dP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 858 DPSKRPTATELLN 870 (1351)
T ss_pred CCccCCCHHHHhh
Confidence 9999999999985
|
|
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=300.92 Aligned_cols=251 Identities=26% Similarity=0.413 Sum_probs=207.1
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|++.+.||+|++|.||+|... +|+.|++|++...... ...+.+.+|+..+.+++|||++++++++..++..++|+|
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence 6888899999999999999776 5999999998764322 346789999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH-DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|+++++|.+++... ..+++..+..++.|+++|++|||+ . +++|+||+|+||+++.++.++++|||.+......
T Consensus 80 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 80 YMDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred ecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 99999999999865 357889999999999999999999 8 9999999999999999999999999999877554
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........++..|+|||.+.+..++.++||||||+++|||++|+.||...... ........+.....+.. ..
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~---~~ 225 (264)
T cd06623 154 LDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP-----SFFELMQAICDGPPPSL---PA 225 (264)
T ss_pred CCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc-----CHHHHHHHHhcCCCCCC---Cc
Confidence 44434556788999999999888999999999999999999999998744310 00011111111111111 11
Q ss_pred H-HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 D-KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~-~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
. .+..+.+++.+||+.+|++||++.|+++
T Consensus 226 ~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 226 EEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred ccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 1 4456999999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=299.20 Aligned_cols=250 Identities=29% Similarity=0.459 Sum_probs=200.8
Q ss_pred CCccceeccCCcEEEEEEEeCC-----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 404 FDAEQCIGIGGQASVYRGELPS-----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
+++.+.||.|+||.||++...+ +..||+|.+...... ...+.+..|+..+..++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADE--QQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCCh--HHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 3567889999999999997753 488999998654222 246789999999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
+|||+++++|.+++..... ..+++.++..++.|++.|++|||+. +++|+||+|+||++++++.++++|||++....
T Consensus 79 i~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLY 154 (258)
T ss_pred EEeccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceecc
Confidence 9999999999999976532 1289999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCce-ecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCC-CCCC
Q 005864 559 PGSSNWT-EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPR-LPLP 635 (673)
Q Consensus 559 ~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 635 (673)
....... ...+++.|+|||.+.+..++.++||||+|+++|||++ |..||....... ....+.... ...+
T Consensus 155 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~ 226 (258)
T smart00219 155 DDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEE--------VLEYLKKGYRLPKP 226 (258)
T ss_pred cccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHHHHhcCCCCCCC
Confidence 4322211 2336789999999988889999999999999999998 788876321111 011111111 1111
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L 671 (673)
...+.++.+++.+|+..||++|||+.|+++.|
T Consensus 227 ----~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 227 ----ENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ----CcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 12345688999999999999999999999875
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=304.61 Aligned_cols=253 Identities=24% Similarity=0.374 Sum_probs=203.3
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||+|+||.||+|... +++.||+|.+..... ....+.+.+|++.+++++||||+++++++..++..++++|
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN--EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC--hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence 5778899999999999999775 689999998876432 2346778899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH-DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|+++++|.+++.... ..+++..+..++.|++.|++|||+ . +++|+||+|+||++++++.++|+|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 80 YMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred ecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 999999999998653 457888999999999999999999 7 9999999999999999999999999998765322
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.. ....++..|+|||.+.+..++.++||||+|+++|+|++|+.||....... ...............+... ..
T Consensus 155 ~~--~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~--~~ 227 (265)
T cd06605 155 LA--KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPP---DGIFELLQYIVNEPPPRLP--SG 227 (265)
T ss_pred Hh--hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccccc---ccHHHHHHHHhcCCCCCCC--hh
Confidence 21 12667889999999998899999999999999999999999986432100 0001111112222111110 11
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.++.+++.+||..+|++|||+.|+++
T Consensus 228 ~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 228 KFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred hcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 14556899999999999999999999985
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=300.04 Aligned_cols=249 Identities=27% Similarity=0.381 Sum_probs=201.4
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhh--hhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLS--EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
+|+..+.||+|+||.||+|... +++.|++|.+...... ..+..+.+.+|+++++.++||||+++++++..+...+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677889999999999999776 7999999988653321 233457789999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
+||+++++|.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 99999999999997653 478899999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCceecccccccccccccccCC-cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC-CCCCCCCc
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD-PRLPLPSR 637 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 637 (673)
.. ......++..|+|||.+.... ++.++|+||||+++|+|++|+.||......... ..... ...+.
T Consensus 155 ~~-~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~--------~~~~~~~~~~~--- 222 (258)
T cd06632 155 FS-FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAV--------FKIGRSKELPP--- 222 (258)
T ss_pred cc-cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHH--------HHHHhcccCCC---
Confidence 32 223456788999999987766 899999999999999999999998643211110 00000 01111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........+.+++.+||+.+|++||++.++++
T Consensus 223 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 223 IPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 11123456889999999999999999999975
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=302.14 Aligned_cols=255 Identities=24% Similarity=0.381 Sum_probs=199.6
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhh-------hHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSE-------ISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
+|...+.||+|+||.||+|... +|+.||+|.++...... ....+.+.+|+.++..++|||++++++++..++
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4667889999999999999654 68999999886432111 112456888999999999999999999999999
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++|+||+++|+|.+++... ..+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++++|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccc
Confidence 999999999999999999775 3578889999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC--CceecccccccccccccccCC--cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC
Q 005864 555 KFLKPGSS--NWTEFAGTFGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP 630 (673)
Q Consensus 555 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 630 (673)
........ ......++..|+|||.+.... ++.++||||+|+++||+++|..||........... .... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~~~--~~ 229 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFK----LGNK--RS 229 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHH----hhcc--cc
Confidence 76533211 122345788999999987654 78999999999999999999999863322111000 0000 01
Q ss_pred CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 631 RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 631 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.......+.++.+++.+||+.+|++||+++||++
T Consensus 230 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 230 APPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred CCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 111111222234567899999999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=307.25 Aligned_cols=260 Identities=19% Similarity=0.292 Sum_probs=197.4
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||+|+||.||+|... +|+.||+|+++.... .......+.+|++++++++||||+++++++.+.+..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc-cccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 4788899999999999999775 699999999865322 12234567789999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++ +|.+++.... ..+++..+..++.||++||.|||+. +++||||||+||+++.++.++|+|||++.......
T Consensus 80 ~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 80 YCDQ-DLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred cCCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 9975 8888876543 3589999999999999999999999 99999999999999999999999999998665443
Q ss_pred CCceecccccccccccccccCC-cCcchhHHHHHHHHHHHHhCCCCCcccccccccc--------ccccc---ccccccC
Q 005864 562 SNWTEFAGTFGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS--------SNMNL---SLNEILD 629 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~--------~~~~~---~~~~~~~ 629 (673)
.......++..|+|||.+.+.. ++.++|||||||++|||++|+.|+.......... ..... ......+
T Consensus 154 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07839 154 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPD 233 (284)
T ss_pred CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccc
Confidence 3334456788999999887644 6899999999999999999999864221110000 00000 0000000
Q ss_pred C-CCCCCC------cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 630 P-RLPLPS------RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 630 ~-~~~~~~------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
. ..+... ......+.++.+++.+||+.||.+|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 234 YKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0 000000 001123456889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=302.49 Aligned_cols=248 Identities=27% Similarity=0.436 Sum_probs=200.6
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC---CCcccceeeeeecCCeeeE
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR---HRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~l 478 (673)
.|+..+.||+|+||.||+|.+ .+++.||+|.+.... .....+++.+|+.++++++ |||++++++++..+...++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT--PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC--CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 477788999999999999976 578999999886532 2234567888999999997 9999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
||||+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||+|+||++++++.++++|||++....
T Consensus 80 v~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLN 152 (277)
T ss_pred EEecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence 99999999999998653 578999999999999999999999 99999999999999999999999999998876
Q ss_pred CCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
..........|+..|+|||++.++ .++.++||||||+++|+|++|+.||.......... .......+.++.
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~--- 224 (277)
T cd06917 153 QNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMM-----LIPKSKPPRLED--- 224 (277)
T ss_pred CCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhh-----ccccCCCCCCCc---
Confidence 544444455788999999988654 46889999999999999999999987432211100 000000111111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+.++.+++.+||+.||++||++.|+++
T Consensus 225 --~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 225 --NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred --ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 113456889999999999999999999975
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-36 Score=305.61 Aligned_cols=260 Identities=20% Similarity=0.309 Sum_probs=196.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|+..+.||+|++|.||+|..+ +++.||+|.+...... .....+.+|++++++++||||+++++++.+++..++||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE--GAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVF 82 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc--CCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEE
Confidence 57888999999999999999765 6899999998654222 12345678999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++ +|.+++.... ..+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+||+|||+++.....
T Consensus 83 e~~~~-~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 156 (291)
T cd07844 83 EYLDT-DLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVP 156 (291)
T ss_pred ecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCC
Confidence 99985 9999987654 3578899999999999999999999 9999999999999999999999999998754322
Q ss_pred CCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccc--------cccccccc------
Q 005864 561 SSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS--------SNMNLSLN------ 625 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~--------~~~~~~~~------ 625 (673)
........++..|+|||++.+ ..++.++||||+|+++|||++|+.||.......... ......+.
T Consensus 157 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07844 157 SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNP 236 (291)
T ss_pred CccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcc
Confidence 222233346788999998865 457899999999999999999999986433110000 00000000
Q ss_pred cccCCCCCCC--Cc---chHHH--HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 EILDPRLPLP--SR---NIQDK--LISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ~~~~~~~~~~--~~---~~~~~--~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+......... .. ..... ...+.+++.+|++.+|++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 237 EFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0000000000 00 00001 145789999999999999999999875
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=305.35 Aligned_cols=252 Identities=27% Similarity=0.420 Sum_probs=206.0
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
.++.|+..+.||+|++|.||+|.++ +++.|++|.+..... ..+.+.+|++.++.++|+|++++++++..++..++
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence 4567888899999999999999776 689999999865422 35678899999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|+||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus 93 v~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 167 (286)
T cd06614 93 VMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLT 167 (286)
T ss_pred EEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence 999999999999998754 3689999999999999999999998 99999999999999999999999999987654
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
..........++..|+|||++.+..++.++||||||+++|+|++|+.||......... ..+.....+ ....
T Consensus 168 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~--------~~~~~~~~~-~~~~ 238 (286)
T cd06614 168 KEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRAL--------FLITTKGIP-PLKN 238 (286)
T ss_pred cchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHH--------HHHHhcCCC-CCcc
Confidence 4333334455788999999998888999999999999999999999998643222110 011111111 0011
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+..+.+++.+||+.+|.+||++.++++
T Consensus 239 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 239 PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred hhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 1223456889999999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-37 Score=303.67 Aligned_cols=250 Identities=26% Similarity=0.338 Sum_probs=204.8
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|++.+.||.|+||.||+|... +++.||+|.+...........+.+.+|++++++++||||+++++++.++...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999775 699999999876544444457789999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++... ..+++..+..++.|+++||.|||+. +++|+||+|+||++++++.++++|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 99999999999765 3578899999999999999999999 99999999999999999999999999988664332
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC-CCCCCCCcchH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD-PRLPLPSRNIQ 640 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 640 (673)
......++..|+|||.+.+..++.++|+||+|+++|+|++|+.||...... .......... .....+ .
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~----~ 223 (258)
T cd05578 155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT------IRDQIRAKQETADVLYP----A 223 (258)
T ss_pred -cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc------HHHHHHHHhccccccCc----c
Confidence 233456788999999998888999999999999999999999998743221 0001111111 111211 1
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCH--HHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTM--QTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~--~~v~~ 669 (673)
..+..+.+++.+||+.||.+||++ +|+++
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~ 254 (258)
T cd05578 224 TWSTEAIDAINKLLERDPQKRLGDNLKDLKN 254 (258)
T ss_pred cCcHHHHHHHHHHccCChhHcCCccHHHHhc
Confidence 233568899999999999999999 77653
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=305.95 Aligned_cols=262 Identities=21% Similarity=0.253 Sum_probs=196.2
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
+++.|.+.+.||+|+||.||+|... +|+.||+|.+...... .....+.+|+.+++.++|+||+++++++..++..++
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 80 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE--GVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTF 80 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC--CCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEE
Confidence 3467999999999999999999664 6899999998654221 223466789999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|+||++ +++.+++.... ..+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++|+|||+++...
T Consensus 81 v~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 154 (291)
T cd07870 81 VFEYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKS 154 (291)
T ss_pred EEeccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccC
Confidence 999996 68877775432 3467788889999999999999999 99999999999999999999999999997654
Q ss_pred CCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccc--------ccc----------
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS--------SSN---------- 619 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~--------~~~---------- 619 (673)
..........+++.|+|||.+.+. .++.++||||||+++|||++|+.||+........ ...
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07870 155 IPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSK 234 (291)
T ss_pred CCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhh
Confidence 333333344578899999998754 5788999999999999999999999743221000 000
Q ss_pred cccccccccCCCCCCCC-cch--HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 620 MNLSLNEILDPRLPLPS-RNI--QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 620 ~~~~~~~~~~~~~~~~~-~~~--~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+......+... ..+ ......+.+++.+|++.||++|||++|++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 235 LPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00000000000000000 000 011346889999999999999999999874
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=319.35 Aligned_cols=253 Identities=21% Similarity=0.249 Sum_probs=195.3
Q ss_pred cCCCccceeccCCcEEEEEEEeC---CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP---SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
.+|.+.+.||+|+||.||++... .++.||+|.+... +...+|++++++++||||+++++++......++
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l 163 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--------KTPGREIDILKTISHRAIINLIHAYRWKSTVCM 163 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence 57999999999999999999653 4678999987542 234579999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|||++. ++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++....
T Consensus 164 v~e~~~-~~l~~~l~~~---~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~ 236 (392)
T PHA03207 164 VMPKYK-CDLFTYVDRS---GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLD 236 (392)
T ss_pred EehhcC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccC
Confidence 999986 5888888543 4589999999999999999999999 99999999999999999999999999997664
Q ss_pred CCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccc-----------------cc
Q 005864 559 PGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS-----------------SN 619 (673)
Q Consensus 559 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-----------------~~ 619 (673)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ..
T Consensus 237 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~ 316 (392)
T PHA03207 237 AHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQN 316 (392)
T ss_pred cccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCc
Confidence 4322 1234578999999999999899999999999999999999999986432210000 00
Q ss_pred cc----cc---cccccCCCCCCCCc-chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 620 MN----LS---LNEILDPRLPLPSR-NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 620 ~~----~~---~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.. .. ......+....+.. .......++.+++.+||..||++|||+.|++.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 317 GSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred cchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 00 00 00000111111000 00112346788999999999999999999985
|
|
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=306.25 Aligned_cols=248 Identities=26% Similarity=0.405 Sum_probs=198.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
..|+..+.||+|+||+||+|... +|+.||+|.+...........+++.+|+++++.++||||+++++++..++..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45888899999999999999765 68999999886543333344567899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||++ |++.+++.... ..+++..+..++.|++.||.|||+. +++||||+|+||++++++.++|+|||++......
T Consensus 95 e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 95 EYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred HhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 9997 47877776433 3588999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCCceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 561 SSNWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
....++..|+|||.+. ...++.++||||||+++|||++|+.||......... ..+.....+ ..
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~--------~~~~~~~~~--~~ 234 (307)
T cd06607 169 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL--------YHIAQNDSP--TL 234 (307)
T ss_pred ----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHH--------HHHhcCCCC--CC
Confidence 2345788999999874 456888999999999999999999998643221110 000000000 01
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+..+.+++.+||+.+|++||++.++++
T Consensus 235 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 235 SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred CchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 11234456899999999999999999999986
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-36 Score=326.27 Aligned_cols=260 Identities=19% Similarity=0.211 Sum_probs=190.5
Q ss_pred HHHHHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCC------Ccccceee
Q 005864 396 EIIRATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH------RNIVKFYG 468 (673)
Q Consensus 396 ~~~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~l~~ 468 (673)
++....++|++.+.||+|+||+||+|... .++.||||+++... ...+.+..|++++..++| ++++++++
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~ 198 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP----KYTRDAKIEIQFMEKVRQADPADRFPLMKIQR 198 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch----hhHHHHHHHHHHHHHHhhcCcccCcceeeeEE
Confidence 33445678999999999999999999764 58889999986421 123345567777766654 45889999
Q ss_pred eeecC-CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEeCCCC--
Q 005864 469 FCSHP-RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH-DCFPPIVHRDISSKNVLLSSEY-- 544 (673)
Q Consensus 469 ~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~-- 544 (673)
++..+ ...++|||++ +++|.+++...+ .+++..+..|+.||+.||+|||+ . +|+||||||+||+++.++
T Consensus 199 ~~~~~~~~~~iv~~~~-g~~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~ 271 (467)
T PTZ00284 199 YFQNETGHMCIVMPKY-GPCLLDWIMKHG---PFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTV 271 (467)
T ss_pred EEEcCCceEEEEEecc-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCcc
Confidence 88764 5688999987 668999887653 48889999999999999999997 5 999999999999998765
Q ss_pred --------------ceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccc
Q 005864 545 --------------EARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFI 610 (673)
Q Consensus 545 --------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 610 (673)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||+..
T Consensus 272 ~~~~~~~~~~~~~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~ 348 (467)
T PTZ00284 272 VDPVTNRALPPDPCRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH 348 (467)
T ss_pred cccccccccCCCCceEEECCCCccccCc---cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 49999999876432 2234567899999999999999999999999999999999999999753
Q ss_pred cccccccc-------cccc--------ccccccCCC--CC--CCCc-----------chHHHHHHHHHHHHHcccCCCCC
Q 005864 611 SLLSSSSS-------NMNL--------SLNEILDPR--LP--LPSR-----------NIQDKLISILEVALLCLEESPES 660 (673)
Q Consensus 611 ~~~~~~~~-------~~~~--------~~~~~~~~~--~~--~~~~-----------~~~~~~~~l~~li~~cl~~dp~~ 660 (673)
...+.... .... ...+.++.. +. .... ........+.+|+.+||+.||++
T Consensus 349 ~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~ 428 (467)
T PTZ00284 349 DNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQK 428 (467)
T ss_pred ChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhh
Confidence 32111000 0000 000000000 00 0000 00011245789999999999999
Q ss_pred CCCHHHHHH
Q 005864 661 RPTMQTVCQ 669 (673)
Q Consensus 661 Rps~~~v~~ 669 (673)
|||++|+++
T Consensus 429 R~ta~e~L~ 437 (467)
T PTZ00284 429 RLNARQMTT 437 (467)
T ss_pred CCCHHHHhc
Confidence 999999985
|
|
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-36 Score=297.33 Aligned_cols=250 Identities=21% Similarity=0.306 Sum_probs=201.7
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||+|+||.||+|... +++.+|+|.+...... ....+.+.+|++++++++|||++++++.+..++..++|+|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT-KDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc-cHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 4788899999999999999664 6889999998654322 2346789999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-CceEEecccceeecCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFGIAKFLKPG 560 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~~~~~~~ 560 (673)
|+++++|.+++.... ...+++..+..++.++++|++|||++ +++|+||+|+||+++++ +.++++|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 80 YAPGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred cCCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 999999999997643 24578899999999999999999999 99999999999999865 46899999999876443
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.. .....++..|+|||.+.+..++.++||||||+++|+|++|+.||+...... ....+....... ...
T Consensus 156 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~--------~~~~~~~~~~~~---~~~ 223 (256)
T cd08220 156 SK-AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA--------LVLKIMSGTFAP---ISD 223 (256)
T ss_pred cc-ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH--------HHHHHHhcCCCC---CCC
Confidence 22 233567889999999988889999999999999999999999986432111 111111111110 011
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+..+.+++.+||+.+|.+|||+.|+++
T Consensus 224 ~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 224 RYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred CcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 23446889999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=302.83 Aligned_cols=247 Identities=25% Similarity=0.283 Sum_probs=195.8
Q ss_pred eccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCCh
Q 005864 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSL 488 (673)
Q Consensus 410 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 488 (673)
||+|+||+||+|... +|+.||+|.+.............+..|+++++.++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999654 6899999998764433333455677899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCceecc
Q 005864 489 AEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA 568 (673)
Q Consensus 489 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 568 (673)
.+++..... ..+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++++|||.+...... .......
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~-~~~~~~~ 155 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG-KKIKGRA 155 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccC-Ccccccc
Confidence 999976543 4588999999999999999999999 9999999999999999999999999998765432 2223345
Q ss_pred cccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHH
Q 005864 569 GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILE 648 (673)
Q Consensus 569 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 648 (673)
++..|+|||++.+..++.++||||+|+++|+|++|+.||......... ............. .....+..+.+
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~~~~----~~~~~~~~~~~ 227 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEK----EELKRRTLEMAVE----YPDKFSPEAKD 227 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccH----HHHHhcccccccc----CCccCCHHHHH
Confidence 778999999998888999999999999999999999998643321110 0000111111111 11223456889
Q ss_pred HHHHcccCCCCCCC-----CHHHHHH
Q 005864 649 VALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 649 li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
++.+||+.||++|| ++.++++
T Consensus 228 li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 228 LCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HHHHHccCChhHccCCCcccHHHHHh
Confidence 99999999999999 6666654
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=308.25 Aligned_cols=194 Identities=20% Similarity=0.354 Sum_probs=159.3
Q ss_pred cceeccCCcEEEEEEEeC---CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--CCeeeEEEe
Q 005864 407 EQCIGIGGQASVYRGELP---SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH--PRHSFLVYE 481 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e 481 (673)
...||+|+||+||+|+.. +++.||+|.+.... ....+.+|++++++++||||+++++++.. +...++|+|
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-----ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFD 80 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-----CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEe
Confidence 357999999999999764 45789999886432 13457789999999999999999999853 557789999
Q ss_pred cccCCChHHHHhcCC------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe----CCCCceEEecc
Q 005864 482 CLERGSLAEILSNDG------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL----SSEYEARVSDF 551 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Df 551 (673)
|+++ +|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 81 YAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 9875 8888775321 123578899999999999999999999 99999999999999 45678999999
Q ss_pred cceeecCCCCC---Cceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcc
Q 005864 552 GIAKFLKPGSS---NWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDF 609 (673)
Q Consensus 552 g~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~ 609 (673)
|+++....... ......+|+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 99987644322 2234568899999999876 4578999999999999999999999863
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=313.37 Aligned_cols=191 Identities=19% Similarity=0.307 Sum_probs=164.4
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
..+|++.+.||+|+||.||+|... +++.||+|..... ....|+.++++++||||+++++++..+...++|
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence 457999999999999999999775 5788999974332 234689999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
+||+. ++|.+++.... ..+++..+..|+.||+.||.|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 136 ~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 209 (357)
T PHA03209 136 LPHYS-SDLYTYLTKRS--RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV 209 (357)
T ss_pred EEccC-CcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCcccccccc
Confidence 99996 58998887643 4589999999999999999999999 999999999999999999999999999975332
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCC
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPR 607 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~ 607 (673)
. .......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 210 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 210 A-PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred C-cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 2 2223456899999999999999999999999999999999865553
|
|
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-36 Score=302.53 Aligned_cols=248 Identities=25% Similarity=0.383 Sum_probs=199.3
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.|...+.||+|++|.||+|.. .+++.|++|++... .....+.+.+|+.+++.++||||+++++++..++..++|+|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR---KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc---chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 355567899999999999976 47889999987543 22234568899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++... .+++..+..++.|++.|++|||+. +++||||+|+||+++.++.++++|||.+.......
T Consensus 97 ~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~ 169 (285)
T cd06648 97 FLEGGALTDIVTHT----RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV 169 (285)
T ss_pred ccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCC
Confidence 99999999998762 378899999999999999999999 99999999999999999999999999887654333
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.......+++.|+|||...+..++.++||||||+++|||++|+.||.......... .......+... ....
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~-----~~~~~~~~~~~----~~~~ 240 (285)
T cd06648 170 PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMK-----RIRDNLPPKLK----NLHK 240 (285)
T ss_pred cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHH-----HHHhcCCCCCc----cccc
Confidence 33344568899999999988889999999999999999999999986432211100 00000011111 1112
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+..+.+++.+||+.+|++||++.++++
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 241 VSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 3456899999999999999999999985
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-36 Score=299.53 Aligned_cols=250 Identities=23% Similarity=0.332 Sum_probs=197.2
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchh--hhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--Cee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLL--SEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 476 (673)
.+|++.+.||+|+||.||+|... +|+.||+|.+..... ......+.+.+|+.++++++||||+++++++.++ ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46888999999999999999764 589999998753221 1223456788999999999999999999998763 467
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++++||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 89999999999999997653 367888899999999999999999 999999999999999999999999999976
Q ss_pred cCCCC---CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccccc-CCCC
Q 005864 557 LKPGS---SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEIL-DPRL 632 (673)
Q Consensus 557 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~ 632 (673)
..... .......++..|+|||.+.+..++.++||||||+++|||++|+.||........ ..+.. .+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--------~~~~~~~~~~ 227 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAA--------IFKIATQPTN 227 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHH--------HHHHhcCCCC
Confidence 53211 112334578899999999888899999999999999999999999864321111 01111 1111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+ .........+.+++.+|+. +|++||+++|+++
T Consensus 228 ~---~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 228 P---VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred C---CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 1 1122344567889999995 9999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-36 Score=299.19 Aligned_cols=254 Identities=26% Similarity=0.404 Sum_probs=201.8
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhh---hhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLS---EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
+|+..+.||+|++|.||+|.. .+++.||+|.+...... .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999965 57899999988643321 12245788999999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-ceEEecccceeec
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-EARVSDFGIAKFL 557 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~ 557 (673)
|+||+++++|.+++... ..+++..+..++.|++.|++|||+. +++|+||+|+||+++.++ .++|+|||.+...
T Consensus 81 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY---GAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 99999999999999764 3578899999999999999999999 999999999999998775 5999999999876
Q ss_pred CCCCC----CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 558 KPGSS----NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 558 ~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
..... ......++..|+|||.+.+..++.++||||+|+++|+|++|..||........ .....+......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~- 228 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH-----LALIFKIASATT- 228 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch-----HHHHHHHhccCC-
Confidence 43311 11234678899999999888899999999999999999999999863321110 000111100011
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........+.++.+++.+|+..+|.+||++.++++
T Consensus 229 -~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 229 -APSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred -CCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 11122334567889999999999999999999975
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=306.02 Aligned_cols=258 Identities=21% Similarity=0.268 Sum_probs=199.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--CeeeE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHSFL 478 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 478 (673)
++|+..+.||+|+||.||+|..+ +++.+|+|.++..... ......+.+|+.++.+++||||+++++++..+ +..++
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK-EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc-ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 46888899999999999999775 6889999998754322 22344677899999999999999999999877 88999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|+||+++ +|.+++.... ..+++..+..++.|++.||+|||+. +++|+||+|+||+++.++.++|+|||++....
T Consensus 84 v~e~~~~-~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 84 VMEYVEH-DLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred EehhcCc-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 9999985 9999987654 3589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCCceecccccccccccccccCC-cCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cc---------
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MN--------- 621 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~--------- 621 (673)
..........+++.|+|||.+.+.. ++.++|+||+|+++|||++|+.||............ ..
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 158 SPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred CCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhcc
Confidence 4433334456788999999887544 688999999999999999999998643221100000 00
Q ss_pred -----cccccccCCCCCCCCcchHH--HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 622 -----LSLNEILDPRLPLPSRNIQD--KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 622 -----~~~~~~~~~~~~~~~~~~~~--~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..........+. ...+. ....+.+++.+||+.+|++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 238 PGAKKKTFTKYPYNQLR---KKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred chhcccccccccchhhh---ccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000000000 00111 2456889999999999999999999985
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=304.70 Aligned_cols=260 Identities=22% Similarity=0.280 Sum_probs=198.3
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|++.+.||.|++|.||+|... +|+.||+|++...... ....+.+.+|+++++.++|||++++++++.+++..+++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED-EGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc-ccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 567889999999999999764 7999999998654222 22345688899999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
++ ++|.+++..... ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.++|+|||.+........
T Consensus 80 ~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 80 LD-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred cC-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 95 699999876542 3589999999999999999999999 999999999999999999999999999976543333
Q ss_pred CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-------cccc------cccc--
Q 005864 563 NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-------NMNL------SLNE-- 626 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-------~~~~------~~~~-- 626 (673)
......++..|+|||++.+. .++.++||||||+++|||++|+.||........... .... ...+
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYK 234 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhh
Confidence 33334568899999987654 468899999999999999999999864322110000 0000 0000
Q ss_pred --ccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 627 --ILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 627 --~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
................+..+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 235 PTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000000000111123356889999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=305.11 Aligned_cols=261 Identities=23% Similarity=0.330 Sum_probs=198.0
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||.|++|.||+|... +|+.||||++...... ......+.+|++++++++||||+++++++.+++..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET-EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccc-cccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 4788899999999999999765 6899999988654322 2234578899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+. ++|.+++..... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++.+|++|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 80 FLH-QDLKKFMDASPL-SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred ccc-cCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 996 589998876432 4588999999999999999999999 99999999999999999999999999987664433
Q ss_pred CCceecccccccccccccccCC-cCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------ccc---cccccC-
Q 005864 562 SNWTEFAGTFGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-------NLS---LNEILD- 629 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-------~~~---~~~~~~- 629 (673)
.......++..|+|||.+.+.. ++.++||||||+++|||+||+.||......+...... ... ......
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDY 234 (284)
T ss_pred cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHH
Confidence 3334445688999999887644 5889999999999999999999986432211000000 000 000000
Q ss_pred -CCCCC-CC----cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 630 -PRLPL-PS----RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 630 -~~~~~-~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..++. .. ........++.+++.+||+.||++|||++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 235 KPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 00000 00 000112345789999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=300.05 Aligned_cols=251 Identities=23% Similarity=0.326 Sum_probs=202.3
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|...+.||+|+||.||+|... +|..||+|.+...... ....+.+.+|+++++.++|+||+++++++..++..++|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMP-VKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhcc-chhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 4778899999999999999765 5889999998653221 2235678899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-ceEEecccceeecCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-EARVSDFGIAKFLKPG 560 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~~~~ 560 (673)
|+++++|.+++..... ..+++..+..++.|+++|++|||+. +++|+||+|+||++++++ .++++|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 80 YCDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred cCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 9999999999976432 3578999999999999999999999 999999999999999885 4699999999876544
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........|++.|+|||+..+..++.++||||||+++|||++|+.||......+. ..+........ ...
T Consensus 156 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~~---~~~ 224 (257)
T cd08225 156 MELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQL--------VLKICQGYFAP---ISP 224 (257)
T ss_pred cccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH--------HHHHhcccCCC---CCC
Confidence 3333445688899999999888899999999999999999999999864322111 11111111111 011
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.++.+++.+||..+|++|||+.|+++
T Consensus 225 ~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 225 NFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred CCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 22345889999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=312.50 Aligned_cols=247 Identities=21% Similarity=0.346 Sum_probs=195.3
Q ss_pred ccceeccCCcEEEEEEEe-CCCCEEEEEeecc-chhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe--eeEEEe
Q 005864 406 AEQCIGIGGQASVYRGEL-PSGEVVAVKKFHS-LLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH--SFLVYE 481 (673)
Q Consensus 406 ~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~-~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--~~lv~e 481 (673)
...+||+|+|-+||+|.+ .+|..||=-.++. .....+...++|..|+.+|+.|+|||||+++.+|.+... ..+|+|
T Consensus 44 ~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTE 123 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITE 123 (632)
T ss_pred hhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeee
Confidence 446799999999999955 4687777322211 112334456899999999999999999999999987654 778999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-CceEEecccceeecCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFGIAKFLKPG 560 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~~~~~~~ 560 (673)
.|..|+|..|.++.+ ..+......|++||++||.|||++ .|+|+|||||-.|||++.+ |.|||+|.|+|..+...
T Consensus 124 L~TSGtLr~Y~kk~~---~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 124 LFTSGTLREYRKKHR---RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred cccCCcHHHHHHHhc---cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 999999999999875 477789999999999999999997 4699999999999999875 89999999999987543
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
......|||.|||||... ..|++.+||||||..++||+|+..||.-.... .....++..+..|.. ...
T Consensus 200 --~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~-------AQIYKKV~SGiKP~s--l~k 267 (632)
T KOG0584|consen 200 --HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP-------AQIYKKVTSGIKPAA--LSK 267 (632)
T ss_pred --ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH-------HHHHHHHHcCCCHHH--hhc
Confidence 344589999999999866 78999999999999999999999998732221 122222332222211 111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
-..+++.++|.+|+.. .++|||+.|+++
T Consensus 268 V~dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 268 VKDPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred cCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 1234689999999999 889999999985
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=352.76 Aligned_cols=317 Identities=38% Similarity=0.569 Sum_probs=282.5
Q ss_pred CCCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccc
Q 005864 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI 80 (673)
Q Consensus 1 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~ 80 (673)
.|++++.+|..++++++|++|+|++|.+++..|..+.++++|++|+|++|.+.+..|..+..+++|+.|++++|.+.+..
T Consensus 245 ~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~ 324 (968)
T PLN00113 245 YNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKI 324 (968)
T ss_pred CceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred ccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCC
Q 005864 81 SEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLK 160 (673)
Q Consensus 81 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~ 160 (673)
+..+..+++|+.|+|++|.+.+..+..++.+++|+.|++++|++++..|..+..+++|+.|++++|.+.+..|..+..++
T Consensus 325 ~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~ 404 (968)
T PLN00113 325 PVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACR 404 (968)
T ss_pred ChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCC
Confidence 99999999999999999999988899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccc-----------------------cccEEEccC
Q 005864 161 SLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLL-----------------------KVHYLNLSN 217 (673)
Q Consensus 161 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~-----------------------~L~~L~l~~ 217 (673)
+|+.|++++|.+++..|..+..+++|+.|++++|.+++.++..+..++ +|+.|++++
T Consensus 405 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~ 484 (968)
T PLN00113 405 SLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSR 484 (968)
T ss_pred CCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcC
Confidence 999999999999988888888888888888888888766665444433 456666677
Q ss_pred CcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCC
Q 005864 218 NQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIP 297 (673)
Q Consensus 218 n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~ 297 (673)
|++++..|..+..+++|+.|+|++|.+.+.+|..+..+++|+.|+|++|.+++.+|..|..+++|+.|+|++|++++.+|
T Consensus 485 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 564 (968)
T PLN00113 485 NQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIP 564 (968)
T ss_pred CccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCC
Confidence 77777778888888999999999999998999999999999999999999999999999999999999999999999888
Q ss_pred CCc-ccccCccccccCCcCCC
Q 005864 298 NST-GFQYDPIQALRGNRGLC 317 (673)
Q Consensus 298 ~~~-~~~~~~~~~~~~n~~~c 317 (673)
... .........+.+|+..+
T Consensus 565 ~~l~~l~~L~~l~ls~N~l~~ 585 (968)
T PLN00113 565 KNLGNVESLVQVNISHNHLHG 585 (968)
T ss_pred hhHhcCcccCEEeccCCccee
Confidence 743 33445556667776554
|
|
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-36 Score=301.42 Aligned_cols=260 Identities=24% Similarity=0.357 Sum_probs=200.8
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|++.+.||+|+||.||+|... +|+.||+|++...... ......+.+|+.++++++|||++++++++..+...++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE-GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc-chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 4788899999999999999764 6899999998764322 2335678899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+ +++|.+++.... ..+++.++..++.|+++||+|||+. +++|+||+|+||++++++.++++|||.+.......
T Consensus 80 ~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 80 YM-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred cc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 99 999999987654 4589999999999999999999999 99999999999999999999999999998765433
Q ss_pred C-CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccc---------
Q 005864 562 S-NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLS--------- 623 (673)
Q Consensus 562 ~-~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~--------- 623 (673)
. ......++..|+|||.+.+. .++.++||||+|+++|||++|..||............ ....
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07832 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPD 233 (286)
T ss_pred CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcch
Confidence 2 23345688899999988654 4688999999999999999998887532211100000 0000
Q ss_pred cccccCCCC-CCC-CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 LNEILDPRL-PLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 ~~~~~~~~~-~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+..+.. ..+ .....+....+.+++.+|++.+|++|||++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 234 YNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred hhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 000000000 000 0001123467899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=297.68 Aligned_cols=254 Identities=25% Similarity=0.380 Sum_probs=197.1
Q ss_pred CCccceeccCCcEEEEEEEeC----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC-----
Q 005864 404 FDAEQCIGIGGQASVYRGELP----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR----- 474 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 474 (673)
|.+.+.||+|+||+||+|.+. +++.||||.+...... ....+++.+|+.++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFS-SSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCC-hHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 567789999999999999653 4688999998654322 234677889999999999999999999886532
Q ss_pred -eeeEEEecccCCChHHHHhcCC---CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEec
Q 005864 475 -HSFLVYECLERGSLAEILSNDG---SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSD 550 (673)
Q Consensus 475 -~~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 550 (673)
..++++||+++|+|.+++.... ....+++.....++.|++.|++|||+. +++||||||+||+++.++.+|++|
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~d 156 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVAD 156 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECc
Confidence 2478999999999998875321 223478889999999999999999999 999999999999999999999999
Q ss_pred ccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccc
Q 005864 551 FGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEI 627 (673)
Q Consensus 551 fg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~ 627 (673)
||.++....... ......+++.|++||......++.++||||||+++|||++ |+.||......+ ....+
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~--------~~~~~ 228 (273)
T cd05074 157 FGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSE--------IYNYL 228 (273)
T ss_pred ccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHH--------HHHHH
Confidence 999986643221 1122345678999999988889999999999999999999 888876332111 00011
Q ss_pred cCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 628 LDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 628 ~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
... ....+. ..+..+.+++.+||+.+|++||++.|+++.|++
T Consensus 229 ~~~~~~~~~~----~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~ 271 (273)
T cd05074 229 IKGNRLKQPP----DCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL 271 (273)
T ss_pred HcCCcCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 111 111111 233468999999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-36 Score=302.62 Aligned_cols=261 Identities=21% Similarity=0.319 Sum_probs=200.5
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||.|++|.||+|... +|+.||+|.++.... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE--EGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc--ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 4788999999999999999875 689999999875432 2234567789999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++ +|.+++........+++..+..++.|++.||+|||+. +++||||+|+||++++++.++++|||++.......
T Consensus 79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence 9985 8999887655445689999999999999999999999 99999999999999999999999999997654333
Q ss_pred CCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccccc-----ccc
Q 005864 562 SNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLSLN-----EIL 628 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~~~-----~~~ 628 (673)
.......++..|+|||.+.+. .++.++||||||+++|||++|+.||......+..... ....+. ...
T Consensus 155 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07836 155 NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEY 234 (284)
T ss_pred cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchh
Confidence 333344568899999987654 4688999999999999999999998744321110000 000000 000
Q ss_pred CCCCCCCC-----cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 629 DPRLPLPS-----RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 629 ~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+... ......+..+.+++.+|++.||.+||++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 235 KPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred cccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 01111000 001123456889999999999999999999975
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=305.55 Aligned_cols=249 Identities=24% Similarity=0.364 Sum_probs=211.9
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
...|.+...||+|.|++|..|++. +|..||+|.+.+....... .+.+.+|+++|..++|||||+++.+...+...|+|
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~-~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSK-RQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHH-HHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 356888999999999999999764 6999999999876555443 44588999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+.+|.+++++..++. ..+..+..++.|+.+|++|||++ .|||||||++||+++.+.++||+|||++..+..
T Consensus 134 ~eya~~ge~~~yl~~~gr---~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGR---MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDY 207 (596)
T ss_pred EEeccCchhHHHHHhccc---chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeecc
Confidence 999999999999998864 34477888999999999999999 999999999999999999999999999998874
Q ss_pred CCCCceecccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
........|++.|.|||.+.+..| ++++|+||+|+++|.|+.|..||++... .+.-...+..++..+..-
T Consensus 208 -~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l--------k~Lr~rvl~gk~rIp~~m 278 (596)
T KOG0586|consen 208 -GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL--------KELRPRVLRGKYRIPFYM 278 (596)
T ss_pred -cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc--------ccccchheeeeeccccee
Confidence 344566889999999999998876 5799999999999999999999995432 333344555566554332
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
. .+..+++.+++..+|.+|++++++++
T Consensus 279 s----~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 279 S----CDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred e----chhHHHHHHhhccCccccCCHHHhhh
Confidence 2 23678899999999999999999875
|
|
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-36 Score=304.55 Aligned_cols=261 Identities=26% Similarity=0.373 Sum_probs=201.3
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|... +++.||+|.++.... .....+.+.+|++++++++|+||+++++++..++..++|+
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 79 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED-DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF 79 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc-cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence 36888999999999999999775 588999998865322 2234577899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||++++.+..+.... ..+++.++..++.|++.|++|||+. +++|+||+|+||++++++.+||+|||++......
T Consensus 80 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 80 EYVERTLLELLEASP---GGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred ecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 999987777665543 3478899999999999999999999 9999999999999999999999999999876544
Q ss_pred CC-CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccc------ccccccccc-----
Q 005864 561 SS-NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS------NMNLSLNEI----- 627 (673)
Q Consensus 561 ~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~------~~~~~~~~~----- 627 (673)
.. ......++..|+|||++.+. .++.++||||||+++|||++|+.||......+.... .........
T Consensus 154 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07833 154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNP 233 (288)
T ss_pred ccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCc
Confidence 32 33345678899999999887 789999999999999999999999864321110000 000000000
Q ss_pred -cCC-CCCCCC-------cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 628 -LDP-RLPLPS-------RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 628 -~~~-~~~~~~-------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
... .++... ......+.++.+++.+||+.+|++||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000 000000 001112567999999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-37 Score=286.05 Aligned_cols=243 Identities=23% Similarity=0.262 Sum_probs=210.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|+..+++|+|.||+|...+.+ +|+.||+|++++......++......|-.+|+..+||.+..+.-.|+..+..|.||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 57889999999999999999765 69999999999988777788888999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||..||.|.-++.+. ..+++.....+-..|..||.|||++ +||.||+|.+|.++|.||.+||.|||+++---..
T Consensus 248 eyanGGeLf~HLsre---r~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~ 321 (516)
T KOG0690|consen 248 EYANGGELFFHLSRE---RVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY 321 (516)
T ss_pred EEccCceEeeehhhh---hcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhcccc
Confidence 999999999998765 4588888888999999999999999 9999999999999999999999999999854444
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
....+.++|||.|.|||++....|+.++|.|.+||++|||+.|+.||...+. +....-++-..+.+|...
T Consensus 322 g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh--------~kLFeLIl~ed~kFPr~l-- 391 (516)
T KOG0690|consen 322 GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH--------EKLFELILMEDLKFPRTL-- 391 (516)
T ss_pred cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch--------hHHHHHHHhhhccCCccC--
Confidence 5566778999999999999999999999999999999999999999974322 222333444455554433
Q ss_pred HHHHHHHHHHHHcccCCCCCCC
Q 005864 641 DKLISILEVALLCLEESPESRP 662 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rp 662 (673)
+.+...++...+.+||.+|.
T Consensus 392 --s~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 392 --SPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred --CHHHHHHHHHHhhcChHhhc
Confidence 33467788899999999995
|
|
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-36 Score=297.84 Aligned_cols=246 Identities=21% Similarity=0.255 Sum_probs=191.2
Q ss_pred ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHH-hccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 408 QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKAL-TEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.||+|+||.||+|... +|+.||+|.+.............+..|..++ ...+|||++++++++..++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56899999999999764 6899999998654332223334455555544 445899999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
++|.+++...+ .+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++++|||++..... ..
T Consensus 82 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~ 151 (260)
T cd05611 82 GDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NK 151 (260)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc----cc
Confidence 99999997653 478889999999999999999999 999999999999999999999999999875432 22
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...++..|+|||...+..++.++||||+|+++|||++|..||....... ............+.......+..
T Consensus 152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 223 (260)
T cd05611 152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA--------VFDNILSRRINWPEEVKEFCSPE 223 (260)
T ss_pred cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH--------HHHHHHhcccCCCCcccccCCHH
Confidence 3457889999999988888999999999999999999999986432211 11111111111111112234456
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHHHh
Q 005864 646 ILEVALLCLEESPESRPTMQTVCQLL 671 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~~v~~~L 671 (673)
+.+++.+||+.+|++||++.++.+.|
T Consensus 224 ~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 224 AVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred HHHHHHHHccCCHHHccCCCcHHHHH
Confidence 89999999999999999876555544
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=296.47 Aligned_cols=243 Identities=28% Similarity=0.377 Sum_probs=198.9
Q ss_pred eccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCCh
Q 005864 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSL 488 (673)
Q Consensus 410 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 488 (673)
||.|++|.||+|... +++.||+|.+...........+.+.+|+.+++.++||||+++++++.+++..++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999775 4899999998765444444567899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCceecc
Q 005864 489 AEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA 568 (673)
Q Consensus 489 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 568 (673)
.+++.... .+++..+..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||.+....... ......
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~ 153 (262)
T cd05572 81 WTILRDRG---LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFC 153 (262)
T ss_pred HHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-cccccc
Confidence 99997653 478899999999999999999998 99999999999999999999999999998765432 223346
Q ss_pred cccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC--CCCCCCCcchHHHHHHH
Q 005864 569 GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD--PRLPLPSRNIQDKLISI 646 (673)
Q Consensus 569 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l 646 (673)
++..|+|||.+.+..++.++|+||+|+++|||++|..||..... ........+.. .....+.. .+.++
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~----~~~~~ 223 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE------DPMEIYNDILKGNGKLEFPNY----IDKAA 223 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC------CHHHHHHHHhccCCCCCCCcc----cCHHH
Confidence 78899999999888899999999999999999999999874321 01111122221 12222211 24568
Q ss_pred HHHHHHcccCCCCCCCC-----HHHHHH
Q 005864 647 LEVALLCLEESPESRPT-----MQTVCQ 669 (673)
Q Consensus 647 ~~li~~cl~~dp~~Rps-----~~~v~~ 669 (673)
.+++.+||+.+|++||+ ++|+++
T Consensus 224 ~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 224 KDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 99999999999999999 777765
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=298.25 Aligned_cols=248 Identities=25% Similarity=0.285 Sum_probs=207.9
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.+.|..-++||+|+||.||-.+.+ +|+.||.|++.+..............|-.++.++..+.||.+--+|.+.+..++|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 456888899999999999998654 6999999999877666666667788999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
+..|.||+|.-+|...+. ..+++..+..++.+|+.||.+||.. +||.||+||+|||+|+.|+++|+|.|+|..+..
T Consensus 264 LtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 999999999999988765 5699999999999999999999999 999999999999999999999999999998865
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC-CCCCCcc
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR-LPLPSRN 638 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 638 (673)
+.. ....+||.+|||||++.+..|+...|.||+||++|||+.|+.||.....-. -.+-+|.+ ...+..+
T Consensus 340 g~~-~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv---------k~eEvdrr~~~~~~ey 409 (591)
T KOG0986|consen 340 GKP-IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV---------KREEVDRRTLEDPEEY 409 (591)
T ss_pred CCc-cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh---------hHHHHHHHHhcchhhc
Confidence 443 345699999999999999999999999999999999999999986321111 11111111 1112223
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCC
Q 005864 639 IQDKLISILEVALLCLEESPESRP 662 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rp 662 (673)
....+.+..++....|.+||++|.
T Consensus 410 ~~kFS~eakslc~~LL~Kdp~~RL 433 (591)
T KOG0986|consen 410 SDKFSEEAKSLCEGLLTKDPEKRL 433 (591)
T ss_pred ccccCHHHHHHHHHHHccCHHHhc
Confidence 344556688889999999999986
|
|
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-36 Score=299.71 Aligned_cols=245 Identities=22% Similarity=0.244 Sum_probs=187.4
Q ss_pred eeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHh---ccCCCcccceeeeeecCCeeeEEEeccc
Q 005864 409 CIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALT---EIRHRNIVKFYGFCSHPRHSFLVYECLE 484 (673)
Q Consensus 409 ~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~---~l~h~niv~l~~~~~~~~~~~lv~e~~~ 484 (673)
.||+|+||.||+|... +|+.||+|.+.............+.+|..++. ..+|||++.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999764 68999999886543332222333444444333 3479999999999999999999999999
Q ss_pred CCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCc
Q 005864 485 RGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW 564 (673)
Q Consensus 485 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 564 (673)
+|+|.+++...+ .+++..+..++.|++.|++|||+. +++||||||+||++++++.++++|||++...... ..
T Consensus 81 ~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~--~~ 152 (279)
T cd05633 81 GGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KP 152 (279)
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceecccc--Cc
Confidence 999999987653 589999999999999999999999 9999999999999999999999999998755332 22
Q ss_pred eeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHH
Q 005864 565 TEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKL 643 (673)
Q Consensus 565 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (673)
....|+..|+|||...+ ..++.++||||+||++|||++|..||........ . ...... ...........+
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-----~-~~~~~~---~~~~~~~~~~~~ 223 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-----H-EIDRMT---LTVNVELPDSFS 223 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-----H-HHHHHh---hcCCcCCccccC
Confidence 33468999999998864 5688999999999999999999999863321100 0 000000 000111112334
Q ss_pred HHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 005864 644 ISILEVALLCLEESPESRP-----TMQTVCQL 670 (673)
Q Consensus 644 ~~l~~li~~cl~~dp~~Rp-----s~~~v~~~ 670 (673)
.++.+++.+||+.||++|| +++|+++.
T Consensus 224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 224 PELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 5688999999999999999 69998763
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=314.96 Aligned_cols=318 Identities=22% Similarity=0.223 Sum_probs=293.8
Q ss_pred CCCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccc
Q 005864 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI 80 (673)
Q Consensus 1 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~ 80 (673)
||+|+..-.+.++.++.|++||||.|.|+.+.-.+|..-.++++|+|++|.|+.....+|.++.+|.+|.|+.|+|+.++
T Consensus 134 ~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp 213 (873)
T KOG4194|consen 134 HNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLP 213 (873)
T ss_pred ccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccC
Confidence 68899999999999999999999999999777778888889999999999999988999999999999999999999999
Q ss_pred ccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCC
Q 005864 81 SEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLK 160 (673)
Q Consensus 81 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~ 160 (673)
...|.++++|+.|+|..|.|.-..+-.|.++++|+.|.|..|+|.....++|..+.++++|+|+.|++......++.+++
T Consensus 214 ~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt 293 (873)
T KOG4194|consen 214 QRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLT 293 (873)
T ss_pred HHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccc
Confidence 99999999999999999999977788999999999999999999988888999999999999999999988888899999
Q ss_pred CCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeec
Q 005864 161 SLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLS 240 (673)
Q Consensus 161 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls 240 (673)
+|+.|+|+.|.|..+.++.++..++|++|+|++|.++...+..|..+..|+.|+|+.|.++.+....|..+++|++|||+
T Consensus 294 ~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr 373 (873)
T KOG4194|consen 294 SLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLR 373 (873)
T ss_pred hhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCc
Confidence 99999999999999999999999999999999999998888999999999999999999998778889999999999999
Q ss_pred CCcCCCCCcc---cccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCcccccCccccccCCcCCC
Q 005864 241 HNFLGGEIPP---QICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLC 317 (673)
Q Consensus 241 ~N~l~~~~~~---~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c 317 (673)
+|.|+..+.+ .|.++++|+.|.|.+|+|..+.-.+|.+++.|++|||.+|.+...-|+++.........+....-+|
T Consensus 374 ~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflC 453 (873)
T KOG4194|consen 374 SNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLC 453 (873)
T ss_pred CCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccchhhhhhhcccceEE
Confidence 9999865543 5888999999999999999998899999999999999999999999988877666666666666666
Q ss_pred C
Q 005864 318 G 318 (673)
Q Consensus 318 ~ 318 (673)
+
T Consensus 454 D 454 (873)
T KOG4194|consen 454 D 454 (873)
T ss_pred e
Confidence 5
|
|
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-36 Score=298.76 Aligned_cols=246 Identities=24% Similarity=0.349 Sum_probs=198.8
Q ss_pred eccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCCh
Q 005864 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSL 488 (673)
Q Consensus 410 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 488 (673)
||+|+||.||++... +|+.|++|.+...........+.+.+|++++++++||||+++++.+..++..++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999876 4999999998765444445677899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC------
Q 005864 489 AEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS------ 562 (673)
Q Consensus 489 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~------ 562 (673)
.+++...+ .+++..+..++.|+++||+|||+. +++|+||+|+||++++++.++++|||++........
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 99998753 578999999999999999999999 999999999999999999999999999876533211
Q ss_pred --CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 563 --NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 563 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
......++..|+|||.......+.++||||||+++||+++|+.||...... .............+...
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~-- 224 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE--------EIFQNILNGKIEWPEDV-- 224 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHhcCCcCCCccc--
Confidence 223355788999999998888999999999999999999999998743211 11111111222222111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQLL 671 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L 671 (673)
..+..+.+++.+||+.+|++|||+.++.+.|
T Consensus 225 ~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 225 EVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred cCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 1245688999999999999999995555544
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=292.80 Aligned_cols=249 Identities=28% Similarity=0.444 Sum_probs=203.6
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.|+..+.||+|++|.||+|... +++.+++|++..... ...+.+.+|++.++.++|||++++++++..+...++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 3778899999999999999775 689999999876432 346788999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 78 FCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred cCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeeccccccccccc
Confidence 999999999997753 4589999999999999999999998 99999999999999999999999999998765443
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
. .....++..|+|||++.+..++.++||||||+++|+|++|+.||......+... .......+.... ...
T Consensus 153 ~-~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~----~~~ 222 (253)
T cd05122 153 A-RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF-----KIATNGPPGLRN----PEK 222 (253)
T ss_pred c-ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHH-----HHHhcCCCCcCc----ccc
Confidence 2 344567889999999988889999999999999999999999987432111100 000000111111 111
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+..+.+++.+||+.||++|||+.|+++
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 223 WSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 2456899999999999999999999975
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=299.47 Aligned_cols=252 Identities=23% Similarity=0.368 Sum_probs=193.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHH-HhccCCCcccceeeeeecCCeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKA-LTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
++|++.+.||+|+||.||+|... +|+.||+|++......+ ....+..|+.. ++..+||||+++++++..++..++|
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ--EQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH--HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 36888999999999999999775 69999999987543222 23445556664 5666899999999999999999999
Q ss_pred EecccCCChHHHHhcC-CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 480 YECLERGSLAEILSND-GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|||++ |+|.+++... .....+++..++.++.|++.||+|||+++ +++||||||+||+++.++.+||+|||++....
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGISGYLV 155 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence 99997 5888887653 22356899999999999999999999853 89999999999999999999999999998653
Q ss_pred CCCCCceeccccccccccccccc----CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC-CC
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYT----MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR-LP 633 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 633 (673)
... ......++..|+|||.+.+ ..++.++|+||+|+++|||++|+.||...... ........... ..
T Consensus 156 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~ 227 (283)
T cd06617 156 DSV-AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-------FQQLKQVVEEPSPQ 227 (283)
T ss_pred ccc-ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-------HHHHHHHHhcCCCC
Confidence 221 1233467889999998764 44688999999999999999999998632110 00111111111 11
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+. ...+.++.+++.+||..+|++||++.++++
T Consensus 228 ~~~---~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 228 LPA---EKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred CCc---cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111 123456899999999999999999999985
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=302.50 Aligned_cols=263 Identities=19% Similarity=0.248 Sum_probs=197.3
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCe----
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRH---- 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~---- 475 (673)
++|++.+.||+|+||.||+|... +|+.||+|.+...... ......+.+|+.+++.++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~-~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE-EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc-cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 36888999999999999999765 6899999987654222 223456888999999995 6999999999977655
Q ss_pred -eeEEEecccCCChHHHHhcCCC--CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-CCceEEecc
Q 005864 476 -SFLVYECLERGSLAEILSNDGS--IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-EYEARVSDF 551 (673)
Q Consensus 476 -~~lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Df 551 (673)
.++||||+++ +|.+++..... ...+++..+..++.||+.||.|||+. +++||||+|+||+++. ++.+||+||
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeec
Confidence 7999999986 89888865432 24689999999999999999999999 9999999999999998 889999999
Q ss_pred cceeecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccc
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLS 623 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~ 623 (673)
|++..............+++.|+|||++.+ ..++.++||||||+++|||++|..||............ ....
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (295)
T cd07837 156 GLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQV 235 (295)
T ss_pred ccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 999866443333334456888999998865 45789999999999999999999998643222110000 0000
Q ss_pred ccccc-------CCCCC--CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 LNEIL-------DPRLP--LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 ~~~~~-------~~~~~--~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.... .+... .........+.++.+++.+||++||.+||+++|++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 236 WPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred CcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000 00000 000011123456889999999999999999999975
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=300.48 Aligned_cols=244 Identities=25% Similarity=0.371 Sum_probs=196.9
Q ss_pred cceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 407 EQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
...||+|+||.||+|.. .+|+.||+|++.... ......+.+|+.+++.++|+|++++++++..++..++||||+++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 101 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK---QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 101 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc---hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCC
Confidence 35799999999999976 478999999875432 23456788999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
++|.+++... .+++..+..++.|++.|++|||+. +++||||+|+||++++++.++++|||++...........
T Consensus 102 ~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~ 174 (292)
T cd06657 102 GALTDIVTHT----RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK 174 (292)
T ss_pred CcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccccccccc
Confidence 9999987643 378899999999999999999999 999999999999999999999999999876644333334
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHH
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLIS 645 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (673)
...++..|+|||++.+..++.++|+||+|+++|||++|..||......+.. ............. ....+..
T Consensus 175 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~-----~~~~~~~~~~~~~----~~~~~~~ 245 (292)
T cd06657 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-----KMIRDNLPPKLKN----LHKVSPS 245 (292)
T ss_pred ccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-----HHHHhhCCcccCC----cccCCHH
Confidence 456889999999998888899999999999999999999998643221110 0011111111111 1123445
Q ss_pred HHHHHHHcccCCCCCCCCHHHHHH
Q 005864 646 ILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 646 l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.+++.+||..+|.+||++.++++
T Consensus 246 l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 246 LKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHHHHHHhCCcccCcCHHHHhc
Confidence 889999999999999999999986
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=301.39 Aligned_cols=248 Identities=26% Similarity=0.390 Sum_probs=197.7
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.|+..+.||+|+||.||+|... +|..||+|.+.............+..|++++++++|||++++++++..++..++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 3677889999999999999764 689999999865433333445678899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++ ++.+.+.... ..+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||++......
T Consensus 106 ~~~g-~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~- 178 (317)
T cd06635 106 YCLG-SASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA- 178 (317)
T ss_pred CCCC-CHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc-
Confidence 9975 8888776543 4588999999999999999999999 9999999999999999999999999998754322
Q ss_pred CCceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 562 SNWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
....+++.|+|||++. .+.++.++|||||||++|||++|+.||....... ....+.....+.. .
T Consensus 179 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--------~~~~~~~~~~~~~--~ 245 (317)
T cd06635 179 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--------ALYHIAQNESPTL--Q 245 (317)
T ss_pred ---ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH--------HHHHHHhccCCCC--C
Confidence 2345788999999974 4568899999999999999999999986322111 0111111111111 1
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
....+..+.+++.+||+.+|.+||++.++++.
T Consensus 246 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 277 (317)
T cd06635 246 SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKH 277 (317)
T ss_pred CccccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence 11234468899999999999999999999874
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=303.19 Aligned_cols=262 Identities=26% Similarity=0.305 Sum_probs=197.8
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--Ceee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHSF 477 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 477 (673)
.++|++.+.||+|+||.||+|... +|+.||+|.++...... .....+.+|+.++++++|+|++++++++... +..+
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 357899999999999999999764 69999999986542221 1233466799999999999999999998754 5689
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++ +|.+++.... ..+++.++..++.|+++|++|||+. +++||||+|+||+++.++.+||+|||++...
T Consensus 85 lv~e~~~~-~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 85 LVMEYCEQ-DLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEEecCCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 99999975 8988887643 4589999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------cccccccc-
Q 005864 558 KPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-------NLSLNEIL- 628 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-------~~~~~~~~- 628 (673)
...........++..|+|||.+.+ ..++.++||||+|+++|||++|+.||......+...... ...+....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07845 159 GLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSD 238 (309)
T ss_pred CCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhc
Confidence 544333334456788999998865 457899999999999999999999986433221100000 00000000
Q ss_pred ---CCCCCC---CCcc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 629 ---DPRLPL---PSRN----IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 629 ---~~~~~~---~~~~----~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...... +... ....+.++.+++.+|++.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 239 LPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred ccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000000 0000 1112456789999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=305.77 Aligned_cols=263 Identities=20% Similarity=0.296 Sum_probs=196.5
Q ss_pred CCCccceeccCCcEEEEEEEeC---CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--Ceee
Q 005864 403 NFDAEQCIGIGGQASVYRGELP---SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHSF 477 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 477 (673)
+|++.+.||+|+||.||+|... +++.||+|.+...........+.+.+|+.++..++||||+++++++... +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999764 4789999998764322223346678899999999999999999999887 7899
Q ss_pred EEEecccCCChHHHHhcCCC--CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC----CCceEEecc
Q 005864 478 LVYECLERGSLAEILSNDGS--IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS----EYEARVSDF 551 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~----~~~~kl~Df 551 (673)
+||||+++ ++.+++..... ...+++..+..++.|++.|++|||+. +++||||||+||+++. ++.+|++||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999986 77777754321 23588899999999999999999999 9999999999999999 899999999
Q ss_pred cceeecCCCCC---CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-ccccc---
Q 005864 552 GIAKFLKPGSS---NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-NMNLS--- 623 (673)
Q Consensus 552 g~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~--- 623 (673)
|++........ ......++..|+|||.+.+. .++.++||||||+++|||++|+.||........... .....
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99987643322 12334678899999987664 578999999999999999999999864322110000 00000
Q ss_pred ---------------------cccc--cCCCCCCCCcchH-------HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 ---------------------LNEI--LDPRLPLPSRNIQ-------DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 ---------------------~~~~--~~~~~~~~~~~~~-------~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.... .......+..... .....+.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000 0000011100000 22346889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=291.30 Aligned_cols=251 Identities=27% Similarity=0.371 Sum_probs=205.5
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--CeeeEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHSFLV 479 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 479 (673)
+|...+.||+|++|.||+|... +++.|++|.+...... ....+.+.+|++.+++++||||+++++.+... +..++|
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 4677899999999999999776 7999999998765332 34567899999999999999999999999888 889999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
+||+++++|.+++.... .+++..+..++.|+++|++|||+. +++|+||+|+||+++.++.++|+|||.+.....
T Consensus 80 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 99999999999998653 689999999999999999999998 999999999999999999999999999987755
Q ss_pred CCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 560 GSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 560 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
... ......++..|+|||...+...+.++||||||+++|+|++|..||...... ............. ..
T Consensus 154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~--~~ 224 (260)
T cd06606 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNP-------MAALYKIGSSGEP--PE 224 (260)
T ss_pred ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch-------HHHHHhccccCCC--cC
Confidence 432 134456888999999998888999999999999999999999998744310 0011111110000 01
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+..+.+++.+|++.+|++||++.|+++
T Consensus 225 ~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 225 IPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 11122456999999999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=300.69 Aligned_cols=262 Identities=20% Similarity=0.278 Sum_probs=196.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|++|+||+|... +|+.||+|.+...... ....+.+.+|++++++++||||+++++++..+...++||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED-EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc-ccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 46888999999999999999765 6899999988654221 223467888999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-CCceEEecccceeecCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-EYEARVSDFGIAKFLKP 559 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~~~ 559 (673)
||+++ +|.+++..... ..+++..+..++.||+.||+|||+. +++|+||+|+||+++. ++.+||+|||++.....
T Consensus 81 e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 81 EYLDL-DLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred ecccc-cHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 99964 88888865432 3467888889999999999999999 9999999999999985 56799999999976544
Q ss_pred CCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccccc------
Q 005864 560 GSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLSLN------ 625 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~~~------ 625 (673)
.........+++.|+|||++.+ ..++.++||||+|+++|+|+||+.||......+..... ....+.
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (294)
T PLN00009 156 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLP 235 (294)
T ss_pred CccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccch
Confidence 3333334467889999998865 45788999999999999999999998643221110000 000000
Q ss_pred cc--cCCCCCCCC--cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 EI--LDPRLPLPS--RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ~~--~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.. ..+...... ......+.++.+++.+|++.+|++||++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 236 DYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 000000000 001122345889999999999999999999985
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=325.12 Aligned_cols=257 Identities=26% Similarity=0.409 Sum_probs=205.9
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC----C----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeee
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP----S----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFC 470 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~----~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 470 (673)
..++..+.+.+|+|.||.|++|... . ...||||.++..... .+.+.+..|+++|+.+ +||||+.++|+|
T Consensus 294 ~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~llG~~ 371 (609)
T KOG0200|consen 294 PRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNLLGAC 371 (609)
T ss_pred chhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhheeee
Confidence 3344566679999999999999542 1 457999998876433 5688999999999999 699999999999
Q ss_pred ecCCeeeEEEecccCCChHHHHhcCC-------C----C--ccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCC
Q 005864 471 SHPRHSFLVYECLERGSLAEILSNDG-------S----I--KEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKN 537 (673)
Q Consensus 471 ~~~~~~~lv~e~~~~gsL~~~l~~~~-------~----~--~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~N 537 (673)
.+.+..++|.||++.|+|.++++..+ . . ..++......++.|||.||+||++. +++||||.++|
T Consensus 372 t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRN 448 (609)
T KOG0200|consen 372 TQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARN 448 (609)
T ss_pred ccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhhhh
Confidence 99999999999999999999998765 0 0 2388899999999999999999999 99999999999
Q ss_pred eEeCCCCceEEecccceeecCCCCCCc-eecc--cccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccc
Q 005864 538 VLLSSEYEARVSDFGIAKFLKPGSSNW-TEFA--GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLL 613 (673)
Q Consensus 538 ill~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~--~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~ 613 (673)
|+++++..+||+|||+|+......... .... -+..|||||.+....|+.|+||||||+++|||++ |..||......
T Consensus 449 VLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~ 528 (609)
T KOG0200|consen 449 VLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT 528 (609)
T ss_pred EEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH
Confidence 999999999999999999654433222 2122 2457999999999999999999999999999998 88998742211
Q ss_pred cccccccccccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 614 SSSSSNMNLSLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 614 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.....-+.++ ++..|.. +..+++++++.||+.+|++||++.|+++.++
T Consensus 529 -------~~l~~~l~~G~r~~~P~~----c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~ 577 (609)
T KOG0200|consen 529 -------EELLEFLKEGNRMEQPEH----CSDEIYDLMKSCWNADPEDRPTFSECVEFFE 577 (609)
T ss_pred -------HHHHHHHhcCCCCCCCCC----CCHHHHHHHHHHhCCCcccCCCHHHHHHHHH
Confidence 1111111122 2233322 2446889999999999999999999999875
|
|
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=291.44 Aligned_cols=249 Identities=25% Similarity=0.446 Sum_probs=204.9
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|++.+.||+|++|.||+|... +++.|++|.+...... ....+.+.+|++++.+++|||++++++++..++..++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 4778899999999999999765 6889999998765332 2346789999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++... ..+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 80 YAENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred cCCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 99999999999765 3589999999999999999999999 99999999999999999999999999998876554
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.......++..|+|||...+..++.++||||+|+++|+|++|+.||.......... ... .......+ ..
T Consensus 154 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~-----~~~--~~~~~~~~----~~ 222 (254)
T cd06627 154 KDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALF-----RIV--QDDHPPLP----EG 222 (254)
T ss_pred ccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHH-----HHh--ccCCCCCC----CC
Confidence 43344568889999999988888999999999999999999999986432211100 000 01111111 12
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+..+.+++.+||..+|++|||+.+++.
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 223 ISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred CCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 2346889999999999999999999975
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=300.11 Aligned_cols=253 Identities=24% Similarity=0.325 Sum_probs=193.9
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeeeEEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 480 (673)
+|+..+.||+|+||.||++... +|+.||+|.+...... .....+.+|+.++.++. ||||+++++++..++..+++|
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 4556678999999999999764 6899999998654322 34667889999999996 999999999999999999999
Q ss_pred ecccCCChHHHHh---cCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 481 ECLERGSLAEILS---NDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 481 e~~~~gsL~~~l~---~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
||+.. ++.++.. ... ...+++..+..++.|++.||+|||+.. +++||||||+||+++.++.++|+|||++...
T Consensus 83 e~~~~-~l~~l~~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 158 (288)
T cd06616 83 ELMDI-SLDKFYKYVYEVL-KSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFGISGQL 158 (288)
T ss_pred ecccC-CHHHHHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecchhHHh
Confidence 99875 6555432 211 245889999999999999999999742 8999999999999999999999999999765
Q ss_pred CCCCCCceecccccccccccccccC---CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCC-C
Q 005864 558 KPGSSNWTEFAGTFGYVAPELAYTM---KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRL-P 633 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 633 (673)
..... .....++..|+|||++.+. .++.++||||+|+++|||++|+.||..... ......+...... .
T Consensus 159 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-------~~~~~~~~~~~~~~~ 230 (288)
T cd06616 159 VDSIA-KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS-------VFDQLTQVVKGDPPI 230 (288)
T ss_pred ccCCc-cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch-------HHHHHhhhcCCCCCc
Confidence 33221 2334578899999998766 688999999999999999999999864321 0011111111111 1
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.......+.++.+++.+||+.+|++|||++++++
T Consensus 231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 231 LSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred CCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111234567999999999999999999999986
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=297.14 Aligned_cols=250 Identities=24% Similarity=0.372 Sum_probs=204.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 479 (673)
++|.+.+.||+|+||.||+|... +|+.||+|.+...........+.+..|++++.+++ ||||+++++++..++..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36888999999999999999765 79999999987644333444677889999999998 99999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++++|.+++...+ .+++..+..++.|++.||.|||+. +++|+||+|+||+++.++.++++|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 81 LEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 99999999999998753 589999999999999999999999 999999999999999999999999999986643
Q ss_pred CCC--------------------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc
Q 005864 560 GSS--------------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN 619 (673)
Q Consensus 560 ~~~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~ 619 (673)
... ......++..|+|||...+..++.++||||+|++++++++|+.||.......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----- 229 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL----- 229 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH-----
Confidence 221 1123457889999999988889999999999999999999999987433111
Q ss_pred cccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCH----HHHHH
Q 005864 620 MNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTM----QTVCQ 669 (673)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~----~~v~~ 669 (673)
............+. ..+..+.+++.+||+.+|++||++ +|+++
T Consensus 230 ---~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 230 ---TFQKILKLEYSFPP----NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ---HHHHHHhcCCCCCC----ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 11112222222222 224458899999999999999999 77764
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-35 Score=290.13 Aligned_cols=252 Identities=26% Similarity=0.384 Sum_probs=205.7
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|++.+.||.|+||.||++... +++.|++|++..... .....+.+.+|+++++.++|||++++.+.+..++..++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM-SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC-ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 4778899999999999999765 689999999865432 23446778899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 482 CLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|+++++|.+++.... ....+++..+..++.+++.|++|||+. +++|+||+|+||++++++.++|+|||.+......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST 156 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccC
Confidence 999999999997642 125689999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........+++.|+|||...+..++.++||||+|+++++|++|+.||+.....+ ...............
T Consensus 157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~--- 225 (258)
T cd08215 157 VDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE--------LALKILKGQYPPIPS--- 225 (258)
T ss_pred cceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH--------HHHHHhcCCCCCCCC---
Confidence 333344568889999999988889999999999999999999999987432211 111111111111111
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+..+.+++.+||..+|++|||+.++++
T Consensus 226 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 226 QYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 22345889999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=280.28 Aligned_cols=204 Identities=20% Similarity=0.334 Sum_probs=171.0
Q ss_pred hcCCCccceeccCCcEEEEEEEeC---C--CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec-CC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP---S--GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH-PR 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~---~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~ 474 (673)
...|+....||+|.||.||+|.-+ + .+.+|+|+++...... .......+|+.+++.++|||++.+..++.. +.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~t-GiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGT-GISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCC-CcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 356889999999999999999432 2 2369999997653321 223456789999999999999999999876 78
Q ss_pred eeeEEEecccCCChHHHHhcCC--CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC----CceEE
Q 005864 475 HSFLVYECLERGSLAEILSNDG--SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE----YEARV 548 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~----~~~kl 548 (673)
..++++||.+. +|.++++.++ ....++-..+.+|+.||+.|+.|||++ .|+||||||.||++..+ |.|||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEe
Confidence 89999999998 9999997543 235688889999999999999999999 89999999999999888 89999
Q ss_pred ecccceeecCCCCCC---ceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcc
Q 005864 549 SDFGIAKFLKPGSSN---WTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDF 609 (673)
Q Consensus 549 ~Dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~ 609 (673)
+|||+++.+...-.. ...++.|++|+|||.+.+. .||++.||||.|||+.||+|-++-|.+
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 999999988654332 2456789999999998865 489999999999999999998887754
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-35 Score=296.38 Aligned_cols=259 Identities=20% Similarity=0.240 Sum_probs=185.4
Q ss_pred cCCCccceeccCCcEEEEEEEeCC----CCEEEEEeeccchhhhhHH--------HHHHHHHHHHHhccCCCcccceeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS----GEVVAVKKFHSLLLSEISV--------QREFLNEIKALTEIRHRNIVKFYGF 469 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~--------~~~~~~e~~~l~~l~h~niv~l~~~ 469 (673)
++|.+.+.||+|+||+||+|...+ +..+|+|............ ......+...+..++|+++++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 579999999999999999997654 4456666533221110000 1122334455667789999999998
Q ss_pred eecCC----eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc
Q 005864 470 CSHPR----HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE 545 (673)
Q Consensus 470 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 545 (673)
+.... ..++++|++.. ++.+.+.... ..++..+..++.|++.||+|||+. +++||||||+||+++.++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRIK---CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhhc---cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCc
Confidence 75443 34678887654 6766665432 356778889999999999999999 9999999999999999999
Q ss_pred eEEecccceeecCCCCC-------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc
Q 005864 546 ARVSDFGIAKFLKPGSS-------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS 618 (673)
Q Consensus 546 ~kl~Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~ 618 (673)
++|+|||+++....... ......||+.|+|||+..+..++.++|||||||++|||++|+.||...........
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 99999999987643221 11234689999999999999999999999999999999999999975422111000
Q ss_pred cc-ccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 619 NM-NLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 619 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.. ......+..+....+ ..+..+.+++..|+..+|++||+++++.+.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 245 AAKCDFIKRLHEGKIKIK-----NANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HhHHHHHHHhhhhhhccC-----CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 00 001111122222211 22356889999999999999999999999874
|
|
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=291.79 Aligned_cols=250 Identities=23% Similarity=0.283 Sum_probs=204.1
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|++.+.||+|+||.||++... +++.+|+|.+...... ......+.+|++++++++||||+++++++......++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS-QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc-HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 4778899999999999999654 6889999998754332 2345678889999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCC-CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 482 CLERGSLAEILSNDGS-IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|+++++|.+++..... ...+++..+..++.|++.|++|||+. +++|+||+|+||++++++.+|++|||++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence 9999999999876321 24578999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
......++..|+|||...+..++.++|+||+|+++|||++|+.||......+ ....+.....+.. ..
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~---~~ 223 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD--------LRYKVQRGKYPPI---PP 223 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHhcCCCCCC---ch
Confidence 2223457889999999999889999999999999999999999987432211 1111111222211 12
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.++.+++.+|++.+|++||++.|+++
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 224 IYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred hhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 34566999999999999999999999986
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-35 Score=290.73 Aligned_cols=250 Identities=21% Similarity=0.285 Sum_probs=194.1
Q ss_pred HHHHHHHhcCCCcccee--ccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeee
Q 005864 394 YEEIIRATKNFDAEQCI--GIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGF 469 (673)
Q Consensus 394 ~~~~~~~~~~~~~~~~i--g~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 469 (673)
..+.....+.|++.+.+ |+|+||.||++.. .+++.+|+|.+....... .|+.....+ +|||+++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~ 77 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYS 77 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEE
Confidence 44555566778887777 9999999999976 468899999876432111 122222222 79999999999
Q ss_pred eecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-ceEE
Q 005864 470 CSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-EARV 548 (673)
Q Consensus 470 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl 548 (673)
+..++..++||||+++|+|.+++.... .+++.++..++.|+++|+.|||+. +++||||+|+||+++.++ .++|
T Consensus 78 ~~~~~~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l 151 (267)
T PHA03390 78 VTTLKGHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYL 151 (267)
T ss_pred EecCCeeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEE
Confidence 999999999999999999999998653 589999999999999999999999 999999999999999988 9999
Q ss_pred ecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccccc
Q 005864 549 SDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEIL 628 (673)
Q Consensus 549 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 628 (673)
+|||++...... ....++..|+|||++.+..++.++||||+|+++|||++|+.||........ ....+....
T Consensus 152 ~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~ 223 (267)
T PHA03390 152 CDYGLCKIIGTP----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEEL----DLESLLKRQ 223 (267)
T ss_pred ecCccceecCCC----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchh----hHHHHHHhh
Confidence 999999865432 234578899999999988999999999999999999999999873221100 000111111
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 005864 629 DPRLPLPSRNIQDKLISILEVALLCLEESPESRPT-MQTVCQ 669 (673)
Q Consensus 629 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps-~~~v~~ 669 (673)
..... .....+..+.+++.+||+.+|.+||+ ++|+++
T Consensus 224 ~~~~~----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 224 QKKLP----FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred cccCC----cccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 11111 22244566899999999999999996 588874
|
|
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-37 Score=331.74 Aligned_cols=251 Identities=27% Similarity=0.384 Sum_probs=203.0
Q ss_pred hcCCCccceeccCCcEEEEEEE-eCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
+-++.....||.|.||.||.|. ..+|.-.|+|.++..... ....+...+|..++..++|||+|+++|+-.+.+..+|-
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 3456677889999999999995 457999999987654322 44567788999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
||||++|+|.+.+...+ ..++.....+..|++.|++|||++ |||||||||.||+++.+|.+|.+|||.|..+.+
T Consensus 1313 MEyC~~GsLa~ll~~gr---i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGR---IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred HHHhccCcHHHHHHhcc---hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecC
Confidence 99999999999998654 356677777889999999999999 999999999999999999999999999998866
Q ss_pred CCCC----ceecccccccccccccccCC---cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC-
Q 005864 560 GSSN----WTEFAGTFGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR- 631 (673)
Q Consensus 560 ~~~~----~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 631 (673)
..+. .....||+.|||||++.+.. ...+.||||+|||+.||+||+.||...+.. ...+-.+-.+.
T Consensus 1387 ~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-------~aIMy~V~~gh~ 1459 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-------WAIMYHVAAGHK 1459 (1509)
T ss_pred chhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-------hHHHhHHhccCC
Confidence 5422 23567999999999997544 566899999999999999999998733210 11111111112
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.| ...+.+-.+++..|+..||++|.++.|+++
T Consensus 1460 Pq~P----~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1460 PQIP----ERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred CCCc----hhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 2222 235667889999999999999999999876
|
|
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-35 Score=303.68 Aligned_cols=259 Identities=20% Similarity=0.317 Sum_probs=197.1
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-----
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP----- 473 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 473 (673)
..++|+..+.||+|+||.||+|... +|+.||+|.+..... .......+.+|+.++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ-NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc-ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 3478999999999999999999764 799999999865322 223345677899999999999999999998643
Q ss_pred -CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 474 -RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 474 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
...++||||+++ +|.+.+... +++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||
T Consensus 93 ~~~~~lv~e~~~~-~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 93 FQDVYLVMELMDA-NLCQVIQMD-----LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred cCcEEEEEeccCC-CHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCc
Confidence 346999999975 888887642 78888999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------------
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN------------- 619 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~------------- 619 (673)
+++...... ......++..|+|||.+.+..++.++||||+||++|+|++|+.||...+........
T Consensus 164 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (353)
T cd07850 164 LARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMS 242 (353)
T ss_pred cceeCCCCC-CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 998764332 223345788999999999999999999999999999999999998643211100000
Q ss_pred -cccccccccCCCC--------------CCCC---cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 620 -MNLSLNEILDPRL--------------PLPS---RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 620 -~~~~~~~~~~~~~--------------~~~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.........+.+. ..+. ......+..+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 243 RLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0000000000000 0000 001123456889999999999999999999985
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-35 Score=294.25 Aligned_cols=259 Identities=22% Similarity=0.306 Sum_probs=202.7
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|++.+.||+|++|.||+|... +|+.+++|.+...... ......+.+|++++++++||||+++++++..++..++|+||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES-EGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc-chhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 567789999999999999765 6899999998754332 23456788899999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++ ++.+++.... ..+++.++..++.|++.|+.|||+. +++|+||+|+||++++++.++|+|||.+........
T Consensus 80 ~~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~ 153 (283)
T cd05118 80 MDT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR 153 (283)
T ss_pred cCC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc
Confidence 986 8888887643 4689999999999999999999999 999999999999999999999999999987755442
Q ss_pred CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccccccccC-----
Q 005864 563 NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLSLNEILD----- 629 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~~~~~~~----- 629 (673)
......++..|+|||.+.+. .++.++|+||+|+++|+|++|+.||......+..... ....+....+
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNY 233 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhh
Confidence 33345678889999998776 7899999999999999999999998643322110000 0000000000
Q ss_pred ------CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 630 ------PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 630 ------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.............+.++.+++.+||+.||.+||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0000001112234567999999999999999999999985
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-35 Score=294.53 Aligned_cols=259 Identities=22% Similarity=0.315 Sum_probs=196.7
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc---CCCcccceeeeeecCCe----
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI---RHRNIVKFYGFCSHPRH---- 475 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~---- 475 (673)
|++.+.||+|+||.||+|... +++.||+|+++..... ......+.+|+.++.++ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE-EGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEecccccc-chhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 567889999999999999876 4899999998754332 22234566777777666 59999999999987766
Q ss_pred -eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 476 -SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 476 -~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
.+++|||+.+ +|.+++..... ..+++..+..++.|+++||+|||+. +++|+||+|+||++++++.++|+|||.+
T Consensus 80 ~~~l~~e~~~~-~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 80 KLTLVFEHVDQ-DLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eeEEEehhccc-CHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcc
Confidence 8999999985 89998876432 3589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------ccc-c--
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-------NLS-L-- 624 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-------~~~-~-- 624 (673)
........ .....++..|+|||++.+..++.++||||||+++|||++|+.||+.....+...... ... .
T Consensus 155 ~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07838 155 RIYSFEMA-LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRN 233 (287)
T ss_pred eeccCCcc-cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCC
Confidence 87643322 233457889999999998899999999999999999999999987433211100000 000 0
Q ss_pred ----ccccCCCC-CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 625 ----NEILDPRL-PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 625 ----~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........ .............+.+++.+||+.||++||+++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 234 VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00000000 0111122234567889999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=304.83 Aligned_cols=260 Identities=24% Similarity=0.368 Sum_probs=195.8
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-----C
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP-----R 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 474 (673)
.++|++.+.||+|+||.||+|.. .+|+.||+|.+... ........+.+|+.++++++||||+++++++... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPF--EHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccc--ccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 46799999999999999999965 46899999998642 2223456678899999999999999999987543 3
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++|+||+++ ++.+++... .+++..+..++.|+++||+|||+. +++||||||+||+++.++.++|+|||++
T Consensus 82 ~~~lv~e~~~~-~l~~~~~~~----~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~ 153 (336)
T cd07849 82 DVYIVQELMET-DLYKLIKTQ----HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLA 153 (336)
T ss_pred eEEEEehhccc-CHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccce
Confidence 57999999975 888887643 488899999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC---Cceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccc-------ccccccc
Q 005864 555 KFLKPGSS---NWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS-------SSNMNLS 623 (673)
Q Consensus 555 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-------~~~~~~~ 623 (673)
........ ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||......... .....+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~ 233 (336)
T cd07849 154 RIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQED 233 (336)
T ss_pred eeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 87643222 1223467889999998754 46889999999999999999999998643211100 0000000
Q ss_pred cccccCCC-------CCCC-Cc----chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 624 LNEILDPR-------LPLP-SR----NIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 624 ~~~~~~~~-------~~~~-~~----~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
...+.+.. .+.. .. .....+.++.+++.+||+.||++|||+.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11001000 0000 00 011234568899999999999999999999863
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-36 Score=306.05 Aligned_cols=261 Identities=26% Similarity=0.372 Sum_probs=201.8
Q ss_pred CCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC------Cee
Q 005864 404 FDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP------RHS 476 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~ 476 (673)
+...+.||+|+||.||+|+. .+|+.||||.+.... .....+...+|+++|++++|||||++.+.-.+. +..
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~--~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES--SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhc--ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 34457899999999999985 579999999987643 334567788999999999999999999986543 356
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeC--CCCc--eEEeccc
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS--SEYE--ARVSDFG 552 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~--~~~~--~kl~Dfg 552 (673)
.+|||||.+|||+..+.+......+++.+.+.++.+++.||.|||++ +|+||||||.||++- ++|+ -||+|||
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 89999999999999999887778899999999999999999999999 999999999999984 3343 6999999
Q ss_pred ceeecCCCCCCceecccccccccccccc-cCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-----------
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM----------- 620 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~----------- 620 (673)
.|+-.+.+. .....+||..|.+||... .+.|+..+|.|||||++|+.+||..||.............
T Consensus 170 ~Arel~d~s-~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v 248 (732)
T KOG4250|consen 170 AARELDDNS-LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGV 248 (732)
T ss_pred ccccCCCCC-eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCce
Confidence 999876544 667789999999999998 4889999999999999999999999997443322111110
Q ss_pred ------ccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCC--CHHHHHHH
Q 005864 621 ------NLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRP--TMQTVCQL 670 (673)
Q Consensus 621 ------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp--s~~~v~~~ 670 (673)
.+...-.....++.+....+.....+...+..++.-+|.+|- .+.++.+.
T Consensus 249 ~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~ 306 (732)
T KOG4250|consen 249 AIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAE 306 (732)
T ss_pred eEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHH
Confidence 000001111223333333344445566677778888888887 55444433
|
|
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-36 Score=272.19 Aligned_cols=249 Identities=20% Similarity=0.327 Sum_probs=197.1
Q ss_pred CccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEec
Q 005864 405 DAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 405 ~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
+...-+|.|..|.||+++.. +|..+|||.+... ...++.+++...+.++..- ++|+||+.+|||..+...++.||.
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt--~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel 172 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT--GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL 172 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeeccc--CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence 34566999999999999775 5999999999765 3444567788888887776 599999999999999999999998
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
|.. ....+++... .++++.-.-++...+..||.||.++. +|+|||+||+||++|+.|++|+||||.+.++-...
T Consensus 173 Ms~-C~ekLlkrik--~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk- 246 (391)
T KOG0983|consen 173 MST-CAEKLLKRIK--GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK- 246 (391)
T ss_pred HHH-HHHHHHHHhc--CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccc-
Confidence 865 6666666543 45788888889999999999999884 99999999999999999999999999998775432
Q ss_pred Cceeccccccccccccccc---CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 563 NWTEFAGTFGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
..+..+|-+.|||||.+.- ..|+-.+||||||+.++|+.||+.||..... ..+.+..+++...+.. ...
T Consensus 247 AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~t-------dFe~ltkvln~ePP~L-~~~ 318 (391)
T KOG0983|consen 247 AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKT-------DFEVLTKVLNEEPPLL-PGH 318 (391)
T ss_pred ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCc-------cHHHHHHHHhcCCCCC-Ccc
Confidence 2345677889999999863 3588899999999999999999999875322 1222333343222211 111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+..+.+++..||.+|+.+||...++++
T Consensus 319 ~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 319 MGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred cCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 225567999999999999999999999875
|
|
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-35 Score=295.93 Aligned_cols=259 Identities=24% Similarity=0.358 Sum_probs=198.7
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--CeeeEEE
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHSFLVY 480 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 480 (673)
|++.+.||+|+||.||+|... +|+.||+|++.... ......+.+.+|+++++.++|||++++++++... +..++|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN-EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc-ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 567889999999999999776 58999999997653 2233456788999999999999999999999887 8899999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++ +|.+++.... ..+++..+..++.|++.|++|||+. +++|+||+|+||++++++.++++|||++......
T Consensus 80 e~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 80 EYMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred ccccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 99985 8998887653 4689999999999999999999999 9999999999999999999999999999876543
Q ss_pred CC-Cceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-------cccccccc-----
Q 005864 561 SS-NWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-------NMNLSLNE----- 626 (673)
Q Consensus 561 ~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-------~~~~~~~~----- 626 (673)
.. ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||+.......... .....+..
T Consensus 154 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07840 154 NSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLP 233 (287)
T ss_pred CcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccch
Confidence 32 2233456788999997764 4578999999999999999999999864332110000 00000000
Q ss_pred ---ccCCCCCCCC---cchHH-HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 627 ---ILDPRLPLPS---RNIQD-KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 627 ---~~~~~~~~~~---~~~~~-~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........+. ..... .+.++.+++.+||..+|.+||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 234 WFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000000000 00011 1557899999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-35 Score=296.47 Aligned_cols=254 Identities=23% Similarity=0.334 Sum_probs=194.6
Q ss_pred hcCCCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 478 (673)
.++|++.+.||+|+||.||+|.+.+ ++.||||.++.... .....++..|+.++.+. +||||+++++++.++...++
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN--KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC--hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence 3568889999999999999998864 89999999875422 22345666777777777 49999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
||||+++ ++.++..... ..+++..+..++.|++.|++|||+.. +++||||+|+||++++++.+||+|||++....
T Consensus 92 v~e~~~~-~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 92 CMELMST-CLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFGISGRLV 166 (296)
T ss_pred EeeccCc-CHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence 9999864 7777776533 36889999999999999999999731 89999999999999999999999999987654
Q ss_pred CCCCCceecccccccccccccccCC----cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCC
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
.... .....++..|+|||.+.+.. ++.++||||||+++|||++|+.||...... ......++....+.
T Consensus 167 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-------~~~~~~~~~~~~~~ 238 (296)
T cd06618 167 DSKA-KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-------FEVLTKILQEEPPS 238 (296)
T ss_pred CCCc-ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-------HHHHHHHhcCCCCC
Confidence 3222 22345778999999987553 788999999999999999999998642110 01111111111111
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.. .....+.++.+++.+||+.||++||++.++++.
T Consensus 239 ~~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 239 LP-PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CC-CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 011234568999999999999999999999753
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=304.02 Aligned_cols=262 Identities=23% Similarity=0.329 Sum_probs=197.5
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecC--Ce
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHP--RH 475 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~--~~ 475 (673)
..++|++.+.||+|+||.||+|... +|+.||+|++..... .......+.+|+.++.++ +||||+++++++... ..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR-NATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC-cchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 3467888999999999999999765 688999998864322 222345677899999999 999999999998653 46
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccccee
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 555 (673)
.++||||+++ +|.+++... .+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+||+|||++.
T Consensus 84 ~~lv~e~~~~-~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 84 IYLVFEYMET-DLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred EEEEeccccc-CHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 7999999985 999988753 478889999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCC-----Cceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cc-
Q 005864 556 FLKPGSS-----NWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MN- 621 (673)
Q Consensus 556 ~~~~~~~-----~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~- 621 (673)
....... ......++..|+|||++.+ ..++.++||||||+++|||++|+.||......+..... ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE 235 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 6643321 2233567889999998764 45788999999999999999999998643221110000 00
Q ss_pred -------ccccccc----CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 622 -------LSLNEIL----DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 622 -------~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
......+ ..............+.++.+++.+||+.||++|||+.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 236 DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0000001 011110011111234568999999999999999999999863
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-35 Score=293.84 Aligned_cols=256 Identities=21% Similarity=0.270 Sum_probs=192.9
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecC--CeeeEE
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHP--RHSFLV 479 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~lv 479 (673)
|++.+.||+|+||.||+|... +++.||+|+++...... ......+|+..+.++. |||++++++++.++ +..++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~--~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL--EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc--hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 567889999999999999764 68999999987543221 2234457888999885 99999999999887 889999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
+||+++ ++.+++.... ..+++.++..++.|++.||+|||+. +++||||+|+||+++. +.+||+|||++.....
T Consensus 79 ~e~~~~-~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~ 151 (282)
T cd07831 79 FELMDM-NLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYS 151 (282)
T ss_pred EecCCc-cHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence 999975 8888887643 4589999999999999999999999 9999999999999999 9999999999987643
Q ss_pred CCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc------cccccccccC---
Q 005864 560 GSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN------MNLSLNEILD--- 629 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~------~~~~~~~~~~--- 629 (673)
... .....++..|+|||++.. ..++.++||||+||++|||++|..||......+..... ....+.+...
T Consensus 152 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07831 152 KPP-YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSR 230 (282)
T ss_pred CCC-cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccc
Confidence 322 233457889999997654 55788999999999999999999999643321100000 0000000000
Q ss_pred -CCCCCCCc-------chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 630 -PRLPLPSR-------NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 630 -~~~~~~~~-------~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+.. .....+.++.+++.+||+++|++||+++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 231 HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 00000000 01234567999999999999999999999986
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-35 Score=297.47 Aligned_cols=249 Identities=27% Similarity=0.401 Sum_probs=196.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+.|+..+.||+|+||.||+|... +++.||+|.+...........+++.+|+++++.++|+|++++++++..++..++|+
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34667788999999999999765 58889999886433333334567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+. |++.+++.... ..+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.++++|||++......
T Consensus 95 e~~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 95 EYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred EccC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 9997 58888776543 3578899999999999999999999 9999999999999999999999999998765432
Q ss_pred CCCceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 561 SSNWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
....+++.|+|||++. ...++.++|||||||++|||++|+.||........ .........+. .
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~--------~~~~~~~~~~~--~ 234 (308)
T cd06634 169 ----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--------LYHIAQNESPA--L 234 (308)
T ss_pred ----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH--------HHHHhhcCCCC--c
Confidence 2345788999999874 34678899999999999999999999763221110 00011111111 0
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.....+..+.+++.+||+.+|++||++.++++.
T Consensus 235 ~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 235 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred CcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 112334568899999999999999999999863
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-36 Score=275.48 Aligned_cols=251 Identities=22% Similarity=0.304 Sum_probs=208.6
Q ss_pred cCCCcc-ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeec----CC
Q 005864 402 KNFDAE-QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSH----PR 474 (673)
Q Consensus 402 ~~~~~~-~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~ 474 (673)
++|.+. ++||-|-.|.|.....+ +|+++|+|++... ....+|++..-.. .|||||.++++|.. ..
T Consensus 61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds--------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS--------PKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred hhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC--------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 445443 56999999999988554 7999999987532 3455788876666 69999999999854 34
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC---CCceEEecc
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS---EYEARVSDF 551 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Df 551 (673)
..++|||.|+||.|.+.++.++. ..+++.++..|+.||+.|+.|||+. +|.||||||+|+|.+. |..+|++||
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~-~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGD-QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred eeEeeeecccchHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccc
Confidence 67899999999999999998764 5699999999999999999999999 9999999999999964 456999999
Q ss_pred cceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
|+|+.-.. ........-|+.|.|||++...+|+...|+||+||++|-|+.|.+||...... .........+..+.
T Consensus 209 GFAK~t~~-~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~----aispgMk~rI~~gq 283 (400)
T KOG0604|consen 209 GFAKETQE-PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL----AISPGMKRRIRTGQ 283 (400)
T ss_pred ccccccCC-CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc----cCChhHHhHhhccC
Confidence 99986432 23345677899999999999999999999999999999999999999754332 11223344566777
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.+|...|...+....++|+.+|..+|++|-|+.|++.
T Consensus 284 y~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 284 YEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred ccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 88888999999999999999999999999999999875
|
|
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=297.35 Aligned_cols=258 Identities=19% Similarity=0.254 Sum_probs=192.8
Q ss_pred ccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 406 AEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 406 ~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
+.+.+|.|+++.||++.. +|+.||+|++..... .....+.+.+|++++++++||||+++++++..++..+++|||+++
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~-~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~ 83 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSC-SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAY 83 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEecccc-chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCC
Confidence 344455666666666655 799999999875422 233567899999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC---
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS--- 562 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 562 (673)
|+|.+++..... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++++|||.+........
T Consensus 84 ~~l~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 84 GSCEDLLKTHFP-EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred CCHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 999999986532 3478888999999999999999999 999999999999999999999999999876532221
Q ss_pred ----Cceeccccccccccccccc--CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccc-------------
Q 005864 563 ----NWTEFAGTFGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLS------------- 623 (673)
Q Consensus 563 ----~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~------------- 623 (673)
......++..|+|||++.. ..++.++|||||||++|||++|+.||................
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLY 239 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhh
Confidence 1123446778999999865 357889999999999999999999997432211000000000
Q ss_pred ---ccc----ccCCC--CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 ---LNE----ILDPR--LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 ---~~~----~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
... ..++. .............++.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 240 EDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred cCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 000 00000 00111122334457889999999999999999999986
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-35 Score=292.52 Aligned_cols=244 Identities=22% Similarity=0.226 Sum_probs=187.3
Q ss_pred eeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHH---HHHhccCCCcccceeeeeecCCeeeEEEeccc
Q 005864 409 CIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEI---KALTEIRHRNIVKFYGFCSHPRHSFLVYECLE 484 (673)
Q Consensus 409 ~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~---~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 484 (673)
.||+|+||.||+|... +|+.||+|.+.............+..|. ..++...||+|+++++++..++..++|+||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999764 6899999988654322222122233343 34445579999999999999999999999999
Q ss_pred CCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCc
Q 005864 485 RGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW 564 (673)
Q Consensus 485 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 564 (673)
+|+|.+++... ..+++..+..++.|++.|++|||+. +++||||||+||+++.++.++|+|||++....... .
T Consensus 81 g~~L~~~l~~~---~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--~ 152 (278)
T cd05606 81 GGDLHYHLSQH---GVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--P 152 (278)
T ss_pred CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC--C
Confidence 99999998754 3589999999999999999999999 99999999999999999999999999987553221 2
Q ss_pred eecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHH
Q 005864 565 TEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKL 643 (673)
Q Consensus 565 ~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (673)
....|+..|+|||.+.++ .++.++||||+|+++|||++|+.||........ ..............+. ..+
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~s 223 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-----HEIDRMTLTMAVELPD----SFS 223 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch-----HHHHHHhhccCCCCCC----cCC
Confidence 234688999999998754 588999999999999999999999874321110 0000011111111111 224
Q ss_pred HHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 644 ISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 644 ~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.++.+++.+|+..+|.+|| ++.++++
T Consensus 224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 224 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred HHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 5688999999999999999 9999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-35 Score=295.00 Aligned_cols=253 Identities=22% Similarity=0.291 Sum_probs=197.0
Q ss_pred CCCccceeccCCcEEEEEEEe----CCCCEEEEEeeccchhh-hhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCee
Q 005864 403 NFDAEQCIGIGGQASVYRGEL----PSGEVVAVKKFHSLLLS-EISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 476 (673)
+|++.+.||+|+||.||+|.. .+|+.||+|++...... .....+.+.+|+.++.++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999975 36899999998754322 223356788899999999 599999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++|+||+++++|.+++... ..+++..+..++.|++.||.|||+. +++||||+|+||++++++.+||+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQR---ERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 9999999999999999765 3477888999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC-CceecccccccccccccccC--CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 557 LKPGSS-NWTEFAGTFGYVAPELAYTM--KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 557 ~~~~~~-~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
...... ......++..|+|||.+.+. .++.++||||||+++|+|++|+.||....... ..............+
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~----~~~~~~~~~~~~~~~ 230 (290)
T cd05613 155 FHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN----SQAEISRRILKSEPP 230 (290)
T ss_pred cccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccc----cHHHHHHHhhccCCC
Confidence 643322 22345688899999998753 46789999999999999999999986321110 001111111111111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.+ ......+.+++.+||+.||++|| ++++++.
T Consensus 231 ~~----~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 231 YP----QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred CC----ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 11 12344688999999999999997 6677654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=295.50 Aligned_cols=246 Identities=26% Similarity=0.392 Sum_probs=194.7
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|...+.||+|+||+||+|... +|+.|++|++...........+.+.+|+++++.++|||++++++++.+++..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 556678999999999999764 6889999998754433444456788999999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+. |++.+++.... ..+++.++..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--- 173 (313)
T cd06633 103 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP--- 173 (313)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC---
Confidence 96 58888876543 4588999999999999999999999 999999999999999999999999999864322
Q ss_pred Cceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 563 NWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.....++..|+|||++. ...++.++||||||+++|||++|..||......... ........+. ...
T Consensus 174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~--------~~~~~~~~~~--~~~ 242 (313)
T cd06633 174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL--------YHIAQNDSPT--LQS 242 (313)
T ss_pred -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH--------HHHHhcCCCC--CCc
Confidence 23356788999999974 456888999999999999999999998643221110 0000001110 011
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+..+.+++.+||+.+|.+||++.++++
T Consensus 243 ~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 243 NEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 122345889999999999999999999985
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=288.95 Aligned_cols=251 Identities=22% Similarity=0.306 Sum_probs=197.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccch--hhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--Cee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLL--LSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 476 (673)
.+|++.+.||+|+||.||+|... +|+.||+|.+.... .........+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 46889999999999999999764 69999999875321 12233457889999999999999999999998654 467
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++++||+++++|.+++...+ .+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 89999999999999997643 377888999999999999999999 999999999999999999999999999986
Q ss_pred cCCCC---CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 557 LKPGS---SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 557 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
..... .......++..|+|||.+.+..++.++|+||||+++||+++|+.||........ ..+.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--------~~~~~~~~~~ 227 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAA--------IFKIATQPTK 227 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHH--------HHHHHcCCCC
Confidence 53211 112335678899999999888899999999999999999999999874322111 1111111100
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..........+.+++.+||. +|.+||++.+++.
T Consensus 228 --~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 228 --PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred --CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 11122344568899999999 5799999998875
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=316.11 Aligned_cols=266 Identities=16% Similarity=0.191 Sum_probs=186.6
Q ss_pred HhcCCCccceeccCCcEEEEEEEeCC--CCEEEEEe--------------eccchhhhhHHHHHHHHHHHHHhccCCCcc
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELPS--GEVVAVKK--------------FHSLLLSEISVQREFLNEIKALTEIRHRNI 463 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~~--~~~vavK~--------------~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 463 (673)
..++|++.+.||+|+||+||++..+. +..+++|. +.+...........+.+|+.++.+++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 34689999999999999999986532 22222221 111111122235668899999999999999
Q ss_pred cceeeeeecCCeeeEEEecccCCChHHHHhcCCC--CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeC
Q 005864 464 VKFYGFCSHPRHSFLVYECLERGSLAEILSNDGS--IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS 541 (673)
Q Consensus 464 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 541 (673)
|++++++..++..++|+|++.+ ++.+++..... ........+..++.|++.||+|||++ +|+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 9999999999999999999865 77777754321 12234566778999999999999999 999999999999999
Q ss_pred CCCceEEecccceeecCCCCCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCC-Cccccccc--ccc
Q 005864 542 SEYEARVSDFGIAKFLKPGSSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP-RDFISLLS--SSS 617 (673)
Q Consensus 542 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p-~~~~~~~~--~~~ 617 (673)
.++.+||+|||+++.+...... .....|+..|+|||++.+..++.++|||||||++|||++|..+ +....... ...
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~ 381 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL 381 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence 9999999999999876543322 2345789999999999999999999999999999999998754 32111000 000
Q ss_pred c------cccc-------ccccccCC-CCCCCCcchH------HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 618 S------NMNL-------SLNEILDP-RLPLPSRNIQ------DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 618 ~------~~~~-------~~~~~~~~-~~~~~~~~~~------~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
. .... ...+.++. .+........ ..+..+.+++.+|++.||++|||+.|+++
T Consensus 382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0 0000 00000000 0000000000 11234677899999999999999999986
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=285.87 Aligned_cols=241 Identities=27% Similarity=0.324 Sum_probs=199.5
Q ss_pred eccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCCh
Q 005864 410 IGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSL 488 (673)
Q Consensus 410 ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 488 (673)
||+|+||.||++... +++.||+|.+.............+..|++++++++||||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999765 5899999998776544444567899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCceecc
Q 005864 489 AEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA 568 (673)
Q Consensus 489 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 568 (673)
.+++.... .+++..+..++.|+++|+.|||+. +++|+||+|+||+++.++.++++|||++..............
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (250)
T cd05123 81 FSHLSKEG---RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFC 154 (250)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCc
Confidence 99998653 478899999999999999999998 999999999999999999999999999987654433344566
Q ss_pred cccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHH
Q 005864 569 GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILE 648 (673)
Q Consensus 569 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 648 (673)
++..|+|||...+...+.++|+||||+++||+++|+.||..... ......+.....+.+... +..+.+
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~----~~~l~~ 222 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--------KEIYEKILKDPLRFPEFL----SPEARD 222 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHhcCCCCCCCCC----CHHHHH
Confidence 78899999999888889999999999999999999999864321 111122222233333222 345889
Q ss_pred HHHHcccCCCCCCCCH---HHHH
Q 005864 649 VALLCLEESPESRPTM---QTVC 668 (673)
Q Consensus 649 li~~cl~~dp~~Rps~---~~v~ 668 (673)
++.+||..||++||++ +++.
T Consensus 223 ~i~~~l~~~p~~R~~~~~~~~l~ 245 (250)
T cd05123 223 LISGLLQKDPTKRLGSGGAEEIK 245 (250)
T ss_pred HHHHHhcCCHhhCCCcccHHHHH
Confidence 9999999999999999 5554
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=297.31 Aligned_cols=255 Identities=20% Similarity=0.283 Sum_probs=192.1
Q ss_pred ceeccC--CcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEeccc
Q 005864 408 QCIGIG--GQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLE 484 (673)
Q Consensus 408 ~~ig~G--~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 484 (673)
..||+| +||+||+|.+. +|+.||+|.+....... ...+.+.+|+.+++.++||||+++++++..++..++|+||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTE-EHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 346666 99999999764 79999999986543222 345788999999999999999999999999999999999999
Q ss_pred CCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCc
Q 005864 485 RGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW 564 (673)
Q Consensus 485 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 564 (673)
+|++.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||+.+..........
T Consensus 83 ~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 83 YGSANSLLKTYFP-EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred CCCHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 9999999986542 3478899999999999999999999 99999999999999999999999998654332211111
Q ss_pred -------eecccccccccccccccC--CcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccc-------------
Q 005864 565 -------TEFAGTFGYVAPELAYTM--KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNL------------- 622 (673)
Q Consensus 565 -------~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~------------- 622 (673)
....++..|+|||++.+. .++.++||||+||++|||++|+.||......+........
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch
Confidence 112345679999998763 4788999999999999999999998643211100000000
Q ss_pred c----------c-----c---------cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 623 S----------L-----N---------EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 623 ~----------~-----~---------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
. . . ........ ..........+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLR--TPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhhhhccchhhhhcccccchhcccccccccccccc--chhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 0 0 0 00000111 1112345567999999999999999999999985
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-35 Score=302.24 Aligned_cols=262 Identities=23% Similarity=0.306 Sum_probs=198.3
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-----C
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP-----R 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 474 (673)
.++|.+.+.||+|+||+||+|.. .+|+.||||.+...... ......+.+|+.+++.++||||+++++++... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDN-RIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccc-cchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 35789999999999999999966 46899999998754222 22345677899999999999999999988644 3
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++|+||+. ++|.+++... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSS---QTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 4799999996 6899988765 3588899999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccc-------ccccc----
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS-------SNMNL---- 622 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-------~~~~~---- 622 (673)
..............++..|+|||.+.. ..++.++|||||||++|+|++|+.||.......... .....
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07858 156 RTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGF 235 (337)
T ss_pred cccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 876543333344567889999998764 468899999999999999999999986432210000 00000
Q ss_pred ----ccccccC--CCCCCC--CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 623 ----SLNEILD--PRLPLP--SRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 623 ----~~~~~~~--~~~~~~--~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.....+. +..+.. .......+.++.+++.+||+.+|++|||++|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 236 IRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred cCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 0000000 000000 00112344568899999999999999999999863
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-35 Score=295.17 Aligned_cols=256 Identities=23% Similarity=0.300 Sum_probs=199.9
Q ss_pred CCCccceeccCCcEEEEEEEe----CCCCEEEEEeeccchhh-hhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCee
Q 005864 403 NFDAEQCIGIGGQASVYRGEL----PSGEVVAVKKFHSLLLS-EISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 476 (673)
+|++.+.||+|++|.||+|.. .+++.||||.++..... .....+.+..|++++.++ +||||+++++.+..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 377889999999999999964 35788999998754322 223456788999999999 599999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||+++|+|.+++... ..+++..+..++.|+++||.|||+. +++||||+|+||+++.++.++++|||++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR---EHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 9999999999999998754 3478889999999999999999998 999999999999999999999999999876
Q ss_pred cCCCCCC-ceecccccccccccccccCC--cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 557 LKPGSSN-WTEFAGTFGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 557 ~~~~~~~-~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
....... .....++..|+|||...+.. .+.++||||||+++|||++|..||........ .............+
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~----~~~~~~~~~~~~~~ 230 (288)
T cd05583 155 FLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNS----QSEISRRILKSKPP 230 (288)
T ss_pred cccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccch----HHHHHHHHHccCCC
Confidence 5433222 22345788999999987655 78899999999999999999999853211100 00111111111222
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+. .....+.+++.+||+.||++|||+.++.+.|+
T Consensus 231 ~~~----~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 231 FPK----TMSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred CCc----ccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 221 22345889999999999999999988877664
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-35 Score=300.78 Aligned_cols=259 Identities=22% Similarity=0.333 Sum_probs=201.2
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC-----ee
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR-----HS 476 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~ 476 (673)
+|++.+.||.|++|.||+|... +|+.||+|++..... .....+.+.+|+.+++.++||||+++++++.... ..
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD-DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc-cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 4788899999999999999775 589999999876432 2334577899999999999999999999998765 78
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||+++ +|.+++.... .+++..+..++.|++.||+|||+. +++||||||.||+++.++.++|+|||.+..
T Consensus 80 ~lv~e~~~~-~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 80 YIVTELMET-DLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEEecchhh-hHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 999999985 8999887653 688999999999999999999999 999999999999999999999999999997
Q ss_pred cCCCC---CCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-------cc-----
Q 005864 557 LKPGS---SNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-------NM----- 620 (673)
Q Consensus 557 ~~~~~---~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-------~~----- 620 (673)
..... .......++..|+|||.+.+. .++.++|+||+|+++|+|++|+.||......+.... ..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 232 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLK 232 (330)
T ss_pred ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhh
Confidence 75543 123445678899999999887 789999999999999999999999864332110000 00
Q ss_pred ---ccccccccCCCCCCCC----cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 ---NLSLNEILDPRLPLPS----RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 ---~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.......+........ ......+..+.+++.+||+.+|.+||+++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 0000000000000000 001123456889999999999999999999986
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-35 Score=296.37 Aligned_cols=264 Identities=25% Similarity=0.337 Sum_probs=198.2
Q ss_pred HHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC---
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR--- 474 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--- 474 (673)
+..++|++.+.||+|+||.||+|..+ +|+.||+|.++..... ......+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~ 82 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK-EGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDAL 82 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc-cCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhh
Confidence 45578999999999999999999775 5899999998654322 223456778999999999999999999987654
Q ss_pred -------eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceE
Q 005864 475 -------HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEAR 547 (673)
Q Consensus 475 -------~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 547 (673)
..++|+||+++ ++.+.+.... ..+++..+..++.|++.||+|||+. +|+|+||+|+||++++++.+|
T Consensus 83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 83 DFKKDKGAFYLVFEYMDH-DLMGLLESGL--VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred hccccCCcEEEEEcccCc-cHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEE
Confidence 78999999987 7777776542 4589999999999999999999999 999999999999999999999
Q ss_pred EecccceeecCCCCC-Cceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccc-------cc
Q 005864 548 VSDFGIAKFLKPGSS-NWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS-------SS 618 (673)
Q Consensus 548 l~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-------~~ 618 (673)
|+|||.+........ ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||......+.. ..
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~ 236 (302)
T cd07864 157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGS 236 (302)
T ss_pred eCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 999999987654332 2233456788999998764 35788999999999999999999998743221100 00
Q ss_pred ccccccccc--------cCCCCCCC---CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 619 NMNLSLNEI--------LDPRLPLP---SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 619 ~~~~~~~~~--------~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+..+ .++..... .......+..+.+++.+||+.||.+||++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 237 PCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred CChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000000000 00000000 0001112456899999999999999999999975
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-35 Score=289.77 Aligned_cols=252 Identities=21% Similarity=0.261 Sum_probs=198.0
Q ss_pred CCCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhh--hhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLS--EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
+|.+.+.||+|+||.||++.... +..+++|..+..... .......+..|+.+++.++||||+++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47888999999999999997643 455666665443221 122344577899999999999999999999998999999
Q ss_pred EecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 480 YECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
+||+++++|.+++.... ....+++..+..++.|++.|+.|||+. +++|+||+|+||++++ +.++++|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeecC
Confidence 99999999999986532 234689999999999999999999999 9999999999999985 569999999998765
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
..........+++.|+|||...+..++.++|+||||+++|+|++|..||....... ..........+. .
T Consensus 157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~--------~~~~~~~~~~~~---~ 225 (260)
T cd08222 157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLS--------VVLRIVEGPTPS---L 225 (260)
T ss_pred CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHH--------HHHHHHcCCCCC---C
Confidence 44443444567889999999988888999999999999999999999986322111 111111111111 1
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.++.+++.+||..+|++||++.|+++
T Consensus 226 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 226 PETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred cchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 2244567899999999999999999999985
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-35 Score=301.46 Aligned_cols=261 Identities=23% Similarity=0.352 Sum_probs=198.2
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec----CCe
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH----PRH 475 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~ 475 (673)
.++|++.+.||+|+||.||+|... +|+.||+|++..... .....+.+.+|+.++++++||||+++++++.. ...
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFD-VPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccc-cccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 367899999999999999999764 699999999875422 22235667789999999999999999998753 346
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccccee
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 555 (673)
.++|+||+. |+|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||++.
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccce
Confidence 799999996 58999987643 488999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCC----ceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccc-------cccc--
Q 005864 556 FLKPGSSN----WTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS-------SNMN-- 621 (673)
Q Consensus 556 ~~~~~~~~----~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-------~~~~-- 621 (673)
........ .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||.......... ....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV 235 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence 66432221 123467889999998765 458899999999999999999999996433211000 0000
Q ss_pred ------ccccccc---CCCCCCC-CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 622 ------LSLNEIL---DPRLPLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 622 ------~~~~~~~---~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.. ......+ .......+.++.+++.+||+.+|.+|||+.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0000000 0010100 0011223567999999999999999999999886
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=293.03 Aligned_cols=261 Identities=24% Similarity=0.316 Sum_probs=192.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC------
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR------ 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 474 (673)
++|++.+.||+|+||.||+|... +++.||||.+...... ......+.+|++++++++||||+++++++....
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCc-CCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 56889999999999999999764 6899999988643222 122345668999999999999999999987654
Q ss_pred --eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 475 --HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 475 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
..++||||+.+ +|.+.+.... ..+++.++..++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCC
Confidence 34999999975 8888886543 3588999999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCC----CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccc-------ccc
Q 005864 553 IAKFLKPGSS----NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS-------SNM 620 (673)
Q Consensus 553 ~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-------~~~ 620 (673)
++........ ......++..|+|||.+.+. .++.++||||||+++|||++|+.||.......... ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSIT 244 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 9986643221 11234567889999987654 36889999999999999999999986432110000 000
Q ss_pred ccccccc----cCCCCCCCCcch---H------HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 NLSLNEI----LDPRLPLPSRNI---Q------DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 ~~~~~~~----~~~~~~~~~~~~---~------~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....... .......+.... . .....+.+++.+||..||.+|||++|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 245 PEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred hhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0000000 000000000000 0 01235678999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=291.75 Aligned_cols=259 Identities=24% Similarity=0.338 Sum_probs=200.6
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|+..+.||+|++|.||+|... +++.||+|.+.... ......+.+..|+.++++++|+|++++++++...+..++|+||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN-EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc-ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 566788999999999999775 59999999987653 2233456778899999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
+++ +|.+++.... ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||.+........
T Consensus 80 ~~~-~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 80 CDM-DLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred cCc-CHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 985 9999998753 3588999999999999999999999 999999999999999999999999999987654433
Q ss_pred CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccc-------cccccccc---cc--cC
Q 005864 563 NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS-------SNMNLSLN---EI--LD 629 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-------~~~~~~~~---~~--~~ 629 (673)
......++..|+|||.+.+. .++.++||||||+++||+++|+.||.......... ......+. .. .+
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYK 233 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccc
Confidence 33344567789999998766 78999999999999999999999986432211100 00000000 00 01
Q ss_pred CCCCCCC-----cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 630 PRLPLPS-----RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 630 ~~~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..++... ......+..+.+++.+||..||++||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 234 PTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 1111000 011122456999999999999999999999985
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=297.86 Aligned_cols=266 Identities=20% Similarity=0.275 Sum_probs=198.8
Q ss_pred ccHHHHHHHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeee
Q 005864 392 IVYEEIIRATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFC 470 (673)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 470 (673)
...+++....++|++.+.||+|+||.||+|.. .+|+.||+|++...... ....+.+.+|+.++.+++||||+++++++
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~ 85 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-IIHAKRTYRELRLLKHMKHENVIGLLDVF 85 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchh-hHHHHHHHHHHHHHHHcCCCcccceeeee
Confidence 34556677789999999999999999999965 57999999998754322 22345678899999999999999999988
Q ss_pred ecC------CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC
Q 005864 471 SHP------RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY 544 (673)
Q Consensus 471 ~~~------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 544 (673)
... ...+++++++ +++|.+++... .+++..+..++.|+++|++|||+. +++||||||+||++++++
T Consensus 86 ~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 86 TPARSLEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDC 157 (345)
T ss_pred eecccccccccEEEEehhc-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCC
Confidence 543 3467888876 77999888653 378899999999999999999999 999999999999999999
Q ss_pred ceEEecccceeecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-----
Q 005864 545 EARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS----- 618 (673)
Q Consensus 545 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~----- 618 (673)
.+||+|||++..... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...........
T Consensus 158 ~~kl~dfg~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 234 (345)
T cd07877 158 ELKILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 234 (345)
T ss_pred CEEEecccccccccc---cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 999999999875432 2233567889999998766 4678899999999999999999999853221110000
Q ss_pred --ccccccc-----------cccCCCCCCC-CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 619 --NMNLSLN-----------EILDPRLPLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 619 --~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....... ..+....... .......+..+.+++.+|++.||.+||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 235 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred CCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 0000000 0000000000 0000012345889999999999999999999875
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-34 Score=296.66 Aligned_cols=261 Identities=20% Similarity=0.255 Sum_probs=193.8
Q ss_pred cCCC-ccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhH-----------HHHHHHHHHHHHhccCCCcccceee
Q 005864 402 KNFD-AEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEIS-----------VQREFLNEIKALTEIRHRNIVKFYG 468 (673)
Q Consensus 402 ~~~~-~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~l~~ 468 (673)
++|. +.+.||+|+||+||+|... +++.||||.+......... ....+.+|++++.+++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4454 3577999999999999765 6999999998654222100 1125778999999999999999999
Q ss_pred eeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEE
Q 005864 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARV 548 (673)
Q Consensus 469 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 548 (673)
++..++..++||||++ |+|.+++... ..+++.....++.|++.||+|||+. +++|+||+|+||+++.++.+++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRK---IRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEE
Confidence 9999999999999997 5999998754 3478899999999999999999999 9999999999999999999999
Q ss_pred ecccceeecCC--------------CCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccc
Q 005864 549 SDFGIAKFLKP--------------GSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLL 613 (673)
Q Consensus 549 ~Dfg~~~~~~~--------------~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 613 (673)
+|||++..... .........++..|+|||.+.+. .++.++||||+|+++|||++|+.||......
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999986641 11112233467889999998764 4688999999999999999999998643321
Q ss_pred ccccc-------cccccccccc-----CCCCCC-CC---cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 614 SSSSS-------NMNLSLNEIL-----DPRLPL-PS---RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 614 ~~~~~-------~~~~~~~~~~-----~~~~~~-~~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.... .....+.... .+.... +. ......+..+.+++.+||+.+|++|||++|++.
T Consensus 241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 11000 0000000000 000000 00 001112456889999999999999999999985
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=295.47 Aligned_cols=260 Identities=23% Similarity=0.348 Sum_probs=196.5
Q ss_pred HHHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec-CCe
Q 005864 398 IRATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH-PRH 475 (673)
Q Consensus 398 ~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~ 475 (673)
...+++|++.+.||.|+||.||+|... +|+.||+|++...... ....+.+.+|++++.+++||||+++.+++.. ...
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST-PVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccc-cchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 345678999999999999999999654 7999999988653222 2235677889999999999999999999865 557
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccccee
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 555 (673)
.++|+||+ +++|.++++.. .+++..+..++.|++.||+|||+. +++||||+|+||++++++.++++|||.+.
T Consensus 85 ~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred EEEEeehh-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCcccccc
Confidence 88999998 45899888643 367788889999999999999999 99999999999999999999999999997
Q ss_pred ecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccc-------ccccccccccc
Q 005864 556 FLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS-------SSNMNLSLNEI 627 (673)
Q Consensus 556 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~-------~~~~~~~~~~~ 627 (673)
..... .....++..|+|||.+.+ ..++.++||||||+++|||++|+.||......... +..........
T Consensus 157 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (328)
T cd07856 157 IQDPQ---MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTI 233 (328)
T ss_pred ccCCC---cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 54322 223456888999998765 56899999999999999999999998643221000 00000000000
Q ss_pred cCC-------CC----CCCC-cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 628 LDP-------RL----PLPS-RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 628 ~~~-------~~----~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+. .. +.+. ......+.++.+++.+||+.+|++|||+.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 234 CSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred cchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 00 0000 001123456899999999999999999999975
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=288.80 Aligned_cols=258 Identities=24% Similarity=0.367 Sum_probs=196.0
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeeeEEEe
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 481 (673)
|.+.+.||+|++|+||+|... +++.|++|++...... .......+|+..+.+++ |||++++++++..++..++|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS--WEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc--hhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 567889999999999999875 5889999998654322 12334457899999998 9999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+ +|+|.+++.... ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||.+.......
T Consensus 79 ~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (283)
T cd07830 79 YM-EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP 153 (283)
T ss_pred cC-CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCC
Confidence 99 789999987654 24579999999999999999999999 99999999999999999999999999998764322
Q ss_pred CCceecccccccccccccc-cCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-------ccc------cccccc
Q 005864 562 SNWTEFAGTFGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-------NMN------LSLNEI 627 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-------~~~------~~~~~~ 627 (673)
......++..|+|||++. +..++.++|+||||++++||++|+.||......+.... ... ......
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07830 154 -PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASK 232 (283)
T ss_pred -CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcc
Confidence 223456788999999875 45578999999999999999999999864332111000 000 000000
Q ss_pred cCCCCCCCC-----cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 628 LDPRLPLPS-----RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 628 ~~~~~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
++...+... .........+.+++.+||+.+|++|||++|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 233 LGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 110111000 000111356889999999999999999999986
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-35 Score=282.68 Aligned_cols=243 Identities=22% Similarity=0.298 Sum_probs=208.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 479 (673)
.+|....+||+|+||.|..|..+ +.+-+|||++++......+..+--..|-++|.-. +-|.+++++.+|++.+..|.|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 56889999999999999999654 5678999999887666555566667788888777 688999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+.||+|.-+++.-+. +.+..+..+|..||-||-+||++ ||+.||||..|||++.+|.+||+|||+++----
T Consensus 429 MEyvnGGDLMyhiQQ~Gk---FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGK---FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred EEEecCchhhhHHHHhcc---cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccccccc
Confidence 999999999999988754 66788899999999999999999 999999999999999999999999999985434
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
+........||+.|+|||++...+|+..+|.|||||++|||+.|+.||++. ..++....+++.....|.
T Consensus 503 ~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe--------DE~elF~aI~ehnvsyPK--- 571 (683)
T KOG0696|consen 503 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE--------DEDELFQAIMEHNVSYPK--- 571 (683)
T ss_pred CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC--------CHHHHHHHHHHccCcCcc---
Confidence 445566789999999999999999999999999999999999999999843 334556677777766554
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC
Q 005864 640 QDKLISILEVALLCLEESPESRP 662 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rp 662 (673)
..+.+...+++..+.+.|.+|.
T Consensus 572 -slSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 572 -SLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred -cccHHHHHHHHHHhhcCCcccc
Confidence 3445578899999999999985
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=318.17 Aligned_cols=148 Identities=28% Similarity=0.396 Sum_probs=133.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||+|+||+||+|.+. +++.||+|+++............+.+|+.++..++||||+++++++...+..++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57889999999999999999775 68999999987654444455678899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccccee
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 555 (673)
||+++++|.+++...+ .+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999997653 478888999999999999999999 99999999999999999999999999885
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=294.07 Aligned_cols=262 Identities=21% Similarity=0.277 Sum_probs=193.4
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC-----
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR----- 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 474 (673)
.++|++.+.||+|+||.||+|... +++.||+|++......+. ....+.+|++++++++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG-FPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCC-cchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 467999999999999999999765 689999998865432221 2345678999999999999999999875433
Q ss_pred ---eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecc
Q 005864 475 ---HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551 (673)
Q Consensus 475 ---~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 551 (673)
..++|+||+++ ++.+.+.... ..+++..+..++.|+++||+|||+. +++|+||||+||++++++.++++||
T Consensus 86 ~~~~~~lv~~~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 86 KRGSVYMVTPYMDH-DLSGLLENPS--VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred cCceEEEEEecCCc-CHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcC
Confidence 46899999976 7777776543 4589999999999999999999999 9999999999999999999999999
Q ss_pred cceeecCCCCCC-----------ceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-
Q 005864 552 GIAKFLKPGSSN-----------WTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS- 618 (673)
Q Consensus 552 g~~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~- 618 (673)
|++......... .....+++.|+|||.+.+. .++.++||||||+++|||++|+.||...........
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~ 239 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLI 239 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999865432211 1223567889999987654 578999999999999999999999864332110000
Q ss_pred ------ccccc------ccc----ccCCCCCCC-CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 619 ------NMNLS------LNE----ILDPRLPLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 619 ------~~~~~------~~~----~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..... ... ......+.. ..........+.+++.+|++.||++|||+.|++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 00000 000 000001000 0001112256889999999999999999999875
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=316.02 Aligned_cols=253 Identities=22% Similarity=0.260 Sum_probs=211.2
Q ss_pred HHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
-..++|++.++||+|+||.|..++++ +++.||.|++.+...-......-|..|-.+|.--+.+-|++++-.|.++++.|
T Consensus 72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LY 151 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLY 151 (1317)
T ss_pred CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceE
Confidence 33578999999999999999999886 58999999998765555556788999999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+|||||+||+|..++.+.. .+++..+..++..|.-||+-+|+. |+|||||||.|||+|..|++|++|||.+-.+
T Consensus 152 lVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsClkm 225 (1317)
T KOG0612|consen 152 LVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCLKM 225 (1317)
T ss_pred EEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHHhc
Confidence 9999999999999998764 578888889999999999999999 9999999999999999999999999999988
Q ss_pred CCCCC-Cceecccccccccccccc----c-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC-
Q 005864 558 KPGSS-NWTEFAGTFGYVAPELAY----T-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP- 630 (673)
Q Consensus 558 ~~~~~-~~~~~~~~~~y~aPE~~~----~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~- 630 (673)
..+.. .....+|||.|.+||++. + +.|++.+|.||+||++|||+.|..||.-.... +....+++.
T Consensus 226 ~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslv--------eTY~KIm~hk 297 (1317)
T KOG0612|consen 226 DADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLV--------ETYGKIMNHK 297 (1317)
T ss_pred CCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHH--------HHHHHHhchh
Confidence 75544 445678999999999885 2 56899999999999999999999999743332 333445544
Q ss_pred -CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCC---HHHHH
Q 005864 631 -RLPLPSRNIQDKLISILEVALLCLEESPESRPT---MQTVC 668 (673)
Q Consensus 631 -~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps---~~~v~ 668 (673)
.+.+| ...+.+.+..++|.+.+. +|+.|-. +.++-
T Consensus 298 ~~l~FP--~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik 336 (1317)
T KOG0612|consen 298 ESLSFP--DETDVSEEAKDLIEALLC-DREVRLGRNGIEDIK 336 (1317)
T ss_pred hhcCCC--cccccCHHHHHHHHHHhc-ChhhhcccccHHHHH
Confidence 44444 223466778888888775 6667765 66553
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=289.51 Aligned_cols=245 Identities=23% Similarity=0.364 Sum_probs=207.9
Q ss_pred cceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 407 EQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
.+++|+|.||+||-|.+ ++|+.||||++.+....... ...+.+|+.+|+.++||.||.+.-.|++++..++|||.+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq-esqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ-ESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCch-HHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence 47899999999999966 47999999999876554433 47789999999999999999999999999999999999966
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC---CceEEecccceeecCCCCC
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE---YEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~~~~~~~~~ 562 (673)
+..+.+-.... ..+++.....++.||+.||.|||.+ +|+|+||||+||++... -++|+||||+|+++.. ..
T Consensus 648 -DMLEMILSsEk-gRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE-ks 721 (888)
T KOG4236|consen 648 -DMLEMILSSEK-GRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE-KS 721 (888)
T ss_pred -hHHHHHHHhhc-ccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecch-hh
Confidence 66666644332 5688888889999999999999999 99999999999999754 3699999999998854 34
Q ss_pred CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHH
Q 005864 563 NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDK 642 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (673)
.....+||+.|.|||++.++.|...-|+||.|||+|.-+.|..||... ++.-+++.+..+..|+..|.+.
T Consensus 722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd----------EdIndQIQNAaFMyPp~PW~ei 791 (888)
T KOG4236|consen 722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED----------EDINDQIQNAAFMYPPNPWSEI 791 (888)
T ss_pred hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc----------cchhHHhhccccccCCCchhhc
Confidence 556789999999999999999999999999999999999999998621 2233344455666777788899
Q ss_pred HHHHHHHHHHcccCCCCCCCCHHHHH
Q 005864 643 LISILEVALLCLEESPESRPTMQTVC 668 (673)
Q Consensus 643 ~~~l~~li~~cl~~dp~~Rps~~~v~ 668 (673)
+.+..++|...|+..-.+|-|.++.+
T Consensus 792 s~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 792 SPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred CHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 99999999999999999998887654
|
|
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-34 Score=295.72 Aligned_cols=256 Identities=20% Similarity=0.327 Sum_probs=192.1
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC------
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP------ 473 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 473 (673)
..+|...+.||+|+||.||+|... +|+.||+|++...... ......+.+|+.++++++||||+++++++...
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQS-EIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcccc-ccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 368999999999999999999764 6999999998754322 22345688999999999999999999998654
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccc
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGI 553 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 553 (673)
...++|+||+.. ++.++.. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||+
T Consensus 93 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 93 QDFYLVMPYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred ceEEEEeccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCC
Confidence 245899999975 7776653 2478899999999999999999999 999999999999999999999999999
Q ss_pred eeecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccc-----------
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN----------- 621 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~----------- 621 (673)
++.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||..............
T Consensus 164 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07879 164 ARHADA---EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQ 240 (342)
T ss_pred CcCCCC---CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 875432 2233457888999999876 4588899999999999999999999974332111000000
Q ss_pred ----cccccccCCCCCCCCcc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 622 ----LSLNEILDPRLPLPSRN----IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 622 ----~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.............+... .......+.+++.+||+.||++||+++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 241 KLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred HhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00000000000000000 0112345889999999999999999999984
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-34 Score=294.74 Aligned_cols=258 Identities=21% Similarity=0.293 Sum_probs=194.9
Q ss_pred HhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC----
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR---- 474 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 474 (673)
..++|++.+.||+|+||.||+|.. .+|+.||||++.... ........+.+|+.++++++||||+++++++..+.
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 456899999999999999999965 479999999986432 22233456889999999999999999999987543
Q ss_pred --eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 475 --HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 475 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
..++|+||+ +++|.+++.. ..+++..+..++.|+++|++|||+. +|+||||||+||+++.++.++++|||
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecc
Confidence 358999998 6799988864 2478999999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc------ccccc
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM------NLSLN 625 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~------~~~~~ 625 (673)
++...... .....+++.|+|||.+.+ ..++.++|+||+|+++|++++|+.||............. ...+.
T Consensus 164 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 240 (343)
T cd07880 164 LARQTDSE---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFV 240 (343)
T ss_pred cccccccC---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 99765322 233457889999998875 457889999999999999999999987432211000000 00000
Q ss_pred cccC--------CCCCCCC-----cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 EILD--------PRLPLPS-----RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ~~~~--------~~~~~~~-----~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.+. ..++... .........+.+++.+|++.||++|||+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 241 QKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000 0000000 001122345889999999999999999999984
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-36 Score=298.08 Aligned_cols=297 Identities=27% Similarity=0.257 Sum_probs=233.0
Q ss_pred CCCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccc
Q 005864 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI 80 (673)
Q Consensus 1 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~ 80 (673)
+|+|+.+-+..|.++++|+.+.|.+|.++ .+|.......+|+.|+|.+|.|+....++++.++.|+.|||+.|.|+.+.
T Consensus 87 nNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~ 165 (873)
T KOG4194|consen 87 NNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIP 165 (873)
T ss_pred ccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhccc
Confidence 47888888899999999999999999999 77877677778999999999999888888999999999999999999999
Q ss_pred ccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCC
Q 005864 81 SEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLK 160 (673)
Q Consensus 81 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~ 160 (673)
...|..-.++++|+|++|.|+.+..+.|.++.+|.+|.|++|+|+...+..|.+++.|+.|+|..|+|.-.....|.+++
T Consensus 166 ~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~ 245 (873)
T KOG4194|consen 166 KPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLP 245 (873)
T ss_pred CCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCch
Confidence 99998888999999999999999999999999999999999999977777888899999999999998744356677777
Q ss_pred CCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeec
Q 005864 161 SLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLS 240 (673)
Q Consensus 161 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls 240 (673)
+|+.|.|..|.+......+|..+.++++|+|..|++...-..++.++++|+.|+||+|.|..+.+..+.-.++|+.|+|+
T Consensus 246 Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs 325 (873)
T KOG4194|consen 246 SLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLS 325 (873)
T ss_pred hhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEecc
Confidence 77777777777775555566667777777777777765555666666667777777776666666666666666777777
Q ss_pred CCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCC
Q 005864 241 HNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPN 298 (673)
Q Consensus 241 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~ 298 (673)
+|+|+...+..|..+..|++|+|++|++..+...+|..+.+|++|||+.|.++..+.+
T Consensus 326 ~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IED 383 (873)
T KOG4194|consen 326 SNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIED 383 (873)
T ss_pred ccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEec
Confidence 7766665566666666666666666666666566666666666666666666655443
|
|
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-34 Score=294.05 Aligned_cols=257 Identities=23% Similarity=0.291 Sum_probs=190.9
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-------
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP------- 473 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------- 473 (673)
.+|.+.+.||.|+||.||+|.. .+|+.||+|.+..... ...+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~---~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP---QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC---chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 5788999999999999999966 4689999998865422 3456788899999999999999999876543
Q ss_pred -------CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-CCc
Q 005864 474 -------RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-EYE 545 (673)
Q Consensus 474 -------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~ 545 (673)
...++|+||+++ +|.+++... .+++..+..++.|++.|+.|||+. +++||||||+||+++. ++.
T Consensus 82 ~~~~~~~~~~~lv~e~~~~-~L~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~ 153 (342)
T cd07854 82 VGSLTELNSVYIVQEYMET-DLANVLEQG----PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLV 153 (342)
T ss_pred cccccccceEEEEeecccc-cHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCce
Confidence 357899999974 898888643 478899999999999999999999 9999999999999974 567
Q ss_pred eEEecccceeecCCCCCC---ceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-
Q 005864 546 ARVSDFGIAKFLKPGSSN---WTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM- 620 (673)
Q Consensus 546 ~kl~Dfg~~~~~~~~~~~---~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~- 620 (673)
++++|||.+......... .....++..|+|||.+.. ..++.++|||||||++|||++|+.||......+......
T Consensus 154 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~ 233 (342)
T cd07854 154 LKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILE 233 (342)
T ss_pred EEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 899999999876432221 122357888999997654 567889999999999999999999996433211100000
Q ss_pred ------ccccc-------cccCCCCCCCCc----chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 ------NLSLN-------EILDPRLPLPSR----NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 ------~~~~~-------~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..... .........+.. .......++.+++.+||+.||.+|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 234 SVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred hcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 00000 000000000000 00123356889999999999999999999974
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-34 Score=294.39 Aligned_cols=258 Identities=19% Similarity=0.295 Sum_probs=195.8
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe---
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH--- 475 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--- 475 (673)
..++|++.+.||+|++|.||+|+.. +++.||+|++...... ....+.+.+|+.++++++|||++++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQS-AIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccch-hhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 3567999999999999999999775 6889999988654222 2234667789999999999999999998866554
Q ss_pred ---eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 476 ---SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 476 ---~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
.++|+||+ +++|.+++.. ..+++..+..++.|++.|++|||+. +++||||+|+||++++++.++|+|||
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999998 5699999875 3488999999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------ccccc
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLSL 624 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~~ 624 (673)
++...... .....++..|+|||.+.+ ..++.++||||+|+++||+++|+.||............ .....
T Consensus 164 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 240 (343)
T cd07851 164 LARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELL 240 (343)
T ss_pred cccccccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Confidence 99865332 233467888999998765 36788999999999999999999998643221110000 00000
Q ss_pred --------ccccCCCCCCC-C---cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 625 --------NEILDPRLPLP-S---RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 625 --------~~~~~~~~~~~-~---~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+....... . ......+..+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 241 QKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred hhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 00000000000 0 000112457899999999999999999999875
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-34 Score=270.60 Aligned_cols=261 Identities=21% Similarity=0.305 Sum_probs=206.5
Q ss_pred HHHHHHhcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceee
Q 005864 395 EEIIRATKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468 (673)
Q Consensus 395 ~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~ 468 (673)
.++.....+++....+-+|.||.||+|.|. +.+.|.||.++.. ..+-....+..|.-.+..+.|||+..+.+
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~--AS~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH--ASQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc--ccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 345555567788888999999999999553 3446777877544 23335677899999999999999999999
Q ss_pred eeec-CCeeeEEEecccCCChHHHHhcC-----CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC
Q 005864 469 FCSH-PRHSFLVYECLERGSLAEILSND-----GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS 542 (673)
Q Consensus 469 ~~~~-~~~~~lv~e~~~~gsL~~~l~~~-----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 542 (673)
++.+ ...++++|.++.-|+|..++... .....++..+...++.|++.|++|||.+ ++||.||.++|.++++
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDD 431 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehh
Confidence 9865 46789999999999999999832 2334567778888999999999999999 9999999999999999
Q ss_pred CCceEEecccceeecCCCCCCc--eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccc
Q 005864 543 EYEARVSDFGIAKFLKPGSSNW--TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSN 619 (673)
Q Consensus 543 ~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~ 619 (673)
..+||++|=.+++..-+.+... ...-.+..||+||.+....|+.++|||||||++|||+| |+.||..+++.+..
T Consensus 432 ~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~--- 508 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME--- 508 (563)
T ss_pred heeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH---
Confidence 9999999999999775544322 11224678999999999999999999999999999998 99998755543321
Q ss_pred cccccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 620 MNLSLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 620 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.-+.|+ ++..|..+ +.++..++.-||+.+|++||+++|++.-|+
T Consensus 509 -----~ylkdGyRlaQP~NC----PDeLf~vMacCWallpeeRPsf~Qlv~cLs 553 (563)
T KOG1024|consen 509 -----HYLKDGYRLAQPFNC----PDELFTVMACCWALLPEERPSFSQLVICLS 553 (563)
T ss_pred -----HHHhccceecCCCCC----cHHHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence 111222 33333333 335899999999999999999999998775
|
|
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-34 Score=242.80 Aligned_cols=260 Identities=19% Similarity=0.292 Sum_probs=198.7
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|+..+.||+|.||+||+|+.. +++.||+|++.-... ++.......+|+-+++.++|.|||++++....+....+|+|
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd-degvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC-CCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 4667788999999999999654 688999999876532 23345667899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
||.. +|..+..... ..++...+.+.+.|+.+|+.++|++ ++.|||+||.|.+++.+|+.|++|||+++.+.-..
T Consensus 82 ~cdq-dlkkyfdsln--g~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 82 FCDQ-DLKKYFDSLN--GDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred HhhH-HHHHHHHhcC--CcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 9987 8888877654 4578888999999999999999999 99999999999999999999999999999776555
Q ss_pred CCceecccccccccccccccCC-cCcchhHHHHHHHHHHHHh-CCCCCccccccccc-------ccccccccccc---cC
Q 005864 562 SNWTEFAGTFGYVAPELAYTMK-VTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSS-------SSNMNLSLNEI---LD 629 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~-------~~~~~~~~~~~---~~ 629 (673)
...+..+.|.+|++|.++.+.+ |++..|+||-|||+.|+.. |++-|.+.+..++. +...++.+..+ -|
T Consensus 156 rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpd 235 (292)
T KOG0662|consen 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPD 235 (292)
T ss_pred EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCC
Confidence 5666777899999999988765 7889999999999999997 44445433222111 11111111111 11
Q ss_pred CC-CCCC--CcchHHHH----HHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 630 PR-LPLP--SRNIQDKL----ISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 630 ~~-~~~~--~~~~~~~~----~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
-+ ++.. ...+.... ..-.+++.+.+.-+|.+|-++++.++
T Consensus 236 yk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 236 YKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 00 1111 11222221 22456778888889999999998875
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-33 Score=289.12 Aligned_cols=258 Identities=22% Similarity=0.339 Sum_probs=191.2
Q ss_pred CCCccceeccCCcEEEEEEEeC-C--CCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecC----C
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-S--GEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHP----R 474 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~----~ 474 (673)
+|++.+.||+|+||.||+++.. . +..||+|++..... .....+.+.+|++++.++ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFS-KKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccc-cchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 4778899999999999999764 3 78999998864322 222356678899999999 599999999875432 4
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++++||+. ++|.+++... ..+++..+..++.|++.||.|||+. +++||||||+||++++++.+||+|||++
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSG---QPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 5688889886 5899998754 3588999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC----Cceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccc-------ccccc
Q 005864 555 KFLKPGSS----NWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS-------SNMNL 622 (673)
Q Consensus 555 ~~~~~~~~----~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-------~~~~~ 622 (673)
........ ......|+..|+|||++.+ ..++.++|+||+|+++|+|++|+.||.......... .....
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEE 232 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 86643221 1223468899999998765 468899999999999999999999986432110000 00000
Q ss_pred ccccc-----------cC--CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 623 SLNEI-----------LD--PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 623 ~~~~~-----------~~--~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+ .. +..... .........+.+++.+|++.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 233 TLSRIGSPKAQNYIRSLPNIPKKPFE-SIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHhhhhhhHHHHHHhccccCCcchH-hhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000 00 000000 000112356889999999999999999999874
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=292.72 Aligned_cols=259 Identities=24% Similarity=0.390 Sum_probs=214.6
Q ss_pred cHHHHHHHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeee
Q 005864 393 VYEEIIRATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFC 470 (673)
Q Consensus 393 ~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 470 (673)
.++.....++.|++.+.||.|.+|.||+++. ++|+.+|+|+....... .+++..|..+++.. .|||++.++|++
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~----deEiE~eynil~~~~~hpnv~~fyg~~ 85 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE----EEEIELEYNMLKKYSHHPNVATFYGAF 85 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc----cHHHHHHHHHHHhccCCCCcceEEEEE
Confidence 3445555677899999999999999999965 46899999988654333 45677788898888 699999999998
Q ss_pred e-----cCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc
Q 005864 471 S-----HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE 545 (673)
Q Consensus 471 ~-----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 545 (673)
. .++..|+|||||.+||..|+++... ...+.|..+..|+..++.|+.+||.. .++|||+|-.||+++.++.
T Consensus 86 ~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~ 161 (953)
T KOG0587|consen 86 IKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAE 161 (953)
T ss_pred EEecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCc
Confidence 5 3578899999999999999998776 56799999999999999999999999 9999999999999999999
Q ss_pred eEEecccceeecCCCCCCceeccccccccccccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc
Q 005864 546 ARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM 620 (673)
Q Consensus 546 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~ 620 (673)
||++|||.+..+..........+||+.|||||++.. ..|+..+|+||+|++..||.-|.+|+..+.+....
T Consensus 162 VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraL---- 237 (953)
T KOG0587|consen 162 VKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRAL---- 237 (953)
T ss_pred EEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhh----
Confidence 999999999988877777788899999999999864 34778999999999999999999998755443221
Q ss_pred ccccccccCCCCCCC-CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 NLSLNEILDPRLPLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 ~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
. .-++-+.| -..+.....++.++|..|+.+|-++||++.++++
T Consensus 238 ----F--~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 238 ----F--LIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred ----c--cCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 1 11111111 1234556678999999999999999999999875
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=268.74 Aligned_cols=250 Identities=24% Similarity=0.325 Sum_probs=193.2
Q ss_pred cceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEeccc
Q 005864 407 EQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLE 484 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 484 (673)
...||.|+||+|++-.++ +|+..|||++..... ..+++++..|.++..+- +.||||+++|.+..++..|+.||.|+
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~--~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd 146 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI--EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD 146 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc--hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence 356999999999999664 799999999987644 34577788888866555 79999999999999999999999997
Q ss_pred CCChHHHHhcC--CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 485 RGSLAEILSND--GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 485 ~gsL~~~l~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
- |+..+-+.- -....+++.-.-.|.....+||.||-+.. .|+|||+||+||+++..|.+|+||||.+..+... -
T Consensus 147 ~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S-i 222 (361)
T KOG1006|consen 147 I-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS-I 222 (361)
T ss_pred h-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHH-H
Confidence 5 766554321 11245777777888889999999999874 8999999999999999999999999998765322 1
Q ss_pred Cceeccccccccccccccc--CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC--Ccc
Q 005864 563 NWTEFAGTFGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP--SRN 638 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 638 (673)
..+.-+|-..|||||.+.. ..|+-+|||||+|+++||+.||..||..- ....+++..+..+..+.. ...
T Consensus 223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w-------~svfeql~~Vv~gdpp~l~~~~~ 295 (361)
T KOG1006|consen 223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKW-------DSVFEQLCQVVIGDPPILLFDKE 295 (361)
T ss_pred HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchH-------HHHHHHHHHHHcCCCCeecCccc
Confidence 1233456678999998863 35899999999999999999999998621 112333334444433322 222
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+....+..+|..|+-+|-..||+..++.+
T Consensus 296 ~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 296 CVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred ccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 2345677999999999999999999998865
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=269.35 Aligned_cols=219 Identities=21% Similarity=0.187 Sum_probs=175.4
Q ss_pred CCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCChHHH
Q 005864 413 GGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEI 491 (673)
Q Consensus 413 G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~ 491 (673)
|.+|.||+++.. +|+.||+|++.... .+..|...+....|||++++++++...+..++||||+++|+|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 899999999764 68999999986532 223445555566799999999999999999999999999999999
Q ss_pred HhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCceeccccc
Q 005864 492 LSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF 571 (673)
Q Consensus 492 l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 571 (673)
+.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||.+...... .....++.
T Consensus 76 l~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~~ 146 (237)
T cd05576 76 ISKFL---NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVEN 146 (237)
T ss_pred HHHhc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhccccc---cccCCcCc
Confidence 97653 488999999999999999999999 9999999999999999999999999988655432 12234567
Q ss_pred ccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHH
Q 005864 572 GYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVAL 651 (673)
Q Consensus 572 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 651 (673)
.|+|||...+..++.++||||+|+++|||++|+.|++..... .... ..+..+. ..+..+.+++.
T Consensus 147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~----------~~~~--~~~~~~~----~~~~~~~~li~ 210 (237)
T cd05576 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG----------INTH--TTLNIPE----WVSEEARSLLQ 210 (237)
T ss_pred cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh----------cccc--cccCCcc----cCCHHHHHHHH
Confidence 899999998888999999999999999999999886532110 0000 0111111 23345889999
Q ss_pred HcccCCCCCCCCH
Q 005864 652 LCLEESPESRPTM 664 (673)
Q Consensus 652 ~cl~~dp~~Rps~ 664 (673)
+|++.||++||++
T Consensus 211 ~~l~~dp~~R~~~ 223 (237)
T cd05576 211 QLLQFNPTERLGA 223 (237)
T ss_pred HHccCCHHHhcCC
Confidence 9999999999996
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=262.55 Aligned_cols=251 Identities=22% Similarity=0.312 Sum_probs=209.9
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 478 (673)
.++|+..++||+|+|.+|..++++ +.+.||+|++++....+.+...-...|-.+..+- +||.+|-++.+|+++...+.
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 467999999999999999999875 5888999999987777666677777888888877 79999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|.||++||+|.-++++.+ .++++.+..+...|.-||.|||+. ||+.||||..||++|..|.+|+.|+|+++---
T Consensus 329 vieyv~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEEecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcCC
Confidence 999999999999888764 488899999999999999999999 99999999999999999999999999998544
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccc-cccccCCCCCCCCc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLS-LNEILDPRLPLPSR 637 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 637 (673)
.+....+.+.||+.|.|||.+.+..|...+|.|++||+++||+.|+.||+-... +....+.+.. ++-++...++.|..
T Consensus 403 ~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm-~n~d~ntedylfqvilekqiriprs 481 (593)
T KOG0695|consen 403 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGM-DNPDMNTEDYLFQVILEKQIRIPRS 481 (593)
T ss_pred CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecC-CCcccchhHHHHHHHhhhcccccce
Confidence 444556778999999999999999999999999999999999999999985542 2222222222 33445555555533
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCC
Q 005864 638 NIQDKLISILEVALLCLEESPESRP 662 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rp 662 (673)
. +.....+++.-+++||++|.
T Consensus 482 l----svkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 482 L----SVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred e----ehhhHHHHHHhhcCCcHHhc
Confidence 2 23456788889999999985
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-34 Score=275.17 Aligned_cols=256 Identities=27% Similarity=0.371 Sum_probs=196.8
Q ss_pred cCCCccceeccCCcEEEEEE-EeCCCCEEEEEeeccchhhhhH----HHHHHHHHHHHHhccCCCcccceeeeee-cCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEIS----VQREFLNEIKALTEIRHRNIVKFYGFCS-HPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~ 475 (673)
++|-+...||+|+|+.||+| .+...+.||||+-........+ ..+...+|..+.+.++||.||++++|+. +.+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 45667788999999999999 5567889999987654333222 2345788999999999999999999996 4567
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC---CceEEeccc
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE---YEARVSDFG 552 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg 552 (673)
+|-|.|||+|.+|.-+++..+ .+++.++..|+.||+.||.||.+.. ++|+|-||||.||++..+ |.+||.|||
T Consensus 543 FCTVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred ceeeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEeeecc
Confidence 899999999999999998874 5889999999999999999999874 599999999999999543 789999999
Q ss_pred ceeecCCCCCC-------ceecccccccccccccccC----CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccc
Q 005864 553 IAKFLKPGSSN-------WTEFAGTFGYVAPELAYTM----KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN 621 (673)
Q Consensus 553 ~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~----~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 621 (673)
+++.++.+... .+..+||.+|++||.+.-+ .++.|+||||.|||+|+.+.|+.||.....-.+... +
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILq--e 696 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQ--E 696 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHh--h
Confidence 99999765432 2456799999999987533 478899999999999999999999984321111000 0
Q ss_pred cccccccC-CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 005864 622 LSLNEILD-PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVC 668 (673)
Q Consensus 622 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~ 668 (673)
..++. ....+|+. +....+...+|.+||++--++|....|+.
T Consensus 697 ---NTIlkAtEVqFP~K--PvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 697 ---NTILKATEVQFPPK--PVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred ---hchhcceeccCCCC--CccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 00111 11112211 12344578899999999888888777654
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=259.51 Aligned_cols=261 Identities=25% Similarity=0.352 Sum_probs=192.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--------
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH-------- 472 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 472 (673)
..|+....||+|.||+||+|+.+ +|++||+|++...... ........+|+.++..++|+|++.++..|..
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneK-eGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccc-cCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 44566678999999999999765 5888999876442211 2233456789999999999999999998843
Q ss_pred CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 473 PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
....|+||++|+. +|.-++.... ..++..++.++++++..||.|+|.. .|+|||+||.|++++.++.+||+|||
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~~--vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFG 169 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNRK--VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFG 169 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCcc--ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccc
Confidence 2347999999998 8999887653 4588899999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCC----CCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccc-------------
Q 005864 553 IAKFLKPG----SSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLS------------- 614 (673)
Q Consensus 553 ~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------------- 614 (673)
+++.+... ...++..+.|.+|++||.+.+ ..|+++.|||..|||+.||+||.+-+.......
T Consensus 170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 99755322 123455677999999998875 568999999999999999999998875322110
Q ss_pred --ccccccccccccccC-CCCCC-CCcchHHH------HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 615 --SSSSNMNLSLNEILD-PRLPL-PSRNIQDK------LISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 615 --~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~------~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.......+.+.+. +.++. ......+. ..+..+++..++..||.+|+.++|++.
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 000000000111110 00100 00011111 125778999999999999999999874
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=280.39 Aligned_cols=243 Identities=24% Similarity=0.402 Sum_probs=205.3
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCC-EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGE-VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~-~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+++.+..+|-|+||.|=.++..+.. .+|+|++++.-.-+....+.+..|-.+|...+.|.||++|..|.++...|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 34556677999999999999775433 48999988776666667788999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|-|-||.++..++.++ .++..++..++..+.+|++|||++ +||.|||||+|.+++.+|.+|+.|||+|+.+..+
T Consensus 500 EaClGGElWTiLrdRg---~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 500 EACLGGELWTILRDRG---SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred HhhcCchhhhhhhhcC---CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 9999999999999875 488888999999999999999999 9999999999999999999999999999999877
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC--CCCCCCcc
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP--RLPLPSRN 638 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 638 (673)
...|+ ++||+.|.|||++.+...+.++|.||+|+++||+++|.+||...+++.... .++.+ .+.+|
T Consensus 574 ~KTwT-FcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn--------~ILkGid~i~~P--- 641 (732)
T KOG0614|consen 574 RKTWT-FCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYN--------LILKGIDKIEFP--- 641 (732)
T ss_pred Cceee-ecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHH--------HHHhhhhhhhcc---
Confidence 66654 789999999999999999999999999999999999999998655443221 11111 11122
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCC
Q 005864 639 IQDKLISILEVALLCLEESPESRPT 663 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps 663 (673)
........+++++....+|.+|.-
T Consensus 642 -r~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 642 -RRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred -cccchhHHHHHHHHHhcCcHhhhc
Confidence 233445778999999999999964
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=284.10 Aligned_cols=239 Identities=26% Similarity=0.318 Sum_probs=193.0
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 478 (673)
++.|.....+|.|+|+.|-.... ++++..+||++.+.. .+..+|+.++... .||||+++.+.+.++...|+
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-------~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~ 393 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-------DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYL 393 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc-------cccccccchhhhhcCCCcceeecceecCCceeee
Confidence 56788888899999999988855 568999999987651 2334577666666 69999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe-CCCCceEEecccceeec
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL-SSEYEARVSDFGIAKFL 557 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill-~~~~~~kl~Dfg~~~~~ 557 (673)
|||.+.|+-+.+.+.... .+. .++..|+.+|+.|+.|||++ |+|||||||+|||+ ++.++++|+|||.++..
T Consensus 394 v~e~l~g~ell~ri~~~~---~~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~ 466 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRSKP---EFC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSEL 466 (612)
T ss_pred eehhccccHHHHHHHhcc---hhH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhC
Confidence 999999998888887653 233 67778999999999999999 99999999999999 58899999999999876
Q ss_pred CCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 558 KPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
.+. ....+-|..|.|||+.....|++++|+||||++||+|++|+.||..... ..+....+..+++.
T Consensus 467 ~~~---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~-------~~ei~~~i~~~~~s---- 532 (612)
T KOG0603|consen 467 ERS---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPA-------GIEIHTRIQMPKFS---- 532 (612)
T ss_pred chh---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCc-------hHHHHHhhcCCccc----
Confidence 544 2334567899999999999999999999999999999999999873221 01111111122211
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+....+|+.+||+.||.+||+|.|+..
T Consensus 533 --~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 533 --ECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred --cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 445567889999999999999999999864
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.6e-32 Score=294.34 Aligned_cols=259 Identities=19% Similarity=0.217 Sum_probs=168.8
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-C----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeee-----
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-S----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGF----- 469 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~----- 469 (673)
..++|++.+.||+|+||.||+|.+. + +..||+|++...... +....| .+....+.+++.+...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~-----e~~~~e--~l~~~~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV-----EIWMNE--RVRRACPNSCADFVYGFLEPV 202 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh-----HHHHHH--HHHhhchhhHHHHHHhhhccc
Confidence 4568999999999999999999775 4 689999987543211 111111 1111122222222211
Q ss_pred -eecCCeeeEEEecccCCChHHHHhcCCCC-----------------ccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEe
Q 005864 470 -CSHPRHSFLVYECLERGSLAEILSNDGSI-----------------KEFSWIVRTNVIKSVANALSYMHHDCFPPIVHR 531 (673)
Q Consensus 470 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 531 (673)
+..+...++|+||+++++|.+++...... .......+..++.|++.||+|||+. +|+||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHR 279 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHR 279 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeC
Confidence 24566789999999999999998754210 0112344567999999999999999 99999
Q ss_pred cCCCCCeEeCC-CCceEEecccceeecCCCC-CCceecccccccccccccccC----------------------CcCcc
Q 005864 532 DISSKNVLLSS-EYEARVSDFGIAKFLKPGS-SNWTEFAGTFGYVAPELAYTM----------------------KVTEK 587 (673)
Q Consensus 532 dlk~~Nill~~-~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~----------------------~~~~~ 587 (673)
||||+|||+++ ++.+||+|||+++.+.... .......+++.|+|||.+... .++.+
T Consensus 280 DLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k 359 (566)
T PLN03225 280 DVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR 359 (566)
T ss_pred cCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence 99999999986 5789999999998664332 223456789999999965322 23456
Q ss_pred hhHHHHHHHHHHHHhCCCCCccccc-----ccccccccccccccccCCCCCCC----CcchHHHHHHHHHHHHHcccCCC
Q 005864 588 CDVYSFGVLALEVIKGKHPRDFISL-----LSSSSSNMNLSLNEILDPRLPLP----SRNIQDKLISILEVALLCLEESP 658 (673)
Q Consensus 588 ~Dv~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dp 658 (673)
+||||+||++|||+++..|++.... ....... ...+.....+..... .+..........+++.+|++.||
T Consensus 360 ~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP 438 (566)
T PLN03225 360 FDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYD-LVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKG 438 (566)
T ss_pred cccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCc-HHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCc
Confidence 7999999999999998877542110 0000000 001111111111000 00000111235589999999999
Q ss_pred CCCCCHHHHHH
Q 005864 659 ESRPTMQTVCQ 669 (673)
Q Consensus 659 ~~Rps~~~v~~ 669 (673)
++|||++|+++
T Consensus 439 ~kR~ta~e~L~ 449 (566)
T PLN03225 439 RQRISAKAALA 449 (566)
T ss_pred ccCCCHHHHhC
Confidence 99999999985
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-31 Score=264.33 Aligned_cols=239 Identities=29% Similarity=0.450 Sum_probs=192.9
Q ss_pred CcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCChHHHH
Q 005864 414 GQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEIL 492 (673)
Q Consensus 414 ~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l 492 (673)
+||.||+|... +|+.+|+|++....... ..+.+.+|++.+++++|+|++++++++......++++||+++++|.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKK--KRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEeccccccc--HHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 58999999876 58999999987643322 1678999999999999999999999999999999999999999999999
Q ss_pred hcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCceecccccc
Q 005864 493 SNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFG 572 (673)
Q Consensus 493 ~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~ 572 (673)
..... +++..+..++.++++++.|||+. +++|+||+|+||++++++.++++|||.+....... ......++..
T Consensus 79 ~~~~~---~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~ 151 (244)
T smart00220 79 KKRGR---LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPE 151 (244)
T ss_pred HhccC---CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcC
Confidence 76532 78899999999999999999999 99999999999999999999999999998765432 2344567889
Q ss_pred cccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHH
Q 005864 573 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALL 652 (673)
Q Consensus 573 y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 652 (673)
|+|||......++.++||||+|++++++++|..||...... ............... ......+.++.+++.+
T Consensus 152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ 223 (244)
T smart00220 152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL-------LELFKKIGKPKPPFP-PPEWKISPEAKDLIRK 223 (244)
T ss_pred CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH-------HHHHHHHhccCCCCc-cccccCCHHHHHHHHH
Confidence 99999998888999999999999999999999998642111 111111111111111 1100134568899999
Q ss_pred cccCCCCCCCCHHHHHH
Q 005864 653 CLEESPESRPTMQTVCQ 669 (673)
Q Consensus 653 cl~~dp~~Rps~~~v~~ 669 (673)
|+..+|++||++.++++
T Consensus 224 ~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 224 LLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HccCCchhccCHHHHhh
Confidence 99999999999999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-32 Score=263.92 Aligned_cols=258 Identities=21% Similarity=0.271 Sum_probs=197.5
Q ss_pred HhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CC-----cccceeeeeec
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HR-----NIVKFYGFCSH 472 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~ 472 (673)
.+++|.++..+|+|.||.|.+..+ ..+..||||+++.... ..+...-|+++++++. +. -+|.+.++|..
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k----YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdy 162 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK----YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDY 162 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH----HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhc
Confidence 367899999999999999999954 3578999999875422 3455677999999993 22 46788899999
Q ss_pred CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC----------
Q 005864 473 PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS---------- 542 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---------- 542 (673)
.++.++|+|.+ |-|+.+++..+. ..+++..++..|+.|+++++++||+. +++|-||||+||++.+
T Consensus 163 rghiCivfell-G~S~~dFlk~N~-y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k 237 (415)
T KOG0671|consen 163 RGHICIVFELL-GLSTFDFLKENN-YIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPK 237 (415)
T ss_pred cCceEEEEecc-ChhHHHHhccCC-ccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccC
Confidence 99999999987 449999998864 46799999999999999999999999 9999999999999941
Q ss_pred ----------CCceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccc
Q 005864 543 ----------EYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISL 612 (673)
Q Consensus 543 ----------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 612 (673)
+..++|+|||.|+..... .+..+.|..|+|||++.+-+++.++||||+||||+|+.||..-|..-+.
T Consensus 238 ~~~~~~r~~ks~~I~vIDFGsAtf~~e~---hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen 314 (415)
T KOG0671|consen 238 KKVCFIRPLKSTAIKVIDFGSATFDHEH---HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN 314 (415)
T ss_pred CccceeccCCCcceEEEecCCcceeccC---cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc
Confidence 234899999999875433 3667889999999999999999999999999999999999998864432
Q ss_pred ccc-------cccccc-----ccccccc-CCCCCCC---------------------CcchHHHHHHHHHHHHHcccCCC
Q 005864 613 LSS-------SSSNMN-----LSLNEIL-DPRLPLP---------------------SRNIQDKLISILEVALLCLEESP 658 (673)
Q Consensus 613 ~~~-------~~~~~~-----~~~~~~~-~~~~~~~---------------------~~~~~~~~~~l~~li~~cl~~dp 658 (673)
.+. .++... ....+.+ .+++..+ -.....+..++.+++.+||..||
T Consensus 315 ~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP 394 (415)
T KOG0671|consen 315 LEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDP 394 (415)
T ss_pred HHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCc
Confidence 211 000000 0000000 0001000 00112334569999999999999
Q ss_pred CCCCCHHHHHH
Q 005864 659 ESRPTMQTVCQ 669 (673)
Q Consensus 659 ~~Rps~~~v~~ 669 (673)
.+|+|+.|++.
T Consensus 395 ~~RiTl~EAL~ 405 (415)
T KOG0671|consen 395 ARRITLREALS 405 (415)
T ss_pred cccccHHHHhc
Confidence 99999999875
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.1e-33 Score=288.19 Aligned_cols=242 Identities=28% Similarity=0.413 Sum_probs=188.5
Q ss_pred CCccceeccCCcEE-EEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEe
Q 005864 404 FDAEQCIGIGGQAS-VYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 404 ~~~~~~ig~G~~g~-vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 481 (673)
|...+++|.|+.|+ ||+|.. +|+.||||++-.. ......+|+..++.- +|||||++++.-.++...|++.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e------~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE------FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhH------hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 44556799998887 588988 7899999987543 345667899999999 59999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCc-cchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC---C--CceEEeccccee
Q 005864 482 CLERGSLAEILSNDGSIK-EFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS---E--YEARVSDFGIAK 555 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~-~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~--~~~kl~Dfg~~~ 555 (673)
.|.. +|.+++...+... .......+.+..|++.|+++||+. +||||||||.|||++. + .+++|+|||+++
T Consensus 584 LC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK 659 (903)
T KOG1027|consen 584 LCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSK 659 (903)
T ss_pred Hhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccccccc
Confidence 9976 9999998742111 111134567889999999999998 9999999999999976 3 469999999999
Q ss_pred ecCCCCCC---ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhC-CCCCcccccccccccccccccccccCCC
Q 005864 556 FLKPGSSN---WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-KHPRDFISLLSSSSSNMNLSLNEILDPR 631 (673)
Q Consensus 556 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
.+..+... .....||-||+|||++....-+.++|+||+||++|+.++| .+||...-..+. .++...
T Consensus 660 kl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~----------NIl~~~ 729 (903)
T KOG1027|consen 660 KLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA----------NILTGN 729 (903)
T ss_pred ccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh----------hhhcCc
Confidence 98766543 3456799999999999998888999999999999999985 999974322111 111111
Q ss_pred CC--CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 632 LP--LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 632 ~~--~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.. ... ...+. +..++|.+|++++|..||++.+|+.
T Consensus 730 ~~L~~L~-~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 730 YTLVHLE-PLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred cceeeec-cCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 10 000 00111 5789999999999999999999974
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-31 Score=278.58 Aligned_cols=264 Identities=17% Similarity=0.196 Sum_probs=182.9
Q ss_pred hcCCCccceeccCCcEEEEEEEe-----------------CCCCEEEEEeeccchhhhh-----------HHHHHHHHHH
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-----------------PSGEVVAVKKFHSLLLSEI-----------SVQREFLNEI 452 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-----------------~~~~~vavK~~~~~~~~~~-----------~~~~~~~~e~ 452 (673)
.++|++.++||+|+||+||+|.. ..++.||||++........ ...+....|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 46899999999999999999953 2457899999864321110 0112344577
Q ss_pred HHHhccCCCcc-----cceeeeeec--------CCeeeEEEecccCCChHHHHhcCCC---------------------C
Q 005864 453 KALTEIRHRNI-----VKFYGFCSH--------PRHSFLVYECLERGSLAEILSNDGS---------------------I 498 (673)
Q Consensus 453 ~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~---------------------~ 498 (673)
.++.+++|.++ ++++++|.. .+..++||||+++|+|.++++.... .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77888876554 677888753 3567999999999999999974311 1
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC-ceeccccccccccc
Q 005864 499 KEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN-WTEFAGTFGYVAPE 577 (673)
Q Consensus 499 ~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE 577 (673)
..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++..+...... .....+++.|+|||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 2346788899999999999999999 9999999999999999999999999999765433221 11233478999999
Q ss_pred ccccCC----------------------cCcchhHHHHHHHHHHHHhCCC-CCcccccccccccc---cccccccccCCC
Q 005864 578 LAYTMK----------------------VTEKCDVYSFGVLALEVIKGKH-PRDFISLLSSSSSN---MNLSLNEILDPR 631 (673)
Q Consensus 578 ~~~~~~----------------------~~~~~Dv~slG~il~el~~g~~-p~~~~~~~~~~~~~---~~~~~~~~~~~~ 631 (673)
.+.... ...+.||||+||+++||++|.. ||............ ....+.......
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~ 460 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQK 460 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccC
Confidence 875322 1234799999999999999886 66533221111000 001111111112
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCC---CCCCCHHHHHH
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESP---ESRPTMQTVCQ 669 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp---~~Rps~~~v~~ 669 (673)
...+ .+........+++.+++..+| .+|+|++|+++
T Consensus 461 ~~~~--~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 461 YDFS--LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred CCcc--cccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 2111 223344568889999999866 68999999985
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-32 Score=248.89 Aligned_cols=259 Identities=23% Similarity=0.345 Sum_probs=196.4
Q ss_pred CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC-----eee
Q 005864 404 FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR-----HSF 477 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 477 (673)
.+..+.||-|+||.||.+.++ +|+.||.|++.... ......+.+.+|++++..++|.|++..++...-.. +.|
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf-q~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY 133 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF-QNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY 133 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHH-HHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence 344588999999999999764 89999999986543 33345678889999999999999999988775432 468
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+++|.|.. +|+.++-.. ..++-..++-...||++||.|||+. +|.||||||.|.+++.+...||||||+++..
T Consensus 134 V~TELmQS-DLHKIIVSP---Q~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARve 206 (449)
T KOG0664|consen 134 VLTELMQS-DLHKIIVSP---QALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTW 206 (449)
T ss_pred HHHHHHHh-hhhheeccC---CCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEeccccccccc
Confidence 89999876 888888765 3477788888999999999999999 9999999999999999999999999999977
Q ss_pred CCCCC-CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccc---------------cc
Q 005864 558 KPGSS-NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS---------------NM 620 (673)
Q Consensus 558 ~~~~~-~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~---------------~~ 620 (673)
+.+.. ..+..+.|..|+|||.+++. .|+.+.||||.|||+.|++.++.-|.-.++.+...- ..
T Consensus 207 e~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~AC 286 (449)
T KOG0664|consen 207 DQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYAC 286 (449)
T ss_pred chhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHh
Confidence 55433 34556678999999999875 589999999999999999998888865444322110 01
Q ss_pred ccccccccCCCCCCCCc-------chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 621 NLSLNEILDPRLPLPSR-------NIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 621 ~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
+.....++......|.. ...+.-.+...+...++..||.+|.+..+.+..
T Consensus 287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 11112222222221110 111223346678889999999999998887653
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=236.34 Aligned_cols=252 Identities=21% Similarity=0.330 Sum_probs=191.3
Q ss_pred cCCCccceeccCCcEEEEEEE-eCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecC--Ceee
Q 005864 402 KNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHP--RHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~ 477 (673)
++|++++.+|+|.+++||.|. ..+.++++||+++.. ..+.+.+|+.+|..++ ||||+++++...++ ..+.
T Consensus 38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV------kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sktpa 111 (338)
T KOG0668|consen 38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV------KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPS 111 (338)
T ss_pred chHHHHHHHcCccHhhHhcccccCCCceEEEeeechH------HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCch
Confidence 578889999999999999994 567899999998764 2567889999999996 99999999999765 4678
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-CceEEecccceee
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFGIAKF 556 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~~~~ 556 (673)
+|+||+.+.+...+-. .++...+...+.+++.||.|+|+. ||.|||+||.|+++|.. ...+++|+|+|.+
T Consensus 112 LiFE~v~n~Dfk~ly~------tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEF 182 (338)
T KOG0668|consen 112 LIFEYVNNTDFKQLYP------TLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 182 (338)
T ss_pred hHhhhhccccHHHHhh------hhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhh
Confidence 9999999987776543 356677788999999999999999 99999999999999865 5699999999999
Q ss_pred cCCCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccc-ccc------------------
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLL-SSS------------------ 616 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~------------------ 616 (673)
+.++.. ..-.+.+..|--||.+... .|+..-|+|||||++.+|+..+.||-..... ++.
T Consensus 183 YHp~~e-YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~K 261 (338)
T KOG0668|consen 183 YHPGKE-YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNK 261 (338)
T ss_pred cCCCce-eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHH
Confidence 876544 3445567788999988764 4788999999999999999999997421110 000
Q ss_pred -ccccccccccccCCCCCCCC------cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 617 -SSNMNLSLNEILDPRLPLPS------RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 617 -~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.-........++......+. +...-...+..+++.+.+..|-++|||++|.++
T Consensus 262 Y~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 262 YQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 00000111111111111110 000112356889999999999999999999874
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.4e-31 Score=231.39 Aligned_cols=206 Identities=23% Similarity=0.345 Sum_probs=166.9
Q ss_pred HHHHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCC
Q 005864 397 IIRATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPR 474 (673)
Q Consensus 397 ~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 474 (673)
+....+.......||+|++|.|-+.++ .+|+..|+|++..... .+..++...|+.+..+. .+|++|+++|......
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn--~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg 118 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN--SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG 118 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC--hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc
Confidence 333444555567799999999988876 4799999999976533 33467777888876665 7999999999999999
Q ss_pred eeeEEEecccCCChHHHHhcC-CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccc
Q 005864 475 HSFLVYECLERGSLAEILSND-GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGI 553 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 553 (673)
..++.||.|+- ||..+-++- ......++...-+||..+.+||.|||++. .++|||+||+|||++.+|+||+||||.
T Consensus 119 dvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGI 195 (282)
T KOG0984|consen 119 DVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGI 195 (282)
T ss_pred cEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEccccc
Confidence 99999999976 887665432 22356788889999999999999999985 899999999999999999999999999
Q ss_pred eeecCCCCCCceecccccccccccccc----cCCcCcchhHHHHHHHHHHHHhCCCCCc
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAY----TMKVTEKCDVYSFGVLALEVIKGKHPRD 608 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~----~~~~~~~~Dv~slG~il~el~~g~~p~~ 608 (673)
+..+...-. .+.-.|-..|||||.+. ...|+-||||||+|+.+.||.+++.||+
T Consensus 196 sG~L~dSiA-kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~ 253 (282)
T KOG0984|consen 196 SGYLVDSIA-KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYE 253 (282)
T ss_pred ceeehhhhH-HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccc
Confidence 987643211 12234567899999875 3468999999999999999999999987
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=261.68 Aligned_cols=201 Identities=22% Similarity=0.339 Sum_probs=175.1
Q ss_pred CCCccceeccCCcEEEEEEE-eCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
-|-..+.||-|+||+|.+++ ..+...||.|.+.+...-........+.|-++|..-+.+-||+++-.|.+.+.+|+|||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 46667789999999999995 44577899999987766666677889999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC---
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK--- 558 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~--- 558 (673)
|++||++.++|-+-+ .|.+..+..++..+..|+++.|.. |+|||||||.|||||.||.+||.|||++.-+.
T Consensus 710 YIPGGDmMSLLIrmg---IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRMG---IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred ccCCccHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceecc
Confidence 999999999997753 588888899999999999999999 99999999999999999999999999986321
Q ss_pred ------CCCC---------------------------------CceecccccccccccccccCCcCcchhHHHHHHHHHH
Q 005864 559 ------PGSS---------------------------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALE 599 (673)
Q Consensus 559 ------~~~~---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e 599 (673)
.++. .....+||+.|+|||++....++.-+|.||.||||||
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence 1100 0012458999999999999999999999999999999
Q ss_pred HHhCCCCCcc
Q 005864 600 VIKGKHPRDF 609 (673)
Q Consensus 600 l~~g~~p~~~ 609 (673)
|+.|+.||-.
T Consensus 864 m~~g~~pf~~ 873 (1034)
T KOG0608|consen 864 MLVGQPPFLA 873 (1034)
T ss_pred HhhCCCCccC
Confidence 9999999864
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-30 Score=252.18 Aligned_cols=132 Identities=24% Similarity=0.451 Sum_probs=112.8
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-----C---Ccccceeeeeec
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-----H---RNIVKFYGFCSH 472 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~l~~~~~~ 472 (673)
.+|.+.+.||.|.|++||++.+ ...+.||+|+.+.. ....+....||.+|++++ | .+||+++++|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA----qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh 153 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA----QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH 153 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh----hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence 5788999999999999999955 46788999998764 334567788999999994 2 489999999964
Q ss_pred ----CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeC
Q 005864 473 ----PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS 541 (673)
Q Consensus 473 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~ 541 (673)
+.++++|+|++ |.+|..+|.... .+.++...+.+|++||+.||.|||..| +|+|-||||+|||+.
T Consensus 154 sGpNG~HVCMVfEvL-GdnLLklI~~s~-YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 154 SGPNGQHVCMVFEVL-GDNLLKLIKYSN-YRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred cCCCCcEEEEEehhh-hhHHHHHHHHhC-CCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 56889999988 459999998764 356889999999999999999999998 999999999999994
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=237.06 Aligned_cols=212 Identities=32% Similarity=0.540 Sum_probs=185.4
Q ss_pred eccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCCh
Q 005864 410 IGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSL 488 (673)
Q Consensus 410 ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 488 (673)
||+|.+|.||++...+ |+.+++|++....... ..+.+.+|+..++.++|++++++++++......++++||+++++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 6899999999998754 8999999987653221 357799999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-CCceEEecccceeecCCCCCCceec
Q 005864 489 AEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-EYEARVSDFGIAKFLKPGSSNWTEF 567 (673)
Q Consensus 489 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~~~~~~~~~~~ 567 (673)
.+++.... ..+++..+..++.++++++++||+. +++|+||+|.||+++. ++.++++|||.+.............
T Consensus 79 ~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 153 (215)
T cd00180 79 KDLLKENE--GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTI 153 (215)
T ss_pred HHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcc
Confidence 99998653 3578899999999999999999999 9999999999999999 8999999999998765443223445
Q ss_pred ccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHH
Q 005864 568 AGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISI 646 (673)
Q Consensus 568 ~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 646 (673)
.+...|++||..... .++.++|+|++|++++++ ..+
T Consensus 154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------~~~ 190 (215)
T cd00180 154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------PEL 190 (215)
T ss_pred cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------HHH
Confidence 678899999998877 788999999999999999 358
Q ss_pred HHHHHHcccCCCCCCCCHHHHHHHh
Q 005864 647 LEVALLCLEESPESRPTMQTVCQLL 671 (673)
Q Consensus 647 ~~li~~cl~~dp~~Rps~~~v~~~L 671 (673)
.+++.+|++.+|++||++.++++.+
T Consensus 191 ~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 191 KDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHHHHhhCCcccCcCHHHHhhCC
Confidence 8999999999999999999998753
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-30 Score=258.56 Aligned_cols=210 Identities=24% Similarity=0.325 Sum_probs=178.9
Q ss_pred cccHHHHHHHhcCCCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHH-----HHHHHHHHHhccC---CC
Q 005864 391 KIVYEEIIRATKNFDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQR-----EFLNEIKALTEIR---HR 461 (673)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~-----~~~~e~~~l~~l~---h~ 461 (673)
.+..+........|...+.+|.|+||.|+.|.++. ...|+||.+.+...-...+.+ ...-|+++|..++ |+
T Consensus 550 ~~~~e~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~ 629 (772)
T KOG1152|consen 550 NIGCEKEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHE 629 (772)
T ss_pred cccceeeecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCcc
Confidence 33344444445678999999999999999998764 667999988776544333333 2667999999997 99
Q ss_pred cccceeeeeecCCeeeEEEecc-cCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe
Q 005864 462 NIVKFYGFCSHPRHSFLVYECL-ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL 540 (673)
Q Consensus 462 niv~l~~~~~~~~~~~lv~e~~-~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 540 (673)
||++++++|++++.+|++||-. ++.+|.+++... ..+++.++.-|++||+.|+++||+. +|||||||-+||.+
T Consensus 630 NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~k---p~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenviv 703 (772)
T KOG1152|consen 630 NILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFK---PRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIV 703 (772)
T ss_pred chhhhhheeecCCeeEEEecCCCCCcchhhhhhcc---CccchHHHHHHHHHHHhcccccccc---CceecccccccEEE
Confidence 9999999999999999999976 456999999876 4588899999999999999999999 99999999999999
Q ss_pred CCCCceEEecccceeecCCCCCCceecccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCc
Q 005864 541 SSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRD 608 (673)
Q Consensus 541 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~ 608 (673)
+.+|-+|++|||.+..... .....+.||.+|.|||++.+.+| +..-|||++|+++|-++....||.
T Consensus 704 d~~g~~klidfgsaa~~ks--gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 704 DSNGFVKLIDFGSAAYTKS--GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ecCCeEEEeeccchhhhcC--CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9999999999999987653 34566889999999999998887 567899999999999999999976
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-30 Score=234.40 Aligned_cols=252 Identities=21% Similarity=0.312 Sum_probs=190.2
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeee-eecCCeee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGF-CSHPRHSF 477 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~-~~~~~~~~ 477 (673)
.+.|++.+.+|+|.||.+-.++++ +.+.+++|.++.+... .++|.+|...--.+ .|.||+.-++. |+..+.+.
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt----~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTT----QADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhh----HHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 456889999999999999999876 5788999998876443 67888888776666 58999987754 67778888
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe-CC-CCceEEeccccee
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL-SS-EYEARVSDFGIAK 555 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill-~~-~~~~kl~Dfg~~~ 555 (673)
.++||++.|+|.+-+...+ +-+....+++.|++.|+.|||++ ++||||||.+|||+ +. ..++|+||||..+
T Consensus 99 F~qE~aP~gdL~snv~~~G----igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~ 171 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAAG----IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTR 171 (378)
T ss_pred EeeccCccchhhhhcCccc----ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeeccccc
Confidence 9999999999999887754 66677889999999999999999 99999999999999 33 3579999999998
Q ss_pred ecCCCCCCceecccccccccccccccC-----CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC
Q 005864 556 FLKPGSSNWTEFAGTFGYVAPELAYTM-----KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP 630 (673)
Q Consensus 556 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 630 (673)
..... .....-+-.|.|||..... ...+.+|+|.||+++|.++||..||......+.. .-....+.....+
T Consensus 172 k~g~t---V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~-Y~~~~~w~~rk~~ 247 (378)
T KOG1345|consen 172 KVGTT---VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKP-YWEWEQWLKRKNP 247 (378)
T ss_pred ccCce---ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCch-HHHHHHHhcccCc
Confidence 54322 2223345679999976532 3567899999999999999999999832222111 1111222333333
Q ss_pred CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 631 RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 631 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
+.+ ......++.+.++.++-+.++|++|-...++.++
T Consensus 248 ~~P---~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 248 ALP---KKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred cCc---hhhcccCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence 333 3334455668889999999999999666665544
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=237.29 Aligned_cols=256 Identities=21% Similarity=0.298 Sum_probs=196.2
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC------C
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP------R 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 474 (673)
.+|.....+|.|.- .|..|-+ -.+++||+|+...+... ....++..+|...+..+.|+|+++++.++.-. .
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n-~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQN-QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCcccc-CccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 45666788999988 6666633 36899999998777433 44567778999999999999999999999643 3
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..|+|||+|.. +|...+.- +++-.+...|..|++.|++|||+. +|+||||||+||++..+..+||.|||+|
T Consensus 95 e~y~v~e~m~~-nl~~vi~~-----elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 95 EVYLVMELMDA-NLCQVILM-----ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred hHHHHHHhhhh-HHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhh
Confidence 56999999976 89988873 366788889999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccc-------------
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN------------- 621 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~------------- 621 (673)
+..... -..+..+.+..|.|||++.+..+.+.+||||.||++.||++|+.-|.+....+++....+
T Consensus 166 r~e~~~-~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL 244 (369)
T KOG0665|consen 166 RTEDTD-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQL 244 (369)
T ss_pred cccCcc-cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHh
Confidence 875544 245667889999999999999999999999999999999999988865444332211100
Q ss_pred ----------------ccccc-ccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 622 ----------------LSLNE-ILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 622 ----------------~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+ +-|..++...+...-....+.+++.+||..||++|-+++++++
T Consensus 245 ~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 245 QPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred hHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 00000 0011111111111122335788999999999999999999875
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-31 Score=268.39 Aligned_cols=289 Identities=29% Similarity=0.436 Sum_probs=172.1
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCcccc-CCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSG-SVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI 80 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~ 80 (673)
|+++ .+-+.++.|+.|+.+.+..|+++. =+|..+-++..|+.||||.|++. ..|..+..-+++-.|+|++|+|..++
T Consensus 65 N~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIP 142 (1255)
T KOG0444|consen 65 NQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIP 142 (1255)
T ss_pred hhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCC
Confidence 4444 344555555555555555555542 23445555566666666666665 55555555566666666666666666
Q ss_pred ccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCc-------------------------cCChhhhcc
Q 005864 81 SEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITG-------------------------SIPPEIGKL 135 (673)
Q Consensus 81 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~-------------------------~~~~~l~~l 135 (673)
...|.++..|-+||||+|++. ..|.....+..|++|.|++|.+.. -+|..+..+
T Consensus 143 n~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l 221 (1255)
T KOG0444|consen 143 NSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDL 221 (1255)
T ss_pred chHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhh
Confidence 666666666666666666655 233334444455555555554321 245555555
Q ss_pred ccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEc
Q 005864 136 YQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNL 215 (673)
Q Consensus 136 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l 215 (673)
.+|..+|||.|.+. ..|..+..+++|+.|+|++|+|+ .+.-....-.+|++|+||.|+++ .+|.++.++++|+.|++
T Consensus 222 ~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~ 298 (1255)
T KOG0444|consen 222 HNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYA 298 (1255)
T ss_pred hhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHh
Confidence 66666666666665 56666666666666666666666 33323334456666666666666 66666666666666666
Q ss_pred cCCcCcc-CCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccC
Q 005864 216 SNNQFRK-EFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLG 294 (673)
Q Consensus 216 ~~n~l~~-~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~ 294 (673)
.+|+++- -+|..++.+.+|+.+..++|.+. ..|+.++.+..|+.|.|+.|++.+. |+++.-++.|+.||+..|+-.-
T Consensus 299 n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLiTL-PeaIHlL~~l~vLDlreNpnLV 376 (1255)
T KOG0444|consen 299 NNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLITL-PEAIHLLPDLKVLDLRENPNLV 376 (1255)
T ss_pred ccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhcccccceeec-hhhhhhcCCcceeeccCCcCcc
Confidence 6666653 25666666666666666666665 6666677777777777777766543 6666666777777777776655
Q ss_pred CCCC
Q 005864 295 LIPN 298 (673)
Q Consensus 295 ~~~~ 298 (673)
.+|.
T Consensus 377 MPPK 380 (1255)
T KOG0444|consen 377 MPPK 380 (1255)
T ss_pred CCCC
Confidence 5554
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-30 Score=260.59 Aligned_cols=252 Identities=25% Similarity=0.371 Sum_probs=203.9
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|+...++|.|.||.||||++. +++..|+|.++-.... ..+-..+|+-+++..+|||||.++|.+-..+..++.
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d---d~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD---DFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCc---cccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 357889999999999999999764 7999999998765433 366778899999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
||||.+|+|.+.-+-.+ ++++.++..+++...+|++|||+. +-+|||||-.||++++.|.+|++|||.+..+..
T Consensus 91 MEycgggslQdiy~~Tg---plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITA 164 (829)
T ss_pred EEecCCCcccceeeecc---cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhh
Confidence 99999999999877654 588889999999999999999999 889999999999999999999999999987766
Q ss_pred CCCCceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC-CCCCCC
Q 005864 560 GSSNWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD-PRLPLP 635 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 635 (673)
.-.....+.||+.|||||+.. .+.|..++|||+.|+...|+-.-+.|.-.....+... .......+ +++.
T Consensus 165 ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~----LmTkS~~qpp~lk-- 238 (829)
T KOG0576|consen 165 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALF----LMTKSGFQPPTLK-- 238 (829)
T ss_pred hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHH----HhhccCCCCCccc--
Confidence 656667889999999999763 5678999999999999999988888733222221100 00001111 1111
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.-......+-++++.|+-++|++||+++.+++
T Consensus 239 --Dk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 239 --DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred --CCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 11223445888999999999999999987653
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-29 Score=248.58 Aligned_cols=268 Identities=19% Similarity=0.206 Sum_probs=205.5
Q ss_pred ccHHHHHHHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC------CCccc
Q 005864 392 IVYEEIIRATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR------HRNIV 464 (673)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv 464 (673)
+.+.--+.....|.+....|+|-|++|.+|.+. -|..||||++...... .+.=..|+++|.++. --|.+
T Consensus 422 Yrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M----~KtGl~EleiLkKL~~AD~Edk~Hcl 497 (752)
T KOG0670|consen 422 YRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM----HKTGLKELEILKKLNDADPEDKFHCL 497 (752)
T ss_pred EEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH----hhhhhHHHHHHHHhhccCchhhhHHH
Confidence 333333345578999999999999999999764 4889999999765333 345567999999995 34899
Q ss_pred ceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC
Q 005864 465 KFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY 544 (673)
Q Consensus 465 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 544 (673)
+++..|...+++|+|||-+.- +|.++++..+....+....+..+++|+.-||..|-.. +|+|.||||.|||+++..
T Consensus 498 rl~r~F~hknHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k 573 (752)
T KOG0670|consen 498 RLFRHFKHKNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESK 573 (752)
T ss_pred HHHHHhhhcceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCc
Confidence 999999999999999998765 9999999988878899999999999999999999998 999999999999999864
Q ss_pred -ceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccc-------ccc
Q 005864 545 -EARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLL-------SSS 616 (673)
Q Consensus 545 -~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-------~~~ 616 (673)
.+||||||.|...... ..+....+..|.|||++.+.+|+...|+||.||.|||+.||+.-|.+.... +..
T Consensus 574 ~iLKLCDfGSA~~~~en--eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~K 651 (752)
T KOG0670|consen 574 NILKLCDFGSASFASEN--EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELK 651 (752)
T ss_pred ceeeeccCccccccccc--cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhc
Confidence 5899999999876432 234445567899999999999999999999999999999999887532110 000
Q ss_pred ccc----------c-------------------ccc---cccccCC------CCC---CCCcchHHHHHHHHHHHHHccc
Q 005864 617 SSN----------M-------------------NLS---LNEILDP------RLP---LPSRNIQDKLISILEVALLCLE 655 (673)
Q Consensus 617 ~~~----------~-------------------~~~---~~~~~~~------~~~---~~~~~~~~~~~~l~~li~~cl~ 655 (673)
+.. . +.. +-..+.| .+. -.+........++.+|+..|+.
T Consensus 652 Gk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~ 731 (752)
T KOG0670|consen 652 GKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLI 731 (752)
T ss_pred CCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhc
Confidence 000 0 000 0000011 000 0122334456779999999999
Q ss_pred CCCCCCCCHHHHHH
Q 005864 656 ESPESRPTMQTVCQ 669 (673)
Q Consensus 656 ~dp~~Rps~~~v~~ 669 (673)
.||++|-|..|.++
T Consensus 732 LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 732 LDPEKRITVNQALK 745 (752)
T ss_pred cChhhcCCHHHHhc
Confidence 99999999999875
|
|
| >KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-30 Score=262.05 Aligned_cols=276 Identities=27% Similarity=0.338 Sum_probs=231.4
Q ss_pred ccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccC
Q 005864 6 GAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFG 85 (673)
Q Consensus 6 ~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~ 85 (673)
.-+|..+-.|..|+.||||.|+++ ..|..+.+-+++-+|+||+|+|..+...-|.+++.|-.|+|++|++..++| ...
T Consensus 93 sGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LPP-Q~R 170 (1255)
T KOG0444|consen 93 SGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLPP-QIR 170 (1255)
T ss_pred CCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhcCH-HHH
Confidence 347888889999999999999999 788888888999999999999985555567788888888898888885544 456
Q ss_pred CCCCccEEEccCCccc-------------------------cccccCccccCCCcEEEcccCccCccCChhhhccccccc
Q 005864 86 IYPNLTFLDISHNNFY-------------------------GEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHK 140 (673)
Q Consensus 86 ~l~~L~~L~L~~n~i~-------------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 140 (673)
.+.+|++|+|++|.+. .-.|.++..+.+|..++|+.|.+. ..|+++.++.+|+.
T Consensus 171 RL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~Lrr 249 (1255)
T KOG0444|consen 171 RLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRR 249 (1255)
T ss_pred HHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhhe
Confidence 6667777777776642 123455667788999999999999 89999999999999
Q ss_pred cccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCC-cCCccccccccccEEEccCCc
Q 005864 141 LDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSG-SIPETLGNLLKVHYLNLSNNQ 219 (673)
Q Consensus 141 L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~-~~~~~l~~l~~L~~L~l~~n~ 219 (673)
|+||+|+|+ .+........+|++|+|++|+++ .+|+++++++.|+.|.+.+|+++- -+|..++++.+|+.+..++|.
T Consensus 250 LNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~ 327 (1255)
T KOG0444|consen 250 LNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNK 327 (1255)
T ss_pred eccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccc
Confidence 999999998 55556667789999999999999 899999999999999999999863 479999999999999999999
Q ss_pred CccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEcc
Q 005864 220 FRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDIS 288 (673)
Q Consensus 220 l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~ 288 (673)
+. ..|..++.+..|+.|.|+.|++. .+|+++.-++.|+.||+..|.---.+|+.-..-..|..-++.
T Consensus 328 LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPKP~da~~~lefYNID 394 (1255)
T KOG0444|consen 328 LE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPKPNDARKKLEFYNID 394 (1255)
T ss_pred cc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCCcchhhhcceeeecc
Confidence 98 79999999999999999999998 899999999999999999997655555443333455555444
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-27 Score=229.78 Aligned_cols=199 Identities=32% Similarity=0.510 Sum_probs=172.6
Q ss_pred CCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
|+..+.||+|++|+||+|.... ++.+|+|.+...... ...+.+.+|++.+.+++|+|++++++++......++++||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 5677899999999999998765 899999998764332 2467889999999999999999999999998999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC-
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS- 561 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~- 561 (673)
+++++|.+++..... .+++.....++.+++.++.+||+. +++|+|++|.||+++.++.++++|||.+.......
T Consensus 79 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 79 CEGGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA 153 (225)
T ss_pred cCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence 999999999987542 178899999999999999999999 99999999999999999999999999998775432
Q ss_pred CCceeccccccccccccc-ccCCcCcchhHHHHHHHHHHHHhCCCCCcc
Q 005864 562 SNWTEFAGTFGYVAPELA-YTMKVTEKCDVYSFGVLALEVIKGKHPRDF 609 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~il~el~~g~~p~~~ 609 (673)
.......++..|++||.. ....++.++|||+||++++||++|+.||+.
T Consensus 154 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 122334577889999998 666788899999999999999999999863
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-29 Score=244.04 Aligned_cols=306 Identities=32% Similarity=0.467 Sum_probs=189.5
Q ss_pred CCCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccc
Q 005864 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI 80 (673)
Q Consensus 1 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~ 80 (673)
||+++ .+|+.+..+.++..|++++|.+. ..+.+++.+-.|..|+..+|+++ ..|.++.++.+|..|++.+|++...+
T Consensus 100 ~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~ 176 (565)
T KOG0472|consen 100 HNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALP 176 (565)
T ss_pred cchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCC
Confidence 45566 66777777777777777777777 55666777777777777777776 55666666666666666666666555
Q ss_pred ccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCc---------------------cCCh-hhhccccc
Q 005864 81 SEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITG---------------------SIPP-EIGKLYQL 138 (673)
Q Consensus 81 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~---------------------~~~~-~l~~l~~L 138 (673)
+.... ++.|++||..+|-+. ..|..++.+.+|..|+|..|+|.. .+|. ...++++|
T Consensus 177 ~~~i~-m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~lPef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l 254 (565)
T KOG0472|consen 177 ENHIA-MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIRFLPEFPGCSLLKELHVGENQIEMLPAEHLKHLNSL 254 (565)
T ss_pred HHHHH-HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccccCCCCCccHHHHHHHhcccHHHhhHHHHhcccccc
Confidence 44444 555555555555554 334444555555555555555441 2222 23355566
Q ss_pred cccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCC--------------------
Q 005864 139 HKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSG-------------------- 198 (673)
Q Consensus 139 ~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~-------------------- 198 (673)
..|||++|+++ ..|..++-+.+|.+||+++|.|+ .+|..++++ +|+.|.+.+|.+..
T Consensus 255 ~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~ 331 (565)
T KOG0472|consen 255 LVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSK 331 (565)
T ss_pred eeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHh
Confidence 66666666665 55666666666666666666666 444455555 55555555554420
Q ss_pred --------------------------------------------cCCcccccccc---ccEEEccCCcCc----------
Q 005864 199 --------------------------------------------SIPETLGNLLK---VHYLNLSNNQFR---------- 221 (673)
Q Consensus 199 --------------------------------------------~~~~~l~~l~~---L~~L~l~~n~l~---------- 221 (673)
.+|+....... .+.++++.|++.
T Consensus 332 ~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lk 411 (565)
T KOG0472|consen 332 IKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELK 411 (565)
T ss_pred hccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHH
Confidence 00000000000 233444444432
Q ss_pred -------------cCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCcccc-------------------
Q 005864 222 -------------KEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLS------------------- 269 (673)
Q Consensus 222 -------------~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~------------------- 269 (673)
+.+|..++.+++|.-|+|++|.+. .+|..++.+..|+.||++.|++.
T Consensus 412 elvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~ 490 (565)
T KOG0472|consen 412 ELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFRMLPECLYELQTLETLLASN 490 (565)
T ss_pred HHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccccchHHHhhHHHHHHHHhcc
Confidence 234556667778888888888887 77888888888888888877754
Q ss_pred ----ccCccccccCCCccEEEccCccccCCCCCCcccccCccccccCCcC
Q 005864 270 ----GLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRG 315 (673)
Q Consensus 270 ----~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~ 315 (673)
.+.+..+.+|.+|.+|||.+|.+...+|............+.|||.
T Consensus 491 nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpf 540 (565)
T KOG0472|consen 491 NQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPF 540 (565)
T ss_pred ccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCcc
Confidence 3344457888999999999999999988887777777777788763
|
|
| >KOG0472 consensus Leucine-rich repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-29 Score=240.74 Aligned_cols=270 Identities=29% Similarity=0.435 Sum_probs=165.6
Q ss_pred CCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEE
Q 005864 15 FTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLD 94 (673)
Q Consensus 15 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 94 (673)
++.|++|+...|.++ .+|..++.+.+|.-|+|..|.|. ..| .|.+|..|.+|++..|+|..++++...++++|..||
T Consensus 182 m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLD 258 (565)
T KOG0472|consen 182 MKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLD 258 (565)
T ss_pred HHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeee
Confidence 555555555555555 45556666666666666666665 445 566666666666666666666666667777777777
Q ss_pred ccCCccccccccCccccCCCcEEEcccCccCccCChhhhcccccccccccccccccc-----------------------
Q 005864 95 ISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGE----------------------- 151 (673)
Q Consensus 95 L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~----------------------- 151 (673)
|.+|+++ ..|+.+..+.+|..|++++|.|+ ..|..++++ +|+.|-+.+|.+..+
T Consensus 259 LRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~d 335 (565)
T KOG0472|consen 259 LRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDD 335 (565)
T ss_pred ccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccC
Confidence 7777776 45666677777777777777777 466677777 777777777765210
Q ss_pred --------------CCcc-c---cCCCC--------------------------CCEEEccCcccc--------------
Q 005864 152 --------------IPIE-L---GNLKS--------------------------LNYLVLNGNKLS-------------- 173 (673)
Q Consensus 152 --------------~~~~-l---~~l~~--------------------------L~~L~L~~n~l~-------------- 173 (673)
.+.. + ..+.+ ++..++++|++.
T Consensus 336 glS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelvT 415 (565)
T KOG0472|consen 336 GLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELVT 415 (565)
T ss_pred CCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHHH
Confidence 0000 0 00011 233444444443
Q ss_pred ---------ccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcC
Q 005864 174 ---------GNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFL 244 (673)
Q Consensus 174 ---------~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l 244 (673)
+.+|..++.+++|+.|+|++|.+. .+|..++.+-.|+.|+++.|++. ..|..+-.+..|+.+-.++|++
T Consensus 416 ~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi 493 (565)
T KOG0472|consen 416 DLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQI 493 (565)
T ss_pred HHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccc
Confidence 122223334444445555544444 34444444444555555555444 3444444444444444445555
Q ss_pred CCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCcccc
Q 005864 245 GGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELL 293 (673)
Q Consensus 245 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~ 293 (673)
....+..+.+|.+|..|||.+|.+.. +|..+++|.+|++|+++||+|.
T Consensus 494 ~~vd~~~l~nm~nL~tLDL~nNdlq~-IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 494 GSVDPSGLKNMRNLTTLDLQNNDLQQ-IPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cccChHHhhhhhhcceeccCCCchhh-CChhhccccceeEEEecCCccC
Confidence 54455558899999999999999984 5778999999999999999998
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8e-27 Score=226.97 Aligned_cols=198 Identities=25% Similarity=0.367 Sum_probs=164.3
Q ss_pred HHHHhcCCCccceeccCCcEEEEEEEeC----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeee
Q 005864 397 IIRATKNFDAEQCIGIGGQASVYRGELP----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCS 471 (673)
Q Consensus 397 ~~~~~~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 471 (673)
+....+.|..++.||.|.|++||+|.+. .++.||+|.+.... ...++..|+++|..+ .+.||+++.+++.
T Consensus 31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-----~p~ri~~El~~L~~~gG~~ni~~~~~~~r 105 (418)
T KOG1167|consen 31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-----SPSRILNELEMLYRLGGSDNIIKLNGCFR 105 (418)
T ss_pred hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-----CchHHHHHHHHHHHhccchhhhcchhhhc
Confidence 3444577999999999999999999542 47789999885432 245688999999999 5999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-CceEEec
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSD 550 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~D 550 (673)
..+...+|+||++.....++... ++..++..++..+..||+++|.+ |||||||||+|++.+.. +.-.|+|
T Consensus 106 nnd~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvD 176 (418)
T KOG1167|consen 106 NNDQVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVD 176 (418)
T ss_pred cCCeeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEe
Confidence 99999999999999999998764 56778888999999999999999 99999999999999754 6789999
Q ss_pred ccceeecCCCC--------------C------------------------------Cceeccccccccccccccc-CCcC
Q 005864 551 FGIAKFLKPGS--------------S------------------------------NWTEFAGTFGYVAPELAYT-MKVT 585 (673)
Q Consensus 551 fg~~~~~~~~~--------------~------------------------------~~~~~~~~~~y~aPE~~~~-~~~~ 585 (673)
||+|...+... . .....+||+||+|||++.. ...+
T Consensus 177 FgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qt 256 (418)
T KOG1167|consen 177 FGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQT 256 (418)
T ss_pred chhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcC
Confidence 99997221000 0 0012459999999998864 4578
Q ss_pred cchhHHHHHHHHHHHHhCCCCCc
Q 005864 586 EKCDVYSFGVLALEVIKGKHPRD 608 (673)
Q Consensus 586 ~~~Dv~slG~il~el~~g~~p~~ 608 (673)
+++||||.|||+.-+++++.||-
T Consensus 257 taiDiws~GVI~Lslls~~~PFf 279 (418)
T KOG1167|consen 257 TAIDIWSAGVILLSLLSRRYPFF 279 (418)
T ss_pred Cccceeeccceeehhhccccccc
Confidence 89999999999999999999973
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=209.97 Aligned_cols=165 Identities=23% Similarity=0.240 Sum_probs=125.1
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
|||.++++..+ ..+++.+++.|+.|++.||+|||+. + ||+||+++.++.+|+ ||.+.......
T Consensus 1 GsL~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~---- 63 (176)
T smart00750 1 VSLADILEVRG--RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ---- 63 (176)
T ss_pred CcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc----
Confidence 68999998643 4589999999999999999999998 5 999999999999999 99998764322
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHH-
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLI- 644 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 644 (673)
..|++.|+|||++.+..++.++|||||||++|||++|+.||........... ... .......+...........
T Consensus 64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~ 138 (176)
T smart00750 64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILE---ILL-NGMPADDPRDRSNLESVSAA 138 (176)
T ss_pred -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHH---HHH-HHhccCCccccccHHHHHhh
Confidence 2578999999999999999999999999999999999999864322111000 000 0001111100011122222
Q ss_pred -HHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 645 -SILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 645 -~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
++.+++.+||+.+|.+||++.|+++.+.
T Consensus 139 ~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~ 167 (176)
T smart00750 139 RSFADFMRVCASRLPQRREAANHYLAHCR 167 (176)
T ss_pred hhHHHHHHHHHhcccccccCHHHHHHHHH
Confidence 5899999999999999999999998763
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-26 Score=265.50 Aligned_cols=194 Identities=20% Similarity=0.228 Sum_probs=139.9
Q ss_pred ccCC-Ccccceeeee-------ecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 005864 457 EIRH-RNIVKFYGFC-------SHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPI 528 (673)
Q Consensus 457 ~l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 528 (673)
.++| +||++++++| ...+..+.++||+ +++|.+++.... ..+++.++..++.||++||+|||++ +|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---gI 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAHSQ---GI 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 3455 6888888887 2334567888987 459999997543 4589999999999999999999999 99
Q ss_pred EEecCCCCCeEeCC-------------------CCceEEecccceeecCCCC----------------CCceeccccccc
Q 005864 529 VHRDISSKNVLLSS-------------------EYEARVSDFGIAKFLKPGS----------------SNWTEFAGTFGY 573 (673)
Q Consensus 529 vH~dlk~~Nill~~-------------------~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~~~~~y 573 (673)
+||||||+|||++. ++.+|++|||+++...... .......||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999954 4456677777765421100 000123578889
Q ss_pred ccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHc
Q 005864 574 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLC 653 (673)
Q Consensus 574 ~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 653 (673)
||||++.+..++.++|||||||++|||++|..|+...... ..........+. ..........++.+|
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~------~~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 248 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRT------MSSLRHRVLPPQ-------ILLNWPKEASFCLWL 248 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHH------HHHHHHhhcChh-------hhhcCHHHHHHHHHh
Confidence 9999999999999999999999999999999886522110 000000111111 011123456788899
Q ss_pred ccCCCCCCCCHHHHHH
Q 005864 654 LEESPESRPTMQTVCQ 669 (673)
Q Consensus 654 l~~dp~~Rps~~~v~~ 669 (673)
|+++|.+||++.|+++
T Consensus 249 L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 249 LHPEPSCRPSMSELLQ 264 (793)
T ss_pred CCCChhhCcChHHHhh
Confidence 9999999999999985
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.7e-26 Score=207.87 Aligned_cols=248 Identities=20% Similarity=0.318 Sum_probs=189.7
Q ss_pred CCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecc
Q 005864 404 FDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
......|.+...|+.|+|++. |..+++|++..... .....++|..|.-.++-+.||||++++|.|..+....++..||
T Consensus 192 lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~-t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m 269 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREV-TARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM 269 (448)
T ss_pred hhhhhhhccCCCccccccccc-Ccchhhhhhhhhhc-chhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence 344556889999999999994 55666677654322 2334578999999999999999999999999999999999999
Q ss_pred cCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeE-EecCCCCCeEeCCCCceEEe--cccceeecCCC
Q 005864 484 ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIV-HRDISSKNVLLSSEYEARVS--DFGIAKFLKPG 560 (673)
Q Consensus 484 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iv-H~dlk~~Nill~~~~~~kl~--Dfg~~~~~~~~ 560 (673)
+.|+|+..+++... -..+-.++.+.+.++|+|++|||+.. +++ ---|.++.|++|++.+++|+ |--++..
T Consensus 270 p~gslynvlhe~t~-vvvd~sqav~faldiargmaflhsle--p~ipr~~lns~hvmidedltarismad~kfsfq---- 342 (448)
T KOG0195|consen 270 PFGSLYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHSLE--PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ---- 342 (448)
T ss_pred cchHHHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhhcc--hhhhhhhcccceEEecchhhhheecccceeeee----
Confidence 99999999998753 45678899999999999999999974 444 44689999999999888774 3222211
Q ss_pred CCCceecccccccccccccccCCcC---cchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVT---EKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~---~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
.....-.+.||+||.+...+.+ .++|+|||++++||+.|+..||...+..+-..... -+-+...++
T Consensus 343 ---e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkia----leglrv~ip---- 411 (448)
T KOG0195|consen 343 ---EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIA----LEGLRVHIP---- 411 (448)
T ss_pred ---ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhh----hccccccCC----
Confidence 1122346889999999876644 47999999999999999999998665544322111 122222222
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
+..+..+.+++.-|.+.||.+||.++.++-.|||
T Consensus 412 --pgis~hm~klm~icmnedpgkrpkfdmivpilek 445 (448)
T KOG0195|consen 412 --PGISRHMNKLMNICMNEDPGKRPKFDMIVPILEK 445 (448)
T ss_pred --CCccHHHHHHHHHHhcCCCCcCCCcceehhhHHH
Confidence 2334458889999999999999999999998875
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-27 Score=228.75 Aligned_cols=292 Identities=21% Similarity=0.228 Sum_probs=230.8
Q ss_pred cCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccC-cccccccccccC
Q 005864 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQ-NHLTGNISEVFG 85 (673)
Q Consensus 7 ~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~-n~i~~~~~~~~~ 85 (673)
.+|..+. +..+.++|..|+|+.+.+++|+.+++|+.|||++|+|+.+.|++|.++++|.+|.+-+ |+|+.++.++|.
T Consensus 60 eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~ 137 (498)
T KOG4237|consen 60 EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFG 137 (498)
T ss_pred cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhh
Confidence 5666665 5778899999999988899999999999999999999988999999999988887777 889999999999
Q ss_pred CCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhcccccccccccccccc------------ccCC
Q 005864 86 IYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIV------------GEIP 153 (673)
Q Consensus 86 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~------------~~~~ 153 (673)
++..|+.|.+.-|++.-+..++|..+++|..|.+.+|.+..+--..|..+.+++.+.+..|.+. ...|
T Consensus 138 gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ 217 (498)
T KOG4237|consen 138 GLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNP 217 (498)
T ss_pred hHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhch
Confidence 9999999999999998888888999999999999999988554458888889999988888732 2234
Q ss_pred ccccCCCCCCEEEccCccccccCCccccC-CCCCCEEEeCCCCCCCcCC-ccccccccccEEEccCCcCccCCchhhhcc
Q 005864 154 IELGNLKSLNYLVLNGNKLSGNLPRVLGS-LSELEYLDLSTNKLSGSIP-ETLGNLLKVHYLNLSNNQFRKEFPVELEKL 231 (673)
Q Consensus 154 ~~l~~l~~L~~L~L~~n~l~~~~~~~l~~-l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l 231 (673)
..++...-..-..+..+++..+.+..|.. +.++..=..+.+...+..| ..|..+++|+.|+|++|+|+.+-+.+|.++
T Consensus 218 ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~ 297 (498)
T KOG4237|consen 218 IETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGA 297 (498)
T ss_pred hhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcch
Confidence 44444445555555666665444444432 1222111122332333444 468899999999999999999989999999
Q ss_pred cCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCc
Q 005864 232 VQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNST 300 (673)
Q Consensus 232 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~ 300 (673)
.+++.|.|..|+|.......|.++..|+.|+|.+|+|+...|.+|..+..|.+|+|-.|++.+-..-.+
T Consensus 298 a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~w 366 (498)
T KOG4237|consen 298 AELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAW 366 (498)
T ss_pred hhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHH
Confidence 999999999999987777788999999999999999999999999999999999999999876654333
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.6e-24 Score=214.14 Aligned_cols=168 Identities=21% Similarity=0.182 Sum_probs=129.7
Q ss_pred HHHhcCCCccceeccCCcEEEEEEEeC--CCCEEEEEeeccchh--hhhHHHHHHHHHHHHHhccCCCcccceeeeeecC
Q 005864 398 IRATKNFDAEQCIGIGGQASVYRGELP--SGEVVAVKKFHSLLL--SEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP 473 (673)
Q Consensus 398 ~~~~~~~~~~~~ig~G~~g~vy~~~~~--~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 473 (673)
....++|.+.+.||+|+||+||+|.+. +++.||||+...... ......+.+.+|++++.+++|+|+++.+..+
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 344578999999999999999999764 577889998653211 1223456799999999999999999633322
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecC-CCCCeEeCCCCceEEeccc
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDI-SSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl-k~~Nill~~~~~~kl~Dfg 552 (673)
+..++||||++|++|... ... . ...++.++++||+|||+. +|+|||| ||+||+++.++.+||+|||
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~~~---~------~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-RPH---G------DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred CCcEEEEEccCCCCHHHh-Ccc---c------hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 457999999999999732 111 1 135788999999999999 9999999 9999999999999999999
Q ss_pred ceeecCCCCCC--------ceeccccccccccccccc
Q 005864 553 IAKFLKPGSSN--------WTEFAGTFGYVAPELAYT 581 (673)
Q Consensus 553 ~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~ 581 (673)
+|+.+...... .....+++.|+|||++..
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 99977543211 134557788999998753
|
|
| >KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-25 Score=216.25 Aligned_cols=296 Identities=18% Similarity=0.161 Sum_probs=204.1
Q ss_pred EEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccC-Cc
Q 005864 21 LYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISH-NN 99 (673)
Q Consensus 21 L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~-n~ 99 (673)
.+-++-+++ .+|..+. ..-+.++|..|+|+.+.+.+|+.+++|+.|||++|+|+.|.+.+|.++++|..|-+.+ |+
T Consensus 51 VdCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 51 VDCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred EEccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc
Confidence 344444555 4554443 3566777777777766677777777777777777777777777777777777766655 77
Q ss_pred cccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccc-----
Q 005864 100 FYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSG----- 174 (673)
Q Consensus 100 i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~----- 174 (673)
|+.+..+.|.++..|+.|.+.-|++.-+..++|..+++|..|.+.+|.+..+-...|..+.+++.+.+..|.+-.
T Consensus 128 I~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~ 207 (498)
T KOG4237|consen 128 ITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLP 207 (498)
T ss_pred hhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccc
Confidence 777777777777777777777777776666777777777777777777764444466777777777777766321
Q ss_pred -------cCCccccCCCCCCEEEeCCCCCCCcCCcccccc-ccccEEEccCCcCccCC-chhhhcccCCCeEeecCCcCC
Q 005864 175 -------NLPRVLGSLSELEYLDLSTNKLSGSIPETLGNL-LKVHYLNLSNNQFRKEF-PVELEKLVQLSELDLSHNFLG 245 (673)
Q Consensus 175 -------~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l-~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~ls~N~l~ 245 (673)
..|..++...-..-..+.++++....+..|... ..+.+=..+.+....+. ...|..+++|++|+|++|+|+
T Consensus 208 wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~ 287 (498)
T KOG4237|consen 208 WLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKIT 287 (498)
T ss_pred hhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccc
Confidence 112222222223333333444433333333321 12211112223233333 356999999999999999999
Q ss_pred CCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCcccc-cCccccccCCcCCCCC
Q 005864 246 GEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQ-YDPIQALRGNRGLCGD 319 (673)
Q Consensus 246 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~-~~~~~~~~~n~~~c~~ 319 (673)
++-+.+|.++..|++|.|..|+|..+....|.++.+|+.|+|.+|+|+...|.++... ......+.+||+.|..
T Consensus 288 ~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC 362 (498)
T KOG4237|consen 288 RIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNC 362 (498)
T ss_pred hhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCcc
Confidence 9999999999999999999999999989999999999999999999999999876554 3456778899998853
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.3e-22 Score=221.81 Aligned_cols=254 Identities=26% Similarity=0.284 Sum_probs=198.4
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS 81 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 81 (673)
|.|+ .+|+.+. ++|+.|++++|+++. +|. ..++|++|+|++|+|+ .+|. ..++|+.|+|++|.+..++.
T Consensus 211 ~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~---lp~sL~~L~Ls~N~L~~Lp~ 279 (788)
T PRK15387 211 SGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTHLPA 279 (788)
T ss_pred CCCC-cCCcchh--cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccC---cccccceeeccCCchhhhhh
Confidence 5676 6888886 489999999999994 553 3578999999999998 4453 24688999999999886543
Q ss_pred cccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCC
Q 005864 82 EVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKS 161 (673)
Q Consensus 82 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~ 161 (673)
.+++|+.|+|++|+++.++. .+++|+.|+|++|++++ +|.. ..+|+.|++++|+++ .+|.. .++
T Consensus 280 ----lp~~L~~L~Ls~N~Lt~LP~----~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~-~LP~l---p~~ 343 (788)
T PRK15387 280 ----LPSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLT-SLPTL---PSG 343 (788)
T ss_pred ----chhhcCEEECcCCccccccc----cccccceeECCCCcccc-CCCC---cccccccccccCccc-ccccc---ccc
Confidence 23678899999999985432 34789999999999995 4432 246888999999997 45532 258
Q ss_pred CCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecC
Q 005864 162 LNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241 (673)
Q Consensus 162 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~ 241 (673)
|+.|+|++|+|+. +|.. .++|+.|++++|.++ .+|.. ..+|+.|++++|+|++ +|.. .++|+.|++++
T Consensus 344 Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~-~LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~ 411 (788)
T PRK15387 344 LQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSG 411 (788)
T ss_pred cceEecCCCccCC-CCCC---Ccccceehhhccccc-cCccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccC
Confidence 9999999999994 5543 357888999999998 46654 3579999999999985 4433 25799999999
Q ss_pred CcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCC
Q 005864 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNS 299 (673)
Q Consensus 242 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~ 299 (673)
|.++ .+|.. ..+|+.|++++|+|+. +|..+..+++|+.|+|++|+|++.++..
T Consensus 412 N~Ls-sIP~l---~~~L~~L~Ls~NqLt~-LP~sl~~L~~L~~LdLs~N~Ls~~~~~~ 464 (788)
T PRK15387 412 NRLT-SLPML---PSGLLSLSVYRNQLTR-LPESLIHLSSETTVNLEGNPLSERTLQA 464 (788)
T ss_pred CcCC-CCCcc---hhhhhhhhhccCcccc-cChHHhhccCCCeEECCCCCCCchHHHH
Confidence 9998 56653 3578899999999985 5888999999999999999999877653
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.3e-22 Score=204.14 Aligned_cols=255 Identities=22% Similarity=0.229 Sum_probs=187.6
Q ss_pred CCCccceeccCCcEEEEEEEeCCC--CEEEEEeeccchhhhhHHHHHHHHHHHHHhccCC----Ccccceeeee-ecCCe
Q 005864 403 NFDAEQCIGIGGQASVYRGELPSG--EVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH----RNIVKFYGFC-SHPRH 475 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~-~~~~~ 475 (673)
+|.+.+.||+|+||.||.+..... ..+|+|......... ...+..|..++..+.. +++..+++.. ..+..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~---~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK---PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC---CccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 789999999999999999976553 478888765532221 1156778888888863 6899999999 57888
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-----CceEEec
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-----YEARVSD 550 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-----~~~kl~D 550 (673)
.++||+.+ |.+|.++..... ...++..+..+|+.|+..+|.++|+. |++||||||.|+++... ..+.+.|
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred eEEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEe
Confidence 99999966 669999886655 46799999999999999999999999 99999999999999765 4699999
Q ss_pred cccee--ecCCCCC-------C-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc
Q 005864 551 FGIAK--FLKPGSS-------N-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM 620 (673)
Q Consensus 551 fg~~~--~~~~~~~-------~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~ 620 (673)
||+++ .+..... . .....||..|+++....+...+.+.|+||++.++.|+..|..||.............
T Consensus 171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~ 250 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFE 250 (322)
T ss_pred cCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHH
Confidence 99998 3211111 1 123559999999999999999999999999999999999999986443221110000
Q ss_pred ccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 621 NLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.......... .....+.++.++...+-..+..++|....+...++
T Consensus 251 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~ 295 (322)
T KOG1164|consen 251 KDPRKLLTDR-------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLK 295 (322)
T ss_pred HHhhhhcccc-------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHH
Confidence 0000000110 01112234555555566688999999988877653
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-21 Score=201.34 Aligned_cols=260 Identities=28% Similarity=0.392 Sum_probs=198.3
Q ss_pred CCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCC-cccceeeeeecCCeeeEEEec
Q 005864 404 FDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR-NIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 482 (673)
|...+.+|.|+||.||++... ..+++|.+.............+.+|+..+..+.|+ +++++.+++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667788999999999999876 88999998776544433578899999999999988 799999999777778999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-ceEEecccceeecCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-EARVSDFGIAKFLKPGS 561 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~~~~~ 561 (673)
+.++++.+++........++......++.|++.++.|+|+. +++|||+||+||+++..+ .++++|||.+.......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999997777653112577888999999999999999999 999999999999999988 79999999998665433
Q ss_pred C------Cceeccccccccccccccc---CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC--
Q 005864 562 S------NWTEFAGTFGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP-- 630 (673)
Q Consensus 562 ~------~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 630 (673)
. ......|+..|+|||.+.+ ..+....|+||+|++++++++|..||........ .............+
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~ 235 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSA-TSQTLKIILELPTPSL 235 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcccc-HHHHHHHHHhcCCccc
Confidence 2 2356789999999999987 5788899999999999999999999764332100 00000001111100
Q ss_pred CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 631 RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 631 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...............+.+++..|+..+|..|.++.+...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 236 ASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred ccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 000000000122345788999999999999999887654
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.3e-23 Score=223.18 Aligned_cols=254 Identities=19% Similarity=0.239 Sum_probs=191.2
Q ss_pred CccceeccCCcEEEEEEEe-CCCCEEEEEeecc---chhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 405 DAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHS---LLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 405 ~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~---~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
...+++|.|++|.|+.+.. ......+.|.+.. ....+......+..|+.+-..++|||++..+..+.+.....-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 4567899999998887744 3344455554331 11222222333778888889999999998888887776666669
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|||++ +|...+...+ .+....+..+++|+..|++|+|+. |+.|||+|++|++++.++.+||+|||.+....-+
T Consensus 401 E~~~~-Dlf~~~~~~~---~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNG---KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred hcccH-HHHHHHhccc---ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 99999 9999998752 366678888999999999999999 9999999999999999999999999999866433
Q ss_pred CC----CceecccccccccccccccCCcCc-chhHHHHHHHHHHHHhCCCCCcccccccccc-cccccccccccCCCCCC
Q 005864 561 SS----NWTEFAGTFGYVAPELAYTMKVTE-KCDVYSFGVLALEVIKGKHPRDFISLLSSSS-SNMNLSLNEILDPRLPL 634 (673)
Q Consensus 561 ~~----~~~~~~~~~~y~aPE~~~~~~~~~-~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 634 (673)
.. ......|+-.|+|||.+.+..|++ ..||||.|+++..|++|+.||..+...+... ......... ....
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~----~~~~ 549 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRN----IFEG 549 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccc----cccC
Confidence 22 235678999999999999999877 5899999999999999999987554332211 111111111 1112
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.......+.+...++-++++.||.+|-|++++++
T Consensus 550 ~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 550 PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred hHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 22334455667888999999999999999999986
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=8e-22 Score=185.15 Aligned_cols=186 Identities=14% Similarity=0.151 Sum_probs=141.5
Q ss_pred ccCcccHHHHHHH--hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHH------HHHHHHHHhccC
Q 005864 388 FEGKIVYEEIIRA--TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQRE------FLNEIKALTEIR 459 (673)
Q Consensus 388 ~~~~~~~~~~~~~--~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~------~~~e~~~l~~l~ 459 (673)
.+.+..|.++... .++|...+++|.|+||.||.+.. ++..+|+|.+.......+..... +.+|+..+.+++
T Consensus 15 ~~~~~~~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~ 93 (232)
T PRK10359 15 KDNDNKYKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVR 93 (232)
T ss_pred cCCcccHHHHHHHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 3344444444432 57899999999999999999866 67789999997655444433333 689999999999
Q ss_pred CCcccceeeeeecC--------CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEe
Q 005864 460 HRNIVKFYGFCSHP--------RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHR 531 (673)
Q Consensus 460 h~niv~l~~~~~~~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~ 531 (673)
||+|..+.+++... +..++||||++|.+|.++.. ++. ....+++.++..+|+. |++||
T Consensus 94 ~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~~---gi~H~ 159 (232)
T PRK10359 94 SEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQH---GMVSG 159 (232)
T ss_pred HCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHHc---CCccC
Confidence 99999999886532 35789999999999988732 221 2456899999999999 99999
Q ss_pred cCCCCCeEeCCCCceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHH
Q 005864 532 DISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI 601 (673)
Q Consensus 532 dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~ 601 (673)
|++|+||++++++ ++++|||........... ..+.....+..++|+||||+.+....
T Consensus 160 Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 160 DPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAK------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCChHHEEEeCCC-EEEEECCCcccccchhhH------------HHHHHHhHhcccccccceeEeehHHH
Confidence 9999999999988 999999988654221111 11334445667999999999977654
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-22 Score=217.77 Aligned_cols=245 Identities=23% Similarity=0.259 Sum_probs=184.5
Q ss_pred CCCccceeccCCcEEEEEEEeCCCCEEEEEeeccch-hhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLL-LSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|..++.+|++.|=+|.+|+++.|. |+||++-+.. ...-....+-..|++ ....+|||.+++.-+-..+...|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5777899999999999999998888 8888885542 122222333344444 555689999999998888888899999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec--CC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL--KP 559 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~--~~ 559 (673)
|... +|+|.+..+ .-+...+.+.|+.|++.|+.-+|.. ||+|||||.+|||++.=..+.|+||..-+.. ..
T Consensus 102 yvkh-nLyDRlSTR---PFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTR---PFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred HHhh-hhhhhhccc---hHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 9988 999999765 4577888889999999999999999 9999999999999999888999999877532 11
Q ss_pred CC-CCceecc----cccccccccccccCC-----------cCcchhHHHHHHHHHHHHh-CCCCCccccccccc---ccc
Q 005864 560 GS-SNWTEFA----GTFGYVAPELAYTMK-----------VTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSS---SSN 619 (673)
Q Consensus 560 ~~-~~~~~~~----~~~~y~aPE~~~~~~-----------~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~---~~~ 619 (673)
++ ...+.+. .-..|.|||.+.... .+++.||||+||+++|+++ |++||...+...-. ...
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~ 254 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADD 254 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccC
Confidence 11 1122222 234699999875421 5678999999999999998 78888855443211 111
Q ss_pred cccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 620 MNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.+..++++-|. .+..++..|++.||++|-+++++++.
T Consensus 255 ~e~~Le~Ied~--------------~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 255 PEQLLEKIEDV--------------SLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHHHhCcCc--------------cHHHHHHHHHccCchhccCHHHHHHh
Confidence 12222222222 37789999999999999999999875
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-20 Score=222.50 Aligned_cols=274 Identities=22% Similarity=0.273 Sum_probs=148.8
Q ss_pred cCCCcccCCC-CCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcc-ccccccccc
Q 005864 7 AIPPSVGNFT-NLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNH-LTGNISEVF 84 (673)
Q Consensus 7 ~~p~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~-i~~~~~~~~ 84 (673)
.+|+.|..++ +|+.|.+.++.++ ..|..| ...+|+.|+|++|++. .++..+..+++|+.|+|++|. +..+ + .+
T Consensus 579 ~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~i-p-~l 653 (1153)
T PLN03210 579 HLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEI-P-DL 653 (1153)
T ss_pred ecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcC-C-cc
Confidence 4555555543 3666666666555 445444 3456666666666665 445556666666666666553 3322 2 25
Q ss_pred CCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCE
Q 005864 85 GIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNY 164 (673)
Q Consensus 85 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~ 164 (673)
+.+++|++|+|++|......+..+.++++|+.|++++|.....+|..+ ++++|+.|++++|......|.. .++|+.
T Consensus 654 s~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~ 729 (1153)
T PLN03210 654 SMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISW 729 (1153)
T ss_pred ccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCe
Confidence 566666666666654444455566666666666666643333444433 4566666666665443333321 245566
Q ss_pred EEccCccccccCCccc------------------------------cCCCCCCEEEeCCCCCCCcCCccccccccccEEE
Q 005864 165 LVLNGNKLSGNLPRVL------------------------------GSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLN 214 (673)
Q Consensus 165 L~L~~n~l~~~~~~~l------------------------------~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 214 (673)
|++++|.+. .+|..+ ...++|+.|++++|.....+|..+.++++|+.|+
T Consensus 730 L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~ 808 (1153)
T PLN03210 730 LDLDETAIE-EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLE 808 (1153)
T ss_pred eecCCCccc-cccccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEE
Confidence 666666654 233221 1123555555555554445566666666666666
Q ss_pred ccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccC-cccc
Q 005864 215 LSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISY-NELL 293 (673)
Q Consensus 215 l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~-N~l~ 293 (673)
+++|...+.+|..+ .+++|+.|++++|.....+|.. ..+|+.|+|++|.++. +|..+..+++|+.|++++ |.+.
T Consensus 809 Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~~-iP~si~~l~~L~~L~L~~C~~L~ 883 (1153)
T PLN03210 809 IENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIEE-VPWWIEKFSNLSFLDMNGCNNLQ 883 (1153)
T ss_pred CCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCcc-ChHHHhcCCCCCEEECCCCCCcC
Confidence 66554333344333 4556666666665443333322 2456666666666653 355666677777777776 3344
Q ss_pred CC
Q 005864 294 GL 295 (673)
Q Consensus 294 ~~ 295 (673)
+.
T Consensus 884 ~l 885 (1153)
T PLN03210 884 RV 885 (1153)
T ss_pred cc
Confidence 43
|
syringae 6; Provisional |
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.3e-21 Score=185.74 Aligned_cols=236 Identities=19% Similarity=0.208 Sum_probs=156.5
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCC----------Ccccceeeeee
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH----------RNIVKFYGFCS 471 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h----------~niv~l~~~~~ 471 (673)
.+...+.||.|+++.||.+++. +|+.+|||++...........+.+.+|.-....+.+ -.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3445688999999999999775 599999999977665555567888888766666432 22222222221
Q ss_pred ---------cC---C-----eeeEEEecccCCChHHHHhc---C-CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEE
Q 005864 472 ---------HP---R-----HSFLVYECLERGSLAEILSN---D-GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVH 530 (673)
Q Consensus 472 ---------~~---~-----~~~lv~e~~~~gsL~~~l~~---~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 530 (673)
.. . ..+++|+-+.+ +|.+++.. . .....+....+..+..|+.+.+++||+. |++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~-dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQG-DLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SE-EHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhh-cHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEe
Confidence 11 1 12578887754 88887643 2 1123466677788889999999999999 9999
Q ss_pred ecCCCCCeEeCCCCceEEecccceeecCCCCCCceeccccccccccccccc--------CCcCcchhHHHHHHHHHHHHh
Q 005864 531 RDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT--------MKVTEKCDVYSFGVLALEVIK 602 (673)
Q Consensus 531 ~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~il~el~~ 602 (673)
+||+|+|++++++|.++++||+........ ......+..|.|||.... ..++.+.|.|++|+++|.|.+
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~---~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTR---YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEE---EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCce---eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 999999999999999999999988765321 111344577999997643 247889999999999999999
Q ss_pred CCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCC
Q 005864 603 GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESR 661 (673)
Q Consensus 603 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R 661 (673)
|..||+......... . .+ ..+. +.+..+..+|..+|+++|.+|
T Consensus 246 ~~lPf~~~~~~~~~~----~--------~f---~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 246 GRLPFGLSSPEADPE----W--------DF---SRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SS-STCCCGGGSTSG----G--------GG---TTSS----HHHHHHHHHHT-SSGGGS
T ss_pred ccCCCCCCCcccccc----c--------cc---hhcC-CcCHHHHHHHHHHccCCcccC
Confidence 999998442211110 0 11 1233 666779999999999999988
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-21 Score=181.24 Aligned_cols=143 Identities=20% Similarity=0.214 Sum_probs=110.7
Q ss_pred cceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhH-----------------------HHHHHHHHHHHHhccCCCcc
Q 005864 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEIS-----------------------VQREFLNEIKALTEIRHRNI 463 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~-----------------------~~~~~~~e~~~l~~l~h~ni 463 (673)
...||+|+||.||+|..++|+.||||+++........ .......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999998889999999999764321111 01223459999999988877
Q ss_pred cceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHH-hhcCCCCeEEecCCCCCeEeCC
Q 005864 464 VKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM-HHDCFPPIVHRDISSKNVLLSS 542 (673)
Q Consensus 464 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~dlk~~Nill~~ 542 (673)
.....+... ..++||||++++++....... ..+++.....++.|++.+|.|+ |+. +|+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~- 152 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH- 152 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE-
Confidence 544433322 238999999998776553322 3478889999999999999999 688 999999999999998
Q ss_pred CCceEEecccceeecC
Q 005864 543 EYEARVSDFGIAKFLK 558 (673)
Q Consensus 543 ~~~~kl~Dfg~~~~~~ 558 (673)
++.++++|||+|....
T Consensus 153 ~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 DGKLYIIDVSQSVEHD 168 (190)
T ss_pred CCcEEEEEccccccCC
Confidence 4789999999997543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.6e-21 Score=175.48 Aligned_cols=255 Identities=20% Similarity=0.277 Sum_probs=189.1
Q ss_pred HHHHHHHhcCCCccceeccCCcEEEEEE-EeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeee
Q 005864 394 YEEIIRATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCS 471 (673)
Q Consensus 394 ~~~~~~~~~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~ 471 (673)
.+++.+ ..+|.+++.||.|+||.+|.| ...+|..||||.-..... ...+..|..+...++ ...|..+..|..
T Consensus 8 ~~~~iv-~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-----hpqL~yEskvY~iL~~g~GiP~i~~y~~ 81 (341)
T KOG1163|consen 8 LEELIV-GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-----HPQLLYESKVYRILQGGVGIPHIRHYGT 81 (341)
T ss_pred hhhhee-ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-----CcchhHHHHHHHHhccCCCCchhhhhcc
Confidence 344443 367999999999999999999 557899999998544321 245678899999896 567888888888
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC---CceEE
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE---YEARV 548 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl 548 (673)
+...-.+|||.. |.||.++..-+. ..++..+++-+|-|+..-++|+|.+ +++||||||+|+++.-+ ..+.+
T Consensus 82 e~~ynvlVMdLL-GPsLEdLfnfC~--R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~L 155 (341)
T KOG1163|consen 82 EKDYNVLVMDLL-GPSLEDLFNFCS--RRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYL 155 (341)
T ss_pred ccccceeeeecc-CccHHHHHHHHh--hhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEE
Confidence 999999999977 569999988764 4689999999999999999999999 89999999999999654 46899
Q ss_pred ecccceeecCCCCC-------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccc
Q 005864 549 SDFGIAKFLKPGSS-------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN 621 (673)
Q Consensus 549 ~Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~ 621 (673)
+|||+|+.+..... ......||.+|.+-....+...+...|+=|+|.++.+.-.|..||.+...... .
T Consensus 156 IDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk-----~ 230 (341)
T KOG1163|consen 156 IDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATK-----K 230 (341)
T ss_pred EeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhH-----H
Confidence 99999998754322 12346799999988888788888899999999999999999999986543211 1
Q ss_pred cccccccCCCCCCCCc-chHHHHHHHHHHHHHcccCCCCCCCCHH
Q 005864 622 LSLNEILDPRLPLPSR-NIQDKLISILEVALLCLEESPESRPTMQ 665 (673)
Q Consensus 622 ~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~ 665 (673)
...+.+...++..+.+ .....+.++.-.+.-|-..--++-|...
T Consensus 231 QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ 275 (341)
T KOG1163|consen 231 QKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYM 275 (341)
T ss_pred HHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHH
Confidence 1122222333322211 0112233455556666666555656543
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.3e-23 Score=217.65 Aligned_cols=298 Identities=31% Similarity=0.357 Sum_probs=208.5
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS 81 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 81 (673)
|.+.+.++..+.++.. .|+|++|.+. . -.+..+.+|+.|....|+++... -.-++|+.|+.++|.++.+..
T Consensus 166 n~l~~~~~~~i~~l~~--~ldLr~N~~~-~--~dls~~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~ 236 (1081)
T KOG0618|consen 166 NVLGGSFLIDIYNLTH--QLDLRYNEME-V--LDLSNLANLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDV 236 (1081)
T ss_pred hhcccchhcchhhhhe--eeecccchhh-h--hhhhhccchhhhhhhhcccceEE----ecCcchheeeeccCcceeecc
Confidence 4556666666666666 6777777776 2 23566677777777777776321 223667777777777773221
Q ss_pred cccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCC
Q 005864 82 EVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKS 161 (673)
Q Consensus 82 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~ 161 (673)
. ....+|+++++++|+++..+ +.++.+.+|+.|...+|.++ .+|..+...++|+.|++..|.+. .+|..+..+++
T Consensus 237 -~-p~p~nl~~~dis~n~l~~lp-~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~s 311 (1081)
T KOG0618|consen 237 -H-PVPLNLQYLDISHNNLSNLP-EWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKS 311 (1081)
T ss_pred -c-cccccceeeecchhhhhcch-HHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccce
Confidence 1 23457889999999888655 88888899999999999986 67777888888888888888887 66777777888
Q ss_pred CCEEEccCccccccCCccccC-------------------------CCCCCEEEeCCCCCCCcCCccccccccccEEEcc
Q 005864 162 LNYLVLNGNKLSGNLPRVLGS-------------------------LSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLS 216 (673)
Q Consensus 162 L~~L~L~~n~l~~~~~~~l~~-------------------------l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~ 216 (673)
|++|+|..|+|....+..|.. ++.|+.|.+.+|.+++..-..+.++++|+.|+|+
T Consensus 312 L~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLs 391 (1081)
T KOG0618|consen 312 LRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLS 391 (1081)
T ss_pred eeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeec
Confidence 888888888887322211111 1234556667777776655566777788888888
Q ss_pred CCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCC-
Q 005864 217 NNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGL- 295 (673)
Q Consensus 217 ~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~- 295 (673)
+|++.......+.+++.|+.|+||+|+++ .+|..+..++.|++|...+|++... | .+..++.|+.+|++.|.|+..
T Consensus 392 yNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~f-P-e~~~l~qL~~lDlS~N~L~~~~ 468 (1081)
T KOG0618|consen 392 YNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLSF-P-ELAQLPQLKVLDLSCNNLSEVT 468 (1081)
T ss_pred ccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceeec-h-hhhhcCcceEEecccchhhhhh
Confidence 88887666667777888888888888887 6777777777777777777777644 4 677778888888888887754
Q ss_pred CCCCcccccCccccccCCcCC
Q 005864 296 IPNSTGFQYDPIQALRGNRGL 316 (673)
Q Consensus 296 ~~~~~~~~~~~~~~~~~n~~~ 316 (673)
+|....+.......+.||.++
T Consensus 469 l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 469 LPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred hhhhCCCcccceeeccCCccc
Confidence 343444455556667777764
|
|
| >PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-20 Score=206.72 Aligned_cols=258 Identities=27% Similarity=0.275 Sum_probs=200.1
Q ss_pred CCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEc
Q 005864 16 TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDI 95 (673)
Q Consensus 16 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 95 (673)
..-..|+|++|.++ .+|..+. ++|+.|++++|+++ .+|. .+++|++|+|++|+|+.++. ..++|+.|+|
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~LtsLP~----lp~sL~~L~L 269 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSLPV----LPPGLLELSI 269 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccCcccC----cccccceeec
Confidence 44678999999999 6787776 48999999999998 4564 35899999999999997653 3578999999
Q ss_pred cCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCcccccc
Q 005864 96 SHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175 (673)
Q Consensus 96 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~ 175 (673)
++|.++.+.. .+.+|+.|++++|+++. +|. ..++|+.|++++|++++ +|.. ..+|+.|++++|++++
T Consensus 270 s~N~L~~Lp~----lp~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls~N~L~~- 336 (788)
T PRK15387 270 FSNPLTHLPA----LPSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS- 336 (788)
T ss_pred cCCchhhhhh----chhhcCEEECcCCcccc-ccc---cccccceeECCCCcccc-CCCC---cccccccccccCcccc-
Confidence 9999985432 23678999999999994 454 24789999999999984 4542 2478899999999984
Q ss_pred CCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCC
Q 005864 176 LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNL 255 (673)
Q Consensus 176 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 255 (673)
+|.. ..+|+.|+|++|+|+ .+|.. ..+|+.|++++|+|+. +|.. ..+|+.|++++|.|+ .+|.. .
T Consensus 337 LP~l---p~~Lq~LdLS~N~Ls-~LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt-~LP~l---~ 401 (788)
T PRK15387 337 LPTL---PSGLQELSVSDNQLA-SLPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLT-SLPVL---P 401 (788)
T ss_pred cccc---ccccceEecCCCccC-CCCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCccc-CCCCc---c
Confidence 5532 258999999999999 45643 3578899999999995 4543 247999999999998 45643 3
Q ss_pred CcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCcccccCccccccCCcCC
Q 005864 256 ESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGL 316 (673)
Q Consensus 256 ~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~ 316 (673)
++|+.|++++|+|+++ |.. ..+|+.|++++|+++..+.....+.....+.+.+|+..
T Consensus 402 s~L~~LdLS~N~LssI-P~l---~~~L~~L~Ls~NqLt~LP~sl~~L~~L~~LdLs~N~Ls 458 (788)
T PRK15387 402 SELKELMVSGNRLTSL-PML---PSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLS 458 (788)
T ss_pred cCCCEEEccCCcCCCC-Ccc---hhhhhhhhhccCcccccChHHhhccCCCeEECCCCCCC
Confidence 6899999999999875 543 34688999999999965444444555566777777643
|
|
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.3e-21 Score=211.58 Aligned_cols=248 Identities=27% Similarity=0.373 Sum_probs=187.4
Q ss_pred CCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEc
Q 005864 16 TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDI 95 (673)
Q Consensus 16 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 95 (673)
.+.+.|+|+++.++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|++|+|++|+++.++... .++|+.|+|
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~LtsLP~~l---~~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLTSIPATL---PDTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccccCChhh---hccccEEEC
Confidence 35788999999988 5676654 57999999999998 4565443 58999999999998665432 247899999
Q ss_pred cCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCcccccc
Q 005864 96 SHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175 (673)
Q Consensus 96 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~ 175 (673)
++|.+..+ +..+. .+|+.|++++|+++ .+|..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|.++.
T Consensus 249 s~N~L~~L-P~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~Ls~N~Lt~- 318 (754)
T PRK15370 249 SINRITEL-PERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNVQSNSLTA- 318 (754)
T ss_pred cCCccCcC-ChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHhcCCcccc-
Confidence 99998854 33332 57899999999998 4566553 48999999999988 4554443 578899999999984
Q ss_pred CCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCC
Q 005864 176 LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNL 255 (673)
Q Consensus 176 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 255 (673)
+|..+ .++|+.|++++|.++ .+|..+. ++|+.|++++|+++. +|..+. ++|+.|+|++|.++ .+|..+.
T Consensus 319 LP~~l--~~sL~~L~Ls~N~Lt-~LP~~l~--~sL~~L~Ls~N~L~~-LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~-- 387 (754)
T PRK15370 319 LPETL--PPGLKTLEAGENALT-SLPASLP--PELQVLDVSKNQITV-LPETLP--PTITTLDVSRNALT-NLPENLP-- 387 (754)
T ss_pred CCccc--cccceeccccCCccc-cCChhhc--CcccEEECCCCCCCc-CChhhc--CCcCEEECCCCcCC-CCCHhHH--
Confidence 45433 268999999999998 4666554 689999999999884 565554 58999999999998 5666554
Q ss_pred CcccEEEecCccccccCcc----ccccCCCccEEEccCccccC
Q 005864 256 ESLEKLNVSHNNLSGLIPS----CFEGMHGLSCIDISYNELLG 294 (673)
Q Consensus 256 ~~L~~L~l~~N~l~~~~~~----~~~~~~~L~~l~l~~N~l~~ 294 (673)
..|+.|++++|+|++. |. .+..++.+..|++.+|+++.
T Consensus 388 ~sL~~LdLs~N~L~~L-P~sl~~~~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 388 AALQIMQASRNNLVRL-PESLPHFRGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred HHHHHHhhccCCcccC-chhHHHHhhcCCCccEEEeeCCCccH
Confidence 3688999999999854 43 33445888999999999873
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-20 Score=176.53 Aligned_cols=199 Identities=21% Similarity=0.331 Sum_probs=169.4
Q ss_pred cCCCccceeccCCcEEEEEE-EeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 479 (673)
-.|.+++.||.|.||.++.| .+-+++.||||.-... +...++..|....+.+ ..+.|..++-|..++.+-.+|
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk-----S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK-----SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEecccc-----CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 47999999999999999999 4458999999974332 2245667788888888 589999999888888888999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-----ceEEecccce
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-----EARVSDFGIA 554 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-----~~kl~Dfg~~ 554 (673)
+|.+ |-||.|+..-++ ..|+..++..||.|+..-++|+|++ .+|.|||||+|+||...+ .+.++|||+|
T Consensus 103 idLL-GPSLEDLFD~Cg--R~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmA 176 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDLCG--RRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMA 176 (449)
T ss_pred hhhh-CcCHHHHHHHhc--CcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccch
Confidence 9977 569999988776 5699999999999999999999999 999999999999997543 4899999999
Q ss_pred eecCCCCCC-------ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccc
Q 005864 555 KFLKPGSSN-------WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIS 611 (673)
Q Consensus 555 ~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~ 611 (673)
+.+...... .....||.+||+-....+.+.+...|.=|+|=++.+.+.|..||.+..
T Consensus 177 K~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK 240 (449)
T KOG1165|consen 177 KEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK 240 (449)
T ss_pred hhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence 987554322 234679999999999999999999999999999999999999998654
|
|
| >PLN03210 Resistant to P | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.7e-20 Score=218.60 Aligned_cols=272 Identities=22% Similarity=0.246 Sum_probs=195.1
Q ss_pred cCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCC
Q 005864 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGI 86 (673)
Q Consensus 7 ~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~ 86 (673)
.+|..| ...+|++|+|++|.+. .++..+..+++|+.|+|++|.....+| .++.+++|++|+|++|......+..+..
T Consensus 603 ~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~ 679 (1153)
T PLN03210 603 CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQY 679 (1153)
T ss_pred CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhc
Confidence 566666 4577888888888777 456667777788888887765433555 3677777888888777544455566777
Q ss_pred CCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCcc-----------
Q 005864 87 YPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIE----------- 155 (673)
Q Consensus 87 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~----------- 155 (673)
+++|+.|++++|.--...+..+ ++++|+.|+|++|......|.. .++|++|++++|.+. .+|..
T Consensus 680 L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l 754 (1153)
T PLN03210 680 LNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNLRLENLDELIL 754 (1153)
T ss_pred cCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccccccccccccc
Confidence 7777777777753322333333 5667777777766544333322 245566666666554 22321
Q ss_pred -------------------ccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEcc
Q 005864 156 -------------------LGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLS 216 (673)
Q Consensus 156 -------------------l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~ 216 (673)
....++|+.|+|++|.....+|..+.++++|+.|++++|...+.+|..+ ++++|+.|+++
T Consensus 755 ~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls 833 (1153)
T PLN03210 755 CEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLS 833 (1153)
T ss_pred cccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECC
Confidence 1123588999999998777889999999999999999986544777765 78999999999
Q ss_pred CCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCc-cccccCccccccCCCccEEEccCccc
Q 005864 217 NNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHN-NLSGLIPSCFEGMHGLSCIDISYNEL 292 (673)
Q Consensus 217 ~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N-~l~~~~~~~~~~~~~L~~l~l~~N~l 292 (673)
+|......|.. ..+|+.|+|++|.++ .+|..+..+++|+.|+|++| ++.+ +|..+..++.|+.+++++|.-
T Consensus 834 ~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~-l~~~~~~L~~L~~L~l~~C~~ 905 (1153)
T PLN03210 834 GCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQR-VSLNISKLKHLETVDFSDCGA 905 (1153)
T ss_pred CCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCc-cCcccccccCCCeeecCCCcc
Confidence 98655444443 358999999999998 78999999999999999995 5554 566788899999999999853
|
syringae 6; Provisional |
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.84 E-value=4e-20 Score=173.52 Aligned_cols=142 Identities=21% Similarity=0.227 Sum_probs=112.5
Q ss_pred cceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhh-----------------------HHHHHHHHHHHHHhccCCCcc
Q 005864 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEI-----------------------SVQREFLNEIKALTEIRHRNI 463 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~-----------------------~~~~~~~~e~~~l~~l~h~ni 463 (673)
...||+|++|.||+|...+|+.||||++........ .....+..|.+.+.+++|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 467999999999999887899999999876422100 001234678999999999988
Q ss_pred cceeeeeecCCeeeEEEecccCCChHHH-HhcCCCCccchHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEeC
Q 005864 464 VKFYGFCSHPRHSFLVYECLERGSLAEI-LSNDGSIKEFSWIVRTNVIKSVANALSYMHH-DCFPPIVHRDISSKNVLLS 541 (673)
Q Consensus 464 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~ 541 (673)
.....+.... .++||||++++++... +.. ..++......++.|++.++.++|+ . ||+||||||+||+++
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~----~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll~ 152 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKD----VPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILYH 152 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhhhh----ccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEEE
Confidence 6555554432 4899999999865443 332 236778889999999999999999 8 999999999999999
Q ss_pred CCCceEEecccceeecC
Q 005864 542 SEYEARVSDFGIAKFLK 558 (673)
Q Consensus 542 ~~~~~kl~Dfg~~~~~~ 558 (673)
++.++++|||++....
T Consensus 153 -~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 -DGKPYIIDVSQAVELD 168 (190)
T ss_pred -CCCEEEEEcccceecC
Confidence 7899999999998764
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-20 Score=208.07 Aligned_cols=237 Identities=27% Similarity=0.372 Sum_probs=188.2
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS 81 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 81 (673)
+.++ .+|..+. +.|+.|+|++|.|+ .+|..+. ++|+.|+|++|+++ .+|..+. .+|+.|+|++|++..++.
T Consensus 188 ~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~~LP~ 258 (754)
T PRK15370 188 LGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRITELPE 258 (754)
T ss_pred CCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccCcCCh
Confidence 3455 5677765 58999999999999 4565554 58999999999998 5666553 579999999999997654
Q ss_pred cccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCC
Q 005864 82 EVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKS 161 (673)
Q Consensus 82 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~ 161 (673)
... .+|+.|+|++|+++.+ +..+. ++|+.|+|++|+++. +|..+. ++|+.|++++|.++ .+|..+. ++
T Consensus 259 ~l~---s~L~~L~Ls~N~L~~L-P~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt-~LP~~l~--~s 326 (754)
T PRK15370 259 RLP---SALQSLDLFHNKISCL-PENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLT-ALPETLP--PG 326 (754)
T ss_pred hHh---CCCCEEECcCCccCcc-ccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccc-cCCcccc--cc
Confidence 432 5799999999999854 44443 589999999999995 555443 47999999999998 4555443 68
Q ss_pred CCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecC
Q 005864 162 LNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241 (673)
Q Consensus 162 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~ 241 (673)
|+.|++++|.++. +|..+. ++|+.|++++|+++ .+|..+. ++|+.|++++|+++. +|..+.. .|+.|++++
T Consensus 327 L~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt~-LP~~l~~--sL~~LdLs~ 397 (754)
T PRK15370 327 LKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALTN-LPENLPA--ALQIMQASR 397 (754)
T ss_pred ceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCCC-CCHhHHH--HHHHHhhcc
Confidence 9999999999994 565553 79999999999998 5776663 689999999999995 5655553 799999999
Q ss_pred CcCCCCCcccc----cCCCcccEEEecCcccc
Q 005864 242 NFLGGEIPPQI----CNLESLEKLNVSHNNLS 269 (673)
Q Consensus 242 N~l~~~~~~~~----~~l~~L~~L~l~~N~l~ 269 (673)
|++. .+|..+ ..++++..|++.+|+++
T Consensus 398 N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 398 NNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 9998 556543 44588999999999997
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.6e-20 Score=168.49 Aligned_cols=187 Identities=10% Similarity=0.016 Sum_probs=138.8
Q ss_pred CCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhh-HHHHHHHHHHHHHhccC-CCcccceeeeeecCCeeeEEEe
Q 005864 404 FDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEI-SVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 481 (673)
+.++..|++|+||+||.+.. .+.+++.+.+........ -....+.+|+++|+++. |+++++++++ +..+++||
T Consensus 4 ~~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 4 PAVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred cccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 34678899999999998866 678888777654322111 11235889999999995 5889999886 34689999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecC-CCCCeEeCCCCceEEecccceeecCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDI-SSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl-k~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|++|.+|.+.... . ...++.|+++++.++|+. ||+|||| ||+||+++.++.++|+|||++....+.
T Consensus 79 yI~G~~L~~~~~~----~------~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~ 145 (218)
T PRK12274 79 YLAGAAMYQRPPR----G------DLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPR 145 (218)
T ss_pred eecCccHHhhhhh----h------hHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCc
Confidence 9999998754321 0 134678999999999999 9999999 799999999999999999999865443
Q ss_pred CCC-----c--------eecccccccccccccccC-CcC-cchhHHHHHHHHHHHHhCCCCCc
Q 005864 561 SSN-----W--------TEFAGTFGYVAPELAYTM-KVT-EKCDVYSFGVLALEVIKGKHPRD 608 (673)
Q Consensus 561 ~~~-----~--------~~~~~~~~y~aPE~~~~~-~~~-~~~Dv~slG~il~el~~g~~p~~ 608 (673)
... . .....++.|++|+...-. ..+ ...+.++-|.-+|.++||..|..
T Consensus 146 ~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 146 ARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 321 0 011246677777653221 222 46788999999999999999853
|
|
| >KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.1e-22 Score=213.14 Aligned_cols=269 Identities=26% Similarity=0.285 Sum_probs=206.5
Q ss_pred CCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEE
Q 005864 15 FTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLD 94 (673)
Q Consensus 15 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 94 (673)
.++|+.|+.+.|.++...+ .+ .-.+|++++++.|+++ .+|+.+..+.+|+.|+..+|++..++ .....+.+|++|.
T Consensus 218 g~~l~~L~a~~n~l~~~~~-~p-~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~~lp-~ri~~~~~L~~l~ 293 (1081)
T KOG0618|consen 218 GPSLTALYADHNPLTTLDV-HP-VPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLVALP-LRISRITSLVSLS 293 (1081)
T ss_pred CcchheeeeccCcceeecc-cc-ccccceeeecchhhhh-cchHHHHhcccceEecccchhHHhhH-HHHhhhhhHHHHH
Confidence 4678889999998884333 22 3368999999999998 56688999999999999999997544 4555678899999
Q ss_pred ccCCccccccccCccccCCCcEEEcccCccCccCChh-hhcccc-ccccccccccccccCCccccCCCCCCEEEccCccc
Q 005864 95 ISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPE-IGKLYQ-LHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKL 172 (673)
Q Consensus 95 L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-l~~l~~-L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l 172 (673)
+.+|.+. -.+....+++.|++|+|..|+|.. .|+. +.-+.. |+.|+.+.|++....-..-..++.|+.|++.+|.+
T Consensus 294 ~~~nel~-yip~~le~~~sL~tLdL~~N~L~~-lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~L 371 (1081)
T KOG0618|consen 294 AAYNELE-YIPPFLEGLKSLRTLDLQSNNLPS-LPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHL 371 (1081)
T ss_pred hhhhhhh-hCCCcccccceeeeeeehhccccc-cchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcc
Confidence 9999987 445666778899999999999984 4443 333333 77788888887633222223356888888999998
Q ss_pred cccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccc
Q 005864 173 SGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQI 252 (673)
Q Consensus 173 ~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~ 252 (673)
++..-..+.++++|+.|+|++|++.......+.++..|+.|+||+|+++. +|..+..+..|++|...+|.+. ..| .+
T Consensus 372 td~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~-Lp~tva~~~~L~tL~ahsN~l~-~fP-e~ 448 (1081)
T KOG0618|consen 372 TDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTT-LPDTVANLGRLHTLRAHSNQLL-SFP-EL 448 (1081)
T ss_pred cccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhhh-hhHHHHhhhhhHHHhhcCCcee-ech-hh
Confidence 87766778888889999999998875545567888888899999998884 6788888888999999888887 677 78
Q ss_pred cCCCcccEEEecCccccccCccccccCCCccEEEccCccc
Q 005864 253 CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292 (673)
Q Consensus 253 ~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l 292 (673)
..++.|+.+|+|.|+|+...-......++|++|||+||..
T Consensus 449 ~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 449 AQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred hhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 8888999999999988866444444458889999999874
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.5e-22 Score=203.91 Aligned_cols=273 Identities=23% Similarity=0.256 Sum_probs=186.5
Q ss_pred EEEeeCCccc-cCCCccccCCCCCCEEEcccCccccc----cCccccCCCCCcEEEccCccccc------ccccccCCCC
Q 005864 20 GLYLYSNSLS-GSVPGEIGNLMQLTNLEIDNNQLFGQ----IPRSLRNLASLNRVHLEQNHLTG------NISEVFGIYP 88 (673)
Q Consensus 20 ~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~i~~~----~~~~l~~l~~L~~L~L~~n~i~~------~~~~~~~~l~ 88 (673)
.|+|+++.++ ......|..+.+|+.|++++|.++.. ++..+...++|++|+++++.+.. ..+..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4677777776 34445566777788888888887532 44556677778888888887762 2234566778
Q ss_pred CccEEEccCCccccccccCccccCC---CcEEEcccCccCc----cCChhhhcc-ccccccccccccccc----cCCccc
Q 005864 89 NLTFLDISHNNFYGEIWSSWGKCQQ---LGTLNFSMNNITG----SIPPEIGKL-YQLHKLDFSLNQIVG----EIPIEL 156 (673)
Q Consensus 89 ~L~~L~L~~n~i~~~~~~~~~~l~~---L~~L~L~~n~l~~----~~~~~l~~l-~~L~~L~l~~n~i~~----~~~~~l 156 (673)
+|++|+|++|.+....+..+..+.+ |++|++++|+++. .+...+..+ ++|++|++++|.+++ ..+..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 8888888888886555555555554 8888888888773 223344555 788888888888763 233445
Q ss_pred cCCCCCCEEEccCcccccc----CCccccCCCCCCEEEeCCCCCCCcC----CccccccccccEEEccCCcCccCCchhh
Q 005864 157 GNLKSLNYLVLNGNKLSGN----LPRVLGSLSELEYLDLSTNKLSGSI----PETLGNLLKVHYLNLSNNQFRKEFPVEL 228 (673)
Q Consensus 157 ~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~l~~n~l~~~~----~~~l~~l~~L~~L~l~~n~l~~~~~~~~ 228 (673)
..+++|++|++++|.+++. ++..+..+++|+.|++++|.+++.. +..+..+++|+.|++++|.+++.....+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 6667888888888888742 2334555678888888888876432 3345567788888888888876434333
Q ss_pred hc-----ccCCCeEeecCCcCCCC----CcccccCCCcccEEEecCcccccc----CccccccC-CCccEEEccCccc
Q 005864 229 EK-----LVQLSELDLSHNFLGGE----IPPQICNLESLEKLNVSHNNLSGL----IPSCFEGM-HGLSCIDISYNEL 292 (673)
Q Consensus 229 ~~-----l~~L~~L~ls~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~~-~~L~~l~l~~N~l 292 (673)
.. .+.|+.|++++|.+++. +...+..+++|+.+++++|.++.. ....+... +.|+++++.+|++
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 32 26888888888888632 234455667888888888888755 33444445 6788888888764
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.83 E-value=2e-20 Score=192.59 Aligned_cols=209 Identities=26% Similarity=0.490 Sum_probs=159.2
Q ss_pred HhccCCCcccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCe-EEecC
Q 005864 455 LTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPI-VHRDI 533 (673)
Q Consensus 455 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i-vH~dl 533 (673)
|+.+.|.|+.+++|.+.++...++|.+||..|+|.|.+.... ..++|.......++++.||+|+|.. +| .|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~--~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED--IKLDYFFILSFIRDISKGLAYLHNS---PIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc--cCccHHHHHHHHHHHHHHHHHHhcC---cceeeeee
Confidence 456899999999999999999999999999999999998743 5689999999999999999999988 55 89999
Q ss_pred CCCCeEeCCCCceEEecccceeecCCC--CCCceecccccccccccccccCC-------cCcchhHHHHHHHHHHHHhCC
Q 005864 534 SSKNVLLSSEYEARVSDFGIAKFLKPG--SSNWTEFAGTFGYVAPELAYTMK-------VTEKCDVYSFGVLALEVIKGK 604 (673)
Q Consensus 534 k~~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~-------~~~~~Dv~slG~il~el~~g~ 604 (673)
+++|.+++..+.+|++|||+....... ...........-|.|||.+.... .+.+.||||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 999999999999999999998876421 11112223446799999987642 466799999999999999999
Q ss_pred CCCcccccccccccccccccccccC-CCCCCCCcc--hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 605 HPRDFISLLSSSSSNMNLSLNEILD-PRLPLPSRN--IQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 605 ~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.||+........ .+....+.+ ..-+..+.. ..+...++..++..||..+|.+||++++|-..++
T Consensus 156 ~~~~~~~~~~~~----~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~ 222 (484)
T KOG1023|consen 156 GPFDLRNLVEDP----DEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLL 222 (484)
T ss_pred CccccccccCCh----HHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhh
Confidence 999854332221 111111111 111111111 1133446899999999999999999999987664
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.7e-19 Score=173.89 Aligned_cols=193 Identities=22% Similarity=0.300 Sum_probs=136.3
Q ss_pred CCCcccceeeeeecC---------------------------CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHH
Q 005864 459 RHRNIVKFYGFCSHP---------------------------RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIK 511 (673)
Q Consensus 459 ~h~niv~l~~~~~~~---------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~ 511 (673)
+|||||++.++|.+. ...|+||..++. +|++++..+. .+...+.-++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~----~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH----RSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC----CchHHHHHHHH
Confidence 599999999877432 235899988876 9999997653 44556667889
Q ss_pred HHHHHHHHHhhcCCCCeEEecCCCCCeEe--CCCC--ceEEecccceeecCCC------CCCceeccccccccccccccc
Q 005864 512 SVANALSYMHHDCFPPIVHRDISSKNVLL--SSEY--EARVSDFGIAKFLKPG------SSNWTEFAGTFGYVAPELAYT 581 (673)
Q Consensus 512 ~i~~~l~~LH~~~~~~ivH~dlk~~Nill--~~~~--~~kl~Dfg~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~ 581 (673)
|+++|+.|||.+ ||.|||+|+.||++ ++|+ ..+|+|||.+---+.- ....-...|.-.-||||+...
T Consensus 349 QlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 999999999999 99999999999999 3443 4789999988533221 111123457778999998765
Q ss_pred CC------cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHccc
Q 005864 582 MK------VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLE 655 (673)
Q Consensus 582 ~~------~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 655 (673)
.+ -..|+|.|+.|.+.||+++...||..-...-- .....-...++..+ ...+..+.+++...++
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L-------~~r~Yqe~qLPalp---~~vpp~~rqlV~~lL~ 495 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLL-------DTRTYQESQLPALP---SRVPPVARQLVFDLLK 495 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhee-------chhhhhhhhCCCCc---ccCChHHHHHHHHHhc
Confidence 43 23489999999999999999999874211100 00111112222211 2334458889999999
Q ss_pred CCCCCCCCHHHHHH
Q 005864 656 ESPESRPTMQTVCQ 669 (673)
Q Consensus 656 ~dp~~Rps~~~v~~ 669 (673)
+||++|++..-...
T Consensus 496 r~pskRvsp~iAAN 509 (598)
T KOG4158|consen 496 RDPSKRVSPNIAAN 509 (598)
T ss_pred CCccccCCccHHHh
Confidence 99999998765443
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.8e-21 Score=195.49 Aligned_cols=227 Identities=25% Similarity=0.306 Sum_probs=182.2
Q ss_pred eeccCCcEEEEEEE----eCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeeeEEEecc
Q 005864 409 CIGIGGQASVYRGE----LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 409 ~ig~G~~g~vy~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
.+|+|.||.|+.++ ...|.-+|.|..++......... ....|..++..++ ||.+|++.-.++.+...+++.+|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~ 79 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFL 79 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhc
Confidence 37999999999873 33577899998877654433323 6677888999996 999999999999999999999999
Q ss_pred cCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC
Q 005864 484 ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN 563 (673)
Q Consensus 484 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~ 563 (673)
.+|.+...+.... .++..........+|-+++++|+. +++|||+|++||+++.+|.+++.|||+++..-....
T Consensus 80 rgg~lft~l~~~~---~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~- 152 (612)
T KOG0603|consen 80 RGGDLFTRLSKEV---MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI- 152 (612)
T ss_pred ccchhhhccccCC---chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhh-
Confidence 9999998887653 366666677788899999999999 999999999999999999999999999986533222
Q ss_pred ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHH
Q 005864 564 WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKL 643 (673)
Q Consensus 564 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (673)
.+||..|||||++. .....+|.||||++.+||+||..||.. +....++...+..| ....
T Consensus 153 ---~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~------------~~~~~Il~~~~~~p----~~l~ 211 (612)
T KOG0603|consen 153 ---ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG------------DTMKRILKAELEMP----RELS 211 (612)
T ss_pred ---cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch------------HHHHHHhhhccCCc----hhhh
Confidence 27899999999987 678899999999999999999999873 22333444444444 3444
Q ss_pred HHHHHHHHHcccCCCCCCCCH
Q 005864 644 ISILEVALLCLEESPESRPTM 664 (673)
Q Consensus 644 ~~l~~li~~cl~~dp~~Rps~ 664 (673)
..+.+++..+...+|..|.-.
T Consensus 212 ~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 212 AEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred HHHHHHHHHHHhhCHHHHhcc
Confidence 557788888888899888644
|
|
| >cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.8e-21 Score=196.33 Aligned_cols=263 Identities=23% Similarity=0.265 Sum_probs=200.9
Q ss_pred ccCCCcccCCCCCCEEEeeCCccccC----CCccccCCCCCCEEEcccCcccc------ccCccccCCCCCcEEEccCcc
Q 005864 6 GAIPPSVGNFTNLKGLYLYSNSLSGS----VPGEIGNLMQLTNLEIDNNQLFG------QIPRSLRNLASLNRVHLEQNH 75 (673)
Q Consensus 6 ~~~p~~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n~i~~------~~~~~l~~l~~L~~L~L~~n~ 75 (673)
+..+..+..+..|+.|+|+++.++.. ++..+...++|+.|+++++.+.. ..+..+..+++|+.|++++|.
T Consensus 13 ~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~ 92 (319)
T cd00116 13 ERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNA 92 (319)
T ss_pred cchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCC
Confidence 34455667788899999999999643 45557788889999999998862 234567889999999999999
Q ss_pred cccccccccCCCCC---ccEEEccCCccccc----cccCcccc-CCCcEEEcccCccCcc----CChhhhcccccccccc
Q 005864 76 LTGNISEVFGIYPN---LTFLDISHNNFYGE----IWSSWGKC-QQLGTLNFSMNNITGS----IPPEIGKLYQLHKLDF 143 (673)
Q Consensus 76 i~~~~~~~~~~l~~---L~~L~L~~n~i~~~----~~~~~~~l-~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~l 143 (673)
+....+..+..+.+ |++|++++|.++.. ....+..+ ++|+.|++++|.+++. .+..+..+.+|++|++
T Consensus 93 ~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l 172 (319)
T cd00116 93 LGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNL 172 (319)
T ss_pred CChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEEC
Confidence 98655555555554 99999999998742 22345566 8999999999999843 3445667789999999
Q ss_pred cccccccc----CCccccCCCCCCEEEccCcccccc----CCccccCCCCCCEEEeCCCCCCCcCCccccc-----cccc
Q 005864 144 SLNQIVGE----IPIELGNLKSLNYLVLNGNKLSGN----LPRVLGSLSELEYLDLSTNKLSGSIPETLGN-----LLKV 210 (673)
Q Consensus 144 ~~n~i~~~----~~~~l~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~-----l~~L 210 (673)
++|.+++. ++..+..+++|+.|++++|.+++. +...+..+++|++|++++|.+++.....+.. .+.|
T Consensus 173 ~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L 252 (319)
T cd00116 173 ANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISL 252 (319)
T ss_pred cCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCc
Confidence 99998742 334456668999999999998743 3345677899999999999998643333332 3799
Q ss_pred cEEEccCCcCccC----CchhhhcccCCCeEeecCCcCCCC----CcccccCC-CcccEEEecCccc
Q 005864 211 HYLNLSNNQFRKE----FPVELEKLVQLSELDLSHNFLGGE----IPPQICNL-ESLEKLNVSHNNL 268 (673)
Q Consensus 211 ~~L~l~~n~l~~~----~~~~~~~l~~L~~L~ls~N~l~~~----~~~~~~~l-~~L~~L~l~~N~l 268 (673)
++|++++|.++.. ....+..+++|+.+++++|.+... ....+... +.|+.|++.+|++
T Consensus 253 ~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 253 LTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred eEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 9999999999732 344566778999999999999965 33445555 7899999998864
|
LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1). |
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.8e-18 Score=161.22 Aligned_cols=136 Identities=16% Similarity=0.189 Sum_probs=104.2
Q ss_pred CccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-----CCCcccceeeeeecCC---e-
Q 005864 405 DAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-----RHRNIVKFYGFCSHPR---H- 475 (673)
Q Consensus 405 ~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~~~~~~~~---~- 475 (673)
.-.+.||+|+||.||. +++....+||++..... ...+.+.+|+.++..+ +||||++++|++.++. .
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~---~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGD---GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCeEEEEEecccc---chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 3457899999999996 54333336888765322 2356789999999999 5799999999998763 3
Q ss_pred eeEEEec--ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHH-HHHhhcCCCCeEEecCCCCCeEeCC----CCceEE
Q 005864 476 SFLVYEC--LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANAL-SYMHHDCFPPIVHRDISSKNVLLSS----EYEARV 548 (673)
Q Consensus 476 ~~lv~e~--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~~~~~~ivH~dlk~~Nill~~----~~~~kl 548 (673)
..+|+|| +++|+|.+++.... +++. ..++.+++.++ +|||++ +|+||||||+||+++. ++.++|
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~~----~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~L 150 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQCR----YEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVV 150 (210)
T ss_pred EEEEecCCCCcchhHHHHHHccc----ccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEE
Confidence 3378999 56899999997632 4444 35677788777 999999 9999999999999974 347999
Q ss_pred ecccce
Q 005864 549 SDFGIA 554 (673)
Q Consensus 549 ~Dfg~~ 554 (673)
+||+-+
T Consensus 151 iDg~G~ 156 (210)
T PRK10345 151 CDNIGE 156 (210)
T ss_pred EECCCC
Confidence 994433
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.6e-18 Score=190.95 Aligned_cols=199 Identities=20% Similarity=0.188 Sum_probs=162.8
Q ss_pred HHHHHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC---CCcccceeeeeec
Q 005864 396 EIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR---HRNIVKFYGFCSH 472 (673)
Q Consensus 396 ~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~ 472 (673)
+.......|.+.+.+|+|+||+||+|...+|+.||+|.-+.....+.- --.+++.+|+ -+.|.++..++.-
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfY------I~~q~~~RLk~~~~~~~~~~~~a~~~ 765 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFY------ICLQVMERLKPQMLPSIMHISSAHVF 765 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeee------ehHHHHHhhchhhhcchHHHHHHHcc
Confidence 334445678888999999999999998888999999997766554322 2233444444 3456666666677
Q ss_pred CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-------CCc
Q 005864 473 PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-------EYE 545 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-------~~~ 545 (673)
.+.-++|+||.+.|||.+++... +..+|.....+..|+++-+++||.. +|||+||||+|+++.. ..-
T Consensus 766 ~~~S~lv~ey~~~Gtlld~~N~~---~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~ 839 (974)
T KOG1166|consen 766 QNASVLVSEYSPYGTLLDLINTN---KVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKG 839 (974)
T ss_pred CCcceeeeeccccccHHHhhccC---CCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccc
Confidence 78889999999999999999843 5689999999999999999999999 9999999999999952 235
Q ss_pred eEEecccceeecCC--CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCC
Q 005864 546 ARVSDFGIAKFLKP--GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606 (673)
Q Consensus 546 ~kl~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p 606 (673)
++|+|||.+-.+.. +.......++|-.+-++|...+.+.+.+.|-|.++.+++-|+.|+.-
T Consensus 840 l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 840 LYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred eEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 89999999976643 33455677889999999999999999999999999999999999864
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.75 E-value=3.4e-19 Score=179.59 Aligned_cols=174 Identities=25% Similarity=0.399 Sum_probs=137.5
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++.|++|...+|.+|+.........++.....++.|++.|++| + +.+|+|+||.||++..+..+||+|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence 568999999999999999877666778899999999999999999 6 8899999999999999999999999999
Q ss_pred eecCCCC------CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccc
Q 005864 555 KFLKPGS------SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEI 627 (673)
Q Consensus 555 ~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~ 627 (673)
..+.... ...+...||..||+||.+.+..|+.|+||||+|++++|++. =..+++.. ....++
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~-----------~t~~d~ 472 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI-----------ATLTDI 472 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH-----------Hhhhhh
Confidence 8775544 13355679999999999999999999999999999999997 33333322 223333
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 005864 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVC 668 (673)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~ 668 (673)
-+..++. ....+.+ .-+.++.+++.+.|.+||++.++.
T Consensus 473 r~g~ip~--~~~~d~p-~e~~ll~~lls~~p~~RP~~~~~~ 510 (516)
T KOG1033|consen 473 RDGIIPP--EFLQDYP-EEYTLLQQLLSPSPEERPSAIEVA 510 (516)
T ss_pred hcCCCCh--HHhhcCc-HHHHHHHHhcCCCcccCchHHHHh
Confidence 4444441 1222222 234688999999999999665543
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.5e-18 Score=162.32 Aligned_cols=146 Identities=21% Similarity=0.210 Sum_probs=112.7
Q ss_pred cCCCccceeccCCcEEEEEEE--eCCCCEEEEEeeccchhhh---------------------hHHHHHHHHHHHHHhcc
Q 005864 402 KNFDAEQCIGIGGQASVYRGE--LPSGEVVAVKKFHSLLLSE---------------------ISVQREFLNEIKALTEI 458 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~--~~~~~~vavK~~~~~~~~~---------------------~~~~~~~~~e~~~l~~l 458 (673)
.-|++.+.||+|+||.||+|. ..+|+.||+|+++...... ......+..|+..+.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 358889999999999999998 5689999999987542110 00123467899999999
Q ss_pred CCCc--ccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCC-eEEecCCC
Q 005864 459 RHRN--IVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPP-IVHRDISS 535 (673)
Q Consensus 459 ~h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-ivH~dlk~ 535 (673)
.+.. +.+++++ ...++||||++++++....... ..+...+...++.|++.++++||+. + ++||||||
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp 177 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD---VEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSE 177 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCccccccccc---CCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCCh
Confidence 7533 3344443 2358999999998887765332 2345566778999999999999999 8 99999999
Q ss_pred CCeEeCCCCceEEecccceeecC
Q 005864 536 KNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 536 ~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
+||+++ ++.++++|||.+....
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhccC
Confidence 999999 7899999999987543
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.75 E-value=1e-17 Score=158.77 Aligned_cols=148 Identities=18% Similarity=0.173 Sum_probs=114.8
Q ss_pred HHHHHHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhh-------------------HHHHHHHHHHHHH
Q 005864 395 EEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEI-------------------SVQREFLNEIKAL 455 (673)
Q Consensus 395 ~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~-------------------~~~~~~~~e~~~l 455 (673)
.++.+....|.+.+.||+|+||.||+|..++|+.||||++........ .....+..|...+
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 455555556888999999999999999888999999998764321100 1122367789999
Q ss_pred hccCCC--cccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecC
Q 005864 456 TEIRHR--NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDI 533 (673)
Q Consensus 456 ~~l~h~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl 533 (673)
..+.|+ .+.+.++. ...++||||+++++|.+.... .....++.+++.++.++|+. +++||||
T Consensus 88 ~~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl 151 (198)
T cd05144 88 KALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKH---GIIHGDL 151 (198)
T ss_pred HHHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHC---CCCcCCC
Confidence 999877 44444442 345899999999998775431 23456888999999999998 9999999
Q ss_pred CCCCeEeCCCCceEEecccceeecC
Q 005864 534 SSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 534 k~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
+|+||++++++.++|+|||++....
T Consensus 152 ~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 152 SEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CcccEEEcCCCcEEEEECCccccCC
Confidence 9999999999999999999996544
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.6e-17 Score=159.49 Aligned_cols=137 Identities=20% Similarity=0.353 Sum_probs=115.8
Q ss_pred ceeccCCcEEEEEEEeCCCCEEEEEeeccchhh-----hhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 408 QCIGIGGQASVYRGELPSGEVVAVKKFHSLLLS-----EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
+.||+|++|.||+|.. .|..|++|+....... .......+.+|+.++..++|+++.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 7788999976543211 112235688899999999999998888888777888999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++|++|.+++.... + .+..++.+++.++.++|+. +++|+|++|.||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986532 1 7788999999999999999 999999999999999 78899999999864
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=8e-20 Score=156.06 Aligned_cols=158 Identities=34% Similarity=0.511 Sum_probs=98.4
Q ss_pred ccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCC
Q 005864 108 WGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELE 187 (673)
Q Consensus 108 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 187 (673)
+.++.+.+.|.|++|+++ ..|..+..+.+|+.|++++|+|+ .+|..++.++.|+.|+++-|++. ..|..|+.+|.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 334556666667777766 45556666666666777766666 56666666666666666666666 6666666666666
Q ss_pred EEEeCCCCCCC-cCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCc
Q 005864 188 YLDLSTNKLSG-SIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHN 266 (673)
Q Consensus 188 ~L~l~~n~l~~-~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N 266 (673)
.|||+.|++.. .+|..|..++.|+.|+|++|.+. .+|..++++++|+.|.+.+|.+. ..|..++.+..|++|.+.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 66666666632 45556666666666666666665 45556666666666666666655 55555555555555555555
Q ss_pred cccc
Q 005864 267 NLSG 270 (673)
Q Consensus 267 ~l~~ 270 (673)
+++-
T Consensus 184 rl~v 187 (264)
T KOG0617|consen 184 RLTV 187 (264)
T ss_pred eeee
Confidence 5553
|
|
| >KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.8e-19 Score=153.94 Aligned_cols=167 Identities=26% Similarity=0.452 Sum_probs=150.5
Q ss_pred hhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccc
Q 005864 131 EIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKV 210 (673)
Q Consensus 131 ~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 210 (673)
.+..+.+++.|.||+|+++ .+|..++++.+|+.|++.+|+++ .+|..++.+++|+.|+++-|++. ..|..|+.+|.|
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 4556788899999999998 77888999999999999999999 77888999999999999999998 899999999999
Q ss_pred cEEEccCCcCcc-CCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccC
Q 005864 211 HYLNLSNNQFRK-EFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISY 289 (673)
Q Consensus 211 ~~L~l~~n~l~~-~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~ 289 (673)
+.|+|++|++.. ..|..|..+..|+.|+|++|.+. .+|..++.+.+|+.|.+.+|.+-.. |..+..+..|++|++.|
T Consensus 105 evldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll~l-pkeig~lt~lrelhiqg 182 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLLSL-PKEIGDLTRLRELHIQG 182 (264)
T ss_pred hhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchhhC-cHHHHHHHHHHHHhccc
Confidence 999999999874 57888989999999999999998 8999999999999999999998754 88899999999999999
Q ss_pred ccccCCCCCCccc
Q 005864 290 NELLGLIPNSTGF 302 (673)
Q Consensus 290 N~l~~~~~~~~~~ 302 (673)
|+++-.+|.....
T Consensus 183 nrl~vlppel~~l 195 (264)
T KOG0617|consen 183 NRLTVLPPELANL 195 (264)
T ss_pred ceeeecChhhhhh
Confidence 9999888875443
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.8e-17 Score=154.60 Aligned_cols=134 Identities=20% Similarity=0.362 Sum_probs=110.0
Q ss_pred eeccCCcEEEEEEEeCCCCEEEEEeeccchhh-----hhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecc
Q 005864 409 CIGIGGQASVYRGELPSGEVVAVKKFHSLLLS-----EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 409 ~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
.||+|+||.||+|.+ +|..|++|........ ......++.+|++++..++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999985 6788999986542211 1223466889999999999988776666666777789999999
Q ss_pred cCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 484 ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 484 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+|++|.+++.... . .++.++++++.++|+. +++|+|++|.||+++ ++.++++|||++...
T Consensus 80 ~g~~l~~~~~~~~----~------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 80 EGKPLKDVIEEGN----D------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CCccHHHHHhhcH----H------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 9999999875431 0 6889999999999999 999999999999999 789999999998753
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.7e-17 Score=177.75 Aligned_cols=142 Identities=20% Similarity=0.333 Sum_probs=114.2
Q ss_pred HhcCCCccceeccCCcEEEEEEEeCCCCEEEEEe-eccchh----hhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKK-FHSLLL----SEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~-~~~~~~----~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
....|...+.||+|+||+||+|.+.... +++|+ ..+... ......+.+.+|++++..++|++++....++..+.
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 3445567899999999999999875444 34443 222111 11223467889999999999999999888888877
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++||||+++++|.+++. ....++.++++++.|||+. +++|||+||+||++ +++.++|+|||++
T Consensus 410 ~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla 474 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLG 474 (535)
T ss_pred CCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCccc
Confidence 8899999999999999875 3467899999999999999 99999999999999 5779999999999
Q ss_pred eec
Q 005864 555 KFL 557 (673)
Q Consensus 555 ~~~ 557 (673)
+..
T Consensus 475 ~~~ 477 (535)
T PRK09605 475 KYS 477 (535)
T ss_pred ccC
Confidence 753
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.9e-17 Score=178.61 Aligned_cols=206 Identities=23% Similarity=0.303 Sum_probs=144.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|+.++.|..|+||.||..+++ ..+++|.|+ .+... +.+- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l--------ilRn--ilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL--------ILRN--ILTFAGNPFVV---------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcc-cccch--------hhhc--cccccCCccee----------------
Confidence 57889999999999999999886 477888854 22111 1111 33333455444
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|+-...++..+. ++. +++.+++|+|+. +|+|||+||.|.+++.-|.+|+.|||+++..-..
T Consensus 136 -----gDc~tllk~~g~---lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms 196 (1205)
T KOG0606|consen 136 -----GDCATLLKNIGP---LPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMS 196 (1205)
T ss_pred -----chhhhhcccCCC---Ccc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhh
Confidence 444444544332 222 237899999999 9999999999999999999999999998743111
Q ss_pred CC---------------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccc
Q 005864 561 SS---------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625 (673)
Q Consensus 561 ~~---------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 625 (673)
.. .....+||+.|+|||++....|+..+|.|++|+|+||.+.|..||..... ++.+.
T Consensus 197 ~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp--------eelfg 268 (1205)
T KOG0606|consen 197 LATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP--------EELFG 268 (1205)
T ss_pred ccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH--------HHHHh
Confidence 00 12346799999999999999999999999999999999999999874321 22222
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCC
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRP 662 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp 662 (673)
.++.....++.. ....+.+..+++...|+.+|..|-
T Consensus 269 ~visd~i~wpE~-dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 269 QVISDDIEWPEE-DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred hhhhhhcccccc-CcCCCHHHHHHHHHHHHhChHhhc
Confidence 222222222221 223345688999999999999995
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.8e-16 Score=145.12 Aligned_cols=139 Identities=21% Similarity=0.215 Sum_probs=99.4
Q ss_pred cceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHH---------------------HHHHHHHHhccCCCc--c
Q 005864 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQRE---------------------FLNEIKALTEIRHRN--I 463 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~---------------------~~~e~~~l~~l~h~n--i 463 (673)
.+.||+|+||+||+|...+|+.||||++............. ...|...+.++++.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999988889999999886542221111111 135566666664432 3
Q ss_pred cceeeeeecCCeeeEEEecccCCChHHH-HhcCCCCccchHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEeC
Q 005864 464 VKFYGFCSHPRHSFLVYECLERGSLAEI-LSNDGSIKEFSWIVRTNVIKSVANALSYMHH-DCFPPIVHRDISSKNVLLS 541 (673)
Q Consensus 464 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~ 541 (673)
.+.+++ ...++||||++++++... +.... .. .....++.+++.++.++|. . +++|+||+|+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEEE
Confidence 444443 235899999999654321 11111 01 5567899999999999999 7 999999999999999
Q ss_pred CCCceEEecccceeecC
Q 005864 542 SEYEARVSDFGIAKFLK 558 (673)
Q Consensus 542 ~~~~~kl~Dfg~~~~~~ 558 (673)
++.++++|||.+....
T Consensus 150 -~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 -DGKVYIIDVPQAVEID 165 (187)
T ss_pred -CCcEEEEECccccccc
Confidence 8899999999997554
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-15 Score=137.89 Aligned_cols=135 Identities=19% Similarity=0.173 Sum_probs=113.6
Q ss_pred ccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCC--CcccceeeeeecCCeeeEEEecc
Q 005864 406 AEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH--RNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 406 ~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
+++.||+|.++.||++...+ +.+++|....... ...+.+|+..+..++| +++++++++...++..++++||+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~ 75 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI 75 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence 45789999999999998854 7899998765422 4578889999999976 58999999988888899999999
Q ss_pred cCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 484 ERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 484 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
+++.+..+ +......++.+++++++++|.....+++|+|++|+||++++.+.++++|||.+..
T Consensus 76 ~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 76 EGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 99777654 4456677889999999999986444799999999999999989999999999864
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.2e-15 Score=143.32 Aligned_cols=139 Identities=14% Similarity=0.224 Sum_probs=107.6
Q ss_pred cceec-cCCcEEEEEEEeCCCCEEEEEeeccchh----------hhhHHHHHHHHHHHHHhccCCCcc--cceeeeeecC
Q 005864 407 EQCIG-IGGQASVYRGELPSGEVVAVKKFHSLLL----------SEISVQREFLNEIKALTEIRHRNI--VKFYGFCSHP 473 (673)
Q Consensus 407 ~~~ig-~G~~g~vy~~~~~~~~~vavK~~~~~~~----------~~~~~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~~ 473 (673)
...|| .|+.|+||.+... +..++||++..... ........+.+|++++..++|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 46788 9999999999884 78899998854211 011234568889999999998875 6777765432
Q ss_pred C----eeeEEEecccC-CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEE
Q 005864 474 R----HSFLVYECLER-GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARV 548 (673)
Q Consensus 474 ~----~~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 548 (673)
. ..++|+|+++| .+|.+++... .++.. .+.+++.++.+||+. ||+||||||.||+++.++.+++
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEE
Confidence 2 23599999997 6999988653 23332 356899999999999 9999999999999999889999
Q ss_pred ecccceeec
Q 005864 549 SDFGIAKFL 557 (673)
Q Consensus 549 ~Dfg~~~~~ 557 (673)
+|||.+...
T Consensus 184 IDfg~~~~~ 192 (239)
T PRK01723 184 IDFDRGELR 192 (239)
T ss_pred EECCCcccC
Confidence 999998753
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.2e-16 Score=171.22 Aligned_cols=254 Identities=20% Similarity=0.266 Sum_probs=189.9
Q ss_pred cCCCccceeccCCcEEEEEEEeC--CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeeeE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP--SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 478 (673)
..|.+.+.||+|.|+.|-.+... ....+|+|.+.... ...........|..+-..+. |+|++++++...+.+..++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 45778888999999999888553 34456777665443 23344556666888877785 9999999999999999999
Q ss_pred EEecccCCChHHHH-hcCCCCccchHHHHHHHHHHHHHHHHHHh-hcCCCCeEEecCCCCCeEeCCCC-ceEEeccccee
Q 005864 479 VYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSYMH-HDCFPPIVHRDISSKNVLLSSEY-EARVSDFGIAK 555 (673)
Q Consensus 479 v~e~~~~gsL~~~l-~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~ 555 (673)
+.+|.+++++.+.+ +... ...+......++.|+..++.|+| .. ++.|+|+||+|.+++..+ ..+++|||+|.
T Consensus 99 ~~~~s~g~~~f~~i~~~~~--~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDS--TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred ccCcccccccccccccCCc--cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCchhhc
Confidence 99999999999988 4432 23455666778999999999999 77 999999999999999999 99999999998
Q ss_pred ecCC-CCC--Cceeccc-ccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC
Q 005864 556 FLKP-GSS--NWTEFAG-TFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP 630 (673)
Q Consensus 556 ~~~~-~~~--~~~~~~~-~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 630 (673)
.+.. ... ......| ++.|+|||...+. -..+..|+||.|+++..+++|..|++....... ........
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~-------~~~~~~~~ 246 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG-------RYSSWKSN 246 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc-------cceeeccc
Confidence 7755 222 2344567 9999999998874 446789999999999999999999875433221 11111111
Q ss_pred CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 005864 631 RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVC 668 (673)
Q Consensus 631 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~ 668 (673)
+...-...+........++..+++..+|..|.+.+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 247 KGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred ccccccCccccCChhhhhcccccccCCchhcccccccc
Confidence 11101112233334577888899999999999988764
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.3e-13 Score=145.34 Aligned_cols=149 Identities=21% Similarity=0.278 Sum_probs=104.4
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhH-------------------------------------H
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEIS-------------------------------------V 444 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~-------------------------------------~ 444 (673)
..|+ .+.||+|++|.||+|++++|+.||||+.+........ .
T Consensus 118 ~~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 196 (437)
T TIGR01982 118 AEFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR 196 (437)
T ss_pred hhCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence 3444 3689999999999999999999999998654211100 0
Q ss_pred HHHHHHHHHHHhccC-----CCcccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHH-HHH
Q 005864 445 QREFLNEIKALTEIR-----HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVAN-ALS 518 (673)
Q Consensus 445 ~~~~~~e~~~l~~l~-----h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~-~l~ 518 (673)
.-+|..|+..+.+++ ++++.-..-|....+..++||||++|++|.++...... .. .+..++..+++ .+.
T Consensus 197 Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ 271 (437)
T TIGR01982 197 ELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLN 271 (437)
T ss_pred HHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHH
Confidence 012555666666653 33332222222334457999999999999988653211 11 23456666666 467
Q ss_pred HHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 519 YMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 519 ~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
.+|.. |++|+|++|.||+++++++++++|||++..+.+
T Consensus 272 ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 272 QVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 88988 999999999999999999999999999987753
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.49 E-value=3e-15 Score=151.35 Aligned_cols=173 Identities=34% Similarity=0.512 Sum_probs=96.3
Q ss_pred cEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCC
Q 005864 115 GTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTN 194 (673)
Q Consensus 115 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n 194 (673)
...+|+.|++. .+|..+..+-.|+.+.|+.|.+. .+|..++++..|++|+|+.|+++ .+|..++.++ |+.|.+++|
T Consensus 78 ~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNN 153 (722)
T KOG0532|consen 78 VFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNN 153 (722)
T ss_pred hhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecC
Confidence 34555555555 45555555555555555555554 55555555555555555555555 4555555554 555555555
Q ss_pred CCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCcc
Q 005864 195 KLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPS 274 (673)
Q Consensus 195 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 274 (673)
+++ .+|..++..+.|..|+.+.|.+.. +|..++.+.+|+.|++..|++. .+|..++.+ .|..||+|.|+++.+ |-
T Consensus 154 kl~-~lp~~ig~~~tl~~ld~s~nei~s-lpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis~i-Pv 228 (722)
T KOG0532|consen 154 KLT-SLPEEIGLLPTLAHLDVSKNEIQS-LPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKISYL-PV 228 (722)
T ss_pred ccc-cCCcccccchhHHHhhhhhhhhhh-chHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCceeec-ch
Confidence 555 555555555555555666555552 4455555555566666666555 445455533 455556666655533 55
Q ss_pred ccccCCCccEEEccCccccCCC
Q 005864 275 CFEGMHGLSCIDISYNELLGLI 296 (673)
Q Consensus 275 ~~~~~~~L~~l~l~~N~l~~~~ 296 (673)
.|..|..|++|-|.+|+|+..+
T Consensus 229 ~fr~m~~Lq~l~LenNPLqSPP 250 (722)
T KOG0532|consen 229 DFRKMRHLQVLQLENNPLQSPP 250 (722)
T ss_pred hhhhhhhheeeeeccCCCCCCh
Confidence 5556666666666666655443
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.1e-13 Score=150.63 Aligned_cols=118 Identities=31% Similarity=0.540 Sum_probs=102.2
Q ss_pred cccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEcc
Q 005864 209 KVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDIS 288 (673)
Q Consensus 209 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~ 288 (673)
.++.|+|++|.+++.+|..+..+++|+.|+|++|.+.+.+|..++.+++|+.|+|++|++++.+|..+..+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCccc--ccCccccccCCcCCCCCCCCCcccc
Q 005864 289 YNELLGLIPNSTGF--QYDPIQALRGNRGLCGDVEGFQSCK 327 (673)
Q Consensus 289 ~N~l~~~~~~~~~~--~~~~~~~~~~n~~~c~~~~~~~~~~ 327 (673)
+|+++|.+|..... .......+.+|+.+|+.+ ....|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p-~l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP-GLRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCC-CCCCCc
Confidence 99999999875432 223356788999999865 345675
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.2e-13 Score=142.85 Aligned_cols=248 Identities=25% Similarity=0.273 Sum_probs=184.8
Q ss_pred CCCccceecc--CCcEEEEEEEe---CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCee
Q 005864 403 NFDAEQCIGI--GGQASVYRGEL---PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 403 ~~~~~~~ig~--G~~g~vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~ 476 (673)
.|.....+|. |.+|.||.+.. .++..+|+|+-+....... ....=.+|+.....++ |++.++.+..+...+..
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~-~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPL-DSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCcc-ccccccchhhcccccCccccccccCcccccCCcc
Confidence 4566788999 99999999965 4688999998654433221 2233346777777774 99999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHH----HHHHHhhcCCCCeEEecCCCCCeEeCCC-CceEEecc
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVAN----ALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDF 551 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~----~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Df 551 (673)
++-+|++. .+|.++.+... ..++....+.+..+..+ |+.++|.. +++|-|+||.||+..++ ...+++||
T Consensus 194 fiqtE~~~-~sl~~~~~~~~--~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 194 FIQTELCG-ESLQSYCHTPC--NFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeeecccc-chhHHhhhccc--ccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCc
Confidence 99999886 58888877653 34666777888888888 99999999 99999999999999999 88999999
Q ss_pred cceeecCCCCCCce-----ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccc
Q 005864 552 GIAKFLKPGSSNWT-----EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNE 626 (673)
Q Consensus 552 g~~~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 626 (673)
|+...+..+.-... ...+...|++||...+ -++..+|+|++|.++.+-.++..+...-. ...|.+
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~---------~~~W~~ 337 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGK---------NSSWSQ 337 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCC---------CCCccc
Confidence 99998866542221 2257788999998644 57889999999999999999887744210 001111
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 627 ILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+++.+ .+.++......++...+..+++.+|-.|++.+.+..
T Consensus 338 -~r~~~-ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 338 -LRQGY-IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred -ccccc-CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 11111 222333334445666899999999999999988764
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.4e-13 Score=128.87 Aligned_cols=202 Identities=21% Similarity=0.306 Sum_probs=138.5
Q ss_pred HHHHhccCCCcccceeeeeecCC-----eeeEEEecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCC
Q 005864 452 IKALTEIRHRNIVKFYGFCSHPR-----HSFLVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCF 525 (673)
Q Consensus 452 ~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~ 525 (673)
..-+-++.|-|+|+++.|+.+.. ...+++|||..|++.++|++.+ ....+....-.+|+.||..||.|||+. .
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~ 196 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-D 196 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-C
Confidence 44555667999999999996543 4678999999999999998643 234566677778999999999999985 5
Q ss_pred CCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC----CceecccccccccccccccCCcCcchhHHHHHHHHHHHH
Q 005864 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS----NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI 601 (673)
Q Consensus 526 ~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~ 601 (673)
|+|+|+++.-+-|++..++-+|++--.-......-.. ......+-++|.|||+=.....+.++|||+||....||.
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 7999999999999999998888753211111000000 011233568999999877777888999999999999999
Q ss_pred hCCCCC-cccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 602 KGKHPR-DFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 602 ~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+..-- ...+.. ..++.....+..--.. . =..++.+|++..|..||+|++++.
T Consensus 277 ilEiq~tnseS~~-----~~ee~ia~~i~~len~----l------qr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 277 ILEIQSTNSESKV-----EVEENIANVIIGLENG----L------QRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred HheeccCCCccee-----ehhhhhhhheeeccCc----c------ccCcCcccccCCCCCCcchhhhhc
Confidence 876541 111110 0111111111111010 0 124678999999999999998763
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.2e-12 Score=137.33 Aligned_cols=147 Identities=19% Similarity=0.248 Sum_probs=96.3
Q ss_pred hcCCCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhhh---------------------------h----HHHH--
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSE---------------------------I----SVQR-- 446 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~---------------------------~----~~~~-- 446 (673)
...|+. +.||+|++|.||+|++++ |+.||||+.++..... . +..+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 456776 789999999999999987 9999999997542110 0 1111
Q ss_pred ----HHHHHHHHHhccC----CCcccceeeeee-cCCeeeEEEecccCCChHHH--HhcCC-CCccchHHHHHHHHHHHH
Q 005864 447 ----EFLNEIKALTEIR----HRNIVKFYGFCS-HPRHSFLVYECLERGSLAEI--LSNDG-SIKEFSWIVRTNVIKSVA 514 (673)
Q Consensus 447 ----~~~~e~~~l~~l~----h~niv~l~~~~~-~~~~~~lv~e~~~~gsL~~~--l~~~~-~~~~l~~~~~~~i~~~i~ 514 (673)
+|.+|+..+.+++ +...+.+-.++. .....++||||++|+.+.++ +...+ ....+.......++.|+.
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif 277 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVF 277 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 2344554444442 333333222222 23456899999999999875 33222 111233333333444443
Q ss_pred HHHHHHhhcCCCCeEEecCCCCCeEeCCCC----ceEEecccceeecC
Q 005864 515 NALSYMHHDCFPPIVHRDISSKNVLLSSEY----EARVSDFGIAKFLK 558 (673)
Q Consensus 515 ~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg~~~~~~ 558 (673)
.. |++|+|++|.||+++.++ +++++|||++..+.
T Consensus 278 -------~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 278 -------RD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred -------hC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 45 999999999999999888 99999999998764
|
|
| >KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.1e-14 Score=147.29 Aligned_cols=213 Identities=30% Similarity=0.398 Sum_probs=166.7
Q ss_pred EEccCccccccccccc-CCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhcccccccccccccc
Q 005864 69 VHLEQNHLTGNISEVF-GIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQ 147 (673)
Q Consensus 69 L~L~~n~i~~~~~~~~-~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 147 (673)
|.|++-++..-+...+ -.+..-...||+.|++. ..+..++.+..|+.+.|..|.+. .+|.++.++..|+.|||+.|+
T Consensus 55 l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~Nq 132 (722)
T KOG0532|consen 55 LLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQ 132 (722)
T ss_pred cccccchhhcCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccch
Confidence 3444444443333333 23445567888899887 56777788888999999999988 788899999999999999999
Q ss_pred ccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchh
Q 005864 148 IVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVE 227 (673)
Q Consensus 148 i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~ 227 (673)
+. ..|..++.|+ |+.|-+++|+++ .+|+.++.++.|..|+.+.|.+. .+|..+..+.+|+.|++..|++.. .|..
T Consensus 133 lS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~-lp~E 207 (722)
T KOG0532|consen 133 LS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLED-LPEE 207 (722)
T ss_pred hh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhh-CCHH
Confidence 97 7888888775 889999999999 77888888889999999999998 778888999999999999999984 6667
Q ss_pred hhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCcccccc---CCCccEEEccCcc
Q 005864 228 LEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEG---MHGLSCIDISYNE 291 (673)
Q Consensus 228 ~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~---~~~L~~l~l~~N~ 291 (673)
+..| .|..||+|.|++. .+|-.|.+|..|++|-|.+|.+... |..+.- ..=.|+|+..-++
T Consensus 208 l~~L-pLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLqSP-PAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 208 LCSL-PLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQSP-PAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred HhCC-ceeeeecccCcee-ecchhhhhhhhheeeeeccCCCCCC-hHHHHhccceeeeeeecchhcc
Confidence 7755 7899999999998 8899999999999999999999744 433322 2233566666554
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.8e-13 Score=142.22 Aligned_cols=198 Identities=34% Similarity=0.488 Sum_probs=108.9
Q ss_pred EEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCC-CCccEEEccCCccccccccCccccCCCcEEEcccC
Q 005864 44 NLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIY-PNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMN 122 (673)
Q Consensus 44 ~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l-~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 122 (673)
.|+++.|.+. .....+..++.++.|++.+|.++.+.+ ....+ ++|+.|++++|++..+ +..+..+++|+.|+++.|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~~i~~-~~~~~~~nL~~L~l~~N~i~~l-~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNITDIPP-LIGLLKSNLKELDLSDNKIESL-PSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccccCcc-ccccchhhcccccccccchhhh-hhhhhccccccccccCCc
Confidence 4555555553 122234444556666666666664432 22333 2566666666666522 244556666666666666
Q ss_pred ccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCc
Q 005864 123 NITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPE 202 (673)
Q Consensus 123 ~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~ 202 (673)
+++ .++...+.+++|+.|++++|++. .+|.....+..|++|.+++|.+. ..+..+.++.++..+.+.+|++. ..+.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccc
Confidence 666 34444445566666666666665 44443333444666666666433 33444556666666666666665 3345
Q ss_pred cccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcc
Q 005864 203 TLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPP 250 (673)
Q Consensus 203 ~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~ 250 (673)
.+..+++++.|++++|.++.... +..+.+++.|++++|.+....+.
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCccccccchh
Confidence 55666666666666666664333 55666666666666666644443
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.6e-14 Score=135.08 Aligned_cols=247 Identities=23% Similarity=0.325 Sum_probs=161.3
Q ss_pred ccCCCCCCEEEcccCcccc----ccCccccCCCCCcEEEccCcccc---cc-------cccccCCCCCccEEEccCCccc
Q 005864 36 IGNLMQLTNLEIDNNQLFG----QIPRSLRNLASLNRVHLEQNHLT---GN-------ISEVFGIYPNLTFLDISHNNFY 101 (673)
Q Consensus 36 ~~~l~~L~~L~L~~n~i~~----~~~~~l~~l~~L~~L~L~~n~i~---~~-------~~~~~~~l~~L~~L~L~~n~i~ 101 (673)
+..+..++.|+|++|-+.. .+...+.+.++|+..++++--.+ .. ...++...|+|++||||+|-+.
T Consensus 26 ~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G 105 (382)
T KOG1909|consen 26 LEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFG 105 (382)
T ss_pred hcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccC
Confidence 4456677777777777653 23345566677777777653211 11 1233445566777777777665
Q ss_pred cccccCc----cccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCcccccc--
Q 005864 102 GEIWSSW----GKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN-- 175 (673)
Q Consensus 102 ~~~~~~~----~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~-- 175 (673)
...+..| .++..|++|.|.+|.+...-...++. .|..|. .|+ ....-+.|+.+...+|++...
T Consensus 106 ~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~k-------k~~~~~~Lrv~i~~rNrlen~ga 174 (382)
T KOG1909|consen 106 PKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNK-------KAASKPKLRVFICGRNRLENGGA 174 (382)
T ss_pred ccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHh-------ccCCCcceEEEEeeccccccccH
Confidence 4443332 34556666666666665332222222 222222 111 123447899999999998743
Q ss_pred --CCccccCCCCCCEEEeCCCCCCC----cCCccccccccccEEEccCCcCccC----CchhhhcccCCCeEeecCCcCC
Q 005864 176 --LPRVLGSLSELEYLDLSTNKLSG----SIPETLGNLLKVHYLNLSNNQFRKE----FPVELEKLVQLSELDLSHNFLG 245 (673)
Q Consensus 176 --~~~~l~~l~~L~~L~l~~n~l~~----~~~~~l~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~ls~N~l~ 245 (673)
+...|...+.|+.+.++.|.+.. .+...|..+++|+.|||.+|.++.. ....++.+++|+.|++++|.+.
T Consensus 175 ~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~ 254 (382)
T KOG1909|consen 175 TALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLE 254 (382)
T ss_pred HHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccc
Confidence 23356677899999999998852 2234677899999999999998754 3445777889999999999998
Q ss_pred CCCccccc-----CCCcccEEEecCcccccc----CccccccCCCccEEEccCcccc
Q 005864 246 GEIPPQIC-----NLESLEKLNVSHNNLSGL----IPSCFEGMHGLSCIDISYNELL 293 (673)
Q Consensus 246 ~~~~~~~~-----~l~~L~~L~l~~N~l~~~----~~~~~~~~~~L~~l~l~~N~l~ 293 (673)
.....+|. ..++|+.|.+.+|.++.. +..+....|.|..|+|++|.+.
T Consensus 255 ~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 255 NEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred cccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 76554442 368999999999998743 3345667899999999999874
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.38 E-value=7e-12 Score=130.84 Aligned_cols=167 Identities=19% Similarity=0.240 Sum_probs=127.4
Q ss_pred EeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccc
Q 005864 422 ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEF 501 (673)
Q Consensus 422 ~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l 501 (673)
+..++.+|.|..++.... .......+.++.++.+|||||+++++.+..++..|+|+|-+. .|..++++.+
T Consensus 33 ~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~----- 102 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG----- 102 (690)
T ss_pred eeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH-----
Confidence 334688888887765432 345667788999999999999999999999999999999874 5666666543
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCceeccccccccccccccc
Q 005864 502 SWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT 581 (673)
Q Consensus 502 ~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~ 581 (673)
.....-.+.||+.||.|||+.| +++|+++.-..|++++.|+.||++|.++..............---.|..|+.+..
T Consensus 103 -~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 103 -KEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred -HHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCc
Confidence 3444556789999999999776 8999999999999999999999999998765433222222222335677775432
Q ss_pred CCcCcchhHHHHHHHHHHHHhC
Q 005864 582 MKVTEKCDVYSFGVLALEVIKG 603 (673)
Q Consensus 582 ~~~~~~~Dv~slG~il~el~~g 603 (673)
.. -..|.|.||++++|++.|
T Consensus 180 s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 180 SE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cc--cchhhhhHHHHHHHHhCc
Confidence 22 346999999999999998
|
|
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.37 E-value=8.1e-14 Score=136.97 Aligned_cols=209 Identities=22% Similarity=0.243 Sum_probs=111.2
Q ss_pred CCCCCCEEEcccCccccccC-ccccCCCCCcEEEccCcccccc--cccccCCCCCccEEEccCCcccccccc-CccccCC
Q 005864 38 NLMQLTNLEIDNNQLFGQIP-RSLRNLASLNRVHLEQNHLTGN--ISEVFGIYPNLTFLDISHNNFYGEIWS-SWGKCQQ 113 (673)
Q Consensus 38 ~l~~L~~L~L~~n~i~~~~~-~~l~~l~~L~~L~L~~n~i~~~--~~~~~~~l~~L~~L~L~~n~i~~~~~~-~~~~l~~ 113 (673)
++.+|+...|.++.+....- .....|++++.|||+.|-+... .......+|+|+.|+|+.|++...... .-..+++
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 34556666666665542111 2455566666666666655522 223445566666666666665421111 1113456
Q ss_pred CcEEEcccCccCcc-CChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCC-ccccCCCCCCEEEe
Q 005864 114 LGTLNFSMNNITGS-IPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLP-RVLGSLSELEYLDL 191 (673)
Q Consensus 114 L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~l 191 (673)
|+.|.|+.|+++.- +...+..+|+|+.|+|..|............+..|+.|+|++|++-.... .....++.|+.|++
T Consensus 199 lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnl 278 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNL 278 (505)
T ss_pred hheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhc
Confidence 66666666666621 12233456666666666664322333333445566666777666653221 23455666666666
Q ss_pred CCCCCCCc-CCcc-----ccccccccEEEccCCcCccC-CchhhhcccCCCeEeecCCcCCC
Q 005864 192 STNKLSGS-IPET-----LGNLLKVHYLNLSNNQFRKE-FPVELEKLVQLSELDLSHNFLGG 246 (673)
Q Consensus 192 ~~n~l~~~-~~~~-----l~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~ls~N~l~~ 246 (673)
+.+.+.+. .|+. ...+++|++|+++.|+|..- .-..+..+++|+.|.+..|.+..
T Consensus 279 s~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 279 SSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred cccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 66666532 2222 23456777777777777531 12234445667777777777764
|
|
| >COG4886 Leucine-rich repeat (LRR) protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.37 E-value=8.2e-13 Score=139.71 Aligned_cols=199 Identities=39% Similarity=0.530 Sum_probs=138.2
Q ss_pred EEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccc-cccccccccccccccCCccccCCCCCCEEEccCc
Q 005864 92 FLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLY-QLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGN 170 (673)
Q Consensus 92 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~-~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n 170 (673)
.|+++.|.+. .....+..++.++.|++.+|.++ .++.....+. +|+.|++++|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 5666666653 12233444567777777777777 4555555553 7888888888776 45556677788888888888
Q ss_pred cccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcc
Q 005864 171 KLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPP 250 (673)
Q Consensus 171 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~ 250 (673)
+++ .++......++|+.|++++|++. .+|........|++|.+++|.+. ..+..+..+.++..+.+.+|++. ..+.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccc
Confidence 887 44444446777888888888887 55655445556788888888543 35556777777777778888776 4466
Q ss_pred cccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCC
Q 005864 251 QICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNS 299 (673)
Q Consensus 251 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~ 299 (673)
.+..+++++.|++++|.++.... +..+.+++.|++++|.+...+|..
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCccccccchhh
Confidence 67777888888888888876644 777888888888888887776653
|
|
| >KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.36 E-value=4.8e-14 Score=134.96 Aligned_cols=240 Identities=20% Similarity=0.263 Sum_probs=141.1
Q ss_pred CcccCCCCCCEEEeeCCccccC----CCccccCCCCCCEEEcccC---ccccccC-------ccccCCCCCcEEEccCcc
Q 005864 10 PSVGNFTNLKGLYLYSNSLSGS----VPGEIGNLMQLTNLEIDNN---QLFGQIP-------RSLRNLASLNRVHLEQNH 75 (673)
Q Consensus 10 ~~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n---~i~~~~~-------~~l~~l~~L~~L~L~~n~ 75 (673)
+.+..+..++.|+||+|.+... +.+.+++.++|+..++++- ++...+| .++..+++|++|+||+|-
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA 103 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNA 103 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccc
Confidence 3455678899999999999743 4455778899999999984 2333344 456677899999999999
Q ss_pred cccccc----cccCCCCCccEEEccCCccccccccCcc-------------ccCCCcEEEcccCccCccCChhhhccccc
Q 005864 76 LTGNIS----EVFGIYPNLTFLDISHNNFYGEIWSSWG-------------KCQQLGTLNFSMNNITGSIPPEIGKLYQL 138 (673)
Q Consensus 76 i~~~~~----~~~~~l~~L~~L~L~~n~i~~~~~~~~~-------------~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 138 (673)
++.... ..++.+.+|++|.|.+|.+.......++ .-+.|+++...+|++.......
T Consensus 104 ~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~------- 176 (382)
T KOG1909|consen 104 FGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATA------- 176 (382)
T ss_pred cCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHH-------
Confidence 984443 3457789999999999998754433322 2345555555555555321111
Q ss_pred cccccccccccccCCccccCCCCCCEEEccCccccc----cCCccccCCCCCCEEEeCCCCCCC----cCCccccccccc
Q 005864 139 HKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSG----NLPRVLGSLSELEYLDLSTNKLSG----SIPETLGNLLKV 210 (673)
Q Consensus 139 ~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~----~~~~~l~~l~~L~~L~l~~n~l~~----~~~~~l~~l~~L 210 (673)
+...|...+.|+.+.++.|.|.. .+...|..+++|+.|||..|.++. .+...+..++.|
T Consensus 177 -------------~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L 243 (382)
T KOG1909|consen 177 -------------LAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHL 243 (382)
T ss_pred -------------HHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchh
Confidence 11223333444444444444431 111234445555555555555532 122334445555
Q ss_pred cEEEccCCcCccCCchhh-----hcccCCCeEeecCCcCCCCC----cccccCCCcccEEEecCcccc
Q 005864 211 HYLNLSNNQFRKEFPVEL-----EKLVQLSELDLSHNFLGGEI----PPQICNLESLEKLNVSHNNLS 269 (673)
Q Consensus 211 ~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~ls~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~ 269 (673)
+.|++++|.++......| ...++|+.|.+.+|.++..- .......+.|+.|+|++|++.
T Consensus 244 ~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 244 RELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred eeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 566666655554433332 12456666666666665321 122344677777777777773
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.4e-13 Score=126.05 Aligned_cols=133 Identities=24% Similarity=0.304 Sum_probs=78.3
Q ss_pred CCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEe
Q 005864 159 LKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELD 238 (673)
Q Consensus 159 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 238 (673)
...|++|+|++|.|+ .+.+...-.|.++.|++|.|.+. .+ ..++.+++|+.||||+|.++. ...+-..+-++++|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v-~nLa~L~~L~~LDLS~N~Ls~-~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TV-QNLAELPQLQLLDLSGNLLAE-CVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEecccccee-ee-hhhhhcccceEeecccchhHh-hhhhHhhhcCEeeee
Confidence 345566666666665 33334444556666666666665 22 225556666666666666653 223334455666666
Q ss_pred ecCCcCCCCCcccccCCCcccEEEecCccccccC-ccccccCCCccEEEccCccccCCCC
Q 005864 239 LSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLI-PSCFEGMHGLSCIDISYNELLGLIP 297 (673)
Q Consensus 239 ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~~~~L~~l~l~~N~l~~~~~ 297 (673)
|+.|.|.+ -..+..+-+|..||+++|+|.... ...++++|.|+++.|.+|++.+.+.
T Consensus 359 La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 359 LAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred hhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 66666642 234556666777777777765432 2456777888888888888877653
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.3e-12 Score=116.60 Aligned_cols=131 Identities=19% Similarity=0.145 Sum_probs=96.6
Q ss_pred cceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCccc-ceeeeeecCCeeeEEEecccC
Q 005864 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIV-KFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~ 485 (673)
.+.++.|.++.||+++.. |+.|++|....... ....+..|+.++..+.+.+++ +++++.. ...++||||++|
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~----~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G 75 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE----LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEG 75 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc----cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCC
Confidence 367899999999999874 78899998754321 123457889999988655544 4544432 345799999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcC--CCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDC--FPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~--~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
.++.+. . .....++.+++++++.||+.. ..+++|+|++|.||+++ ++.++++|||.+..
T Consensus 76 ~~l~~~--~---------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 76 SELLTE--D---------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred Cccccc--c---------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 887653 0 011235678999999999982 12359999999999999 66899999999863
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
| >KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.9e-13 Score=132.22 Aligned_cols=209 Identities=21% Similarity=0.222 Sum_probs=115.8
Q ss_pred cCCCCCCEEEeeCCccccCCC--ccccCCCCCCEEEcccCccccc--cCccccCCCCCcEEEccCcccc-cccccccCCC
Q 005864 13 GNFTNLKGLYLYSNSLSGSVP--GEIGNLMQLTNLEIDNNQLFGQ--IPRSLRNLASLNRVHLEQNHLT-GNISEVFGIY 87 (673)
Q Consensus 13 ~~l~~L~~L~L~~n~i~~~~~--~~~~~l~~L~~L~L~~n~i~~~--~~~~l~~l~~L~~L~L~~n~i~-~~~~~~~~~l 87 (673)
+++++|+.+.|.++.+. ..+ .....|++++.|||+.|-+... +..-...|++|+.|+|+.|++. ......-..+
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l 196 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLL 196 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhh
Confidence 35566666777776666 222 2455667777777777655431 2233455667777777777665 1222222345
Q ss_pred CCccEEEccCCcccccc-ccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccC-CccccCCCCCCEE
Q 005864 88 PNLTFLDISHNNFYGEI-WSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEI-PIELGNLKSLNYL 165 (673)
Q Consensus 88 ~~L~~L~L~~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~-~~~l~~l~~L~~L 165 (673)
++|+.|.|+.|.++... ......+++|+.|+|..|....+......-++.|++|||++|.+.... ....+.++.|+.|
T Consensus 197 ~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~L 276 (505)
T KOG3207|consen 197 SHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQL 276 (505)
T ss_pred hhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhh
Confidence 66777777777665311 122334567777777776433233334445566777777777665221 1345566677777
Q ss_pred EccCcccccc-CCcc-----ccCCCCCCEEEeCCCCCCCc-CCccccccccccEEEccCCcCcc
Q 005864 166 VLNGNKLSGN-LPRV-----LGSLSELEYLDLSTNKLSGS-IPETLGNLLKVHYLNLSNNQFRK 222 (673)
Q Consensus 166 ~L~~n~l~~~-~~~~-----l~~l~~L~~L~l~~n~l~~~-~~~~l~~l~~L~~L~l~~n~l~~ 222 (673)
+++.|.++.. .|+. ...+++|++|+++.|++.+. .-..+..+++|+.|.+..|.+..
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 7777766642 1222 24456777777777776421 12234445566666666666654
|
|
| >KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.29 E-value=4.9e-13 Score=125.01 Aligned_cols=226 Identities=24% Similarity=0.239 Sum_probs=152.4
Q ss_pred CCCCCEEEcccC--------ccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccc
Q 005864 39 LMQLTNLEIDNN--------QLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGK 110 (673)
Q Consensus 39 l~~L~~L~L~~n--------~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 110 (673)
+.+|..|.++.. -+....|..+.-+++|.++.++.+.-..+. +....-|.|+.+.+.+..++.. ..+-.
T Consensus 181 ~~~l~~l~vs~~~~p~~~sni~~~~l~f~l~~f~~l~~~~~s~~~~~~i~-~~~~~kptl~t~~v~~s~~~~~--~~l~p 257 (490)
T KOG1259|consen 181 CTQLVALVVTPVKDPIDRSNIIPNRLSFNLNAFRNLKTLKFSALSTENIV-DIELLKPTLQTICVHNTTIQDV--PSLLP 257 (490)
T ss_pred hhheeEEEecCCCCCCccccccccccccchHHhhhhheeeeeccchhhee-ceeecCchhheeeeeccccccc--ccccc
Confidence 457777777653 222334445555667777777766544222 2223346777777776655421 11111
Q ss_pred cCCCcEEEccc-CccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEE
Q 005864 111 CQQLGTLNFSM-NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYL 189 (673)
Q Consensus 111 l~~L~~L~L~~-n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 189 (673)
...+..+.... .-.+|.........+.|++||||+|.|+ .+..+..-+|.++.|+++.|.+... +.+..+++|+.|
T Consensus 258 e~~~~D~~~~E~~t~~G~~~~~~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~L 334 (490)
T KOG1259|consen 258 ETILADPSGSEPSTSNGSALVSADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLL 334 (490)
T ss_pred hhhhcCccCCCCCccCCceEEecchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEe
Confidence 12222222111 1122223333445678999999999998 5566667779999999999999833 348889999999
Q ss_pred EeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCC-CcccccCCCcccEEEecCccc
Q 005864 190 DLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGE-IPPQICNLESLEKLNVSHNNL 268 (673)
Q Consensus 190 ~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~-~~~~~~~l~~L~~L~l~~N~l 268 (673)
|||+|.++ .+..+=.++-+++.|.|+.|.|.+ ...+..+-+|..||+++|+|... -...++++|-|+.+.|.+|.+
T Consensus 335 DLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl 411 (490)
T KOG1259|consen 335 DLSGNLLA-ECVGWHLKLGNIKTLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPL 411 (490)
T ss_pred ecccchhH-hhhhhHhhhcCEeeeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCc
Confidence 99999998 555555678899999999999874 34677888999999999999742 234688999999999999999
Q ss_pred cccCc
Q 005864 269 SGLIP 273 (673)
Q Consensus 269 ~~~~~ 273 (673)
.+...
T Consensus 412 ~~~vd 416 (490)
T KOG1259|consen 412 AGSVD 416 (490)
T ss_pred cccch
Confidence 87643
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.27 E-value=3.4e-12 Score=115.19 Aligned_cols=108 Identities=25% Similarity=0.299 Sum_probs=32.0
Q ss_pred CCCCCCEEEeeCCccccCCCcccc-CCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccE
Q 005864 14 NFTNLKGLYLYSNSLSGSVPGEIG-NLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTF 92 (673)
Q Consensus 14 ~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 92 (673)
+...+++|+|++|.|+.+ ..++ .+.+|+.|+|++|.|+.. +.+..++.|++|++++|+|+.+.......+|+|++
T Consensus 17 n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~ 92 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQE 92 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT--E
T ss_pred cccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcCCE
Confidence 334567777777777733 2344 466777777777777632 24666677777777777777554333345667777
Q ss_pred EEccCCcccccc-ccCccccCCCcEEEcccCccC
Q 005864 93 LDISHNNFYGEI-WSSWGKCQQLGTLNFSMNNIT 125 (673)
Q Consensus 93 L~L~~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~ 125 (673)
|+|++|+|.... ...++.+++|+.|+|.+|.++
T Consensus 93 L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 93 LYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp EE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred EECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 777777765422 234455666666666666655
|
|
| >cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain | Back alignment and domain information |
|---|
Probab=99.26 E-value=9.3e-11 Score=108.14 Aligned_cols=139 Identities=17% Similarity=0.207 Sum_probs=100.4
Q ss_pred ceeccCCcEEEEEEEeCC-------CCEEEEEeeccchhh----------h---------hHHHHHHH----HHHHHHhc
Q 005864 408 QCIGIGGQASVYRGELPS-------GEVVAVKKFHSLLLS----------E---------ISVQREFL----NEIKALTE 457 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~-------~~~vavK~~~~~~~~----------~---------~~~~~~~~----~e~~~l~~ 457 (673)
.+||.|--+.||.|...+ +..+|||+++..... + ....+.+. +|+..|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 579999999999996543 579999988532210 0 11223333 89999999
Q ss_pred cCC--CcccceeeeeecCCeeeEEEecccCCChHH-HHhcCCCCccchHHHHHHHHHHHHHHHHHH-hhcCCCCeEEecC
Q 005864 458 IRH--RNIVKFYGFCSHPRHSFLVYECLERGSLAE-ILSNDGSIKEFSWIVRTNVIKSVANALSYM-HHDCFPPIVHRDI 533 (673)
Q Consensus 458 l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~i~~~l~~L-H~~~~~~ivH~dl 533 (673)
++. -++.+++++ ...++||||+.++.+.. .++. ..++..+...+..+++.+|..+ |+. ++|||||
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd----~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGDL 151 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD----AKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHADL 151 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc----cccCHHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 953 456666654 45789999998754422 2222 1234455667889999999999 788 9999999
Q ss_pred CCCCeEeCCCCceEEecccceeecC
Q 005864 534 SSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 534 k~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
+++||+++ ++.+.++|||.+....
T Consensus 152 s~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 152 SEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CHHHEEEE-CCcEEEEECCCceeCC
Confidence 99999997 4689999999987654
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown. |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.25 E-value=5.7e-12 Score=130.47 Aligned_cols=249 Identities=19% Similarity=0.162 Sum_probs=179.7
Q ss_pred HHHhcCCCccceeccCCcEEEEEEEe--CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCC
Q 005864 398 IRATKNFDAEQCIGIGGQASVYRGEL--PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPR 474 (673)
Q Consensus 398 ~~~~~~~~~~~~ig~G~~g~vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 474 (673)
.....+|..+..||.|.|+.|+.... .++..|++|.+........+.. .-..|+.+...+ -|.++++....|...+
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di-~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDI-FSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhh-cchhhhhHhhHhhcccccCCCCCCccccc
Confidence 34456888999999999999999843 4788999998876554433322 234566666666 5999999998888888
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-CceEEecccc
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFGI 553 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~ 553 (673)
..++--||++++++.....-. ..++...++++..|++.++.++|+. .++|+|++|+||++..+ +..+++|||.
T Consensus 340 ~~~ip~e~~~~~s~~l~~~~~---~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~~ 413 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSVTS---QMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFGC 413 (524)
T ss_pred cccCchhhhcCcchhhhhHHH---HhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcccccc
Confidence 888999999999887766322 3467777888999999999999998 99999999999999876 7889999999
Q ss_pred eeecCCCCCCceeccccccc-ccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCC
Q 005864 554 AKFLKPGSSNWTEFAGTFGY-VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRL 632 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y-~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (673)
+..+.-. .......+..| .+|+......+..+.|+||||.-+.|.++|..--.. ...+..+..+..
T Consensus 414 ~t~~~~~--~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~-----------~~~~~~i~~~~~ 480 (524)
T KOG0601|consen 414 WTRLAFS--SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES-----------GVQSLTIRSGDT 480 (524)
T ss_pred cccccee--cccccccccccccchhhccccccccccccccccccccccccCcccCcc-----------cccceeeecccc
Confidence 8643211 11111122334 366666778889999999999999999987764221 112222333333
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
+-... ....+..+.+.+..+++..||.+.+....
T Consensus 481 p~~~~----~~~~~q~~~kv~~~~~~~~~~l~~~l~~~ 514 (524)
T KOG0601|consen 481 PNLPG----LKLQLQVLLKVMINPDRKRRPSAVELSLH 514 (524)
T ss_pred cCCCc----hHHhhhhhhhhhcCCccccchhhhhhccc
Confidence 22111 11456778888999999999999887644
|
|
| >KOG3087 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.2e-10 Score=102.24 Aligned_cols=146 Identities=18% Similarity=0.280 Sum_probs=112.4
Q ss_pred ccceeccCCcEEEEEEEeCCCCEEEEEe-----eccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 406 AEQCIGIGGQASVYRGELPSGEVVAVKK-----FHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 406 ~~~~ig~G~~g~vy~~~~~~~~~vavK~-----~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
....+-+|+-+.|+++.+ +|+.+.||. +..+..+..-..++..+|+..+.+++--.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 457889999999999988 577766663 23333334445677889999999998777776666777777788999
Q ss_pred ecccC-CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC---ceEEecccceee
Q 005864 481 ECLER-GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY---EARVSDFGIAKF 556 (673)
Q Consensus 481 e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfg~~~~ 556 (673)
||++| .++.+++........ ........+..|-+.+.-||.. +|+|+||..+||++.+++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~-~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDES-EDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcc-cchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99987 588888876543222 2233367888999999999999 999999999999997664 358999999864
|
|
| >COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1e-10 Score=103.49 Aligned_cols=134 Identities=24% Similarity=0.368 Sum_probs=105.4
Q ss_pred ceeccCCcEEEEEEEeCCCCEEEEEeec-c----chhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 408 QCIGIGGQASVYRGELPSGEVVAVKKFH-S----LLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~~~~vavK~~~-~----~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
..+++|+-+.+|.+.+. |..+++|.-. + +..+..-...+..+|+.++.+++--.|....=+..+++...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999774 4446666432 2 2222223445678899999999877777777788888889999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++|..|.+.+... +..++..+-.-+.-||.. +|+|+||.++||++..+. +.++|||++..
T Consensus 81 I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888764 244667788888899999 999999999999999764 99999999974
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.24 E-value=6.1e-13 Score=140.69 Aligned_cols=217 Identities=31% Similarity=0.344 Sum_probs=96.1
Q ss_pred CCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEE
Q 005864 38 NLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTL 117 (673)
Q Consensus 38 ~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 117 (673)
.+..++.+++..|.|.. +-..+..+++|..|++.+|+|..+.. .+..+++|++|+|++|.|+.+ ..+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~-~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIEN-LLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhccc-chhhhhcchheeccccccccc--cchhhccchhhh
Confidence 34444555555555542 22334455555555555555553322 144455555555555555432 333444445555
Q ss_pred EcccCccCccCChhhhccccccccccccccccccCC-ccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCC
Q 005864 118 NFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIP-IELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKL 196 (673)
Q Consensus 118 ~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 196 (673)
++.+|.|+.+ ..+..++.|+.+++++|++....+ . ...+.+++.+.+.+|.+... ..+..+..+..+++..|.+
T Consensus 146 ~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i 220 (414)
T KOG0531|consen 146 NLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKI 220 (414)
T ss_pred eeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccccc
Confidence 5555555522 233335555555555555543222 1 23444555555555555421 2233333333444455554
Q ss_pred CCcCCcccccccc--ccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccc
Q 005864 197 SGSIPETLGNLLK--VHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNL 268 (673)
Q Consensus 197 ~~~~~~~l~~l~~--L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l 268 (673)
+...+ +..+.. |+.+++++|.+.. .+..+..+..+..|++++|++... ..+.....+..+....|.+
T Consensus 221 ~~~~~--l~~~~~~~L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~ 289 (414)
T KOG0531|consen 221 SKLEG--LNELVMLHLRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKL 289 (414)
T ss_pred eeccC--cccchhHHHHHHhcccCcccc-ccccccccccccccchhhcccccc--ccccccchHHHhccCcchh
Confidence 42111 111111 4555555555542 113344444555555555554422 1233334444444444444
|
|
| >PLN03150 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.2e-11 Score=132.38 Aligned_cols=113 Identities=34% Similarity=0.491 Sum_probs=104.0
Q ss_pred CCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEec
Q 005864 185 ELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVS 264 (673)
Q Consensus 185 ~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~ 264 (673)
.++.|+|++|.+.+.+|..+..+++|+.|+|++|.+++.+|..+..+++|+.|+|++|.+++.+|..++++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccCccccccC-CCccEEEccCccccCCCC
Q 005864 265 HNNLSGLIPSCFEGM-HGLSCIDISYNELLGLIP 297 (673)
Q Consensus 265 ~N~l~~~~~~~~~~~-~~L~~l~l~~N~l~~~~~ 297 (673)
+|++++.+|..+..+ .++..+++.+|+..+..|
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 999999999888764 467889999998766554
|
|
| >KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.3e-12 Score=138.12 Aligned_cols=245 Identities=29% Similarity=0.288 Sum_probs=180.2
Q ss_pred CCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEE
Q 005864 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFL 93 (673)
Q Consensus 14 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 93 (673)
.+..++.+.+..|.|+. .-..+..+++|+.|++.+|+|... ...+..+++|++|+|++|+|+.+. .+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhc-ccchhhhhcchheecccccccccc--chhhccchhhh
Confidence 45677777889999983 445688899999999999999843 333788999999999999999663 46677789999
Q ss_pred EccCCccccccccCccccCCCcEEEcccCccCccCC-hhhhccccccccccccccccccCCccccCCCCCCEEEccCccc
Q 005864 94 DISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIP-PEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKL 172 (673)
Q Consensus 94 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l 172 (673)
++++|.|+. ...+..+..|+.+++++|.+....+ . ...+.+|+.+++.+|.+... ..+..+..+..+++..|.+
T Consensus 146 ~l~~N~i~~--~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i 220 (414)
T KOG0531|consen 146 NLSGNLISD--ISGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIREI--EGLDLLKKLVLLSLLDNKI 220 (414)
T ss_pred eeccCcchh--ccCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhcc--cchHHHHHHHHhhcccccc
Confidence 999999974 4556668999999999999995544 2 57888999999999998632 3344555666668889988
Q ss_pred cccCCccccCCCC--CCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCC---
Q 005864 173 SGNLPRVLGSLSE--LEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGE--- 247 (673)
Q Consensus 173 ~~~~~~~l~~l~~--L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~--- 247 (673)
+...+ +..+.. |+.+++++|.+. ..+..+..+..+..|++.+|++... ..+.....+..+....|.+...
T Consensus 221 ~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (414)
T KOG0531|consen 221 SKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAI 295 (414)
T ss_pred eeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhh
Confidence 84322 223333 899999999997 4446677888999999999998753 2355556777888888877632
Q ss_pred Cccc-ccCCCcccEEEecCccccccC
Q 005864 248 IPPQ-ICNLESLEKLNVSHNNLSGLI 272 (673)
Q Consensus 248 ~~~~-~~~l~~L~~L~l~~N~l~~~~ 272 (673)
.... ....+.++.+.+.+|.+....
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (414)
T KOG0531|consen 296 SQEYITSAAPTLVTLTLELNPIRKIS 321 (414)
T ss_pred hccccccccccccccccccCcccccc
Confidence 1111 445566666666666665443
|
|
| >PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.7e-11 Score=109.42 Aligned_cols=122 Identities=30% Similarity=0.345 Sum_probs=35.5
Q ss_pred CCCEEEccCccccccCCcccc-CCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEee
Q 005864 161 SLNYLVLNGNKLSGNLPRVLG-SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDL 239 (673)
Q Consensus 161 ~L~~L~L~~n~l~~~~~~~l~-~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 239 (673)
.+++|+|++|+|+.+ +.+. .+.+|+.|++++|.++. + +.+..++.|+.|++++|.|+...+.....+++|+.|++
T Consensus 20 ~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~-l-~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~L 95 (175)
T PF14580_consen 20 KLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITK-L-EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELYL 95 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT--EEE-
T ss_pred ccccccccccccccc--cchhhhhcCCCEEECCCCCCcc-c-cCccChhhhhhcccCCCCCCccccchHHhCCcCCEEEC
Confidence 455555555555522 1233 34555555555555552 2 13455556666666666665432222234556666666
Q ss_pred cCCcCCCC-CcccccCCCcccEEEecCccccccCc---cccccCCCccEEE
Q 005864 240 SHNFLGGE-IPPQICNLESLEKLNVSHNNLSGLIP---SCFEGMHGLSCID 286 (673)
Q Consensus 240 s~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~---~~~~~~~~L~~l~ 286 (673)
++|+|.+. .-..+..+++|+.|+|.+|+++.... ..+..+|+|+.||
T Consensus 96 ~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 96 SNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred cCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeC
Confidence 66666532 11345556666666666666653311 2455667777766
|
|
| >COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.1e-09 Score=108.06 Aligned_cols=256 Identities=16% Similarity=0.203 Sum_probs=165.6
Q ss_pred CccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeee------eec-CCee
Q 005864 405 DAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGF------CSH-PRHS 476 (673)
Q Consensus 405 ~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~------~~~-~~~~ 476 (673)
...+.+|+|+-+.+|-.-. -...+-|+++....... .+.++.|... .||-+-.-+.+ ..+ +...
T Consensus 14 ~~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~~------aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~i 85 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAAQ------AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVI 85 (637)
T ss_pred CCCccccCCccceeeecch--hhchhheeecCCCchHH------HHHHHHhccCCCCcchhhhhcccHHHhhCCCcccee
Confidence 3467899999999997522 12234577766532221 1233444444 56644331111 111 2225
Q ss_pred eEEEecccCC-ChHHHH---hcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 477 FLVYECLERG-SLAEIL---SNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 477 ~lv~e~~~~g-sL~~~l---~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
.+.|+.+.+. ....+. .++......+|....+++..+|.+.+.||.. |.+-+|+.++|+|+.+++.|++.|-+
T Consensus 86 GflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsD 162 (637)
T COG4248 86 GFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSD 162 (637)
T ss_pred EEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEccc
Confidence 6777777664 233333 2234456789999999999999999999999 99999999999999999999999977
Q ss_pred ceeecCCCCCCceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhC-CCCCccccccccccccccccc--
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKG-KHPRDFISLLSSSSSNMNLSL-- 624 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~-- 624 (673)
...... ........+|...|.+||... +..-+..+|.|.+|+++++++.| ++||.++..........+..+
T Consensus 163 sfqi~~-ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~ 241 (637)
T COG4248 163 SFQINA-NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAH 241 (637)
T ss_pred ceeecc-CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhc
Confidence 665543 233345567889999999754 34457789999999999999986 999987654433222222111
Q ss_pred ------ccccCCCCCCCC-cchHHHHHHHHHHHHHcccCC--CCCCCCHHHHHHHhh
Q 005864 625 ------NEILDPRLPLPS-RNIQDKLISILEVALLCLEES--PESRPTMQTVCQLLC 672 (673)
Q Consensus 625 ------~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~d--p~~Rps~~~v~~~L~ 672 (673)
.+.-.+..+.|. ..+.-.+.++..+...|+... +.-|||++.++..|.
T Consensus 242 g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~ 298 (637)
T COG4248 242 GRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALD 298 (637)
T ss_pred ceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Confidence 111111111111 122233456788888898764 467999999988764
|
|
| >cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.5e-10 Score=110.52 Aligned_cols=143 Identities=21% Similarity=0.277 Sum_probs=110.2
Q ss_pred ceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCC--CcccceeeeeecC---CeeeEEEec
Q 005864 408 QCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH--RNIVKFYGFCSHP---RHSFLVYEC 482 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~---~~~~lv~e~ 482 (673)
+.++.|.++.||++...+|+.+++|........ .....+..|++++..+++ ..+.+++.+.... +..++||||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~ 81 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER 81 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence 568999999999998877789999987553221 124567899999999975 4467778877654 356899999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcC--------------------------------------
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDC-------------------------------------- 524 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-------------------------------------- 524 (673)
++|+++.+.+.. ..++......++.++++++.+||+..
T Consensus 82 i~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 82 VDGRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred eCCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 999988876532 23566777788888888888888531
Q ss_pred ---------------CCCeEEecCCCCCeEeCC--CCceEEecccceee
Q 005864 525 ---------------FPPIVHRDISSKNVLLSS--EYEARVSDFGIAKF 556 (673)
Q Consensus 525 ---------------~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~ 556 (673)
...++|+|+.+.||+++. ++.+.++||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 146799999999999998 66789999998863
|
This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain |
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.7e-11 Score=133.44 Aligned_cols=250 Identities=20% Similarity=0.235 Sum_probs=172.9
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.+.+.+.+-+-+|.++.++-+.-. .|...+.|.............+....+-.+.-..+||.++...--+......+++
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~ 882 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLV 882 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchh
Confidence 355667778889999999988443 3544444443322111111233344444444445667777665555566778999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
++|..+++|...++..+. .+..-.......+.++.+|||.. .+.|+|++|.|.+...++..++.|||......-
T Consensus 883 ~~~~~~~~~~Skl~~~~~---~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 883 GHYLNGGDLPSKLHNSGC---LSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred hHHhccCCchhhhhcCCC---cccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCcccccccccc
Confidence 999999999999987652 33334445566788999999998 789999999999999999999999984332210
Q ss_pred ---------------------CC----------CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCc
Q 005864 560 ---------------------GS----------SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD 608 (673)
Q Consensus 560 ---------------------~~----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 608 (673)
.. .......+|+.|.+||...+......+|.|+.|++++|.++|..||.
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 00 01123568999999999999999999999999999999999999987
Q ss_pred ccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHH
Q 005864 609 FISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQ 665 (673)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 665 (673)
.... ...++.+.....+++ ........+..+++...+..+|.+|-.+.
T Consensus 1037 a~tp--------q~~f~ni~~~~~~~p-~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1037 AETP--------QQIFENILNRDIPWP-EGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred Ccch--------hhhhhccccCCCCCC-CCccccChhhhhhhhhhhccCchhccCcc
Confidence 3322 222233333333333 23344455688899999999999997665
|
|
| >PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=99.03 E-value=3.8e-09 Score=97.25 Aligned_cols=129 Identities=23% Similarity=0.307 Sum_probs=85.2
Q ss_pred EEEEEEeCCCCEEEEEeeccchh-----------------------hhhHHHHHHHHHHHHHhccCCC--cccceeeeee
Q 005864 417 SVYRGELPSGEVVAVKKFHSLLL-----------------------SEISVQREFLNEIKALTEIRHR--NIVKFYGFCS 471 (673)
Q Consensus 417 ~vy~~~~~~~~~vavK~~~~~~~-----------------------~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~ 471 (673)
.||.|..++|..+|||..+.... ..........+|.+.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999999999999998854211 0111234578899999999765 456666442
Q ss_pred cCCeeeEEEeccc--CCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHH-HhhcCCCCeEEecCCCCCeEeCCCCceEE
Q 005864 472 HPRHSFLVYECLE--RGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSY-MHHDCFPPIVHRDISSKNVLLSSEYEARV 548 (673)
Q Consensus 472 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~-LH~~~~~~ivH~dlk~~Nill~~~~~~kl 548 (673)
...+||||++ |..+..+.... ++......++.++...+.. +|.. |++|+|+.+.||+++++ .+.+
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEEE
T ss_pred ---CCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEEE
Confidence 3579999999 65554433321 1233455677788886666 4677 99999999999999987 9999
Q ss_pred ecccceeecC
Q 005864 549 SDFGIAKFLK 558 (673)
Q Consensus 549 ~Dfg~~~~~~ 558 (673)
+|||.+....
T Consensus 148 IDf~qav~~~ 157 (188)
T PF01163_consen 148 IDFGQAVDSS 157 (188)
T ss_dssp --GTTEEETT
T ss_pred EecCcceecC
Confidence 9999987653
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A. |
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.00 E-value=3e-10 Score=128.18 Aligned_cols=128 Identities=22% Similarity=0.304 Sum_probs=57.2
Q ss_pred CCCCEEEeeCCccccCCCccccCCCCCCEEEcccCc--cccccCccccCCCCCcEEEccCcccccccccccCCCCCccEE
Q 005864 16 TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQ--LFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFL 93 (673)
Q Consensus 16 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~--i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 93 (673)
...+.+.+-+|.+. .++... .+++|++|-+.+|. +....+..|..++.|..|||++|.=.+..|..++.+-+|++|
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchh-hccCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 33444444444444 222222 22345555555543 332223334445555555555444333444444455555555
Q ss_pred EccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccc
Q 005864 94 DISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLN 146 (673)
Q Consensus 94 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n 146 (673)
+|+++.++ ..|..+.++..|.+|++..+.-...++.....+++|++|.+...
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s 652 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRS 652 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeecc
Confidence 55555544 33444555555555555544433333444444555555544433
|
|
| >KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.2e-10 Score=128.03 Aligned_cols=259 Identities=22% Similarity=0.263 Sum_probs=157.6
Q ss_pred cCCCcccCCCCCCEEEeeCCc--cccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccccccc
Q 005864 7 AIPPSVGNFTNLKGLYLYSNS--LSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVF 84 (673)
Q Consensus 7 ~~p~~~~~l~~L~~L~L~~n~--i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~ 84 (673)
.++....+ ++|++|-+.+|. +.....+.|..++.|++|||++|.=.+.+|..+++|-+|+.|+|++..|. ..|..+
T Consensus 537 ~~~~~~~~-~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l 614 (889)
T KOG4658|consen 537 HIAGSSEN-PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGL 614 (889)
T ss_pred hccCCCCC-CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHH
Confidence 44444443 579999999996 66566666889999999999988666689999999999999999999998 456778
Q ss_pred CCCCCccEEEccCCccccccccCccccCCCcEEEcccCccC--ccCChhhhccccccccccccccccccCCccccCCCCC
Q 005864 85 GIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNIT--GSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSL 162 (673)
Q Consensus 85 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~--~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L 162 (673)
.++..|.+|++..+.-....+.....+.+|++|.+...... ...-..+..+.+|+.+....... .+-..+..+..|
T Consensus 615 ~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L 692 (889)
T KOG4658|consen 615 GNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRL 692 (889)
T ss_pred HHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHH
Confidence 89999999999987765555677777999999998776532 22333444555555555543332 111112222222
Q ss_pred C----EEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccc------cccccEEEccCCcCccCCchhhhccc
Q 005864 163 N----YLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGN------LLKVHYLNLSNNQFRKEFPVELEKLV 232 (673)
Q Consensus 163 ~----~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~------l~~L~~L~l~~n~l~~~~~~~~~~l~ 232 (673)
. .+.+.++... ..+..+..+.+|+.|.+..+.+.......... ++++..+...++..-. .+...--.+
T Consensus 693 ~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~r-~l~~~~f~~ 770 (889)
T KOG4658|consen 693 RSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHMLR-DLTWLLFAP 770 (889)
T ss_pred HHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhcccccc-ccchhhccC
Confidence 2 3333333333 34445667777777777777765332222111 1122222222222111 122222335
Q ss_pred CCCeEeecCCcCCCCCcccccCCCcccEEEecCcccccc
Q 005864 233 QLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGL 271 (673)
Q Consensus 233 ~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 271 (673)
+|+.|.+..+.....+.+....+..+..+-+..+.+.+.
T Consensus 771 ~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l 809 (889)
T KOG4658|consen 771 HLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGL 809 (889)
T ss_pred cccEEEEecccccccCCCHHHHhhhcccEEecccccccc
Confidence 777777777766655555555555555555555555544
|
|
| >PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=1.4e-08 Score=99.49 Aligned_cols=144 Identities=22% Similarity=0.179 Sum_probs=103.4
Q ss_pred ceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhh--------HHHHHHHHHHHHHhccCCC--cccceeeeeec-----
Q 005864 408 QCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEI--------SVQREFLNEIKALTEIRHR--NIVKFYGFCSH----- 472 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~--------~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~----- 472 (673)
+.+-......|+++.. +|+.|.||+......... .....+.+|...+.++... .+.+++++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4555555566778766 688999997744321110 0112477899999888533 34455666543
Q ss_pred CCeeeEEEecccCC-ChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-------CC
Q 005864 473 PRHSFLVYECLERG-SLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-------EY 544 (673)
Q Consensus 473 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-------~~ 544 (673)
...-++|+|++++. +|.+++..... .+.+...+..++.+++..+.-||+. ||+|+|++++||+++. +.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~-~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~ 182 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWAT-NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDL 182 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCc
Confidence 23467999999986 89999864221 2345567778999999999999999 9999999999999975 46
Q ss_pred ceEEecccceee
Q 005864 545 EARVSDFGIAKF 556 (673)
Q Consensus 545 ~~kl~Dfg~~~~ 556 (673)
.+.++||+.+..
T Consensus 183 ~~~LIDl~r~~~ 194 (268)
T PRK15123 183 KLSVIDLHRAQI 194 (268)
T ss_pred eEEEEECCcccc
Confidence 799999998864
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.94 E-value=7.8e-10 Score=82.05 Aligned_cols=59 Identities=39% Similarity=0.624 Sum_probs=25.7
Q ss_pred CCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCc
Q 005864 41 QLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNN 99 (673)
Q Consensus 41 ~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 99 (673)
+|++|++++|+|+...+..|.++++|++|++++|.|+.+.+..|..+++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444443333344444444444444444444444444444444444444443
|
... |
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.3e-10 Score=106.31 Aligned_cols=211 Identities=16% Similarity=0.116 Sum_probs=125.2
Q ss_pred ccCCCCCCEEEcccCccccccC-cccc-CCCCCcEEEccCccccc--ccccccCCCCCccEEEccCCccccccccCcccc
Q 005864 36 IGNLMQLTNLEIDNNQLFGQIP-RSLR-NLASLNRVHLEQNHLTG--NISEVFGIYPNLTFLDISHNNFYGEIWSSWGKC 111 (673)
Q Consensus 36 ~~~l~~L~~L~L~~n~i~~~~~-~~l~-~l~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l 111 (673)
+..++.++.|.+.++.|..... ..|+ .++.++.|+|.+|.|+. .+...+.++|.|+.|+|+.|++...+...-..+
T Consensus 41 v~s~ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~ 120 (418)
T KOG2982|consen 41 VSSLRALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPL 120 (418)
T ss_pred eccccchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccc
Confidence 4444556677777777754332 1222 35678888888888883 344567888889999999888874332222466
Q ss_pred CCCcEEEcccCccCcc-CChhhhcccccccccccccccccc--CCccccCC-CCCCEEEccCcccccc--CCccccCCCC
Q 005864 112 QQLGTLNFSMNNITGS-IPPEIGKLYQLHKLDFSLNQIVGE--IPIELGNL-KSLNYLVLNGNKLSGN--LPRVLGSLSE 185 (673)
Q Consensus 112 ~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~l~~n~i~~~--~~~~l~~l-~~L~~L~L~~n~l~~~--~~~~l~~l~~ 185 (673)
.+|++|.|.+..+.-. ....+..+|.+++|.++.|.+... ........ +.+.+|.+..|...-. ....-.-+|+
T Consensus 121 ~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpn 200 (418)
T KOG2982|consen 121 KNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPN 200 (418)
T ss_pred cceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhccc
Confidence 7888888888877632 233456778888888888844311 11112222 3555666555544310 1111123466
Q ss_pred CCEEEeCCCCCCCc-CCccccccccccEEEccCCcCccC-CchhhhcccCCCeEeecCCcCCC
Q 005864 186 LEYLDLSTNKLSGS-IPETLGNLLKVHYLNLSNNQFRKE-FPVELEKLVQLSELDLSHNFLGG 246 (673)
Q Consensus 186 L~~L~l~~n~l~~~-~~~~l~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~ls~N~l~~ 246 (673)
+..+.+..|.+... ..+.+..++.+-.|+|+.|+|..- .-..+.+++.|..|.+++|++.+
T Consensus 201 v~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 201 VNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred chheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccc
Confidence 77777777766532 223445556666777777776542 22345666666666677666654
|
|
| >PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A | Back alignment and domain information |
|---|
Probab=98.92 E-value=8.8e-10 Score=81.77 Aligned_cols=61 Identities=34% Similarity=0.505 Sum_probs=58.0
Q ss_pred CCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccc
Q 005864 16 TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHL 76 (673)
Q Consensus 16 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i 76 (673)
|+|++|+|++|+|+.+.++.|.++++|++|++++|.++...+.+|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5799999999999988889999999999999999999988889999999999999999986
|
... |
| >KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=98.88 E-value=5.9e-08 Score=98.67 Aligned_cols=216 Identities=17% Similarity=0.210 Sum_probs=150.3
Q ss_pred CcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeee----cCCeeeEEEecccC-CC
Q 005864 414 GQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS----HPRHSFLVYECLER-GS 487 (673)
Q Consensus 414 ~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----~~~~~~lv~e~~~~-gs 487 (673)
-..+.|++.. .||..|++|+++....... ..-..-+++++++.|+|+|++.+++. .+...++||+|.++ ++
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~---nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQST---NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPT 364 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCc---ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCch
Confidence 4568899954 4899999999954432221 12234688999999999999999886 34567899999986 47
Q ss_pred hHHHHhcCC------------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccccee
Q 005864 488 LAEILSNDG------------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555 (673)
Q Consensus 488 L~~~l~~~~------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 555 (673)
|.+.--... .....++...|.++.|+..||.++|+. |+.-+-|.+++|+++.+.+++|+..|...
T Consensus 365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~D 441 (655)
T KOG3741|consen 365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMD 441 (655)
T ss_pred HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEeccccee
Confidence 777642221 123467899999999999999999999 99999999999999999999999999887
Q ss_pred ecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC
Q 005864 556 FLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635 (673)
Q Consensus 556 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
....+.. |.+ .--.+-|.-.||.+++.+.||..--. ..+ ...+. ++.
T Consensus 442 vl~~d~~--------------~~l---e~~Qq~D~~~lG~ll~aLAt~~~ns~----~~d-------~~~~s---~~~-- 488 (655)
T KOG3741|consen 442 VLQEDPT--------------EPL---ESQQQNDLRDLGLLLLALATGTENSN----RTD-------STQSS---HLT-- 488 (655)
T ss_pred eecCCCC--------------cch---hHHhhhhHHHHHHHHHHHhhcccccc----ccc-------chHHH---HHH--
Confidence 7655431 111 11236799999999999999854310 000 00000 000
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
.....++.++.+++.......+.+ -+..+++.+
T Consensus 489 -~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 489 -RITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred -HhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 112244455777777777777765 566666654
|
|
| >COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.85 E-value=2e-08 Score=94.64 Aligned_cols=138 Identities=22% Similarity=0.214 Sum_probs=98.6
Q ss_pred CCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhh-----------------h--hHHHHHHHHHHHHHhccCCC--c
Q 005864 404 FDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLS-----------------E--ISVQREFLNEIKALTEIRHR--N 462 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~-----------------~--~~~~~~~~~e~~~l~~l~h~--n 462 (673)
..++..||.|--+.||.|..+.|.++|||.-+..... + .-......+|.++|.++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 4567889999999999999999999999965322110 0 01234467899999988644 5
Q ss_pred ccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC
Q 005864 463 IVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS 542 (673)
Q Consensus 463 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 542 (673)
|.+.+++ +...+||||++|--|...- ++......++..|.+-+.-.-.. |+||+|+++-||++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~ 237 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTE 237 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEec
Confidence 6666554 4568999999996665431 11223334555555555555566 9999999999999999
Q ss_pred CCceEEecccceee
Q 005864 543 EYEARVSDFGIAKF 556 (673)
Q Consensus 543 ~~~~kl~Dfg~~~~ 556 (673)
||.+.++||--+..
T Consensus 238 dg~~~vIDwPQ~v~ 251 (304)
T COG0478 238 DGDIVVIDWPQAVP 251 (304)
T ss_pred CCCEEEEeCccccc
Confidence 99999999976654
|
|
| >KOG2137 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.3e-09 Score=112.81 Aligned_cols=148 Identities=20% Similarity=0.274 Sum_probs=103.4
Q ss_pred HHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC----ce-----eccccccccccccccc
Q 005864 511 KSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN----WT-----EFAGTFGYVAPELAYT 581 (673)
Q Consensus 511 ~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~----~~-----~~~~~~~y~aPE~~~~ 581 (673)
.+++.|+.|+|... ++||++|.|++|.++..+.+|++.|+.+....++... +. .......|.|||++..
T Consensus 106 ~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 35669999999884 9999999999999999999999999998765442221 11 1224568999999999
Q ss_pred CCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccccccc-CCCCCCCCcchHHHHHHHHHHHHHcccCCCC
Q 005864 582 MKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEIL-DPRLPLPSRNIQDKLISILEVALLCLEESPE 659 (673)
Q Consensus 582 ~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~ 659 (673)
...+.++|+||+|+.+|.+.. |+.-+.......... ..... +..... .....+.++.+=+.+++..++.
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~------~~~~~~~~~~~~---~s~~~p~el~~~l~k~l~~~~~ 254 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS------FSRNLLNAGAFG---YSNNLPSELRESLKKLLNGDSA 254 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhh------hhhccccccccc---ccccCcHHHHHHHHHHhcCCcc
Confidence 888999999999999999994 555444221111100 00000 001111 1123455688888999999999
Q ss_pred CCCCHHHHHH
Q 005864 660 SRPTMQTVCQ 669 (673)
Q Consensus 660 ~Rps~~~v~~ 669 (673)
-||++.++..
T Consensus 255 ~rp~~~~l~~ 264 (700)
T KOG2137|consen 255 VRPTLDLLLS 264 (700)
T ss_pred cCcchhhhhc
Confidence 9998877654
|
|
| >PRK09902 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.6e-07 Score=86.79 Aligned_cols=141 Identities=21% Similarity=0.218 Sum_probs=103.8
Q ss_pred eccCCcEEEEEEEeCCCCEEEEEeeccchhhh---hHHHHHHHHHHHHHhccCC--Ccccceeeeee-c----CCeeeEE
Q 005864 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSE---ISVQREFLNEIKALTEIRH--RNIVKFYGFCS-H----PRHSFLV 479 (673)
Q Consensus 410 ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~-~----~~~~~lv 479 (673)
-|+||.+.|++... +|+.+-+|+-....... +.....|.+|+..+.++.. -.+.++. ++. . ...-++|
T Consensus 26 ~~rgG~SgV~r~~~-~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVER-NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEe-CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 46799999999877 45578888764111111 2346789999999999953 2344444 332 1 1235799
Q ss_pred EecccC-CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc--eEEecccceee
Q 005864 480 YECLER-GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE--ARVSDFGIAKF 556 (673)
Q Consensus 480 ~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~~~~ 556 (673)
+|-+++ -+|.+++.... ..+.+...+..++.++++.++-||+. |+.|+|+.+.||+++.++. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~-~~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHA-VSPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 997764 48999886543 23467777889999999999999999 9999999999999986666 99999987763
|
|
| >KOG1859 consensus Leucine-rich repeat proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.4e-10 Score=121.09 Aligned_cols=127 Identities=30% Similarity=0.263 Sum_probs=55.7
Q ss_pred CCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecC
Q 005864 162 LNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241 (673)
Q Consensus 162 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~ 241 (673)
|...+.+.|.+. ....++.-++.|+.|+|++|++++. +.+..+++|++|||++|.++.+.-....++ .|..|.|++
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc-~L~~L~lrn 241 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGC-KLQLLNLRN 241 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhh-hheeeeecc
Confidence 444444444444 3333444444555555555555422 144445555555555555543221122222 255555555
Q ss_pred CcCCCCCcccccCCCcccEEEecCccccccCc-cccccCCCccEEEccCccccC
Q 005864 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIP-SCFEGMHGLSCIDISYNELLG 294 (673)
Q Consensus 242 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~~~~L~~l~l~~N~l~~ 294 (673)
|.++.. ..+.++++|+.||+++|-|.+... ..+..+..|+.|+|.||++.+
T Consensus 242 N~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 242 NALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred cHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 554411 224445555555555554443211 223344445555555555543
|
|
| >KOG2982 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.6e-09 Score=101.70 Aligned_cols=209 Identities=22% Similarity=0.186 Sum_probs=105.0
Q ss_pred CCCcEEEccCccccccccc-cc-CCCCCccEEEccCCcccc--ccccCccccCCCcEEEcccCccCccCChhhhcccccc
Q 005864 64 ASLNRVHLEQNHLTGNISE-VF-GIYPNLTFLDISHNNFYG--EIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLH 139 (673)
Q Consensus 64 ~~L~~L~L~~n~i~~~~~~-~~-~~l~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 139 (673)
.-+..|.+.++.|..+... .| +..++++.|||.+|.|+. .....+.+++.|+.|+|+.|.+..
T Consensus 45 ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s------------- 111 (418)
T KOG2982|consen 45 RALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSS------------- 111 (418)
T ss_pred cchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCC-------------
Confidence 3444555666665533221 11 334556666666666653 112223445555555555555542
Q ss_pred ccccccccccccCCccccCCCCCCEEEccCcccccc-CCccccCCCCCCEEEeCCCCCCC--cCCccccc-cccccEEEc
Q 005864 140 KLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN-LPRVLGSLSELEYLDLSTNKLSG--SIPETLGN-LLKVHYLNL 215 (673)
Q Consensus 140 ~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L~~L~l~~n~l~~--~~~~~l~~-l~~L~~L~l 215 (673)
.+...-..+.+|+.|-|.+..+... ....+..+|.++.|+++.|.+.. ...+.... -+.+++|++
T Consensus 112 -----------~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~ 180 (418)
T KOG2982|consen 112 -----------DIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQ 180 (418)
T ss_pred -----------ccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhc
Confidence 2211112334555555555444321 11233445555555555553211 00111111 123344444
Q ss_pred cCCcCcc--CCchhhhcccCCCeEeecCCcCCCCCc-ccccCCCcccEEEecCcccccc-CccccccCCCccEEEccCcc
Q 005864 216 SNNQFRK--EFPVELEKLVQLSELDLSHNFLGGEIP-PQICNLESLEKLNVSHNNLSGL-IPSCFEGMHGLSCIDISYNE 291 (673)
Q Consensus 216 ~~n~l~~--~~~~~~~~l~~L~~L~ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~-~~~~~~~~~~L~~l~l~~N~ 291 (673)
..|.... .....-..++++..+.+..|++..... ..+..++.+..|+|+.|+|... ..+.+..++.|..|.+++|+
T Consensus 181 ~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~P 260 (418)
T KOG2982|consen 181 LPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENP 260 (418)
T ss_pred CCcHHHHHHHHHhHHhhcccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCc
Confidence 4433210 000011224577788888887764322 3466678888889999988654 23567888999999999998
Q ss_pred ccCCC
Q 005864 292 LLGLI 296 (673)
Q Consensus 292 l~~~~ 296 (673)
+....
T Consensus 261 l~d~l 265 (418)
T KOG2982|consen 261 LSDPL 265 (418)
T ss_pred ccccc
Confidence 86544
|
|
| >COG0661 AarF Predicted unusual protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.5e-07 Score=99.98 Aligned_cols=143 Identities=22% Similarity=0.277 Sum_probs=96.3
Q ss_pred ceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhh---------------------------H----------HHHHHHH
Q 005864 408 QCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEI---------------------------S----------VQREFLN 450 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~---------------------------~----------~~~~~~~ 450 (673)
+.|+.++-|.||+|++++|+.||||+.+....... . ..-++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 67999999999999999999999998865432110 0 1112455
Q ss_pred HHHHHhccC-----CCcccceeeeeecCCeeeEEEecccCCChHHHH--hcCCCCccchHHHHHHHHHHHHHHH-HHHhh
Q 005864 451 EIKALTEIR-----HRNIVKFYGFCSHPRHSFLVYECLERGSLAEIL--SNDGSIKEFSWIVRTNVIKSVANAL-SYMHH 522 (673)
Q Consensus 451 e~~~l~~l~-----h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l--~~~~~~~~l~~~~~~~i~~~i~~~l-~~LH~ 522 (673)
|...+.+++ .|++.-..=|+...+...++|||++|-.+.+.. +..+ .+. ..++..++++. ..+=.
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g----~d~---k~ia~~~~~~f~~q~~~ 283 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAG----IDR---KELAELLVRAFLRQLLR 283 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcC----CCH---HHHHHHHHHHHHHHHHh
Confidence 666666653 344433333444456678999999999998884 4432 221 22222222221 11222
Q ss_pred cCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 523 DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 523 ~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
. |++|.|..|.||+++.++++.+.|||+...+.+.
T Consensus 284 d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~~ 318 (517)
T COG0661 284 D---GFFHADPHPGNILVRSDGRIVLLDFGIVGRLDPK 318 (517)
T ss_pred c---CccccCCCccceEEecCCcEEEEcCcceecCCHH
Confidence 3 8999999999999999999999999999877543
|
|
| >PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases | Back alignment and domain information |
|---|
Probab=98.65 E-value=2.2e-07 Score=88.13 Aligned_cols=127 Identities=17% Similarity=0.259 Sum_probs=93.5
Q ss_pred CCCEEEEEeeccchhhh----hHHHHHHHHHHHHHhccC--CCcccceeeeeecCC----eeeEEEecccCC-ChHHHHh
Q 005864 425 SGEVVAVKKFHSLLLSE----ISVQREFLNEIKALTEIR--HRNIVKFYGFCSHPR----HSFLVYECLERG-SLAEILS 493 (673)
Q Consensus 425 ~~~~vavK~~~~~~~~~----~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~----~~~lv~e~~~~g-sL~~~l~ 493 (673)
.++.+.+|......... ........+|...+..++ .-.+.+.+++..... ..++|+|++++. +|.+++.
T Consensus 31 ~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~ 110 (206)
T PF06293_consen 31 VGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQ 110 (206)
T ss_pred cceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHH
Confidence 45667777543221111 122446778888888885 334566777765532 347999999984 8999987
Q ss_pred cCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC---ceEEecccceeec
Q 005864 494 NDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY---EARVSDFGIAKFL 557 (673)
Q Consensus 494 ~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfg~~~~~ 557 (673)
.... .+......++.++++.++-||+. ||+|+|+++.|||++.+. .+.++||+-++..
T Consensus 111 ~~~~---~~~~~~~~ll~~l~~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 111 QWEQ---LDPSQRRELLRALARLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred hhcc---cchhhHHHHHHHHHHHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 6432 45566788999999999999999 999999999999999887 8999999988754
|
Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane |
| >KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.61 E-value=1e-09 Score=103.16 Aligned_cols=176 Identities=22% Similarity=0.228 Sum_probs=83.2
Q ss_pred CccEEEccCCccccc-cccCccccCCCcEEEcccCccCccCChhhhcccccccccccccc-cccc-CCccccCCCCCCEE
Q 005864 89 NLTFLDISHNNFYGE-IWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQ-IVGE-IPIELGNLKSLNYL 165 (673)
Q Consensus 89 ~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~-i~~~-~~~~l~~l~~L~~L 165 (673)
.|++|||++..|+.. ....++.|.+|+.|.|.++++.+.+...+....+|+.|+|+.+. ++.. ..-.+.+++.|..|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 366666666555421 12234555666666666666665555556666666666666542 2110 01123445566666
Q ss_pred EccCccccccCCccc--cCCCCCCEEEeCCCCC---CCcCCccccccccccEEEccCCc-CccCCchhhhcccCCCeEee
Q 005864 166 VLNGNKLSGNLPRVL--GSLSELEYLDLSTNKL---SGSIPETLGNLLKVHYLNLSNNQ-FRKEFPVELEKLVQLSELDL 239 (673)
Q Consensus 166 ~L~~n~l~~~~~~~l--~~l~~L~~L~l~~n~l---~~~~~~~l~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l 239 (673)
+|++|.++....... .--++|+.|+|+++.- ...+..-..++++|..||||+|. ++......|.+++.|++|.+
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~L~~lSl 345 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNYLQHLSL 345 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcchheeeeh
Confidence 666665542211111 1124555555554421 11111122345556666665543 23223334455555555555
Q ss_pred cCCcCCCCCcc---cccCCCcccEEEecCc
Q 005864 240 SHNFLGGEIPP---QICNLESLEKLNVSHN 266 (673)
Q Consensus 240 s~N~l~~~~~~---~~~~l~~L~~L~l~~N 266 (673)
+.|.. ++|. .+...|+|.+|++.++
T Consensus 346 sRCY~--i~p~~~~~l~s~psl~yLdv~g~ 373 (419)
T KOG2120|consen 346 SRCYD--IIPETLLELNSKPSLVYLDVFGC 373 (419)
T ss_pred hhhcC--CChHHeeeeccCcceEEEEeccc
Confidence 55543 2332 2334455555555443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 673 | ||||
| 3tl8_A | 349 | The Avrptob-Bak1 Complex Reveals Two Structurally S | 8e-37 | ||
| 3uim_A | 326 | Structural Basis For The Impact Of Phosphorylation | 3e-36 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 1e-28 | ||
| 3riz_A | 772 | Crystal Structure Of The Plant Steroid Receptor Bri | 7e-28 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 1e-28 | ||
| 3rgx_A | 768 | Structural Insight Into Brassinosteroid Perception | 8e-28 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 1e-27 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 2e-27 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 5e-27 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 9e-27 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 1e-26 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 4e-25 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 3e-24 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 3e-24 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 1e-20 | ||
| 1ogq_A | 313 | The Crystal Structure Of Pgip (Polygalacturonase In | 7e-18 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 1e-19 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 2e-19 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 2e-19 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 3e-19 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 4e-19 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 4e-19 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 5e-19 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 7e-19 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 7e-19 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 7e-19 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 8e-19 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 8e-19 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 9e-19 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 1e-18 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 1e-18 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 1e-18 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 1e-18 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 1e-18 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 1e-18 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 1e-18 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 2e-18 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 2e-18 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 2e-18 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 2e-18 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 3e-18 | ||
| 3dtc_A | 271 | Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp | 3e-18 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 3e-18 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 3e-18 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 3e-18 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 3e-18 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 4e-18 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 4e-18 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 4e-18 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 4e-18 | ||
| 4f0f_A | 287 | Crystal Structure Of The Roco4 Kinase Domain Bound | 6e-18 | ||
| 4f1o_A | 287 | Crystal Structure Of The L1180t Mutant Roco4 Kinase | 1e-17 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 1e-17 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 1e-17 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 1e-17 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 2e-17 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 2e-17 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 2e-17 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 3e-17 | ||
| 4f1m_A | 287 | Crystal Structure Of The G1179s Roco4 Kinase Domain | 3e-17 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 4e-17 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 5e-17 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 9e-17 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 9e-17 | ||
| 1mqb_A | 333 | Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro | 1e-16 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 1e-16 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-16 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-16 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 1e-16 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 1e-16 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 2e-16 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 3e-16 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 3e-16 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 3e-16 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 3e-16 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-16 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 3e-16 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 3e-16 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 3e-16 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 4e-16 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 4e-16 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 4e-16 | ||
| 4hzs_A | 341 | Crystal Structure Of Ack1 Kinase Domain With C-term | 5e-16 | ||
| 4hzr_A | 277 | Crystal Structure Of Ack1 Kinase Domain Length = 27 | 5e-16 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 5e-16 | ||
| 3eqp_B | 276 | Crystal Structure Of Ack1 With Compound T95 Length | 5e-16 | ||
| 4id7_A | 273 | Ack1 Kinase In Complex With The Inhibitor Cis-3-[8- | 6e-16 | ||
| 1u46_A | 291 | Crystal Structure Of The Unphosphorylated Kinase Do | 6e-16 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 6e-16 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 7e-16 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 7e-16 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 8e-16 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 8e-16 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 9e-16 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 9e-16 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 9e-16 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 1e-15 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 1e-15 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 1e-15 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 1e-15 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 1e-15 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 1e-15 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 1e-15 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 1e-15 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 1e-15 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 1e-15 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 1e-15 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 1e-15 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 1e-15 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 1e-15 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 2e-15 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 2e-15 | ||
| 1u54_A | 291 | Crystal Structures Of The Phosphorylated And Unphos | 2e-15 | ||
| 4ewh_B | 275 | Co-Crystal Structure Of Ack1 With Inhibitor Length | 2e-15 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 2e-15 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 2e-15 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 2e-15 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 2e-15 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 3e-15 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 5e-15 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 5e-15 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 5e-15 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 5e-15 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 5e-15 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 5e-15 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 6e-15 | ||
| 3pyy_A | 298 | Discovery And Characterization Of A Cell-Permeable, | 6e-15 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 6e-15 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 6e-15 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 6e-15 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 7e-15 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 9e-15 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 9e-15 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 9e-15 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 1e-14 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 1e-14 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 1e-14 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 1e-14 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 1e-14 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 1e-14 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 1e-14 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 1e-14 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 1e-14 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 1e-14 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 1e-14 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 1e-14 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 1e-14 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 2e-14 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 2e-14 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 2e-14 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 2e-14 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 2e-14 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 2e-14 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 2e-14 | ||
| 3oy3_A | 284 | Crystal Structure Of Abl T315i Mutant Kinase Domain | 2e-14 | ||
| 3oxz_A | 284 | Crystal Structure Of Abl Kinase Domain Bound With A | 2e-14 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 2e-14 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 2e-14 | ||
| 2z60_A | 288 | Crystal Structure Of The T315i Mutant Of Abl Kinase | 2e-14 | ||
| 2qoh_A | 288 | Crystal Structure Of Abl Kinase Bound With Ppy-a Le | 2e-14 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 2e-14 | ||
| 1fpu_A | 293 | Crystal Structure Of Abl Kinase Domain In Complex W | 2e-14 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 3e-14 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 3e-14 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 3e-14 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 3e-14 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 3e-14 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 3e-14 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 3e-14 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 3e-14 | ||
| 3dk3_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 3e-14 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 4e-14 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 4e-14 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 4e-14 | ||
| 3dk7_A | 277 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 4e-14 | ||
| 2hz0_A | 270 | Abl Kinase Domain In Complex With Nvp-Aeg082 Length | 4e-14 | ||
| 3qri_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain I | 5e-14 | ||
| 2hiw_A | 287 | Crystal Structure Of Inactive Conformation Abl Kina | 5e-14 | ||
| 2g1t_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 5e-14 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 5e-14 | ||
| 2e2b_A | 293 | Crystal Structure Of The C-Abl Kinase Domain In Com | 5e-14 | ||
| 2hzi_A | 277 | Abl Kinase Domain In Complex With Pd180970 Length = | 5e-14 | ||
| 3qrj_A | 277 | The Crystal Structure Of Human Abl1 Kinase Domain T | 5e-14 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 5e-14 | ||
| 3bkb_A | 377 | Crystal Structure Of Human Feline Sarcoma Viral Onc | 5e-14 | ||
| 2hyy_A | 273 | Human Abl Kinase Domain In Complex With Imatinib (S | 5e-14 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 6e-14 | ||
| 3h9r_A | 330 | Crystal Structure Of The Kinase Domain Of Type I Ac | 6e-14 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 6e-14 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 6e-14 | ||
| 3dk6_A | 293 | Crystal Structure Of Mutant Abl Kinase Domain In Co | 6e-14 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 6e-14 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 7e-14 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 7e-14 | ||
| 1opk_A | 495 | Structural Basis For The Auto-Inhibition Of C-Abl T | 7e-14 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 8e-14 | ||
| 4dym_A | 301 | Crystal Structure Of The Acvr1 Kinase Domain In Com | 8e-14 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 8e-14 | ||
| 2f4j_A | 287 | Structure Of The Kinase Domain Of An Imatinib-Resis | 8e-14 | ||
| 3mtf_A | 301 | Crystal Structure Of The Acvr1 Kinase In Complex Wi | 8e-14 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 8e-14 | ||
| 2g2f_A | 287 | A Src-Like Inactive Conformation In The Abl Tyrosin | 9e-14 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 9e-14 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 9e-14 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 1e-13 | ||
| 2gqg_A | 278 | X-Ray Crystal Structure Of Dasatinib (Bms-354825) B | 1e-13 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-13 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 1e-13 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 1e-13 | ||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 1e-13 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 1e-13 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 1e-13 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 1e-13 | ||
| 2v7a_A | 286 | Crystal Structure Of The T315i Abl Mutant In Comple | 1e-13 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 1e-13 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 1e-13 | ||
| 2fo0_A | 495 | Organization Of The Sh3-Sh2 Unit In Active And Inac | 1e-13 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 1e-13 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 1e-13 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 1e-13 | ||
| 3cd3_A | 377 | Crystal Structure Of Phosphorylated Human Feline Sa | 1e-13 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 2e-13 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 2e-13 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 2e-13 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 2e-13 | ||
| 3gen_A | 283 | The 1.6 A Crystal Structure Of Human Bruton's Tyros | 2e-13 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 2e-13 | ||
| 1opl_A | 537 | Structural Basis For The Auto-Inhibition Of C-Abl T | 2e-13 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-13 | ||
| 3oct_A | 265 | Crystal Structure Of Bruton's Tyrosine Kinase Mutan | 2e-13 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 2e-13 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-13 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 2e-13 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-13 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 2e-13 | ||
| 3k54_A | 283 | Structures Of Human Bruton's Tyrosine Kinase In Act | 2e-13 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 2e-13 | ||
| 3ocs_A | 271 | Crystal Structure Of Bruton's Tyrosine Kinase In Co | 2e-13 | ||
| 3gvu_A | 292 | The Crystal Structure Of Human Abl2 In Complex With | 2e-13 | ||
| 1k2p_A | 263 | Crystal Structure Of Bruton's Tyrosine Kinase Domai | 2e-13 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 2e-13 | ||
| 3pix_A | 274 | Crystal Structure Of Btk Kinase Domain Complexed Wi | 2e-13 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 3e-13 | ||
| 3p08_A | 267 | Crystal Structure Of The Human Btk Kinase Domain Le | 3e-13 | ||
| 3srv_A | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 3e-13 | ||
| 1xba_A | 291 | Crystal Structure Of Apo Syk Tyrosine Kinase Domain | 4e-13 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 4e-13 | ||
| 4f4p_A | 273 | Syk In Complex With Ligand Lasw836 Length = 273 | 4e-13 | ||
| 4fl3_A | 635 | Structural And Biophysical Characterization Of The | 4e-13 | ||
| 3tub_A | 293 | Crystal Structure Of Syk Kinase Domain With 1-(5-(6 | 4e-13 | ||
| 3vf8_A | 299 | Crystal Structure Of Spleen Tyrosine Kinase Syk Cat | 4e-13 | ||
| 4fl2_A | 636 | Structural And Biophysical Characterization Of The | 4e-13 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 4e-13 | ||
| 3srv_B | 277 | Crystal Structure Of Spleen Tyrosine Kinase (Syk) I | 4e-13 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 4e-13 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 4e-13 | ||
| 3emg_A | 291 | Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami | 4e-13 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 4e-13 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 4e-13 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 4e-13 | ||
| 4dfl_A | 274 | Crystal Structure Of Spleen Tyrosine Kinase Complex | 4e-13 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 5e-13 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 5e-13 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 6e-13 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 6e-13 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 6e-13 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 6e-13 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 6e-13 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 6e-13 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 6e-13 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 6e-13 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 6e-13 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 6e-13 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 6e-13 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 7e-13 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 7e-13 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 7e-13 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 7e-13 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 7e-13 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 7e-13 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 7e-13 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 7e-13 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 7e-13 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 7e-13 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 7e-13 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 8e-13 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 8e-13 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 9e-13 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 9e-13 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 9e-13 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 1e-12 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 1e-12 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 1e-12 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 1e-12 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 2e-12 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 2e-12 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 3e-12 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 3e-12 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 4e-12 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 5e-12 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 5e-12 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 6e-12 | ||
| 3q4t_A | 322 | Crystal Structure Of Activin Receptor Type-Iia (Acv | 6e-12 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 6e-12 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 7e-12 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 7e-12 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 9e-12 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 9e-12 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 9e-12 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 9e-12 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 1e-11 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 1e-11 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 2e-11 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 2e-11 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 2e-11 | ||
| 3my0_A | 305 | Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai | 2e-11 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 2e-11 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 2e-11 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 2e-11 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 2e-11 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 3e-11 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 3e-11 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 4e-11 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 4e-11 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 4e-11 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 4e-11 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 5e-11 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 5e-11 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 5e-11 | ||
| 2j0m_B | 276 | Crystal Structure A Two-Chain Complex Between The F | 6e-11 | ||
| 2jkm_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 6e-11 | ||
| 4ebw_A | 304 | Structure Of Focal Adhesion Kinase Catalytic Domain | 6e-11 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 6e-11 | ||
| 1mp8_A | 281 | Crystal Structure Of Focal Adhesion Kinase (Fak) Le | 7e-11 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 7e-11 | ||
| 2qlu_A | 314 | Crystal Structure Of Activin Receptor Type Ii Kinas | 7e-11 | ||
| 3bz3_A | 276 | Crystal Structure Analysis Of Focal Adhesion Kinase | 7e-11 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 7e-11 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 8e-11 | ||
| 3pxk_A | 282 | Focal Adhesion Kinase Catalytic Domain In Complex W | 8e-11 | ||
| 2etm_A | 281 | Crystal Structure Of Focal Adhesion Kinase Domain C | 8e-11 | ||
| 2omx_A | 462 | Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX | 8e-11 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 9e-11 | ||
| 2omu_A | 462 | Crystal Structure Of Inla G194s+s Y369s/hec1 Comple | 1e-10 | ||
| 2omt_A | 462 | Crystal Structure Of Inla G194s+sHEC1 COMPLEX Lengt | 1e-10 | ||
| 3q6w_A | 307 | Structure Of Dually-phosphorylated Met Receptor Kin | 1e-10 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 1e-10 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 1e-10 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 1e-10 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 2e-10 | ||
| 2g15_A | 318 | Structural Characterization Of Autoinhibited C-Met | 2e-10 | ||
| 4gg5_A | 319 | Crystal Structure Of Cmet In Complex With Novel Inh | 2e-10 | ||
| 2omz_A | 466 | Crystal Structure Of Inla Y369a/hec1 Complex Length | 2e-10 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 2e-10 | ||
| 2omy_A | 461 | Crystal Structure Of Inla S192n/hec1 Complex Length | 2e-10 | ||
| 2omv_A | 461 | Crystal Structure Of Inla S192n Y369s/hec1 Complex | 2e-10 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 2e-10 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 2e-10 | ||
| 1o6s_A | 466 | Internalin (Listeria Monocytogenes) E-Cadherin (Hum | 2e-10 | ||
| 3q6u_A | 308 | Structure Of The Apo Met Receptor Kinase In The Dua | 2e-10 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 2e-10 | ||
| 2wd1_A | 292 | Human C-Met Kinase In Complex With Azaindole Inhibi | 2e-10 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 2e-10 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 2e-10 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 2e-10 | ||
| 3gop_A | 361 | Crystal Structure Of The Egf Receptor Juxtamembrane | 2e-10 | ||
| 3i5n_A | 309 | Crystal Structure Of C-Met With Triazolopyridazine | 2e-10 | ||
| 2wgj_A | 306 | X-Ray Structure Of Pf-02341066 Bound To The Kinase | 2e-10 | ||
| 3lq8_A | 302 | Structure Of The Kinase Domain Of C-Met Bound To Xl | 2e-10 | ||
| 2rfn_A | 310 | X-ray Structure Of C-met With Inhibitor. Length = 3 | 2e-10 | ||
| 3f66_A | 298 | Human C-Met Kinase In Complex With Quinoxaline Inhi | 3e-10 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 3e-10 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 3e-10 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 3e-10 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 3e-10 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 4e-10 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 4e-10 | ||
| 3lmg_A | 344 | Crystal Structure Of The Erbb3 Kinase Domain In Com | 4e-10 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 5e-10 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 5e-10 | ||
| 3a4p_A | 319 | Human C-Met Kinase Domain Complexed With 6-Benzylox | 5e-10 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 5e-10 | ||
| 3dkc_A | 317 | Sgx Clone 5698a65kfg1h1 Length = 317 | 5e-10 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 5e-10 | ||
| 3kex_A | 325 | Crystal Structure Of The Catalytically Inactive Kin | 5e-10 | ||
| 3qti_A | 314 | C-Met Kinase In Complex With Nvp-Bvu972 Length = 31 | 6e-10 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 6e-10 | ||
| 3dkg_A | 317 | Sgx Clone 5698a109kfg1h1 Length = 317 | 6e-10 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 6e-10 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 6e-10 | ||
| 1r0p_A | 312 | Crystal Structure Of The Tyrosine Kinase Domain Of | 6e-10 | ||
| 3c1x_A | 373 | Crystal Structure Of The Tyrosine Kinase Domain Of | 6e-10 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 6e-10 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 6e-10 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 6e-10 | ||
| 3cth_A | 314 | Crystal Structure Of The Tyrosine Kinase Domain Of | 6e-10 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 7e-10 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 7e-10 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 7e-10 | ||
| 3pjc_A | 315 | Crystal Structure Of Jak3 Complexed With A Potent A | 8e-10 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 8e-10 | ||
| 3a8w_A | 345 | Crystal Structure Of Pkciota Kinase Domain Length = | 8e-10 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 8e-10 | ||
| 4dc2_A | 396 | Structure Of Pkc In Complex With A Substrate Peptid | 8e-10 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 8e-10 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 8e-10 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 8e-10 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 8e-10 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 8e-10 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 8e-10 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 8e-10 | ||
| 4hvd_A | 314 | Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h | 8e-10 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 9e-10 | ||
| 3lxk_A | 327 | Structural And Thermodynamic Characterization Of Th | 9e-10 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 9e-10 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 9e-10 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 1e-09 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 1e-09 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 1e-09 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 1e-09 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 1e-09 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 1e-09 | ||
| 3zh8_A | 349 | A Novel Small Molecule Apkc Inhibitor Length = 349 | 1e-09 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 1e-09 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 1e-09 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 1e-09 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 1e-09 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 1e-09 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 1e-09 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 1e-09 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 1e-09 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 1e-09 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 1e-09 | ||
| 4g5p_A | 330 | Crystal Structure Of Egfr Kinase T790m In Complex W | 1e-09 | ||
| 1u59_A | 287 | Crystal Structure Of The Zap-70 Kinase Domain In Co | 1e-09 | ||
| 4i24_A | 329 | Structure Of T790m Egfr Kinase Domain Co-crystalliz | 1e-09 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 1e-09 | ||
| 1zrz_A | 364 | Crystal Structure Of The Catalytic Domain Of Atypic | 1e-09 | ||
| 3pp0_A | 338 | Crystal Structure Of The Kinase Domain Of Human Her | 1e-09 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 1e-09 | ||
| 3ika_A | 331 | Crystal Structure Of Egfr 696-1022 T790m Mutant Cov | 1e-09 | ||
| 3sdj_A | 448 | Structure Of Rnase-Inactive Point Mutant Of Oligome | 1e-09 | ||
| 2rfd_A | 324 | Crystal Structure Of The Complex Between The Egfr K | 1e-09 | ||
| 2jiv_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 1e-09 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 1e-09 | ||
| 2jiu_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 1e-09 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 1e-09 | ||
| 3fbv_A | 448 | Crystal Structure Of The Oligomer Formed By The Kin | 2e-09 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 2e-09 | ||
| 4i23_A | 329 | Crystal Structure Of The Wild-type Egfr Kinase Doma | 2e-09 | ||
| 4g5j_A | 330 | Crystal Structure Of Egfr Kinase In Complex With Bi | 2e-09 | ||
| 2rio_A | 434 | Structure Of The Dual Enzyme Ire1 Reveals The Basis | 2e-09 | ||
| 2jit_A | 327 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 2e-09 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 2e-09 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 2e-09 | ||
| 2gs2_A | 330 | Crystal Structure Of The Active Egfr Kinase Domain | 2e-09 | ||
| 1yvj_A | 290 | Crystal Structure Of The Jak3 Kinase Domain In Comp | 2e-09 | ||
| 1xkk_A | 352 | Egfr Kinase Domain Complexed With A Quinazoline Inh | 2e-09 | ||
| 2j5e_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 2e-09 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 2e-09 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 2e-09 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 2e-09 | ||
| 3lzb_A | 327 | Egfr Kinase Domain Complexed With An Imidazo[2,1-B] | 2e-09 | ||
| 2gs7_A | 330 | Crystal Structure Of The Inactive Egfr Kinase Domai | 2e-09 | ||
| 1m14_A | 333 | Tyrosine Kinase Domain From Epidermal Growth Factor | 2e-09 | ||
| 3vjo_A | 334 | Crystal Structure Of The Wild-Type Egfr Kinase Doma | 2e-09 | ||
| 4hjo_A | 337 | Crystal Structure Of The Inactive Egfr Tyrosine Kin | 2e-09 | ||
| 2j5f_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 2e-09 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 2e-09 | ||
| 2i1m_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An | 2e-09 | ||
| 3bea_A | 333 | Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P | 2e-09 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 2e-09 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 2e-09 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 3e-09 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 3e-09 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 3e-09 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 3e-09 | ||
| 3bel_A | 315 | X-Ray Structure Of Egfr In Complex With Oxime Inhib | 3e-09 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 3e-09 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 3e-09 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 3e-09 | ||
| 2yjr_A | 342 | Structure Of F1174l Mutant Anaplastic Lymphoma Kina | 3e-09 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 3e-09 | ||
| 4fnw_A | 327 | Crystal Structure Of The Apo F1174l Anaplastic Lymp | 3e-09 | ||
| 1k3a_A | 299 | Structure Of The Insulin-Like Growth Factor 1 Recep | 3e-09 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 3e-09 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 3e-09 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 3e-09 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 3e-09 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 3e-09 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 3e-09 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 3e-09 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 3e-09 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 4e-09 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 4e-09 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 4e-09 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 4e-09 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 4e-09 | ||
| 1p4o_A | 322 | Structure Of Apo Unactivated Igf-1r Kinase Domain A | 4e-09 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 4e-09 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 4e-09 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 4e-09 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 4e-09 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 4e-09 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 4e-09 | ||
| 3lw0_A | 304 | Igf-1rk In Complex With Ligand Msc1609119a-1 Length | 4e-09 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 4e-09 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 4e-09 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 4e-09 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 4e-09 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 4e-09 | ||
| 2xb7_A | 315 | Structure Of Human Anaplastic Lymphoma Kinase In Co | 4e-09 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 4e-09 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 4e-09 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 4e-09 | ||
| 2yfx_A | 327 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 4e-09 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 4e-09 | ||
| 2yhv_A | 342 | Structure Of L1196m Mutant Anaplastic Lymphoma Kina | 4e-09 | ||
| 2ozo_A | 613 | Autoinhibited Intact Human Zap-70 Length = 613 | 5e-09 | ||
| 2zm3_A | 308 | Complex Structure Of Insulin-Like Growth Factor Rec | 5e-09 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 5e-09 | ||
| 4i21_A | 329 | Crystal Structure Of L858r + T790m Egfr Kinase Doma | 5e-09 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 5e-09 | ||
| 2xp2_A | 327 | Structure Of The Human Anaplastic Lymphoma Kinase I | 5e-09 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 5e-09 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 5e-09 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 5e-09 | ||
| 3aox_A | 344 | X-Ray Crystal Structure Of Human Anaplastic Lymphom | 5e-09 | ||
| 2yjs_A | 342 | Structure Of C1156y Mutant Anaplastic Lymphoma Kina | 5e-09 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 5e-09 | ||
| 4fnz_A | 327 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 5e-09 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 6e-09 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 6e-09 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 6e-09 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 6e-09 | ||
| 4i1z_A | 329 | Crystal Structure Of The Monomeric (v948r) Form Of | 6e-09 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 6e-09 | ||
| 4dce_A | 333 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 6e-09 | ||
| 4euu_A | 319 | Structure Of Bx-795 Complexed With Human Tbk1 Kinas | 6e-09 | ||
| 3qqu_A | 301 | Cocrystal Structure Of Unphosphorylated Igf With Py | 6e-09 | ||
| 3w2o_A | 331 | Egfr Kinase Domain T790m/l858r Mutant With Tak-285 | 6e-09 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 6e-09 | ||
| 4eut_A | 396 | Structure Of Bx-795 Complexed With Unphosphorylated | 6e-09 | ||
| 3l9p_A | 367 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 6e-09 | ||
| 3lj0_A | 434 | Ire1 Complexed With Adp And Quercetin Length = 434 | 6e-09 | ||
| 4fob_A | 353 | Crystal Structure Of Human Anaplastic Lymphoma Kina | 7e-09 | ||
| 2itt_A | 327 | Crystal Structure Of Egfr Kinase Domain L858r Mutat | 7e-09 | ||
| 4fnx_A | 327 | Crystal Structure Of The Apo R1275q Anaplastic Lymp | 7e-09 | ||
| 2eb3_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (L8 | 7e-09 | ||
| 4i20_A | 329 | Crystal Structure Of Monomeric (v948r) Primary Onco | 7e-09 | ||
| 3lct_A | 344 | Crystal Structure Of The Anaplastic Lymphoma Kinase | 7e-09 | ||
| 1m7n_A | 322 | Crystal Structure Of Unactivated Apo Insulin-Like G | 7e-09 | ||
| 3i81_A | 315 | Crystal Structure Of Insulin-Like Growth Factor 1 R | 7e-09 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 7e-09 | ||
| 3ka0_A | 320 | Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4 | 7e-09 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 7e-09 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 8e-09 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 8e-09 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 8e-09 | ||
| 2oj9_A | 307 | Structure Of Igf-1r Kinase Domain Complexed With A | 8e-09 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 8e-09 | ||
| 3lvp_A | 336 | Crystal Structure Of Bisphosphorylated Igf1-R Kinas | 8e-09 | ||
| 3o23_A | 305 | Human Unphosphorylated Igf1-R Kinase Domain In Comp | 8e-09 | ||
| 1jqh_A | 308 | Igf-1 Receptor Kinase Domain Length = 308 | 9e-09 | ||
| 1b6c_B | 342 | Crystal Structure Of The Cytoplasmic Domain Of The | 9e-09 | ||
| 3udb_A | 317 | Crystal Structure Of Snrk2.6 Length = 317 | 9e-09 | ||
| 1py5_A | 326 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 9e-09 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 9e-09 | ||
| 3ug1_A | 334 | Crystal Structure Of The Mutated Egfr Kinase Domain | 9e-09 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 1e-08 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 1e-08 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 1e-08 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 1e-08 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 1e-08 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 1e-08 | ||
| 2itn_A | 327 | Crystal Structure Of Egfr Kinase Domain G719s Mutat | 1e-08 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 1e-08 | ||
| 2eb2_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (G7 | 1e-08 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 1e-08 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 1e-08 | ||
| 2wot_A | 306 | Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl) | 1e-08 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 1e-08 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 1e-08 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 1e-08 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 1e-08 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 1e-08 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 1e-08 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 1e-08 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 1e-08 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 1e-08 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 1e-08 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 1e-08 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 1e-08 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 1e-08 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 1e-08 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 1e-08 | ||
| 1vjy_A | 303 | Crystal Structure Of A Naphthyridine Inhibitor Of H | 1e-08 | ||
| 1rw8_A | 301 | Crystal Structure Of Tgf-Beta Receptor I Kinase Wit | 1e-08 | ||
| 3tzm_A | 309 | Tgf-Beta Receptor Type 1 In Complex With Sb431542 L | 1e-08 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 1e-08 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 1e-08 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 1e-08 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 1e-08 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 1e-08 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 1e-08 | ||
| 3d94_A | 301 | Crystal Structure Of The Insulin-Like Growth Factor | 1e-08 | ||
| 3uc4_A | 362 | The Crystal Structure Of Snf1-Related Kinase 2.6 Le | 2e-08 | ||
| 3ujg_A | 361 | Crystal Structure Of Snrk2.6 In Complex With Hab1 L | 2e-08 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 2e-08 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 2e-08 | ||
| 2i0v_A | 335 | C-Fms Tyrosine Kinase In Complex With A Quinolone I | 2e-08 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 2e-08 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 2e-08 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 2e-08 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 2e-08 | ||
| 3gqi_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-08 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 2e-08 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 2e-08 | ||
| 3gok_A | 334 | Binding Site Mapping Of Protein Ligands Length = 33 | 2e-08 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 2e-08 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 2e-08 | ||
| 1luf_A | 343 | Crystal Structure Of The Musk Tyrosine Kinase: Insi | 2e-08 | ||
| 2jbo_A | 326 | Protein Kinase Mk2 In Complex With An Inhibitor (Cr | 3e-08 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 3e-08 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 3e-08 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 3e-08 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 3e-08 | ||
| 3fpm_A | 325 | Crystal Structure Of A Squarate Inhibitor Bound To | 3e-08 | ||
| 2pzy_A | 324 | Structure Of Mk2 Complexed With Compound 76 Length | 3e-08 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 3e-08 | ||
| 2onl_C | 406 | Crystal Structure Of The P38a-Mapkap Kinase 2 Heter | 3e-08 | ||
| 3r2y_A | 319 | Mk2 Kinase Bound To Compound 1 Length = 319 | 3e-08 | ||
| 3r2b_A | 318 | Mk2 Kinase Bound To Compound 5b Length = 318 | 3e-08 | ||
| 1kwp_A | 400 | Crystal Structure Of Mapkap2 Length = 400 | 3e-08 | ||
| 3pls_A | 298 | Ron In Complex With Ligand Amp-Pnp Length = 298 | 3e-08 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 3e-08 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 3e-08 | ||
| 2pzr_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-08 | ||
| 2oza_A | 356 | Structure Of P38alpha Complex Length = 356 | 3e-08 | ||
| 3lco_A | 324 | Inhibitor Bound To A Dfg-Out Structure Of The Kinas | 3e-08 | ||
| 3kxx_A | 317 | Structure Of The Mutant Fibroblast Growth Factor Re | 3e-08 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 3e-08 | ||
| 2p3g_X | 327 | Crystal Structure Of A Pyrrolopyridine Inhibitor Bo | 3e-08 | ||
| 2pvy_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 3e-08 | ||
| 3fxi_A | 605 | Crystal Structure Of The Human Tlr4-Human Md-2-E.Co | 4e-08 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 4e-08 | ||
| 3cly_A | 334 | Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase | 5e-08 | ||
| 4g3d_A | 371 | Crystal Structure Of Human Nf-kappab Inducing Kinas | 5e-08 | ||
| 3tt0_A | 382 | Co-Structure Of Fibroblast Growth Factor Receptor 1 | 5e-08 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 5e-08 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 5e-08 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 6e-08 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 6e-08 | ||
| 2pvf_A | 334 | Crystal Structure Of Tyrosine Phosphorylated Activa | 6e-08 | ||
| 2oo8_X | 317 | Synthesis, Structural Analysis, And Sar Studies Of | 6e-08 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 7e-08 | ||
| 4g8a_A | 635 | Crystal Structure Of Human Tlr4 Polymorphic Variant | 7e-08 | ||
| 1fvr_A | 327 | Tie2 Kinase Domain Length = 327 | 7e-08 | ||
| 3js2_A | 317 | Crystal Structure Of Minimal Kinase Domain Of Fibro | 7e-08 | ||
| 4f63_A | 309 | Crystal Structure Of Human Fibroblast Growth Factor | 8e-08 | ||
| 3rhx_B | 306 | Crystal Structure Of The Catalytic Domain Of Fgfr1 | 8e-08 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 8e-08 | ||
| 2pzp_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 8e-08 | ||
| 1fgk_A | 310 | Crystal Structure Of The Tyrosine Kinase Domain Of | 8e-08 | ||
| 2pz5_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 9e-08 | ||
| 2psq_A | 370 | Crystal Structure Of Unphosphorylated Unactivated W | 9e-08 | ||
| 3ri1_A | 313 | Crystal Structure Of The Catalytic Domain Of Fgfr2 | 9e-08 | ||
| 2pml_X | 348 | Crystal Structure Of Pfpk7 In Complex With An Atp A | 1e-07 | ||
| 1gjo_A | 316 | The Fgfr2 Tyrosine Kinase Domain Length = 316 | 1e-07 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 1e-07 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 1e-07 | ||
| 1nxk_A | 400 | Crystal Structure Of Staurosporine Bound To Map Kap | 1e-07 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 1e-07 | ||
| 2pwl_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 1e-07 | ||
| 3cjg_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 1e-07 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 1e-07 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 1e-07 | ||
| 3zut_A | 362 | The Structure Of Ost1 (D160a) Kinase Length = 362 | 1e-07 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 1e-07 | ||
| 3cjf_A | 309 | Crystal Structure Of Vegfr2 In Complex With A 3,4,5 | 1e-07 | ||
| 3zuu_A | 362 | The Structure Of Ost1 (D160a, S175d) Kinase In Comp | 1e-07 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 1e-07 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 1e-07 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 1e-07 | ||
| 3gql_A | 326 | Crystal Structure Of Activated Receptor Tyrosine Ki | 2e-07 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 2e-07 | ||
| 3c4f_A | 302 | Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M | 2e-07 | ||
| 4dn5_A | 356 | Crystal Structure Of Nf-kb-inducing Kinase (nik) Le | 2e-07 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 2e-07 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 2e-07 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 2e-07 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 2e-07 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 2e-07 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 2e-07 | ||
| 2z8c_A | 303 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 2e-07 | ||
| 1rqq_A | 306 | Crystal Structure Of The Insulin Receptor Kinase In | 2e-07 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 2e-07 | ||
| 1ir3_A | 306 | Phosphorylated Insulin Receptor Tyrosine Kinase In | 2e-07 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 2e-07 | ||
| 3hko_A | 345 | Crystal Structure Of A Cdpk Kinase Domain From Cryp | 2e-07 | ||
| 4g3g_A | 350 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 2e-07 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 2e-07 | ||
| 2hw6_A | 307 | Crystal Structure Of Mnk1 Catalytic Domain Length = | 2e-07 | ||
| 2qr7_A | 342 | 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of | 2e-07 | ||
| 4g3f_A | 336 | Crystal Structure Of Murine Nf-kappab Inducing Kina | 2e-07 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 2e-07 | ||
| 2wqb_A | 324 | Structure Of The Tie2 Kinase Domain In Complex With | 3e-07 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 3e-07 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 3e-07 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 3e-07 | ||
| 2oh4_A | 316 | Crystal Structure Of Vegfr2 With A Benzimidazole-Ur | 3e-07 | ||
| 3eta_A | 317 | Kinase Domain Of Insulin Receptor Complexed With A | 3e-07 | ||
| 4g3c_A | 352 | Crystal Structure Of Apo Murine Nf-kappab Inducing | 3e-07 | ||
| 3c7q_A | 316 | Structure Of Vegfr2 Kinase Domain In Complex With B | 3e-07 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 3e-07 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 3e-07 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 3e-07 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 3e-07 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 3e-07 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 3e-07 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 3e-07 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 3e-07 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 3e-07 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 3e-07 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 3e-07 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 4e-07 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 4e-07 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 4e-07 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 4e-07 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 4e-07 | ||
| 2p0c_A | 313 | Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro | 4e-07 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 4e-07 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 4e-07 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 4e-07 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 4e-07 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 4e-07 | ||
| 2q0b_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 4e-07 | ||
| 1irk_A | 306 | Crystal Structure Of The Tyrosine Kinase Domain Of | 4e-07 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 4e-07 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 4e-07 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 4e-07 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 4e-07 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 4e-07 | ||
| 3pfq_A | 674 | Crystal Structure And Allosteric Activation Of Prot | 4e-07 | ||
| 3mdy_A | 337 | Crystal Structure Of The Cytoplasmic Domain Of The | 4e-07 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 4e-07 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 4e-07 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 4e-07 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 5e-07 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 5e-07 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 5e-07 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 5e-07 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 5e-07 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 5e-07 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 5e-07 | ||
| 1i44_A | 306 | Crystallographic Studies Of An Activation Loop Muta | 5e-07 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 5e-07 | ||
| 3gu4_A | 295 | Crystal Structure Of Dapkq23v-Amppnp Length = 295 | 5e-07 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 5e-07 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 5e-07 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 5e-07 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 5e-07 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 6e-07 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 6e-07 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 6e-07 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 6e-07 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 6e-07 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 6e-07 | ||
| 2py3_A | 324 | Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D | 6e-07 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 6e-07 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 6e-07 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 6e-07 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 6e-07 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 6e-07 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 6e-07 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 6e-07 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 6e-07 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 6e-07 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 7e-07 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 7e-07 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 7e-07 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 7e-07 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 7e-07 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 7e-07 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 7e-07 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 7e-07 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 7e-07 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 7e-07 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 7e-07 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 7e-07 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 7e-07 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 7e-07 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 7e-07 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 7e-07 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 7e-07 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 7e-07 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 7e-07 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 7e-07 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 7e-07 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 7e-07 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 7e-07 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 7e-07 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 7e-07 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 7e-07 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 7e-07 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 7e-07 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 7e-07 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 7e-07 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 8e-07 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 8e-07 | ||
| 3gu8_A | 295 | Crystal Structure Of Dapkl93g With N6-Cyclopentylad | 8e-07 | ||
| 4gt4_A | 308 | Structure Of Unliganded, Inactive Ror2 Kinase Domai | 8e-07 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 8e-07 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 8e-07 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 8e-07 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 8e-07 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 8e-07 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 8e-07 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 8e-07 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 9e-07 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 9e-07 | ||
| 3zzw_A | 289 | Crystal Structure Of The Kinase Domain Of Ror2 Leng | 1e-06 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 1e-06 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 1e-06 | ||
| 3fhr_A | 336 | High Resolution Crystal Structure Of Mitogen-Activa | 1e-06 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 1e-06 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 1e-06 | ||
| 3r1n_A | 317 | Mk3 Kinase Bound To Compound 5b Length = 317 | 1e-06 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 1e-06 | ||
| 3dls_A | 335 | Crystal Structure Of Human Pas Kinase Bound To Adp | 1e-06 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 1e-06 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 1e-06 | ||
| 3ekk_A | 307 | Insulin Receptor Kinase Complexed With An Inhibitor | 1e-06 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 1e-06 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 1e-06 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 1e-06 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 1e-06 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 1e-06 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 1e-06 | ||
| 1p14_A | 306 | Crystal Structure Of A Catalytic-Loop Mutant Of The | 2e-06 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 2e-06 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 2e-06 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 2e-06 | ||
| 3fzo_A | 277 | Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin | 2e-06 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 2e-06 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 2e-06 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 2e-06 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 2e-06 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 2e-06 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 2e-06 | ||
| 3qup_A | 323 | Inhibitor Bound Structure Of The Kinase Domain Of T | 2e-06 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 2e-06 | ||
| 2ac5_A | 316 | Structure Of Human Mnk2 Kinase Domain Mutant D228g | 2e-06 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 2e-06 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 2e-06 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 2e-06 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 2e-06 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 2e-06 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 2e-06 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 2e-06 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 2e-06 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 2e-06 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 3e-06 | ||
| 3rfs_A | 272 | Design Of A Binding Scaffold Based On Variable Lymp | 3e-06 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 3e-06 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 3e-06 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 3e-06 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 3e-06 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 3e-06 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 3e-06 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 3e-06 | ||
| 3p23_A | 432 | Crystal Structure Of The Human Kinase And Rnase Dom | 3e-06 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 3e-06 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 3e-06 | ||
| 2z66_A | 306 | Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 A | 3e-06 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 3e-06 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 3e-06 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 3e-06 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 4e-06 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 4e-06 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 4e-06 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 4e-06 | ||
| 2i6l_A | 320 | Crystal Structure Of Human Mitogen Activated Protei | 4e-06 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 4e-06 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 4e-06 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 4e-06 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 4e-06 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 5e-06 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 5e-06 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 5e-06 | ||
| 2vd5_A | 412 | Structure Of Human Myotonic Dystrophy Protein Kinas | 5e-06 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 5e-06 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 5e-06 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 5e-06 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 5e-06 | ||
| 3mfr_A | 351 | Cask-4m Cam Kinase Domain, Native Length = 351 | 6e-06 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 6e-06 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 6e-06 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 6e-06 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 6e-06 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 7e-06 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 7e-06 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 7e-06 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 7e-06 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 7e-06 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 7e-06 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 8e-06 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 8e-06 | ||
| 2buj_A | 317 | Crystal Structure Of The Human Serine-Threonine Kin | 8e-06 | ||
| 1y6a_A | 366 | Crystal Structure Of Vegfr2 In Complex With A 2-Ani | 8e-06 | ||
| 3vhe_A | 359 | Crystal Structure Of Human Vegfr2 Kinase Domain Wit | 8e-06 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 8e-06 | ||
| 3vid_A | 356 | Crystal Structure Of Human Vegfr2 Kinase Domain Wit | 9e-06 | ||
| 3vhk_A | 368 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 9e-06 | ||
| 1rjb_A | 344 | Crystal Structure Of Flt3 Length = 344 | 1e-05 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 1e-05 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 1e-05 | ||
| 2ac3_A | 316 | Structure Of Human Mnk2 Kinase Domain Length = 316 | 1e-05 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 1e-05 | ||
| 3qfv_A | 415 | Mrck Beta In Complex With Tpca-1 Length = 415 | 1e-05 | ||
| 2wtk_C | 305 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 1e-05 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 1e-05 | ||
| 3tku_A | 433 | Mrck Beta In Complex With Fasudil Length = 433 | 2e-05 | ||
| 3pg1_A | 362 | Map Kinase Lmampk10 From Leishmania Major (1.95 Ang | 2e-05 | ||
| 3ama_A | 351 | Protein Kinase A Sixfold Mutant Model Of Aurora B W | 2e-05 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 2e-05 | ||
| 3enm_A | 316 | The Structure Of The Map2k Mek6 Reveals An Autoinhi | 2e-05 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 2e-05 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 2e-05 | ||
| 3uib_A | 362 | Map Kinase Lmampk10 From Leishmania Major In Comple | 2e-05 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 2e-05 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 2e-05 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 2e-05 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 2e-05 | ||
| 2z63_A | 570 | Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 A | 2e-05 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 2e-05 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 3e-05 | ||
| 1q61_A | 350 | Pka Triple Mutant Model Of Pkb Length = 350 | 4e-05 | ||
| 2vo0_A | 351 | Structure Of Pka-Pkb Chimera Complexed With C-(4-(4 | 4e-05 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 4e-05 | ||
| 2jdt_A | 351 | Structure Of Pka-Pkb Chimera Complexed With Isoquin | 4e-05 | ||
| 4a7c_A | 308 | Crystal Structure Of Pim1 Kinase With Etp46546 Leng | 4e-05 | ||
| 3hng_A | 360 | Crystal Structure Of Vegfr1 In Complex With N-(4-ch | 4e-05 | ||
| 2obj_A | 333 | Crystal Structure Of Human Pim-1 Kinase In Complex | 4e-05 | ||
| 1yxs_A | 293 | Crystal Structure Of Kinase Pim1 With P123m Mutatio | 4e-05 | ||
| 4as0_A | 273 | Cyclometalated Phthalimides As Protein Kinase Inhib | 4e-05 | ||
| 3c4e_A | 273 | Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7 | 4e-05 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 4e-05 | ||
| 3l9m_A | 351 | Crystal Structure Of Pkab3 (Pka Triple Mutant V123a | 4e-05 | ||
| 3dcv_A | 328 | Crystal Structure Of Human Pim1 Kinase Complexed Wi | 4e-05 | ||
| 3a99_A | 320 | Structure Of Pim-1 Kinase Crystallized In The Prese | 5e-05 | ||
| 4alu_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 5e-05 | ||
| 4dtk_A | 276 | Novel And Selective Pan-Pim Kinase Inhibitor Length | 5e-05 | ||
| 2gu8_A | 337 | Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel | 5e-05 | ||
| 2bik_B | 313 | Human Pim1 Phosphorylated On Ser261 Length = 313 | 5e-05 | ||
| 4alv_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 5e-05 | ||
| 3ma3_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 5e-05 | ||
| 2j2i_B | 312 | Crystal Structure Of The Humab Pim1 In Complex With | 5e-05 | ||
| 1q24_A | 350 | Pka Double Mutant Model Of Pkb In Complex With Mgat | 5e-05 | ||
| 1ywv_A | 293 | Crystal Structures Of Proto-Oncogene Kinase Pim1: A | 5e-05 | ||
| 2bil_B | 313 | The Human Protein Kinase Pim1 In Complex With Its C | 5e-05 | ||
| 3cy3_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 5e-05 | ||
| 3cxw_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 5e-05 | ||
| 1xws_A | 313 | Crystal Structure Of The Human Pim1 Kinase Domain L | 5e-05 | ||
| 3jpv_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 5e-05 | ||
| 3jxw_A | 294 | Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4- | 5e-05 | ||
| 3uix_A | 298 | Crystal Structure Of Pim1 Kinase In Complex With Sm | 5e-05 | ||
| 2xiy_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-2 Fro | 5e-05 | ||
| 1ctp_E | 350 | Structure Of The Mammalian Catalytic Subunit Of Cam | 5e-05 | ||
| 2qur_A | 350 | Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe | 5e-05 | ||
| 2xix_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-1 Fro | 5e-05 | ||
| 1bkx_A | 350 | A Binary Complex Of The Catalytic Subunit Of Camp-D | 5e-05 | ||
| 1cdk_A | 350 | Camp-Dependent Protein Kinase Catalytic Subunit (E. | 6e-05 | ||
| 3f2a_A | 300 | Crystal Structure Of Human Pim-1 In Complex With Da | 6e-05 | ||
| 2z64_A | 599 | Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Comp | 6e-05 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 6e-05 | ||
| 1j3h_A | 350 | Crystal Structure Of Apoenzyme Camp-Dependent Prote | 6e-05 | ||
| 1fmo_E | 350 | Crystal Structure Of A Polyhistidine-Tagged Recombi | 6e-05 | ||
| 2xj0_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-4 Fro | 6e-05 | ||
| 1cmk_E | 350 | Crystal Structures Of The Myristylated Catalytic Su | 6e-05 | ||
| 1ydt_E | 350 | Structure Of Camp-Dependent Protein Kinase, Alpha-C | 6e-05 | ||
| 3qal_E | 350 | Crystal Structure Of Arg280ala Mutant Of Catalytic | 6e-05 | ||
| 1jbp_E | 350 | Crystal Structure Of The Catalytic Subunit Of Camp- | 6e-05 | ||
| 1xqz_A | 300 | Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut | 6e-05 | ||
| 2erz_E | 351 | Crystal Structure Of C-amp Dependent Kinase (pka) B | 6e-05 | ||
| 3r00_A | 299 | The Discovery Of Novel Benzofuran-2-Carboxylic Acid | 6e-05 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 6e-05 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 6e-05 | ||
| 3vq1_A | 606 | Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLE | 7e-05 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 8e-05 | ||
| 3mvj_A | 371 | Human Cyclic Amp-Dependent Protein Kinase Pka Inhib | 8e-05 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 8e-05 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 8e-05 | ||
| 1xh7_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 8e-05 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 8e-05 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 8e-05 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 8e-05 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 8e-05 | ||
| 4dg3_E | 371 | Crystal Structure Of R336a Mutant Of Camp-dependent | 8e-05 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 9e-05 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 9e-05 | ||
| 3agm_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 9e-05 | ||
| 4dfx_E | 350 | Crystal Structure Of Myristoylated K7c Catalytic Su | 9e-05 |
| >pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349 | Back alignment and structure |
|
| >pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1 Ectodomain Length = 772 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1 Length = 768 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase Inhibiting Protein), A Leucine Rich Repeat Protein Involved In Plant Defense Length = 313 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341 | Back alignment and structure |
|
| >pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276 | Back alignment and structure |
|
| >pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273 | Back alignment and structure |
|
| >pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291 | Back alignment and structure |
|
| >pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284 | Back alignment and structure |
|
| >pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288 | Back alignment and structure |
|
| >pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277 | Back alignment and structure |
|
| >pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270 | Back alignment and structure |
|
| >pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277 | Back alignment and structure |
|
| >pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293 | Back alignment and structure |
|
| >pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277 | Back alignment and structure |
|
| >pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377 | Back alignment and structure |
|
| >pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287 | Back alignment and structure |
|
| >pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271 | Back alignment and structure |
|
| >pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292 | Back alignment and structure |
|
| >pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267 | Back alignment and structure |
|
| >pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273 | Back alignment and structure |
|
| >pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635 | Back alignment and structure |
|
| >pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293 | Back alignment and structure |
|
| >pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299 | Back alignment and structure |
|
| >pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a) Kinase Domain In Complex With Dorsomorphin Length = 322 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276 | Back alignment and structure |
|
| >pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314 | Back alignment and structure |
|
| >pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282 | Back alignment and structure |
|
| >pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281 | Back alignment and structure |
|
| >pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX Length = 462 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex Length = 462 | Back alignment and structure |
|
| >pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX Length = 462 | Back alignment and structure |
|
| >pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318 | Back alignment and structure |
|
| >pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex Length = 466 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex Length = 461 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human) Recognition Complex Length = 466 | Back alignment and structure |
|
| >pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361 | Back alignment and structure |
|
| >pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309 | Back alignment and structure |
|
| >pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306 | Back alignment and structure |
|
| >pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302 | Back alignment and structure |
|
| >pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310 | Back alignment and structure |
|
| >pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325 | Back alignment and structure |
|
| >pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312 | Back alignment and structure |
|
| >pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287 | Back alignment and structure |
|
| >pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364 | Back alignment and structure |
|
| >pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331 | Back alignment and structure |
|
| >pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324 | Back alignment and structure |
|
| >pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329 | Back alignment and structure |
|
| >pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434 | Back alignment and structure |
|
| >pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330 | Back alignment and structure |
|
| >pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290 | Back alignment and structure |
|
| >pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352 | Back alignment and structure |
|
| >pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327 | Back alignment and structure |
|
| >pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330 | Back alignment and structure |
|
| >pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333 | Back alignment and structure |
|
| >pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337 | Back alignment and structure |
|
| >pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613 | Back alignment and structure |
|
| >pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344 | Back alignment and structure |
|
| >pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319 | Back alignment and structure |
|
| >pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301 | Back alignment and structure |
|
| >pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396 | Back alignment and structure |
|
| >pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367 | Back alignment and structure |
|
| >pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434 | Back alignment and structure |
|
| >pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353 | Back alignment and structure |
|
| >pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327 | Back alignment and structure |
|
| >pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327 | Back alignment and structure |
|
| >pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329 | Back alignment and structure |
|
| >pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344 | Back alignment and structure |
|
| >pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322 | Back alignment and structure |
|
| >pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336 | Back alignment and structure |
|
| >pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305 | Back alignment and structure |
|
| >pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I Tgf-Beta Receptor In Complex With Fkbp12 Length = 342 | Back alignment and structure |
|
| >pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317 | Back alignment and structure |
|
| >pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3- Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine Length = 306 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human Tgf- Beta Type I Receptor Length = 303 | Back alignment and structure |
|
| >pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp Site Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542 Length = 309 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301 | Back alignment and structure |
|
| >pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362 | Back alignment and structure |
|
| >pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343 | Back alignment and structure |
|
| >pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325 | Back alignment and structure |
|
| >pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406 | Back alignment and structure |
|
| >pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319 | Back alignment and structure |
|
| >pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318 | Back alignment and structure |
|
| >pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400 | Back alignment and structure |
|
| >pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356 | Back alignment and structure |
|
| >pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324 | Back alignment and structure |
|
| >pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327 | Back alignment and structure |
|
| >pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps Ra Complex Length = 605 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334 | Back alignment and structure |
|
| >pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371 | Back alignment and structure |
|
| >pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334 | Back alignment and structure |
|
| >pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g And T399i In Complex With Md-2 And Lps Length = 635 | Back alignment and structure |
|
| >pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327 | Back alignment and structure |
|
| >pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317 | Back alignment and structure |
|
| >pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309 | Back alignment and structure |
|
| >pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310 | Back alignment and structure |
|
| >pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370 | Back alignment and structure |
|
| >pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313 | Back alignment and structure |
|
| >pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348 | Back alignment and structure |
|
| >pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324 | Back alignment and structure |
|
| >pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309 | Back alignment and structure |
|
| >pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302 | Back alignment and structure |
|
| >pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303 | Back alignment and structure |
|
| >pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345 | Back alignment and structure |
|
| >pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307 | Back alignment and structure |
|
| >pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342 | Back alignment and structure |
|
| >pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316 | Back alignment and structure |
|
| >pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317 | Back alignment and structure |
|
| >pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352 | Back alignment and structure |
|
| >pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674 | Back alignment and structure |
|
| >pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295 | Back alignment and structure |
|
| >pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte Receptors Of Jawless Vertebrates By Module Engineering Length = 272 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And Hagfish Vlrb.61 Length = 306 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16 In Complex With Staurosporine Length = 317 | Back alignment and structure |
|
| >pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356 | Back alignment and structure |
|
| >pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368 | Back alignment and structure |
|
| >pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415 | Back alignment and structure |
|
| >pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433 | Back alignment and structure |
|
| >pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362 | Back alignment and structure |
|
| >pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And Hagfish Vlrb.61 Length = 570 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350 | Back alignment and structure |
|
| >pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351 | Back alignment and structure |
|
| >pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308 | Back alignment and structure |
|
| >pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360 | Back alignment and structure |
|
| >pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293 | Back alignment and structure |
|
| >pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273 | Back alignment and structure |
|
| >pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351 | Back alignment and structure |
|
| >pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328 | Back alignment and structure |
|
| >pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320 | Back alignment and structure |
|
| >pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337 | Back alignment and structure |
|
| >pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313 | Back alignment and structure |
|
| >pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313 | Back alignment and structure |
|
| >pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312 | Back alignment and structure |
|
| >pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350 | Back alignment and structure |
|
| >pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293 | Back alignment and structure |
|
| >pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313 | Back alignment and structure |
|
| >pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314 | Back alignment and structure |
|
| >pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314 | Back alignment and structure |
|
| >pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313 | Back alignment and structure |
|
| >pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313 | Back alignment and structure |
|
| >pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294 | Back alignment and structure |
|
| >pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350 | Back alignment and structure |
|
| >pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350 | Back alignment and structure |
|
| >pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350 | Back alignment and structure |
|
| >pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300 | Back alignment and structure |
|
| >pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex Length = 599 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350 | Back alignment and structure |
|
| >pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350 | Back alignment and structure |
|
| >pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350 | Back alignment and structure |
|
| >pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350 | Back alignment and structure |
|
| >pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300 | Back alignment and structure |
|
| >pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351 | Back alignment and structure |
|
| >pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX Length = 606 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351 | Back alignment and structure |
|
| >pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 673 | |||
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 1e-101 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 3e-88 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 3e-84 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 9e-74 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 2e-64 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 8e-53 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 5e-28 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 1e-91 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 2e-81 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 2e-79 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 3e-69 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 4e-59 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 8e-49 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 6e-74 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 4e-65 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 3e-61 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 4e-61 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 2e-58 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 8e-41 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 4e-24 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 1e-07 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 7e-65 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 1e-60 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-60 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 2e-59 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 3e-57 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 4e-57 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 7e-49 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 1e-42 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 3e-34 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 3e-29 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 6e-59 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 7e-59 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 4e-57 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 1e-55 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 8e-48 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 1e-46 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 5e-29 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 4e-20 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 2e-11 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 5e-57 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 6e-47 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 2e-46 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 3e-46 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 1e-45 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 1e-37 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 8e-29 | |
| 3fxi_A | 605 | TLR4, htoll, TOLL-like receptor 4; leucine rich re | 7e-19 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 6e-56 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 1e-54 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 7e-51 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 8e-51 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 1e-50 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 3e-50 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 6e-50 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 4e-49 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 4e-48 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 6e-45 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 3e-39 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 2e-31 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 2e-31 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 2e-50 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 2e-49 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 4e-49 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 6e-47 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 2e-41 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 2e-41 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 7e-39 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 2e-36 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 3e-34 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 3e-48 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 4e-47 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 6e-45 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 2e-30 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 3e-25 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 2e-05 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 6e-47 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 2e-46 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 3e-46 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 8e-46 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 2e-43 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 2e-42 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 1e-40 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 1e-40 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 2e-39 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 6e-39 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 6e-37 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 8e-46 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 4e-45 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 6e-45 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 2e-41 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 9e-38 | |
| 3jqh_A | 167 | C-type lectin domain family 4 member M; DC-signr, | 1e-34 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 3e-41 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 5e-40 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 1e-39 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 2e-39 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 2e-32 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 8e-26 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 3e-41 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 2e-38 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 1e-30 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 4e-21 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 2e-39 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 1e-33 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 8e-28 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 5e-22 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 5e-14 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 6e-39 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 2e-38 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 6e-38 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 4e-36 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 1e-21 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 1e-38 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 6e-38 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 3e-36 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 3e-35 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 4e-30 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 1e-20 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 3e-37 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 7e-37 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 1e-34 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 6e-34 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 2e-32 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 2e-31 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 5e-36 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 3e-34 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 7e-32 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 1e-25 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 3e-35 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 1e-33 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 5e-27 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 2e-20 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 3e-07 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 5e-35 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-34 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 5e-31 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-30 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 4e-29 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 2e-25 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-05 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 9e-35 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 3e-34 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 4e-34 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 1e-32 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 1e-25 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 2e-22 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 1e-18 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 7e-34 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 1e-33 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 1e-33 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 2e-33 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 3e-33 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 1e-31 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 7e-27 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 6e-24 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 1e-23 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 3e-18 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 9e-07 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 3e-33 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 2e-32 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 9e-27 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 6e-16 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 2e-14 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 4e-33 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 3e-31 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 2e-25 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 1e-20 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 5e-33 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 5e-33 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 5e-33 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 5e-33 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 6e-33 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 8e-33 | |
| 4apc_A | 350 | Serine/threonine-protein kinase NEK1; transferase; | 1e-32 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 1e-32 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 2e-32 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 1e-31 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 3e-31 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 3e-31 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 3e-31 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 4e-31 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 5e-31 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 1e-28 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 6e-21 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 2e-04 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 5e-31 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 9e-31 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 1e-30 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 2e-30 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 3e-30 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 3e-30 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 1e-27 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 5e-25 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 3e-19 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 9e-30 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 2e-29 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 1e-27 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 2e-27 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 4e-19 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 4e-06 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 1e-29 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 1e-29 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 2e-29 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 2e-29 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 2e-29 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 2e-29 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 1e-22 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 2e-21 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 5e-19 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 3e-09 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 7e-07 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 2e-29 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 2e-29 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 3e-29 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 5e-13 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 4e-29 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 4e-29 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 5e-29 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 6e-29 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 6e-29 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 6e-29 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 6e-29 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 3e-18 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 5e-18 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 1e-17 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 2e-13 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 6e-11 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 3e-06 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 1e-28 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 1e-28 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 2e-28 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 2e-28 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 3e-22 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 8e-20 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 2e-28 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 2e-28 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 2e-28 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 3e-20 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 1e-12 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 2e-28 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 2e-28 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 3e-28 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 6e-22 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 1e-17 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 6e-17 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 3e-16 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 8e-16 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 1e-14 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 2e-14 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 3e-28 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 3e-28 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 4e-28 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 6e-28 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 7e-28 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 8e-28 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 1e-27 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 1e-27 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 1e-27 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 1e-27 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 1e-27 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 2e-27 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 2e-27 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 2e-27 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 3e-27 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 3e-27 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 6e-27 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 6e-27 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 6e-27 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 6e-27 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 6e-27 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 7e-27 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 8e-27 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 8e-27 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 9e-27 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 9e-27 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 1e-26 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 1e-26 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 1e-26 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 1e-26 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 1e-26 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 1e-26 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 2e-26 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 2e-26 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 2e-26 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 2e-26 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 3e-26 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 4e-25 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 8e-25 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 1e-19 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 2e-13 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 3e-26 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 3e-26 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 3e-26 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 6e-26 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 8e-26 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 9e-26 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 1e-25 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 2e-25 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 2e-21 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 2e-17 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 1e-04 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 2e-25 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 2e-25 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 2e-25 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 2e-25 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 3e-23 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 3e-14 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 4e-12 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 2e-08 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 3e-25 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 3e-25 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 4e-25 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 4e-25 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 6e-25 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 6e-25 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 6e-25 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 7e-25 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 1e-24 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 1e-24 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 2e-24 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 2e-24 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 2e-24 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 2e-24 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 3e-24 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 3e-24 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 1e-20 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 1e-20 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 1e-16 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 3e-16 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 5e-16 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 2e-13 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 4e-12 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 3e-10 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 1e-05 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 4e-24 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 5e-24 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 6e-24 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 2e-23 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 3e-23 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 5e-23 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 6e-23 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 1e-22 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 3e-22 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 4e-20 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 8e-17 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 4e-15 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 6e-12 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 1e-22 | |
| 3v5q_A | 297 | NT-3 growth factor receptor; kinase domain, kinase | 2e-22 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 2e-22 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 3e-22 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 3e-22 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 4e-20 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 2e-14 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 4e-11 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 4e-22 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 4e-22 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 5e-22 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 5e-22 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 9e-22 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 9e-22 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 1e-21 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 9e-21 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-13 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 3e-09 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 1e-21 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 1e-21 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 1e-21 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 2e-21 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 2e-19 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 2e-12 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 3e-21 | |
| 3zzw_A | 289 | Tyrosine-protein kinase transmembrane receptor RO; | 1e-20 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 2e-20 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 1e-19 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 6e-18 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 8e-11 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 2e-20 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 5e-20 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 2e-19 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 2e-19 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 3e-19 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 3e-19 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 5e-19 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 5e-19 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-18 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-15 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 2e-13 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 1e-09 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 5e-07 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 5e-19 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 6e-19 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 7e-19 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 8e-19 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 5e-15 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 6e-15 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 7e-11 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 9e-08 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 1e-18 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 1e-18 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 2e-18 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 5e-15 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 1e-14 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 9e-13 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 1e-08 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 4e-07 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 2e-18 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 3e-18 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 5e-18 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 5e-17 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 3e-11 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 1e-07 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 3e-18 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 8e-16 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 1e-11 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 3e-08 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 8e-18 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 9e-18 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 1e-17 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 1e-17 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 8e-15 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 3e-05 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 4e-17 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 4e-17 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 1e-16 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 2e-16 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 2e-16 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 3e-16 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 3e-16 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 4e-16 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 2e-15 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 3e-15 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 6e-15 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 7e-15 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 7e-15 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 8e-15 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-12 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 5e-11 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 8e-10 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 2e-08 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 5e-08 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 7e-07 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 1e-14 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 1e-14 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 1e-14 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 2e-14 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 5e-14 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 1e-11 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 3e-10 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 2e-06 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 2e-06 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 6e-14 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 5e-09 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 7e-08 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 1e-13 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 2e-13 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 2e-13 | |
| 1uu3_A | 310 | HPDK1, 3-phosphoinositide dependent protein kinase | 2e-13 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 2e-13 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 3e-13 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 3e-13 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 3e-13 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 4e-13 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 4e-13 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 5e-13 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 5e-13 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 7e-13 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 9e-13 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 1e-12 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 1e-12 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 1e-12 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 2e-10 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 2e-07 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 5e-07 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 2e-12 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 6e-12 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 7e-12 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 1e-10 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 2e-07 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 6e-07 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 7e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-05 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 9e-12 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 2e-10 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 4e-07 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 3e-04 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 3e-11 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 5e-10 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 2e-06 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 4e-11 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 1e-07 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 2e-07 | |
| 3pvu_A | 695 | Beta-adrenergic receptor kinase 1; transferase, se | 4e-11 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 5e-11 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 5e-11 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 6e-11 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 7e-11 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 7e-11 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 1e-10 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 1e-09 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 2e-08 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 8e-08 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 1e-10 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 5e-09 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 2e-08 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 3e-08 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 8e-07 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 2e-10 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 1e-08 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 1e-04 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 2e-04 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-10 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 4e-08 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 3e-07 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 6e-04 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 6e-04 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 2e-10 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 2e-04 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 3e-10 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 1e-08 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 9e-06 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 4e-10 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 5e-10 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 6e-10 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 2e-07 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 2e-04 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 9e-10 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 9e-07 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 1e-04 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 1e-09 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 2e-09 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 5e-09 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 4e-07 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 4e-04 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 2e-09 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 3e-09 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 4e-09 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 4e-09 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 5e-09 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 5e-09 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 5e-09 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 7e-09 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 1e-08 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 2e-08 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 3e-08 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 3e-08 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 3e-08 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 4e-08 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 5e-08 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 6e-08 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 7e-05 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 9e-05 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 1e-04 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 4e-04 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 7e-08 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 9e-08 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 5e-06 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 5e-04 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 1e-07 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 1e-07 | |
| 3g51_A | 325 | Ribosomal protein S6 kinase alpha-3; N-terminal ki | 2e-07 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 2e-07 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 3e-07 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 4e-07 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 7e-07 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 1e-06 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 2e-06 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 2e-06 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 9e-06 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 5e-05 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 8e-05 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 1e-05 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 6e-05 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 1e-05 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 3e-04 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 6e-04 |
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 325 bits (836), Expect = e-101
Identities = 102/319 (31%), Positives = 151/319 (47%), Gaps = 6/319 (1%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N+LSG IP S+G+ + L+ L L+ N L G +P E+ + L L +D N L G+IP L
Sbjct: 428 NYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLS 487
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
N +LN + L N LTG I + G NL L +S+N+F G I + G C+ L L+ +
Sbjct: 488 NCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNT 547
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVL--NGNKLSGNLPRV 179
N G+IP + K + N I G+ + + N N + G
Sbjct: 548 NLFNGTIPAAMFKQ----SGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQ 603
Query: 180 LGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDL 239
L LS ++++ G T N + +L++S N P E+ + L L+L
Sbjct: 604 LNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNL 663
Query: 240 SHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNS 299
HN + G IP ++ +L L L++S N L G IP + L+ ID+S N L G IP
Sbjct: 664 GHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM 723
Query: 300 TGFQYDPIQALRGNRGLCG 318
F+ P N GLCG
Sbjct: 724 GQFETFPPAKFLNNPGLCG 742
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 291 bits (747), Expect = 3e-88
Identities = 96/305 (31%), Positives = 143/305 (46%), Gaps = 9/305 (2%)
Query: 2 NHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPR-S 59
N +G IP + G L GL L N G+VP G+ L +L + +N G++P +
Sbjct: 279 NKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDT 338
Query: 60 LRNLASLNRVHLEQNHLTGNISEVFG-IYPNLTFLDISHNNFYGEIWSSWGKCQ--QLGT 116
L + L + L N +G + E + +L LD+S NNF G I + + L
Sbjct: 339 LLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQE 398
Query: 117 LNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNL 176
L N TG IPP + +L L S N + G IP LG+L L L L N L G +
Sbjct: 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEI 458
Query: 177 PRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSE 236
P+ L + LE L L N L+G IP L N +++++LSNN+ E P + +L L+
Sbjct: 459 PQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAI 518
Query: 237 LDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLI 296
L LS+N G IP ++ + SL L+++ N +G IP+ I+ N + G
Sbjct: 519 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM----FKQSGKIAANFIAGKR 574
Query: 297 PNSTG 301
Sbjct: 575 YVYIK 579
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 280 bits (718), Expect = 3e-84
Identities = 98/326 (30%), Positives = 152/326 (46%), Gaps = 26/326 (7%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGE-IGNLMQLTNLEIDNNQLFGQIPRSL 60
NH GA+PP G+ + L+ L L SN+ SG +P + + + L L++ N+ G++P SL
Sbjct: 304 NHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESL 363
Query: 61 RNL-ASLNRVHLEQNHLTGNISEVFGIYP--NLTFLDISHNNFYGEIWSSWGKCQQLGTL 117
NL ASL + L N+ +G I P L L + +N F G+I + C +L +L
Sbjct: 364 TNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSL 423
Query: 118 NFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLP 177
+ S N ++G+IP +G L +L L LN + GEIP EL +K+L L+L+ N L+G +P
Sbjct: 424 HLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIP 483
Query: 178 RVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSEL 237
L + + L ++ LS N+L+G IP+ +G L + L LSNN F P EL L L
Sbjct: 484 SGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWL 543
Query: 238 DLSHNFLGGEIPPQICNLESLEKLN----------------------VSHNNLSGLIPSC 275
DL+ N G IP + N + G+
Sbjct: 544 DLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQ 603
Query: 276 FEGMHGLSCIDISYNELLGLIPNSTG 301
+ + +I+ G +
Sbjct: 604 LNRLSTRNPCNITSRVYGGHTSPTFD 629
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 252 bits (645), Expect = 9e-74
Identities = 98/306 (32%), Positives = 151/306 (49%), Gaps = 14/306 (4%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIP--RS 59
N A+ S+ + T L+ L+L ++ ++GSV LT+L++ N L G + S
Sbjct: 63 NVGFSAVSSSLLSLTGLESLFLSNSHINGSVS-GFKCSASLTSLDLSRNSLSGPVTTLTS 121
Query: 60 LRNLASLNRVHLEQNHLTGNIS-EVFGIYPNLTFLDISHNNFYGEIWSSW---GKCQQLG 115
L + + L +++ N L +L LD+S N+ G W C +L
Sbjct: 122 LGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELK 181
Query: 116 TLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175
L S N I+G + + + L LD S N IP LG+ +L +L ++GNKLSG+
Sbjct: 182 HLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLSGD 238
Query: 176 LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELE-KLVQL 234
R + + +EL+ L++S+N+ G IP L + YL+L+ N+F E P L L
Sbjct: 239 FSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTL 296
Query: 235 SELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIP-SCFEGMHGLSCIDISYNELL 293
+ LDLS N G +PP + LE L +S NN SG +P M GL +D+S+NE
Sbjct: 297 TGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFS 356
Query: 294 GLIPNS 299
G +P S
Sbjct: 357 GELPES 362
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 226 bits (578), Expect = 2e-64
Identities = 82/298 (27%), Positives = 137/298 (45%), Gaps = 16/298 (5%)
Query: 16 TNLKGLYLYSNSLS---GSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLE 72
+ + L S L+ +V + +L L +L + N+ + G + + ASL + L
Sbjct: 50 DKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSVS-GFKCSASLTSLDLS 108
Query: 73 QNHLTGNISEVFGIY--PNLTFLDISHNNFYGEIWSSWG-KCQQLGTLNFSMNNITGSIP 129
+N L+G ++ + + L FL++S N S G K L L+ S N+I+G+
Sbjct: 109 RNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANV 168
Query: 130 PEI---GKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSEL 186
+L L S N+I G++ + +L +L ++ N S +P LG S L
Sbjct: 169 VGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIP-FLGDCSAL 225
Query: 187 EYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGG 246
++LD+S NKLSG + ++ LN+S+NQF P L L L L+ N G
Sbjct: 226 QHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIP--PLPLKSLQYLSLAENKFTG 283
Query: 247 EIPPQIC-NLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQ 303
EIP + ++L L++S N+ G +P F L + +S N G +P T +
Sbjct: 284 EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLK 341
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 193 bits (493), Expect = 8e-53
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 12/247 (4%)
Query: 59 SLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLN 118
+ S++ N +S L L +S+++ G + S + L +L+
Sbjct: 48 RDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHINGSV-SGFKCSASLTSLD 106
Query: 119 FSMNNITGSIPP--EIGKLYQLHKLDFSLNQIVGEIPIELG-NLKSLNYLVLNGNKLSGN 175
S N+++G + +G L L+ S N + + G L SL L L+ N +SG
Sbjct: 107 LSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGA 166
Query: 176 LP---RVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLV 232
+ EL++L +S NK+SG + + + + +L++S+N F P L
Sbjct: 167 NVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIP-FLGDCS 223
Query: 233 QLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
L LD+S N L G+ I L+ LN+S N G IP + L + ++ N+
Sbjct: 224 ALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKF 281
Query: 293 LGLIPNS 299
G IP+
Sbjct: 282 TGEIPDF 288
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* Length = 768 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 5e-28
Identities = 30/129 (23%), Positives = 53/129 (41%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
+ G + + + S G N + L++ N L G IP+ +
Sbjct: 593 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEI 652
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFS 120
++ L ++L N ++G+I + G L LD+S N G I + L ++ S
Sbjct: 653 GSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLS 712
Query: 121 MNNITGSIP 129
NN++G IP
Sbjct: 713 NNNLSGPIP 721
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 286 bits (735), Expect = 1e-91
Identities = 96/292 (32%), Positives = 146/292 (50%), Gaps = 21/292 (7%)
Query: 394 YEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQ---REFLN 450
E+ A+ NF + +G GG VY+G L G +VAVK+ L E Q +F
Sbjct: 22 LRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKR-----LKEERTQGGELQFQT 76
Query: 451 EIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNV 509
E++ ++ HRN+++ GFC P LVY + GS+A L S W R +
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 510 IKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN-WTEFA 568
A L+Y+H C P I+HRD+ + N+LL E+EA V DFG+AK + ++ T
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVR 196
Query: 569 GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-------- 620
GT G++APE T K +EK DV+ +GV+ LE+I G+ D L + +
Sbjct: 197 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 256
Query: 621 -NLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
L ++D L +++ +++VALLC + SP RP M V ++L
Sbjct: 257 KEKKLEALVDVD--LQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 260 bits (666), Expect = 2e-81
Identities = 96/323 (29%), Positives = 141/323 (43%), Gaps = 32/323 (9%)
Query: 366 KRTSKENKGSCENHRGLLSILTFEGKIVYEEIIRATKNFDAEQCIGIGGQASVYRGELPS 425
+ SK + + ++ ++ AT NFD + IG G VY+G L
Sbjct: 3 SKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD 62
Query: 426 GEVVAVKKFHSLLLSEISVQ--REFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECL 483
G VA+K+ + S Q EF EI+ L+ RH ++V GFC L+Y+ +
Sbjct: 63 GAKVALKR-----RTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYM 117
Query: 484 ERGSLAEILS-NDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS 542
E G+L L +D SW R + A L Y+H I+HRD+ S N+LL
Sbjct: 118 ENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDE 174
Query: 543 EYEARVSDFGIAKFLKPGSSNW---TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALE 599
+ +++DFGI+K T GT GY+ PE ++TEK DVYSFGV+ E
Sbjct: 175 NFVPKITDFGISK-KGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFE 233
Query: 600 VIKGKHPRDFISLLSSSSSNMNL-----------SLNEILDPRLPLPSRNIQDKLISILE 648
V+ + S +NL L +I+DP L + + L +
Sbjct: 234 VLCARSAIVQ----SLPREMVNLAEWAVESHNNGQLEQIVDPN--LADKIRPESLRKFGD 287
Query: 649 VALLCLEESPESRPTMQTVCQLL 671
A+ CL S E RP+M V L
Sbjct: 288 TAVKCLALSSEDRPSMGDVLWKL 310
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 254 bits (651), Expect = 2e-79
Identities = 83/321 (25%), Positives = 128/321 (39%), Gaps = 54/321 (16%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGS--VPGEIGNLMQLTNLEI-DNNQLFGQIPR 58
G + + + L L +L +P + NL L L I N L G IP
Sbjct: 36 RTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPP 95
Query: 59 SLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLN 118
++ L L +L I+H N G I + + L TL+
Sbjct: 96 AIAKL------------------------TQLHYLYITHTNVSGAIPDFLSQIKTLVTLD 131
Query: 119 FSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSL-NYLVLNGNKLSGNLP 177
FS N ++G++PP I L L + F N+I G IP G+ L + ++ N+L+G +P
Sbjct: 132 FSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIP 191
Query: 178 RVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSEL 237
+L+ L ++DLS N L G G+ ++L+ N + ++ L+ L
Sbjct: 192 PTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGL 249
Query: 238 DLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIP 297
DL +N + G +P + L+ L LNVS NNL G IP
Sbjct: 250 DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ----------------------- 286
Query: 298 NSTGFQYDPIQALRGNRGLCG 318
Q + A N+ LCG
Sbjct: 287 -GGNLQRFDVSAYANNKCLCG 306
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 227 bits (582), Expect = 3e-69
Identities = 73/255 (28%), Positives = 114/255 (44%), Gaps = 30/255 (11%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
+N+L G IPP++ T L LY+ ++SG++P + + L L+ N L G +P S+
Sbjct: 86 INNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSI 145
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGT-LNF 119
+L PNL + N G I S+G +L T +
Sbjct: 146 SSL------------------------PNLVGITFDGNRISGAIPDSYGSFSKLFTSMTI 181
Query: 120 SMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRV 179
S N +TG IPP L L +D S N + G+ + G+ K+ + L N L+ +L +
Sbjct: 182 SRNRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK- 239
Query: 180 LGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDL 239
+G L LDL N++ G++P+ L L +H LN+S N E P L +
Sbjct: 240 VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG-NLQRFDVSAY 298
Query: 240 SHN-FLGGEIPPQIC 253
++N L G P C
Sbjct: 299 ANNKCLCG-SPLPAC 312
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 200 bits (511), Expect = 4e-59
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 5/209 (2%)
Query: 93 LDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGS--IPPEIGKLYQLHKLDFS-LNQIV 149
D + + G + + + ++ L+ S N+ IP + L L+ L +N +V
Sbjct: 31 TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLV 90
Query: 150 GEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLK 209
G IP + L L+YL + +SG +P L + L LD S N LSG++P ++ +L
Sbjct: 91 GPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPN 150
Query: 210 VHYLNLSNNQFRKEFPVELEKLVQLSE-LDLSHNFLGGEIPPQICNLESLEKLNVSHNNL 268
+ + N+ P +L + +S N L G+IPP NL +L +++S N L
Sbjct: 151 LVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNML 209
Query: 269 SGLIPSCFEGMHGLSCIDISYNELLGLIP 297
G F I ++ N L +
Sbjct: 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLG 238
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 Length = 313 | Back alignment and structure |
|---|
Score = 172 bits (439), Expect = 8e-49
Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 10/200 (5%)
Query: 106 SSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPI--ELGNLKSLN 163
SSW L T + G + + Y+++ LD S + PI L NL LN
Sbjct: 25 SSW-----LPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79
Query: 164 YLVL-NGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRK 222
+L + N L G +P + L++L YL ++ +SG+IP+ L + + L+ S N
Sbjct: 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSG 139
Query: 223 EFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESL-EKLNVSHNNLSGLIPSCFEGMHG 281
P + L L + N + G IP + L + +S N L+G IP F ++
Sbjct: 140 TLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN- 198
Query: 282 LSCIDISYNELLGLIPNSTG 301
L+ +D+S N L G G
Sbjct: 199 LAFVDLSRNMLEGDASVLFG 218
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 239 bits (613), Expect = 6e-74
Identities = 87/300 (29%), Positives = 142/300 (47%), Gaps = 37/300 (12%)
Query: 394 YEEIIRATKNFDAEQC------IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQ-- 445
+ E+ T NFD +G GG VY+G + VAVKK +++ + +
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDIT-TEELK 74
Query: 446 REFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIV 505
++F EIK + + +H N+V+ GF S LVY + GSL + LS SW +
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 506 RTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG--SSN 563
R + + AN ++++H + +HRDI S N+LL + A++SDFG+A+ + +
Sbjct: 135 RCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 564 WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNL- 622
+ GT Y+APE A ++T K D+YSFGV+ LE+I G D L
Sbjct: 192 TSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDE------HREPQLLL 244
Query: 623 -----------SLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
++ + +D ++ + + ++ VA CL E RP ++ V QLL
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKM---NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 225 bits (576), Expect = 4e-65
Identities = 62/319 (19%), Positives = 111/319 (34%), Gaps = 28/319 (8%)
Query: 4 LSGAIPPSVGNFTNLKGLYLYSNSL-SGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRN 62
++ +Y+ N+L + V + + +L LE NQL G++P + +
Sbjct: 293 DDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGS 351
Query: 63 LASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYG-EIWSSWGKCQQLGTLNFSM 121
L ++L N +T + G + L +HN + ++FS
Sbjct: 352 EIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSY 411
Query: 122 NNITG-------SIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSG 174
N I + P K + ++ S NQI L+ + L GN L+
Sbjct: 412 NEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTE 471
Query: 175 -------NLPRVLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQFRKEFPV 226
+ + L +DL NKL+ + L + ++LS N F +FP
Sbjct: 472 IPKNSLKDENENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSF-SKFPT 530
Query: 227 ELEKLVQLSEL------DLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMH 280
+ L D N E P I SL +L + N++ +
Sbjct: 531 QPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRKVNEKITP--- 587
Query: 281 GLSCIDISYNELLGLIPNS 299
+S +DI N + + +
Sbjct: 588 NISVLDIKDNPNISIDLSY 606
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 215 bits (549), Expect = 3e-61
Identities = 57/333 (17%), Positives = 115/333 (34%), Gaps = 39/333 (11%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQL-------- 52
N +L + +Y+ +P + L ++ + + N+
Sbjct: 234 YAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKD 293
Query: 53 FGQIPRSLRNLASLNRVHLEQNHL-TGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKC 111
Q + +++ N+L T + L L+ +N G++ ++G
Sbjct: 294 DWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKL-PAFGSE 352
Query: 112 QQLGTLNFSMNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIP--IELGNLKSLNYLVLN 168
+L +LN + N IT IP G Q+ L F+ N++ IP + ++ ++ + +
Sbjct: 353 IKLASLNLAYNQITE-IPANFCGFTEQVENLSFAHNKL-KYIPNIFDAKSVSVMSAIDFS 410
Query: 169 GNKLSG-------NLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFR 221
N++ L + ++LS N++S E + +NL N
Sbjct: 411 YNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT 470
Query: 222 -------KEFPVELEKLVQLSELDLSHNFLGGEIPPQI--CNLESLEKLNVSHNNLSGLI 272
K+ + L+ +DL N L + L L +++S+N+ S
Sbjct: 471 EIPKNSLKDENENFKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYLVGIDLSYNSFSK-F 528
Query: 273 PSCFEGMHGL------SCIDISYNELLGLIPNS 299
P+ L + D N L P
Sbjct: 529 PTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEG 561
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 214 bits (548), Expect = 4e-61
Identities = 51/328 (15%), Positives = 115/328 (35%), Gaps = 26/328 (7%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
+ +I S + SN+++ V + L +L + N+ +
Sbjct: 169 DPQQKSIKKSSRITLKDTQIGQLSNNIT-FVSKAVMRLTKLRQFYMGNSPFVAENICEAW 227
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
+ E + +LT +++ + ++ + ++ +N +
Sbjct: 228 ENEN-----SEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVAC 282
Query: 122 NNIT--------GSIPPEIGKLYQLHKLDFSLNQI-VGEIPIELGNLKSLNYLVLNGNKL 172
N + ++ + N + + L +K L L N+L
Sbjct: 283 NRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQL 342
Query: 173 SGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFP--VELEK 230
G GS +L L+L+ N+++ G +V L+ ++N+ K P + +
Sbjct: 343 EG-KLPAFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKL-KYIPNIFDAKS 400
Query: 231 LVQLSELDLSHNFLGG-------EIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLS 283
+ +S +D S+N +G + P ++ +N+S+N +S F LS
Sbjct: 401 VSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLS 460
Query: 284 CIDISYNELLGLIPNSTGFQYDPIQALR 311
I++ N L + NS + + +
Sbjct: 461 SINLMGNMLTEIPKNSLKDENENFKNTY 488
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 207 bits (528), Expect = 2e-58
Identities = 50/306 (16%), Positives = 111/306 (36%), Gaps = 22/306 (7%)
Query: 11 SVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQ----IPRSLRNLASL 66
S+ + + GL L SG VP IG L +L L + ++ P+ + S
Sbjct: 76 SLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSD 135
Query: 67 NRVHLEQNHLTGNISEVFG--IYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNI 124
+ + H + + +L I+ + I S + + NNI
Sbjct: 136 EQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNI 195
Query: 125 TGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLS 184
T + + +L +L + + V E E ++ Y + +L
Sbjct: 196 T-FVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEY-----AQQYKTEDLKWDNLK 249
Query: 185 ELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRK--------EFPVELEKLVQLSE 236
+L +++ +P L L ++ +N++ N+ + + ++
Sbjct: 250 DLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQI 309
Query: 237 LDLSHN-FLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGL 295
+ + +N + + ++ L L +N L G +P+ F L+ ++++YN++ +
Sbjct: 310 IYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLPA-FGSEIKLASLNLAYNQITEI 368
Query: 296 IPNSTG 301
N G
Sbjct: 369 PANFCG 374
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 157 bits (398), Expect = 8e-41
Identities = 37/297 (12%), Positives = 84/297 (28%), Gaps = 21/297 (7%)
Query: 18 LKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLT 77
LK ++ N + S G N + + Q SL + + + LE +
Sbjct: 35 LKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSNGRVTGLSLEGFGAS 94
Query: 78 GNISEVFGIYPNLTFLDISHNNFYG----EIWSSWGKCQQLGTLNFSMNNITGSIPPEIG 133
G + + G L L + + + +
Sbjct: 95 GRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDP 154
Query: 134 KLY--QLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDL 191
+ L K + + I + N ++ + + + L++L +
Sbjct: 155 REDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYM 213
Query: 192 STNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQ 251
+ N Q K ++ + L L+++++ + ++P
Sbjct: 214 GNSPFVAENICEAWEN-----ENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTF 268
Query: 252 ICNLESLEKLNVSHNNLSGL--------IPSCFEGMHGLSCIDISYNELLGL-IPNS 299
+ L ++ +NV+ N + + I I YN L + S
Sbjct: 269 LKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETS 325
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 4e-24
Identities = 23/164 (14%), Positives = 52/164 (31%), Gaps = 7/164 (4%)
Query: 144 SLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSG----S 199
L+ + + L + + L L G SG +P +G L+ELE L L ++
Sbjct: 65 ELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLF 124
Query: 200 IPETLGNLLKVHYLNLSNNQFRKEFPVELEKLV--QLSELDLSHNFLGGEIPPQICNLES 257
P+ + + ++K F + L + ++ + I
Sbjct: 125 GPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLK 184
Query: 258 LEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTG 301
++ NN++ + + L + + +
Sbjct: 185 DTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAW 227
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} Length = 636 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 1e-07
Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 3/76 (3%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N P + +L L + SN + V +I ++ L+I +N +
Sbjct: 552 NRTLREWPEGITLCPSLTQLQIGSNDIR-KVNEKI--TPNISVLDIKDNPNISIDLSYVC 608
Query: 62 NLASLNRVHLEQNHLT 77
L +
Sbjct: 609 PYIEAGMYMLFYDKTQ 624
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 216 bits (551), Expect = 7e-65
Identities = 74/307 (24%), Positives = 127/307 (41%), Gaps = 38/307 (12%)
Query: 394 YEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIK 453
E + + + G V++ +L E VAVK F + S Q E+ E+
Sbjct: 16 TENLYFQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ--DKQSWQNEY--EVY 70
Query: 454 ALTEIRHRNIVKFYGFCSHPRHS----FLVYECLERGSLAEILSNDGSIKEFSWIVRTNV 509
+L ++H NI++F G +L+ E+GSL++ L SW ++
Sbjct: 71 SLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA----NVVSWNELCHI 126
Query: 510 IKSVANALSYMHHDCF-------PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562
+++A L+Y+H D P I HRDI SKNVLL + A ++DFG+A + G S
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS 186
Query: 563 NW--TEFAGTFGYVAPELA-----YTMKVTEKCDVYSFGVLALEVIKGKHPRDFIS---- 611
GT Y+APE+ + + D+Y+ G++ E+ D
Sbjct: 187 AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYM 246
Query: 612 LLSSSSSNMNLSLNEILDP------RLPLPSRNIQDKLISIL-EVALLCLEESPESRPTM 664
L + SL ++ + R L + +++L E C + E+R +
Sbjct: 247 LPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSA 306
Query: 665 QTVCQLL 671
V + +
Sbjct: 307 GCVGERI 313
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 214 bits (546), Expect = 1e-60
Identities = 70/315 (22%), Positives = 119/315 (37%), Gaps = 16/315 (5%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
N L + ++ L L + N++S P L L L + +N+L ++
Sbjct: 34 HNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTF 93
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFS 120
+L +HL N + + F NL LD+SHN + + + L L S
Sbjct: 94 AFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLS 153
Query: 121 MNNITGSIPPEIG--KLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPR 178
N I E+ L KL+ S NQI P + L L LN +L +L
Sbjct: 154 NNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTE 213
Query: 179 VLG---SLSELEYLDLSTNKLSGSIPETLGNL--LKVHYLNLSNNQFRKEFPVELEKLVQ 233
L + + + L LS ++LS + T L + L+LS N L Q
Sbjct: 214 KLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQ 273
Query: 234 LSELDLSHNFLGGEIPPQICNLESLEKLNVSHN---------NLSGLIPSCFEGMHGLSC 284
L L +N + + L ++ LN+ + +L + F+ + L
Sbjct: 274 LEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEH 333
Query: 285 IDISYNELLGLIPNS 299
+++ N++ G+ N
Sbjct: 334 LNMEDNDIPGIKSNM 348
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 213 bits (545), Expect = 2e-60
Identities = 70/326 (21%), Positives = 111/326 (34%), Gaps = 16/326 (4%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N +S P LK L L N LS LT L + +N +
Sbjct: 59 NTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFV 118
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWS--SWGKCQQLGTLNF 119
+L + L N L+ NL L +S+N L L
Sbjct: 119 KQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLEL 178
Query: 120 SMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELG---NLKSLNYLVLNGNKLSGNL 176
S N I P + +L L + Q+ + +L S+ L L+ ++LS
Sbjct: 179 SSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTS 238
Query: 177 PRVLGSL--SELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQL 234
L + L LDLS N L+ ++ L ++ Y L N + F L L +
Sbjct: 239 NTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNV 298
Query: 235 SELDLSHNFLGG--------EIPPQIC-NLESLEKLNVSHNNLSGLIPSCFEGMHGLSCI 285
L+L +F +I L+ LE LN+ N++ G+ + F G+ L +
Sbjct: 299 RYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYL 358
Query: 286 DISYNELLGLIPNSTGFQYDPIQALR 311
+S + + F L
Sbjct: 359 SLSNSFTSLRTLTNETFVSLAHSPLH 384
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 211 bits (538), Expect = 2e-59
Identities = 70/318 (22%), Positives = 118/318 (37%), Gaps = 16/318 (5%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNN--QLFGQIPRS 59
L S L+ L + N + G L+ L L + N+ L +
Sbjct: 315 ASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNET 374
Query: 60 LRNLA--SLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEI-WSSWGKCQQLGT 116
+LA L+ ++L +N ++ S+ F +L LD+ N E+ W + +
Sbjct: 375 FVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFE 434
Query: 117 LNFSMNNITGSIPPEIGKLYQLHKLDFSLNQI--VGEIPIELGNLKSLNYLVLNGNKLSG 174
+ S N + L +L + V P L++L L L+ N ++
Sbjct: 435 IYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIAN 494
Query: 175 NLPRVLGSLSELEYLDLSTNKLS--------GSIPETLGNLLKVHYLNLSNNQFRKEFPV 226
+L L +LE LDL N L+ G L L +H LNL +N F +
Sbjct: 495 INDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVE 554
Query: 227 ELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFE-GMHGLSCI 285
+ L +L +DL N L N SL+ LN+ N ++ + F L+ +
Sbjct: 555 VFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTEL 614
Query: 286 DISYNELLGLIPNSTGFQ 303
D+ +N + F
Sbjct: 615 DMRFNPFDCTCESIAWFV 632
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 204 bits (522), Expect = 3e-57
Identities = 79/323 (24%), Positives = 128/323 (39%), Gaps = 21/323 (6%)
Query: 2 NHLSGAIPPSVGNF--TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRS 59
N + + F ++LK L L SN + PG + +L L ++N QL +
Sbjct: 155 NKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEK 214
Query: 60 LR---NLASLNRVHLEQNHLTGNISEVFG--IYPNLTFLDISHNNFYGEIWSSWGKCQQL 114
L S+ + L + L+ + F + NLT LD+S+NN S+ QL
Sbjct: 215 LCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQL 274
Query: 115 GTLNFSMNNITGSIPPEIGKLYQLHKLD---------FSLNQIVGEIPIELGNLKSLNYL 165
NNI + L+ + L+ SL + LK L +L
Sbjct: 275 EYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHL 334
Query: 166 VLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGS--IPETLGNL--LKVHYLNLSNNQFR 221
+ N + G + L L+YL LS + S ET +L +H LNL+ N+
Sbjct: 335 NMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKIS 394
Query: 222 KEFPVELEKLVQLSELDLSHNFLGGEIPPQ-ICNLESLEKLNVSHNNLSGLIPSCFEGMH 280
K L L LDL N +G E+ Q LE++ ++ +S+N L + F +
Sbjct: 395 KIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVP 454
Query: 281 GLSCIDISYNELLGLIPNSTGFQ 303
L + + L + + + FQ
Sbjct: 455 SLQRLMLRRVALKNVDSSPSPFQ 477
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 204 bits (522), Expect = 4e-57
Identities = 73/322 (22%), Positives = 125/322 (38%), Gaps = 11/322 (3%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
L+ +P + TN+ L L N L QLT+L++ N + P +
Sbjct: 14 LKLT-QVPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQ 70
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
L L ++L+ N L+ + F NLT L + N+ + + K + L TL+ S
Sbjct: 71 KLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSH 130
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLK--SLNYLVLNGNKLSGNLPRV 179
N ++ + +L L +L S N+I EL SL L L+ N++ P
Sbjct: 131 NGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGC 190
Query: 180 LGSLSELEYLDLSTNKLSGSIPETLG---NLLKVHYLNLSNNQFRKEFPVELE--KLVQL 234
++ L L L+ +L S+ E L + L+LSN+Q K L
Sbjct: 191 FHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNL 250
Query: 235 SELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLG 294
+ LDLS+N L L LE + +NN+ L G+ + +++ +
Sbjct: 251 TMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRS-FTK 309
Query: 295 LIPNSTGFQYDPIQALRGNRGL 316
+ + + + L
Sbjct: 310 QSISLASLPKIDDFSFQWLKCL 331
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 181 bits (461), Expect = 7e-49
Identities = 65/266 (24%), Positives = 105/266 (39%), Gaps = 10/266 (3%)
Query: 41 QLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNF 100
+ + +L Q+P L ++ ++L N L + F Y LT LD+ N
Sbjct: 5 SHEVADCSHLKLT-QVPDDL--PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTI 61
Query: 101 YGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLK 160
K L LN N ++ L +L N I K
Sbjct: 62 SKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQK 121
Query: 161 SLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLG--NLLKVHYLNLSNN 218
+L L L+ N LS L L+ L LS NK+ E L + L LS+N
Sbjct: 122 NLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSN 181
Query: 219 QFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQIC---NLESLEKLNVSHNNLSGLIPSC 275
Q ++ P + +L L L++ LG + ++C S+ L++S++ LS +
Sbjct: 182 QIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT 241
Query: 276 FEGMHG--LSCIDISYNELLGLIPNS 299
F G+ L+ +D+SYN L + +S
Sbjct: 242 FLGLKWTNLTMLDLSYNNLNVVGNDS 267
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 1e-42
Identities = 57/287 (19%), Positives = 93/287 (32%), Gaps = 16/287 (5%)
Query: 2 NHLSGAIPPSVG----NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIP 57
+ S + + L L L N +S L L L++ N++ ++
Sbjct: 363 SFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELT 422
Query: 58 RS-LRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYG--EIWSSWGKCQQL 114
R L ++ ++L N F + P+L L + S + + L
Sbjct: 423 GQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNL 482
Query: 115 GTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQI--------VGEIPIELGNLKSLNYLV 166
L+ S NNI + L +L LD N + G L L L+ L
Sbjct: 483 TILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILN 542
Query: 167 LNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPV 226
L N V L EL+ +DL N L+ N + + LNL N
Sbjct: 543 LESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKK 602
Query: 227 ELEK-LVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLI 272
L+ELD+ N + + + + + LS
Sbjct: 603 VFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPELSSHY 649
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 3e-34
Identities = 45/193 (23%), Positives = 77/193 (39%), Gaps = 6/193 (3%)
Query: 110 KCQ-QLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLN 168
KC + S +T +P ++ + L+ + NQ+ L L +
Sbjct: 1 KCTVSHEVADCSHLKLT-QVPDDLPT--NITVLNLTHNQLRRLPAANFTRYSQLTSLDVG 57
Query: 169 GNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVEL 228
N +S P + L L+ L+L N+LS +T + L+L +N +K
Sbjct: 58 FNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPF 117
Query: 229 EKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHG--LSCID 286
K L LDLSHN L LE+L++L +S+N + L + L ++
Sbjct: 118 VKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLE 177
Query: 287 ISYNELLGLIPNS 299
+S N++ P
Sbjct: 178 LSSNQIKEFSPGC 190
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* Length = 680 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 3e-29
Identities = 41/223 (18%), Positives = 71/223 (31%), Gaps = 16/223 (7%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSG--SVPGEIGNLMQLTNLEIDNNQLFGQIPRS 59
N S +L+ L L +L S P L LT L++ NN +
Sbjct: 440 NKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDM 499
Query: 60 LRNLASLNRVHLEQNHLT--------GNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKC 111
L L L + L+ N+L G +L L++ N F +
Sbjct: 500 LEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDL 559
Query: 112 QQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELG-NLKSLNYLVLNGN 170
+L ++ +NN+ L L+ N I G ++L L + N
Sbjct: 560 FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFN 619
Query: 171 KLSGNLPRVLG-----SLSELEYLDLSTNKLSGSIPETLGNLL 208
+ + + +LS++ L + P G +
Sbjct: 620 PFDCTCESIAWFVNWINETHTNIPELSSHYLCNTPPHYHGFPV 662
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 199 bits (509), Expect = 6e-59
Identities = 82/262 (31%), Positives = 128/262 (48%), Gaps = 13/262 (4%)
Query: 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGF 469
IG G +V+R E G VAVK V EFL E+ + +RH NIV F G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVN-EFLREVAIMKRLRHPNIVLFMGA 102
Query: 470 CSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIV 529
+ P + +V E L RGSL +L G+ ++ R ++ VA ++Y+H+ PPIV
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIV 161
Query: 530 HRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCD 589
HR++ S N+L+ +Y +V DFG+++ + AGT ++APE+ EK D
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSD 221
Query: 590 VYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEV 649
VYSFGV+ E+ + P ++ ++ RL +P N+ ++ +I+E
Sbjct: 222 VYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK------RLEIPR-NLNPQVAAIIE- 273
Query: 650 ALLCLEESPESRPTMQTVCQLL 671
C P RP+ T+ LL
Sbjct: 274 --GCWTNEPWKRPSFATIMDLL 293
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 199 bits (509), Expect = 7e-59
Identities = 68/271 (25%), Positives = 126/271 (46%), Gaps = 31/271 (11%)
Query: 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
E+ +G G V + + + VA+K+ S S ++ F+ E++ L+ + H NIVK
Sbjct: 13 EEVVGRGAFGVVCKAKW-RAKDVAIKQIES-----ESERKAFIVELRQLSRVNHPNIVKL 66
Query: 467 YGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFP 526
YG C +P LV E E GSL +L + ++ + + ++Y+H
Sbjct: 67 YGACLNPV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124
Query: 527 PIVHRDISSKNVLLSSEYE-ARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVT 585
++HRD+ N+LL + ++ DFG A ++ ++ T G+ ++APE+ +
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ---THMTNNKGSAAWMAPEVFEGSNYS 181
Query: 586 EKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEIL-----DPRLPLPSRNIQ 640
EKCDV+S+G++ EVI + P + I+ R PL N+
Sbjct: 182 EKCDVFSWGIILWEVITRRKP----------FDEIGGPAFRIMWAVHNGTRPPLIK-NLP 230
Query: 641 DKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ S++ C + P RP+M+ + +++
Sbjct: 231 KPIESLMT---RCWSKDPSQRPSMEEIVKIM 258
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 207 bits (528), Expect = 4e-57
Identities = 62/331 (18%), Positives = 109/331 (32%), Gaps = 39/331 (11%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQL--------- 52
S N +L + LY+ +P + +L +L +L I N+
Sbjct: 477 AKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKAD 536
Query: 53 FGQIPRSLRNLASLNRVHLEQNHLTG-NISEVFGIYPNLTFLDISHNNFYGEIWSSWGKC 111
+ ++ + ++ N+L S L LD HN ++G
Sbjct: 537 WTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKV--RHLEAFGTN 594
Query: 112 QQLGTLNFSMNNITGSIPPEIGK-LYQLHKLDFSLNQIVGEIP--IELGNLKSLNYLVLN 168
+L L N I IP + Q+ L FS N++ IP ++ + + +
Sbjct: 595 VKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKL-KYIPNIFNAKSVYVMGSVDFS 652
Query: 169 GNKLSGNLPRVLGSLSE-----LEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFR-- 221
NK+ + S+ + + LS N++ E + + LSNN
Sbjct: 653 YNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSI 712
Query: 222 -----KEFPVELEKLVQLSELDLSHNFLGGEIPPQI--CNLESLEKLNVSHNNLSGLIPS 274
K + L+ +DL N L + L L ++VS+N S P+
Sbjct: 713 PENSLKPKDGNYKNTYLLTTIDLRFNKL-TSLSDDFRATTLPYLSNMDVSYNCFSS-FPT 770
Query: 275 CFEGMHGLSCIDISY------NELLGLIPNS 299
L I + N +L P
Sbjct: 771 QPLNSSQLKAFGIRHQRDAEGNRILRQWPTG 801
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 203 bits (517), Expect = 1e-55
Identities = 54/331 (16%), Positives = 117/331 (35%), Gaps = 32/331 (9%)
Query: 8 IPPSVGNFTNLKGLYLYSNSLSG-SVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
+ ++ Y+ N+L + +++L L+ +N++ + + L
Sbjct: 540 LADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKV--RHLEAFGTNVKL 597
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYG-EIWSSWGKCQQLGTLNFSMNNIT 125
+ L+ N + + + L SHN + +G+++FS N I
Sbjct: 598 TDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIG 657
Query: 126 GSIPPEIG------KLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLS------ 173
S I K + S N+I ++ ++L+ N ++
Sbjct: 658 -SEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENS 716
Query: 174 -GNLPRVLGSLSELEYLDLSTNKLSGSIPETL--GNLLKVHYLNLSNNQFRKEFPVELEK 230
+ L +DL NKL+ S+ + L + +++S N F FP +
Sbjct: 717 LKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCF-SSFPTQPLN 774
Query: 231 LVQLSELDLSH------NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSC 284
QL + H N + + P I SL +L + N++ + + L
Sbjct: 775 SSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIRKVDE---KLTPQLYI 831
Query: 285 IDISYNELLGL-IPNSTGFQYDPIQALRGNR 314
+DI+ N + + + + + + L ++
Sbjct: 832 LDIADNPNISIDVTSVCPYIEAGMYVLLYDK 862
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 180 bits (457), Expect = 8e-48
Identities = 52/317 (16%), Positives = 104/317 (32%), Gaps = 27/317 (8%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
+ + N + GL L G VP IG L +L L +
Sbjct: 309 DMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGD 368
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYP-NLTFLDISHNNF-----YGEIWSSWGKCQQLG 115
+ + ++ + + ++F Y L D+ + I +
Sbjct: 369 EELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDT 428
Query: 116 TLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175
+ N IT I I +L +L + F+ + + + +Y K N
Sbjct: 429 QIGNLTNRIT-FISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDY-----AKQYEN 482
Query: 176 LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFR---------KEFPV 226
+L +L ++L +P+ L +L ++ LN++ N+
Sbjct: 483 EELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLAD 542
Query: 227 ELEKLVQLSELDLSHNFLGGEIPP--QICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSC 284
+ + ++ + +N L E P + + L L+ HN + L F L+
Sbjct: 543 DEDTGPKIQIFYMGYNNL-EEFPASASLQKMVKLGLLDCVHNKVRHL--EAFGTNVKLTD 599
Query: 285 IDISYNELLGLIPNSTG 301
+ + YN++ IP
Sbjct: 600 LKLDYNQIEE-IPEDFC 615
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 176 bits (448), Expect = 1e-46
Identities = 47/297 (15%), Positives = 96/297 (32%), Gaps = 33/297 (11%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLM-QLTNLEIDNNQLFGQIPR-- 58
N + + G L L L N + +P + Q+ L +N+L IP
Sbjct: 583 NKVR--HLEAFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKL-KYIPNIF 638
Query: 59 SLRNLASLNRVHLEQNHLTGNISEVFGIYP-----NLTFLDISHNNFYGEIWSSWGKCQQ 113
+ +++ + V N + + N + + +S+N +
Sbjct: 639 NAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSP 698
Query: 114 LGTLNFSMNNIT-------GSIPPEIGKLYQLHKLDFSLNQIVGEIP--IELGNLKSLNY 164
+ T+ S N +T Y L +D N++ + L L+
Sbjct: 699 ISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSN 757
Query: 165 LVLNGNKLSGNLPRVLGSLSELEYLDL------STNKLSGSIPETLGNLLKVHYLNLSNN 218
+ ++ N S P + S+L+ + N++ P + + L + +N
Sbjct: 758 MDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSN 816
Query: 219 QFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSC 275
R + +L QL LD++ N +C + ++ I C
Sbjct: 817 DIR-KVDEKL--TPQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQ-DIRGC 869
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 5e-29
Identities = 29/225 (12%), Positives = 74/225 (32%), Gaps = 14/225 (6%)
Query: 89 NLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQI 148
+T L ++ G + + G+ +L L+F ++ T S + + ++I
Sbjct: 324 RVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRI 383
Query: 149 VGEIP-IELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSG------SIP 201
+ L + LN L + ++ N + + + + L ++ I
Sbjct: 384 RMHYKKMFLDYDQRLNLSDLLQDAINRNPE--MKPIKKDSRISLKDTQIGNLTNRITFIS 441
Query: 202 ETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKL 261
+ + L K+ + +N+ F V + + + NL+ L +
Sbjct: 442 KAIQRLTKLQIIYFANSPFT-----YDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDV 496
Query: 262 NVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDP 306
+ + +P + L ++I+ N + +
Sbjct: 497 ELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLA 541
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 94.2 bits (234), Expect = 4e-20
Identities = 27/208 (12%), Positives = 63/208 (30%), Gaps = 48/208 (23%)
Query: 140 KLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGS 199
+ L+ + ++L N + L L G G +P +G L+EL+ L T+ + S
Sbjct: 303 NFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVS 362
Query: 200 IPETLGNLLKVHYLNLSNNQFRKEF-PVELEKLVQLSELDLSHNFLGG------------ 246
L ++ R + + L+ +L+ DL + +
Sbjct: 363 GRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDSR 422
Query: 247 ----------------EIPPQICNLESLEKLNVSHNNLSGL------------------- 271
I I L L+ + +++ +
Sbjct: 423 ISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYEN 482
Query: 272 IPSCFEGMHGLSCIDISYNELLGLIPNS 299
+ + L+ +++ + +P+
Sbjct: 483 EELSWSNLKDLTDVELYNCPNMTQLPDF 510
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} Length = 876 | Back alignment and structure |
|---|
Score = 66.1 bits (161), Expect = 2e-11
Identities = 21/235 (8%), Positives = 67/235 (28%), Gaps = 16/235 (6%)
Query: 89 NLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQI 148
L + +++ E + + + + + +P YQ+
Sbjct: 172 ELKGMKVTYKEDSKEHQNPDNANDKYMDIGVATCDSAVWLPAGT---YQVVAYTTYSQSG 228
Query: 149 VGEIPIELGNLKSLNYLVLNG------------NKLSGNLPRVLGSLSELEYLDLSTNKL 196
+ +E +++ ++ V++ + + + + E LD +
Sbjct: 229 IKRSELETQSVRGESFTVIDNKLTKDANVPIQLKETAEYIKDYKALKAIWEALDGKNWRY 288
Query: 197 SGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLE 256
+ N + + + V+L+ +++ L L+ G +P I L
Sbjct: 289 YSGTINNTIHS-LNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLT 347
Query: 257 SLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALR 311
L+ L+ ++ + + + + + +
Sbjct: 348 ELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 202 bits (516), Expect = 5e-57
Identities = 63/304 (20%), Positives = 111/304 (36%), Gaps = 13/304 (4%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
+++ I TN+ L S ++ +LE+ N + L
Sbjct: 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD--FSYNFGWQHLELVNCKFGQFPTLKL 324
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHN--NFYGEIWSSWGKCQQLGTLN 118
++L L G + P+L FLD+S N +F G S L L+
Sbjct: 325 KSLKRLTF-----TSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLD 379
Query: 119 FSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYLVLNGNKLSGNLP 177
S N + + L QL LDF + + +L++L YL ++
Sbjct: 380 LSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFN 438
Query: 178 RVLGSLSELEYLDLSTNKLSGSI-PETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSE 236
+ LS LE L ++ N + P+ L + +L+LS Q + P L L
Sbjct: 439 GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498
Query: 237 LDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHG-LSCIDISYNELLGL 295
L++SHN L SL+ L+ S N++ + L+ ++++ N+
Sbjct: 499 LNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 558
Query: 296 IPNS 299
+
Sbjct: 559 CEHQ 562
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 174 bits (443), Expect = 6e-47
Identities = 66/338 (19%), Positives = 112/338 (33%), Gaps = 39/338 (11%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
+ + + ++L L L N + G L L L L +
Sbjct: 62 CEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIG 121
Query: 62 NLASLNRVHLEQNHLTG-NISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLG----T 116
+L +L +++ N + + E F NL LD+S N + Q+ +
Sbjct: 122 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLS 181
Query: 117 LNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYLVLNGNKLSG- 174
L+ S+N + I P K +LHKL N + + L L L +
Sbjct: 182 LDLSLNPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNE 240
Query: 175 -NLPRV-LGSLSELEYLDLSTNKLS------GSIPETLGNLLKVHYLNLSNNQFRKEFPV 226
NL + +L L L + +L+ I + L V +L + +
Sbjct: 241 GNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD- 299
Query: 227 ELEKLVQLSELDLSHNFLG-------------------GEIPPQICNLESLEKLNVSHNN 267
L+L + G G +L SLE L++S N
Sbjct: 300 -FSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNG 358
Query: 268 LS--GLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQ 303
LS G G L +D+S+N ++ + N G +
Sbjct: 359 LSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLE 396
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 173 bits (440), Expect = 2e-46
Identities = 58/308 (18%), Positives = 106/308 (34%), Gaps = 20/308 (6%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
IP ++ + K L L N L + +L L++ ++ + ++L+ L
Sbjct: 21 KIPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHL 78
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITG 126
+ + L N + F +L L N G + L LN + N I
Sbjct: 79 STLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS 138
Query: 127 -SIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNY----LVLNGNKLSGNLPRVLG 181
+P L L LD S N+I +L L + L L+ N ++ P
Sbjct: 139 FKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK 198
Query: 182 SLSELEYLDLSTNKLSGSIPET-LGNLLKVHYLNLSNNQFRKEFPVE------LEKLVQL 234
+ L L L N S ++ +T + L + L +FR E +E LE L L
Sbjct: 199 EIR-LHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNL 257
Query: 235 SELDLSHNFL---GGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNE 291
+ + +L +I L ++ ++ + + F G +++ +
Sbjct: 258 TIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD--FSYNFGWQHLELVNCK 315
Query: 292 LLGLIPNS 299
Sbjct: 316 FGQFPTLK 323
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 172 bits (438), Expect = 3e-46
Identities = 64/336 (19%), Positives = 103/336 (30%), Gaps = 41/336 (12%)
Query: 2 NHL-SGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTN----LEIDNNQLFGQI 56
N + S +P N TNL+ L L SN + ++ L Q+ L++ N +
Sbjct: 134 NLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQ 193
Query: 57 PRSLRNLASLNRVHLEQNHLTGNI-SEVFGIYPNLTFLDISHNNFYGEI---WSSWGKCQ 112
P + + + L+++ L N + N+ L + F E +
Sbjct: 194 PGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALE 252
Query: 113 QLGTLNFSMNNIT------GSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLV 166
L L + I L + I +L
Sbjct: 253 GLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKD--FSYNFGWQHLE 310
Query: 167 LNGNKLS-------------------GNLPRVLGSLSELEYLDLSTNKLS--GSIPETLG 205
L K G L LE+LDLS N LS G ++
Sbjct: 311 LVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDF 370
Query: 206 NLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQI-CNLESLEKLNVS 264
+ YL+LS N L QL LD H+ L + +L +L L++S
Sbjct: 371 GTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDIS 429
Query: 265 HNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNST 300
H + F G+ L + ++ N
Sbjct: 430 HTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 465
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 170 bits (434), Expect = 1e-45
Identities = 67/309 (21%), Positives = 108/309 (34%), Gaps = 39/309 (12%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
+ + L L + ++ +L +L G S
Sbjct: 292 VTIER--VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRL-----TFTSNKGGNAFSEV 344
Query: 62 NLASLNRVHLEQNHLT--GNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNF 119
+L SL + L +N L+ G S+ +L +LD+S N + S++ +QL L+F
Sbjct: 345 DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDF 403
Query: 120 SMNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNL-P 177
+N+ + L L LD S L SL L + GN N P
Sbjct: 404 QHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLP 463
Query: 178 RVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSEL 237
+ L L +LDLS +L P +L + LN+S+N F + L L L
Sbjct: 464 DIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 523
Query: 238 DLSHNFLGGEIPPQICNLE-SLEKLNVSHNNLS--------------------------G 270
D S N + ++ + SL LN++ N+ +
Sbjct: 524 DYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMEC 583
Query: 271 LIPSCFEGM 279
PS +GM
Sbjct: 584 ATPSDKQGM 592
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 147 bits (374), Expect = 1e-37
Identities = 47/221 (21%), Positives = 82/221 (37%), Gaps = 16/221 (7%)
Query: 88 PNLTFLDISHNNFY---GEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFS 144
PN+T+ NFY + S L+ S N + +L LD S
Sbjct: 8 PNITY-QCMELNFYKIPDNLPFS------TKNLDLSFNPLRHLGSYSFFSFPELQVLDLS 60
Query: 145 LNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETL 204
+I +L L+ L+L GN + LS L+ L L+ +
Sbjct: 61 RCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPI 120
Query: 205 GNLLKVHYLNLSNNQFRK-EFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLE---- 259
G+L + LN+++N + + P L L LDLS N + + L +
Sbjct: 121 GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL 180
Query: 260 KLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNST 300
L++S N ++ + P F+ + L + + N + +
Sbjct: 181 SLDLSLNPMNFIQPGAFKEIR-LHKLTLRNNFDSLNVMKTC 220
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 8e-29
Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 3/153 (1%)
Query: 151 EIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKV 210
+IP L S L L+ N L S EL+ LDLS ++ +L +
Sbjct: 21 KIPDNLPF--STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHL 78
Query: 211 HYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSG 270
L L+ N + L L +L L I +L++L++LNV+HN +
Sbjct: 79 STLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS 138
Query: 271 L-IPSCFEGMHGLSCIDISYNELLGLIPNSTGF 302
+P F + L +D+S N++ +
Sbjct: 139 FKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV 171
|
| >3fxi_A TLR4, htoll, TOLL-like receptor 4; leucine rich repeat, glycoprotein, immune response, inflamma response, innate immunity, membrane, receptor; HET: PA1 KDO GMH FTT DAO MYR NAG GCS; 3.10A {Homo sapiens} Length = 605 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 7e-19
Identities = 25/135 (18%), Positives = 44/135 (32%), Gaps = 4/135 (2%)
Query: 1 MNHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRS 59
N P + NL L L L P +L L L + +N F
Sbjct: 454 GNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFP 513
Query: 60 LRNLASLNRVHLEQNHLTGNISEVFG-IYPNLTFLDISHNNFYGEIWSSW--GKCQQLGT 116
+ L SL + NH+ + + +L FL+++ N+F +
Sbjct: 514 YKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQ 573
Query: 117 LNFSMNNITGSIPPE 131
L + + + P +
Sbjct: 574 LLVEVERMECATPSD 588
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 190 bits (485), Expect = 6e-56
Identities = 76/276 (27%), Positives = 119/276 (43%), Gaps = 30/276 (10%)
Query: 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEIS-VQREFLNEIKALTEIRHRNIVK 465
E+ IGIGG VYR G+ VAVK +IS E K ++H NI+
Sbjct: 12 EEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 466 FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF 525
G C + LV E G L +LS K + N +A ++Y+H +
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDEAI 126
Query: 526 PPIVHRDISSKNVLLSSEYEAR--------VSDFGIAKFLKPGSSNWTEFAGTFGYVAPE 577
PI+HRD+ S N+L+ + E ++DFG+A+ + AG + ++APE
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK--MSAAGAYAWMAPE 184
Query: 578 LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS--NMNLSLNEILDPRLPLP 635
+ ++ DV+S+GVL E++ G+ P I L+ + L LP+P
Sbjct: 185 VIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKL--------ALPIP 236
Query: 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
S + ++E C P SRP+ + L
Sbjct: 237 S-TCPEPFAKLME---DCWNPDPHSRPSFTNILDQL 268
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 187 bits (477), Expect = 1e-54
Identities = 79/277 (28%), Positives = 123/277 (44%), Gaps = 28/277 (10%)
Query: 407 EQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQ----REFLNEIKALTEIRHR 461
E+ IG GG V++G L VVA+K + +EF E+ ++ + H
Sbjct: 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHP 83
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH 521
NIVK YG +P +V E + G L L + W V+ ++ +A + YM
Sbjct: 84 NIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQ 139
Query: 522 HDCFPPIVHRDISSKNVLLSSEYE-----ARVSDFGIAKFLKPGSSNWTEFAGTFGYVAP 576
+ PPIVHRD+ S N+ L S E A+V+DFG+++ + G F ++AP
Sbjct: 140 N-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSV---SGLLGNFQWMAP 195
Query: 577 EL--AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634
E A TEK D YSF ++ ++ G+ P D S NM R +
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL----RPTI 251
Query: 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
P + +L +++E LC P+ RP + + L
Sbjct: 252 PE-DCPPRLRNVIE---LCWSGDPKKRPHFSYIVKEL 284
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 177 bits (450), Expect = 7e-51
Identities = 51/267 (19%), Positives = 95/267 (35%), Gaps = 24/267 (8%)
Query: 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGF 469
+ +++G G + VK S R+F E L H N++ G
Sbjct: 18 LNENHSGELWKGRW-QGNDIVVKVLKVRDWST-RKSRDFNEECPRLRIFSHPNVLPVLGA 75
Query: 470 CSHP--RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPP 527
C P H L+ + GSL +L + +A ++++H P
Sbjct: 76 CQSPPAPHPTLITHWMPYGSLYNVLHEGTNFV-VDQSQAVKFALDMARGMAFLHT-LEPL 133
Query: 528 IVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL---AYTMKV 584
I ++S++V++ + AR+S + + +VAPE
Sbjct: 134 IPRHALNSRSVMIDEDMTARISMADVKFSFQSPGR-----MYAPAWVAPEALQKKPEDTN 188
Query: 585 TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLI 644
D++SF VL E++ + P +S + L R +P I +
Sbjct: 189 RRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGL------RPTIPP-GISPHVS 241
Query: 645 SILEVALLCLEESPESRPTMQTVCQLL 671
+++ +C+ E P RP + +L
Sbjct: 242 KLMK---ICMNEDPAKRPKFDMIVPIL 265
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 185 bits (472), Expect = 8e-51
Identities = 65/331 (19%), Positives = 104/331 (31%), Gaps = 33/331 (9%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N L ++ LK L+ +S + N L +L + +N +
Sbjct: 91 NPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGF 150
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDIS-HNNFYGEIWSSWGKCQQLGTLNFS 120
L + + N + E T L ++ + N I +LNF
Sbjct: 151 PTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFG 210
Query: 121 MNNITGSIPPEIG----------------------------KLYQLHKLDFSLNQIVGEI 152
I + + ++ +
Sbjct: 211 GTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNIS 270
Query: 153 PIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHY 212
L L L LS LP L LS L+ L LS NK + N + +
Sbjct: 271 SNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTH 329
Query: 213 LNLSNNQFR-KEFPVELEKLVQLSELDLSHNFLG--GEIPPQICNLESLEKLNVSHNNLS 269
L++ N R + LE L L ELDLSH+ + Q+ NL L+ LN+S+N
Sbjct: 330 LSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPL 389
Query: 270 GLIPSCFEGMHGLSCIDISYNELLGLIPNST 300
L F+ L +D+++ L S
Sbjct: 390 SLKTEAFKECPQLELLDLAFTRLKVKDAQSP 420
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 184 bits (470), Expect = 1e-50
Identities = 61/309 (19%), Positives = 103/309 (33%), Gaps = 9/309 (2%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
+ + + L L L +N L + L +L + L
Sbjct: 67 CQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLH 126
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLG--TLNF 119
N +L ++L NH++ L LD +N + QQ +LN
Sbjct: 127 NQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNL 186
Query: 120 SMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGN--LKSLNYLVLNGNKLSGNLP 177
+ N+I I P L+F Q + I L N ++SL P
Sbjct: 187 NGNDIA-GIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISP 245
Query: 178 RVLGSLSE--LEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLS 235
V L E +E ++L + T + L+L+ E P L L L
Sbjct: 246 AVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHL-SELPSGLVGLSTLK 304
Query: 236 ELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPS-CFEGMHGLSCIDISYNELLG 294
+L LS N N SL L++ N + + C E + L +D+S++++
Sbjct: 305 KLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIET 364
Query: 295 LIPNSTGFQ 303
+ +
Sbjct: 365 SDCCNLQLR 373
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 184 bits (468), Expect = 3e-50
Identities = 64/298 (21%), Positives = 115/298 (38%), Gaps = 9/298 (3%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
++ + F+ L+ L L + LS +P + L L L + N+ S
Sbjct: 264 HYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISAS 322
Query: 62 NLASLNRVHLEQNHLTGNI-SEVFGIYPNLTFLDISHNNFY--GEIWSSWGKCQQLGTLN 118
N SL + ++ N + + NL LD+SH++ L +LN
Sbjct: 323 NFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLN 382
Query: 119 FSMNNITGSIPPEIGKLYQLHKLDFSLNQIVG-EIPIELGNLKSLNYLVLNGNKLSGNLP 177
S N + QL LD + ++ + NL L L L+ + L +
Sbjct: 383 LSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSE 442
Query: 178 RVLGSLSELEYLDLSTNKLSGSI---PETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQL 234
++ L L++L+L N +L L ++ L LS L +
Sbjct: 443 QLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMM 502
Query: 235 SELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
+ +DLSHN L + +L+ + LN++ N++S ++PS + I++ N L
Sbjct: 503 NHVDLSHNRLTSSSIEALSHLKGIY-LNLASNHISIILPSLLPILSQQRTINLRQNPL 559
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 183 bits (466), Expect = 6e-50
Identities = 62/309 (20%), Positives = 105/309 (33%), Gaps = 12/309 (3%)
Query: 2 NHLSGAIPPSVGN--FTNLKGLYLYSNSLSGSVPGEIGNL--MQLTNLEIDNNQLFGQIP 57
I + N +L P L M + ++ + + F
Sbjct: 212 TQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISS 271
Query: 58 RSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTL 117
+ + L + L HL+ + L L +S N F S L L
Sbjct: 272 NTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHL 330
Query: 118 NFSMNNITGSIPPE-IGKLYQLHKLDFSLNQI--VGEIPIELGNLKSLNYLVLNGNKLSG 174
+ N + + L L +LD S + I ++L NL L L L+ N+
Sbjct: 331 SIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLS 390
Query: 175 NLPRVLGSLSELEYLDLSTNKLSGSIPET-LGNLLKVHYLNLSNNQFRKEFPVELEKLVQ 233
+LE LDL+ +L ++ NL + LNLS++ + L
Sbjct: 391 LKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPA 450
Query: 234 LSELDLSHNFLGGEI---PPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYN 290
L L+L N + L LE L +S +LS + F + ++ +D+S+N
Sbjct: 451 LQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHN 510
Query: 291 ELLGLIPNS 299
L +
Sbjct: 511 RLTSSSIEA 519
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 180 bits (459), Expect = 4e-49
Identities = 55/306 (17%), Positives = 92/306 (30%), Gaps = 8/306 (2%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
N L + NL L L + + +L L + N L +L
Sbjct: 42 FNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETAL 101
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFS 120
+L + Q ++ L L + N+ ++L L+F
Sbjct: 102 SGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQ 161
Query: 121 MNNITGSIPPEIGKLYQLH--KLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPR 178
N I ++ L Q L+ + N I I + L G + + +
Sbjct: 162 NNAIHYLSKEDMSSLQQATNLSLNLNGNDI-AGIEPGAFDSAVFQSLNFGGTQNLLVIFK 220
Query: 179 VLG--SLSELEYLDLSTNKLSGSIPETLGNL--LKVHYLNLSNNQFRKEFPVELEKLVQL 234
L ++ L P L + V +NL + F L
Sbjct: 221 GLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGL 280
Query: 235 SELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLG 294
ELDL+ L E+P + L +L+KL +S N L L+ + I N
Sbjct: 281 QELDLTATHL-SELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRL 339
Query: 295 LIPNST 300
+
Sbjct: 340 ELGTGC 345
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 177 bits (452), Expect = 4e-48
Identities = 67/310 (21%), Positives = 113/310 (36%), Gaps = 10/310 (3%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLS-GSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
N + + + L L N + + +L Q I + L
Sbjct: 163 NAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGL 222
Query: 61 RN--LASLNRVHLEQNHLTGNISEVFGIYP--NLTFLDISHNNFYGEIWSSWGKCQQLGT 116
+N + SL E VF ++ +++ + F+ +++ L
Sbjct: 223 KNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQE 282
Query: 117 LNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNL 176
L+ + +++ +P + L L KL S N+ I N SL +L + GN L
Sbjct: 283 LDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLEL 341
Query: 177 -PRVLGSLSELEYLDLSTNKL--SGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQ 233
L +L L LDLS + + S L NL + LNLS N+ ++ Q
Sbjct: 342 GTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQ 401
Query: 234 LSELDLSHNFLGGEIPP-QICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
L LDL+ L + NL L+ LN+SH+ L F+G+ L +++ N
Sbjct: 402 LELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHF 461
Query: 293 LGLIPNSTGF 302
T
Sbjct: 462 PKGNIQKTNS 471
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 169 bits (429), Expect = 6e-45
Identities = 56/304 (18%), Positives = 110/304 (36%), Gaps = 11/304 (3%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
L+ IP ++ + + L N L L+ LT L++ Q++ + +
Sbjct: 22 LGLN-EIPGTL--PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQ 78
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
+ L+ + L N L L L + + L +L
Sbjct: 79 SQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGS 138
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLN--YLVLNGNKLSGNLPRV 179
N+I+ P+ +L LDF N I ++ +L+ L LNGN ++G +
Sbjct: 139 NHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG-IEPG 197
Query: 180 LGSLSELEYLDLSTNKLSGSIPETLGN--LLKVHYLNLSNNQFRKEFPVELEKLVQLS-- 235
+ + L+ + I + L N + + + P E L ++S
Sbjct: 198 AFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVE 257
Query: 236 ELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGL 295
++L ++ L++L+++ +LS +PS G+ L + +S N+ L
Sbjct: 258 SINLQKHYFFNISSNTFHCFSGLQELDLTATHLSE-LPSGLVGLSTLKKLVLSANKFENL 316
Query: 296 IPNS 299
S
Sbjct: 317 CQIS 320
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 3e-39
Identities = 54/261 (20%), Positives = 89/261 (34%), Gaps = 10/261 (3%)
Query: 45 LEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEI 104
+N L +IP +L S + N L + F NLTFLD++ Y
Sbjct: 17 YNCENLGLN-EIPGTL--PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIH 73
Query: 105 WSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNY 164
++ +L TL + N + + L L F I I L N K+L
Sbjct: 74 EDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLES 133
Query: 165 LVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNL--LKVHYLNLSNNQFRK 222
L L N +S +L+ LD N + E + +L LNL+ N
Sbjct: 134 LYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI-A 192
Query: 223 EFPVELEKLVQLSELDLSHNFLGGEIPPQI--CNLESLEKLNVSHNNLSGLIPSCFEGMH 280
L+ I + ++SL + + P+ FEG+
Sbjct: 193 GIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLC 252
Query: 281 GLSC--IDISYNELLGLIPNS 299
+S I++ + + N+
Sbjct: 253 EMSVESINLQKHYFFNISSNT 273
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 2e-31
Identities = 38/189 (20%), Positives = 66/189 (34%), Gaps = 3/189 (1%)
Query: 116 TLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175
L FS N + +L L LD + QI + L+ LVL N L
Sbjct: 37 CLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFM 96
Query: 176 LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLS 235
L L++L +S L N + L L +N + +L
Sbjct: 97 AETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLK 156
Query: 236 ELDLSHNFLGGEIPPQICNLESLE--KLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELL 293
LD +N + + +L+ LN++ N+++G+ P F+ ++ + L
Sbjct: 157 VLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAV-FQSLNFGGTQNL 215
Query: 294 GLIPNSTGF 302
+I
Sbjct: 216 LVIFKGLKN 224
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* Length = 606 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 2e-31
Identities = 37/214 (17%), Positives = 70/214 (32%), Gaps = 5/214 (2%)
Query: 116 TLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175
T N + IP + L+FS N + L +L +L L ++
Sbjct: 16 TYNCENLGLN-EIPGTLPNS--TECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWI 72
Query: 176 LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLS 235
S L+ L L+ N L L + +L + L L
Sbjct: 73 HEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLE 132
Query: 236 ELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCI--DISYNELL 293
L L N + P+ E L+ L+ +N + L + + + +++ N++
Sbjct: 133 SLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192
Query: 294 GLIPNSTGFQYDPIQALRGNRGLCGDVEGFQSCK 327
G+ P + G + L +G ++
Sbjct: 193 GIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNST 226
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 178 bits (452), Expect = 2e-50
Identities = 72/320 (22%), Positives = 120/320 (37%), Gaps = 53/320 (16%)
Query: 394 YEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNE-- 451
E N + IG G +VY+G L VAVK F + ++ F+NE
Sbjct: 5 ASEPSLDLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSF------ANRQNFINEKN 57
Query: 452 IKALTEIRHRNIVKFYGFCSHPRHS-----FLVYECLERGSLAEILSNDGSIKEFSWIVR 506
I + + H NI +F LV E GSL + LS W+
Sbjct: 58 IYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSL----HTSDWVSS 113
Query: 507 TNVIKSVANALSYMHHD------CFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560
+ SV L+Y+H + P I HRD++S+NVL+ ++ +SDFG++ L
Sbjct: 114 CRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGN 173
Query: 561 SSNWTEF--------AGTFGYVAPE-------LAYTMKVTEKCDVYSFGVLALEVIKGKH 605
GT Y+APE L ++ D+Y+ G++ E+
Sbjct: 174 RLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCT 233
Query: 606 PRD-----------FISLLSSSSSNMNLS---LNEILDPRLPLPSRNIQDKLISILEVAL 651
F + + + + ++ E P+ P + + S+ E
Sbjct: 234 DLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIE 293
Query: 652 LCLEESPESRPTMQTVCQLL 671
C ++ E+R T Q + +
Sbjct: 294 DCWDQDAEARLTAQXAEERM 313
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 174 bits (442), Expect = 2e-49
Identities = 66/277 (23%), Positives = 115/277 (41%), Gaps = 32/277 (11%)
Query: 410 IGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
+G G + +GEV+ +K+ QR FL E+K + + H N++KF G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEET---QRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPI 528
+ + E ++ G+L I+ + S ++ W R + K +A+ ++Y+H I
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGIIKSMDS--QYPWSQRVSFAKDIASGMAYLHS---MNI 129
Query: 529 VHRDISSKNVLLSSEYEARVSDFGIAKFL--------------KPGSSNWTEFAGTFGYV 574
+HRD++S N L+ V+DFG+A+ + KP G ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 575 APELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634
APE+ EK DV+SFG++ E+I + M+ LN
Sbjct: 190 APEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY-----LPRTMDFGLNVRGFLDRYC 244
Query: 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
P + S + + C + PE RP+ + L
Sbjct: 245 P----PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWL 277
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 174 bits (444), Expect = 4e-49
Identities = 67/288 (23%), Positives = 129/288 (44%), Gaps = 19/288 (6%)
Query: 10 PSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRV 69
+ TNL+ L L N ++ P + NL++LTNL I N++ +L+NL +L +
Sbjct: 60 QGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKI--TDISALQNLTNLREL 115
Query: 70 HLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIP 129
+L +++++ + L++ N+ ++ S L L + + + P
Sbjct: 116 YLNEDNISD--ISPLANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP 172
Query: 130 PEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYL 189
I L L+ L + NQI P L +L SL+Y N+++ P + +++ L L
Sbjct: 173 --IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSL 226
Query: 190 DLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIP 249
+ NK++ P L NL ++ +L + NQ ++ L +L L++ N +
Sbjct: 227 KIGNNKITDLSP--LANLSQLTWLEIGTNQISD--INAVKDLTKLKMLNVGSNQISD--I 280
Query: 250 PQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIP 297
+ NL L L +++N L G+ L+ + +S N + + P
Sbjct: 281 SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 6e-47
Identities = 72/291 (24%), Positives = 131/291 (45%), Gaps = 21/291 (7%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N ++ P + N L LY+ +N ++ + NL L L ++ + + P L
Sbjct: 76 NQITDISP--LSNLVKLTNLYIGTNKITD--ISALQNLTNLRELYLNEDNISDISP--LA 129
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
NL + ++L NH ++S + + L +L ++ + + L +L+ +
Sbjct: 130 NLTKMYSLNLGANHNLSDLSPLSNM-TGLNYLTVTESKVKDV--TPIANLTDLYSLSLNY 186
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N I P + L LH +NQI P + N+ LN L + NK++ P L
Sbjct: 187 NQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LA 240
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
+LS+L +L++ TN++S + +L K+ LN+ +NQ L L QL+ L L++
Sbjct: 241 NLSQLTWLEIGTNQISD--INAVKDLTKLKMLNVGSNQISD--ISVLNNLSQLNSLFLNN 296
Query: 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
N LG E I L +L L +S N+++ + P + + D + +
Sbjct: 297 NQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVI 345
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 2e-41
Identities = 61/268 (22%), Positives = 119/268 (44%), Gaps = 19/268 (7%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N ++ ++ N TNL+ LYL +++S P + NL ++ +L + N + L
Sbjct: 98 NKIT--DISALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLS 152
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
N+ LN + + ++ + +L L +++N S L +
Sbjct: 153 NMTGLNYLTVTESKVKD--VTPIANLTDLYSLSLNYNQIED--ISPLASLTSLHYFTAYV 208
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N IT P + + +L+ L N+I P L NL L +L + N++S +
Sbjct: 209 NQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD--INAVK 262
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
L++L+ L++ +N++S L NL +++ L L+NNQ E + L L+ L LS
Sbjct: 263 DLTKLKMLNVGSNQISD--ISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQ 320
Query: 242 NFLGGEIPPQICNLESLEKLNVSHNNLS 269
N + P + +L ++ + ++ +
Sbjct: 321 NHITDIRP--LASLSKMDSADFANQVIK 346
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 2e-41
Identities = 59/284 (20%), Positives = 116/284 (40%), Gaps = 21/284 (7%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQ 73
+ L S++ V L +T L + ++ I + L +L ++L
Sbjct: 20 DLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKV-ASIQ-GIEYLTNLEYLNLNG 75
Query: 74 NHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIG 133
N +T LT L I N S+ L L + +NI+ P +
Sbjct: 76 NQITD--ISPLSNLVKLTNLYIGTNKI--TDISALQNLTNLRELYLNEDNISDISP--LA 129
Query: 134 KLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLST 193
L +++ L+ N + ++ L N+ LNYL + +K+ P + +L++L L L+
Sbjct: 130 NLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNY 186
Query: 194 NKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQIC 253
N++ P L +L +HY NQ P + + +L+ L + +N + P +
Sbjct: 187 NQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LA 240
Query: 254 NLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIP 297
NL L L + N +S + + + + L +++ N++ +
Sbjct: 241 NLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDISV 282
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 7e-39
Identities = 55/275 (20%), Positives = 104/275 (37%), Gaps = 21/275 (7%)
Query: 18 LKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLT 77
L ++ P +L + + + + L S+ ++ + +
Sbjct: 2 AATLATLPAPINQIFP--DADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKVA 57
Query: 78 GNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQ 137
+I NL +L+++ N S +L L N IT + L
Sbjct: 58 -SIQG-IEYLTNLEYLNLNGNQITDI--SPLSNLVKLTNLYIGTNKIT--DISALQNLTN 111
Query: 138 LHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLS 197
L +L + + I P L NL + L L N +L L +++ L YL ++ +K+
Sbjct: 112 LRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVK 168
Query: 198 GSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLES 257
P + NL ++ L+L+ NQ P L L L N + P + N+
Sbjct: 169 DVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTR 222
Query: 258 LEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
L L + +N ++ L P + L+ ++I N++
Sbjct: 223 LNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQI 255
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 2e-36
Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 19/256 (7%)
Query: 42 LTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFY 101
L + QI +LA R L++ +T ++ ++T L ++
Sbjct: 2 AATLATLPAPI-NQIF-PDADLAEGIRAVLQKASVTDVVT--QEELESITKLVVAGEKV- 56
Query: 102 GEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKS 161
I L LN + N IT P + L +L L N+I L NL +
Sbjct: 57 ASI-QGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKI--TDISALQNLTN 111
Query: 162 LNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFR 221
L L LN + +S P L +L+++ L+L N S L N+ ++YL ++ ++ +
Sbjct: 112 LRELYLNEDNISDISP--LANLTKMYSLNLGANHNL-SDLSPLSNMTGLNYLTVTESKVK 168
Query: 222 KEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHG 281
P + L L L L++N + P + +L SL N ++ + P M
Sbjct: 169 DVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTR 222
Query: 282 LSCIDISYNELLGLIP 297
L+ + I N++ L P
Sbjct: 223 LNSLKIGNNKITDLSP 238
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} Length = 347 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 3e-34
Identities = 59/215 (27%), Positives = 85/215 (39%), Gaps = 14/215 (6%)
Query: 8 IPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLN 67
+ N T L L + + + P I NL L +L ++ NQ+ P L +L SL+
Sbjct: 147 DLSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLH 202
Query: 68 RVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGS 127
N +T L L I +N S QL L N I+
Sbjct: 203 YFTAYVNQITDITP--VANMTRLNSLKIGNNKI--TDLSPLANLSQLTWLEIGTNQISD- 257
Query: 128 IPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELE 187
+ L +L L+ NQI L NL LN L LN N+L V+G L+ L
Sbjct: 258 -INAVKDLTKLKMLNVGSNQISD--ISVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLT 314
Query: 188 YLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRK 222
L LS N ++ P L +L K+ + +N +K
Sbjct: 315 TLFLSQNHITDIRP--LASLSKMDSADFANQVIKK 347
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 3e-48
Identities = 73/295 (24%), Positives = 126/295 (42%), Gaps = 40/295 (13%)
Query: 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
+C+G G V+RG GE VAVK F S E S RE E+ +RH NI+ F
Sbjct: 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSR--DEKSWFRET--ELYNTVMLRHENILGF 67
Query: 467 YGFCSHPRHS----FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH 522
RHS +L+ E GSL + L + ++ S+A+ L+++H
Sbjct: 68 IASDMTSRHSSTQLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHI 123
Query: 523 DCF-----PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS----NWTEFAGTFGY 573
+ F P I HRD+ SKN+L+ + ++D G+A ++ GT Y
Sbjct: 124 EIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRY 183
Query: 574 VAPEL------AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM---NLSL 624
+APE+ ++ D+++FG++ EV + + ++ + S
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSF 243
Query: 625 NEILDP------RLPLPSRNIQDKLISILEVALL--CLEESPESRPTMQTVCQLL 671
++ R +P+R D ++ L L+ C ++P +R T + + L
Sbjct: 244 EDMRKVVCVDQQRPNIPNRWFSDPTLTSL-AKLMKECWYQNPSARLTALRIKKTL 297
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 4e-47
Identities = 46/306 (15%), Positives = 94/306 (30%), Gaps = 19/306 (6%)
Query: 6 GAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLAS 65
G+ + + + LY ++ + + N + + + N +
Sbjct: 2 GSSHHHHHHSSGRENLYFQGSTALRPYHDVLSQWQRHYNADRNRWHSAWRQA----NSNN 57
Query: 66 LNRVHLEQNHLTGNISEV-FGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNI 124
L + P L++ + + L + +
Sbjct: 58 PQIETRTGRALKATADLLEDATQPGRVALELRSVPL-PQFPDQAFRLSHLQHMTIDAAGL 116
Query: 125 TGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGS-- 182
+P + + L L + N + +P + +L L L + LP L S
Sbjct: 117 M-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTD 174
Query: 183 -------LSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLS 235
L L+ L L + S+P ++ NL + L + N+ + L +L
Sbjct: 175 ASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPL-SALGPAIHHLPKLE 232
Query: 236 ELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGL 295
ELDL PP L++L + + +P + L +D+ L
Sbjct: 233 ELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSR 292
Query: 296 IPNSTG 301
+P+
Sbjct: 293 LPSLIA 298
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 6e-45
Identities = 51/276 (18%), Positives = 94/276 (34%), Gaps = 17/276 (6%)
Query: 9 PPSVGNFTNLKGLYLYSNSLSGSVPGEIGNL--MQLTNLEIDNNQLFGQIPRSLRNLASL 66
N N + +L + + + LE+ + L Q P L+ L
Sbjct: 49 AWRQANSNNPQIETRTGRALK-ATADLLEDATQPGRVALELRSVPL-PQFPDQAFRLSHL 106
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITG 126
+ ++ L + + + L L ++ N + +S +L L+
Sbjct: 107 QHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPL-RALPASIASLNRLRELSIRACPELT 164
Query: 127 SIPPEIGKLY---------QLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLP 177
+P + L L I +P + NL++L L + + LS L
Sbjct: 165 ELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LG 222
Query: 178 RVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSEL 237
+ L +LE LDL + P G + L L + P+++ +L QL +L
Sbjct: 223 PAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKL 282
Query: 238 DLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIP 273
DL +P I L + + V + + L
Sbjct: 283 DLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQ 318
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 2e-30
Identities = 39/210 (18%), Positives = 76/210 (36%), Gaps = 14/210 (6%)
Query: 8 IPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL------- 60
+P ++ F L+ L L N L ++P I +L +L L I ++P L
Sbjct: 119 LPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177
Query: 61 --RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLN 118
+ L +L + LE + ++ NL L I ++ + + +L L+
Sbjct: 178 EHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPL-SALGPAIHHLPKLEELD 235
Query: 119 FSMNNITGSIPPEIGKLYQLHKLDFS-LNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLP 177
+ PP G L +L + ++ +P+++ L L L L G LP
Sbjct: 236 LRGCTALRNYPPIFGGRAPLKRLILKDCSNLL-TLPLDIHRLTQLEKLDLRGCVNLSRLP 294
Query: 178 RVLGSLSELEYLDLSTNKLSGSIPETLGNL 207
++ L + + + +
Sbjct: 295 SLIAQLPANCIILVPPHLQAQLDQHRPVAR 324
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 3e-25
Identities = 34/191 (17%), Positives = 73/191 (38%), Gaps = 12/191 (6%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGN---------LMQLTNLEIDNNQL 52
N L A+P S+ + L+ L + + +P + + L+ L +L ++ +
Sbjct: 137 NPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGI 195
Query: 53 FGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQ 112
+P S+ NL +L + + + L+ + P L LD+ +G
Sbjct: 196 -RSLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRA 253
Query: 113 QLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKL 172
L L + ++P +I +L QL KLD + +P + L + +++ +
Sbjct: 254 PLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313
Query: 173 SGNLPRVLGSL 183
+ +
Sbjct: 314 AQLDQHRPVAR 324
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} Length = 328 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 2e-05
Identities = 9/65 (13%), Positives = 19/65 (29%), Gaps = 1/65 (1%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
++L +P + T L+ L L +P I L + + +
Sbjct: 264 SNLL-TLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQAQLDQHRPV 322
Query: 62 NLASL 66
+
Sbjct: 323 ARPAE 327
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 6e-47
Identities = 71/295 (24%), Positives = 116/295 (39%), Gaps = 40/295 (13%)
Query: 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
+ IG G V+ G+ GE VAVK F + E S RE EI +RH NI+ F
Sbjct: 42 VKQIGKGRYGEVWMGKW-RGEKVAVKVFFTT--EEASWFRE--TEIYQTVLMRHENILGF 96
Query: 467 YGFCSHPRHS----FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH 522
S +L+ + E GSL + L + + S + L ++H
Sbjct: 97 IAADIKGTGSWTQLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHT 152
Query: 523 DCF-----PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW----TEFAGTFGY 573
+ F P I HRD+ SKN+L+ ++D G+A ++ GT Y
Sbjct: 153 EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRY 212
Query: 574 VAPEL------AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM---NLSL 624
+ PE+ + D+YSFG++ EV + + ++ + S
Sbjct: 213 MPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSY 272
Query: 625 NEILDP------RLPLPSRNIQDKLISILEVALL--CLEESPESRPTMQTVCQLL 671
++ + R P+R D+ + + L+ C +P SR T V + L
Sbjct: 273 EDMREIVCIKKLRPSFPNRWSSDECLRQM-GKLMTECWAHNPASRLTALRVKKTL 326
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 3e-46
Identities = 66/267 (24%), Positives = 123/267 (46%), Gaps = 20/267 (7%)
Query: 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGF 469
IG G +VY+G+ G+V AVK + + +Q F NE+ L + RH NI+ F G+
Sbjct: 32 IGSGSFGTVYKGKW-HGDV-AVKMLNVTAPTPQQLQ-AFKNEVGVLRKTRHVNILLFMGY 88
Query: 470 CSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIV 529
+ P+ + +V + E SL L +F ++ + A + Y+H I+
Sbjct: 89 STAPQLA-IVTQWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHA---KSII 142
Query: 530 HRDISSKNVLLSSEYEARVSDFGIAKFLK--PGSSNWTEFAGTFGYVAPEL---AYTMKV 584
HRD+ S N+ L + ++ DFG+A GS + + +G+ ++APE+ +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 585 TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLI 644
+ + DVY+FG++ E++ G+ P I+ + L P L N ++
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVG---RGSLSPDLSKVRSNCPKRMK 259
Query: 645 SILEVALLCLEESPESRPTMQTVCQLL 671
++ CL++ + RP+ + +
Sbjct: 260 RLMA---ECLKKKRDERPSFPRILAEI 283
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 171 bits (435), Expect = 8e-46
Identities = 59/295 (20%), Positives = 100/295 (33%), Gaps = 12/295 (4%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
+ N+ + L S+ + +L I QL L
Sbjct: 271 TNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVP--KHFKWQSLSIIRCQLKQFPTLDLP 328
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSS--WGKCQQLGTLNF 119
L SL L N + IS P+L++LD+S N S L L+
Sbjct: 329 FLKSLT---LTMNKGS--ISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDL 383
Query: 120 SMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYLVLNGNKLSGNLPR 178
S N + L +L LDF + + +L+ L YL ++ +
Sbjct: 384 SFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDG 442
Query: 179 VLGSLSELEYLDLSTNKLSGSIP-ETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSEL 237
+ L+ L L ++ N + N + +L+LS Q + + L +L L
Sbjct: 443 IFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLL 502
Query: 238 DLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
++SHN L L SL L+ S N + L+ +++ N +
Sbjct: 503 NMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSV 557
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 2e-43
Identities = 58/305 (19%), Positives = 101/305 (33%), Gaps = 14/305 (4%)
Query: 1 MNHLSGAIPPSVGNFTNLKG--LYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPR 58
+L P + ++ L + + L ++ + + + +
Sbjct: 244 ERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSI--KYLE 301
Query: 59 SLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLN 118
+ + + + L + P L L ++ N G I L L+
Sbjct: 302 DVPKHFKWQSLSIIRCQLKQFPTLDL---PFLKSLTLTMNK--GSISFKKVALPSLSYLD 356
Query: 119 FSMNNIT--GSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNL 176
S N ++ G L LD S N + + L+ L +L + L
Sbjct: 357 LSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVT 415
Query: 177 PR-VLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVE-LEKLVQL 234
SL +L YLD+S L ++ L ++ N F+ L
Sbjct: 416 EFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNL 475
Query: 235 SELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLG 294
+ LDLS L L L+ LN+SHNNL L S + ++ LS +D S+N +
Sbjct: 476 TFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET 535
Query: 295 LIPNS 299
Sbjct: 536 SKGIL 540
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 161 bits (410), Expect = 2e-42
Identities = 59/315 (18%), Positives = 109/315 (34%), Gaps = 22/315 (6%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
+ + +L L L N + PG L L NL +L +
Sbjct: 66 CEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIG 125
Query: 62 NLASLNRVHLEQNHLTG-NISEVFGIYPNLTFLDISHNNF----YGEIWSSWGKCQQLGT 116
L +L ++++ N + + F NL +D+S+N ++ Q +
Sbjct: 126 QLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLS 185
Query: 117 LNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIP-IELGNLKSLNYLVLNGNKLSGN 175
L+ S+N I I + + +LH+L N I L NL L+ L +
Sbjct: 186 LDMSLNPID-FIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDE 244
Query: 176 L------PRVLGSLSEL--EYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVE 227
P ++ L ++ + L+ L V ++L+ ++ +
Sbjct: 245 RNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSI--KYLED 302
Query: 228 LEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDI 287
+ K + L + L + P +L L+ L ++ N S I + LS +D+
Sbjct: 303 VPKHFKWQSLSIIRCQLK-QFPTL--DLPFLKSLTLTMNKGS--ISFKKVALPSLSYLDL 357
Query: 288 SYNELLGLIPNSTGF 302
S N L S
Sbjct: 358 SRNALSFSGCCSYSD 372
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 1e-40
Identities = 58/315 (18%), Positives = 112/315 (35%), Gaps = 25/315 (7%)
Query: 2 NHLSGAIPPSVGNFTNLKG----LYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIP 57
N++ + L + N + + + ++L L + N I
Sbjct: 163 NYIQTITVNDLQFLRENPQVNLSLDMSLNPID-FIQDQAFQGIKLHELTLRGNFNSSNIM 221
Query: 58 R-SLRNLASLNRVHLEQNHLTGNIS------EVFGIYPNLTF--LDISHNNFYGEIWSSW 108
+ L+NLA L+ L + + ++T +++ N + + +
Sbjct: 222 KTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKF 281
Query: 109 GKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLN 168
+ ++ + +I ++ K ++ L Q+ +L L L L
Sbjct: 282 HCLANVSAMSLAGVSIKY--LEDVPKHFKWQSLSIIRCQLKQ---FPTLDLPFLKSLTLT 336
Query: 169 GNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNL--LKVHYLNLSNNQFRKEFPV 226
NK S + +L L YLDLS N LS S + +L + +L+LS N
Sbjct: 337 MNKGSISFK--KVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSA 393
Query: 227 ELEKLVQLSELDLSHNFLGGEIPPQ-ICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCI 285
L +L LD H+ L +LE L L++S+ N F G+ L+ +
Sbjct: 394 NFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTL 453
Query: 286 DISYNELLGLIPNST 300
++ N ++
Sbjct: 454 KMAGNSFKDNTLSNV 468
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 1e-40
Identities = 59/313 (18%), Positives = 107/313 (34%), Gaps = 20/313 (6%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
N L S NF+ L+ L L + L L+NL + N + P S
Sbjct: 41 FNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSF 100
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYG-EIWSSWGKCQQLGTLNF 119
L SL + + L S G L L+++HN + ++ + + L ++
Sbjct: 101 SGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDL 160
Query: 120 SMNNITGSIPPEIGKLYQLH----KLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175
S N I ++ L + LD SLN I I + L+ L L GN S N
Sbjct: 161 SYNYIQTITVNDLQFLRENPQVNLSLDMSLNPI-DFIQDQAFQGIKLHELTLRGNFNSSN 219
Query: 176 LPR-VLGSLSELEYLDLSTNKLSGSI------PETLGNL--LKVHYLNLSNNQFRKEFPV 226
+ + L +L+ L L + P + L + + L+ + V
Sbjct: 220 IMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIV 279
Query: 227 ELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCID 286
+ L +S + L+ + + + + L++ L + L +
Sbjct: 280 KFHCLANVSAMSLAGVSI--KYLEDVPKHFKWQSLSIIRCQLKQFP---TLDLPFLKSLT 334
Query: 287 ISYNELLGLIPNS 299
++ N+
Sbjct: 335 LTMNKGSISFKKV 347
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 2e-39
Identities = 57/312 (18%), Positives = 107/312 (34%), Gaps = 20/312 (6%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
LS +P + ++ K + L N L N +L L++ ++ ++
Sbjct: 21 QKLS-KVPDDI--PSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWH 77
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
L L+ + L N + F +L L G+ L LN +
Sbjct: 78 GLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAH 137
Query: 122 NNITG-SIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLN----YLVLNGNKLSGNL 176
N I +P L L +D S N I +L L+ L ++ N +
Sbjct: 138 NFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQ 197
Query: 177 PRVLGSLSELEYLDLSTNKLSGSIPET-LGNLLKVHYLNLSNNQFRKEFPVE------LE 229
+ + L L L N S +I +T L NL +H L +F+ E +E +E
Sbjct: 198 DQAFQGIK-LHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIME 256
Query: 230 KLVQLS--ELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDI 287
L ++ E L++ + + L ++ ++++ ++ L + I
Sbjct: 257 GLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPK--HFKWQSLSI 314
Query: 288 SYNELLGLIPNS 299
+L
Sbjct: 315 IRCQLKQFPTLD 326
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 6e-39
Identities = 59/272 (21%), Positives = 103/272 (37%), Gaps = 10/272 (3%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
+S V + L + L +L L +L + N+ I
Sbjct: 293 AGVSIKYLEDVPKHFKWQSLSIIRCQLKQF---PTLDLPFLKSLTLTMNKG--SISFKKV 347
Query: 62 NLASLNRVHLEQNHLTGNISEVFGI--YPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNF 119
L SL+ + L +N L+ + + +L LD+S N + +++ ++L L+F
Sbjct: 348 ALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDF 406
Query: 120 SMNNITGSIPPE-IGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPR 178
+ + L +L LD S + L SLN L + GN N
Sbjct: 407 QHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLS 466
Query: 179 -VLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSEL 237
V + + L +LDLS +L L ++ LN+S+N +L LS L
Sbjct: 467 NVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTL 526
Query: 238 DLSHNFLGGEIPPQICNLESLEKLNVSHNNLS 269
D S N + +SL N+++N+++
Sbjct: 527 DCSFNRIETSKGILQHFPKSLAFFNLTNNSVA 558
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* Length = 606 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 6e-37
Identities = 61/312 (19%), Positives = 110/312 (35%), Gaps = 19/312 (6%)
Query: 6 GAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLAS 65
G++ P + N+ LS VP +I + N+++ N L S N +
Sbjct: 2 GSLNPCIEVVPNIT-YQCMDQKLS-KVPDDIPS--STKNIDLSFNPLKILKSYSFSNFSE 57
Query: 66 LNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNIT 125
L + L + + + + +L+ L ++ N S+ L L +
Sbjct: 58 LQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLA 117
Query: 126 GSIPPEIGKLYQLHKLDFSLNQIVG-EIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLS 184
IG+L L KL+ + N I ++P NL +L ++ L+ N + L L
Sbjct: 118 SLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLR 177
Query: 185 EL----EYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKE-FPVELEKLVQLSELDL 239
E LD+S N + I + +K+H L L N L+ L L L
Sbjct: 178 ENPQVNLSLDMSLNPID-FIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRL 236
Query: 240 SHNFLGGEIPPQICNLESLEKL--------NVSHNNLSGLIPSCFEGMHGLSCIDISYNE 291
E +I +E L +++ N F + +S + ++
Sbjct: 237 ILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVS 296
Query: 292 LLGLIPNSTGFQ 303
+ L F+
Sbjct: 297 IKYLEDVPKHFK 308
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 8e-46
Identities = 55/281 (19%), Positives = 100/281 (35%), Gaps = 43/281 (15%)
Query: 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGF 469
IG G VY G GEV A++ +E ++ F E+ A + RH N+V F G
Sbjct: 41 IGKGRFGQVYHGRW-HGEV-AIRLIDIERDNEDQLK-AFKREVMAYRQTRHENVVLFMGA 97
Query: 470 CSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIV 529
C P H ++ + +L ++ + + + + + Y+H I+
Sbjct: 98 CMSPPHLAIITSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHA---KGIL 152
Query: 530 HRDISSKNVLLSSEYEARVSDFGIAKFLKPG-----SSNWTEFAGTFGYVAPEL------ 578
H+D+ SKNV + ++DFG+ G ++APE+
Sbjct: 153 HKDLKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSP 211
Query: 579 ---AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEIL-----DP 630
+ ++ DV++ G + E+ + P I+
Sbjct: 212 DTEEDKLPFSKHSDVFALGTIWYELHAREWPFK------------TQPAEAIIWQMGTGM 259
Query: 631 RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ L + ++ IL C E RPT + +L
Sbjct: 260 KPNLSQIGMGKEISDILL---FCWAFEQEERPTFTKLMDML 297
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 4e-45
Identities = 68/295 (23%), Positives = 120/295 (40%), Gaps = 40/295 (13%)
Query: 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
++ IG G V+RG+ GE VAVK F S E S RE EI +RH NI+ F
Sbjct: 47 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFRE--AEIYQTVMLRHENILGF 101
Query: 467 YGFCSHPRHS----FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH 522
+ + +LV + E GSL + L+ + + S A+ L+++H
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHM 157
Query: 523 DCF-----PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS----NWTEFAGTFGY 573
+ P I HRD+ SKN+L+ ++D G+A + GT Y
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217
Query: 574 VAPEL------AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFIS---LLSSSSSNMNLSL 624
+APE+ + ++ D+Y+ G++ E+ + L + S+
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 277
Query: 625 NEILDP------RLPLPSRNIQDKLISILEVALL--CLEESPESRPTMQTVCQLL 671
E+ R +P+R + + ++ ++ C + +R T + + L
Sbjct: 278 EEMRKVVCEQKLRPNIPNRWQSCEALRVM-AKIMRECWYANGAARLTALRIKKTL 331
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 155 bits (395), Expect = 3e-41
Identities = 80/296 (27%), Positives = 131/296 (44%), Gaps = 23/296 (7%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
+ L V NL + +N L+ P + NL +L ++ ++NNQ+ P L
Sbjct: 54 DRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LA 109
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
NL +L + L N +T + NL L++S N S+ L L+F
Sbjct: 110 NLTNLTGLTLFNNQITD--IDPLKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFG- 164
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N +T P + L L +LD S N++ L L +L L+ N++S P LG
Sbjct: 165 NQVTDLKP--LANLTTLERLDISSNKV--SDISVLAKLTNLESLIATNNQISDITP--LG 218
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
L+ L+ L L+ N+L TL +L + L+L+NNQ P L L +L+EL L
Sbjct: 219 ILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGA 274
Query: 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIP 297
N + P + L +L L ++ N L + P + L+ + + +N + + P
Sbjct: 275 NQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP 326
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 152 bits (385), Expect = 5e-40
Identities = 75/296 (25%), Positives = 128/296 (43%), Gaps = 25/296 (8%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
+++ + + + L + + L LT + NNQL P L+
Sbjct: 34 TNVTDTVS--QTDLDQVTTLQADRLGIKS--IDGVEYLNNLTQINFSNNQLTDITP--LK 87
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
NL L + + N + +I+ + + NLT L + +N L L S
Sbjct: 88 NLTKLVDILMNNNQIA-DITPLANL-TNLTGLTLFNNQITDIDPL--KNLTNLNRLELSS 143
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N I+ + L L +L F NQ+ P L NL +L L ++ NK+S VL
Sbjct: 144 NTISD--ISALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSD--ISVLA 196
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
L+ LE L + N++S P LG L + L+L+ NQ + L L L++LDL++
Sbjct: 197 KLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLAN 252
Query: 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIP 297
N + P + L L +L + N +S + P G+ L+ ++++ N+L + P
Sbjct: 253 NQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP 304
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 150 bits (382), Expect = 1e-39
Identities = 70/284 (24%), Positives = 122/284 (42%), Gaps = 23/284 (8%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQ 73
L +++ +V +L Q+T L+ D + + + L +L +++
Sbjct: 22 ALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGI--KSIDGVEYLNNLTQINFSN 77
Query: 74 NHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIG 133
N LT +I+ L + +++N + L L N IT P +
Sbjct: 78 NQLT-DITP-LKNLTKLVDILMNNNQI--ADITPLANLTNLTGLTLFNNQITDIDP--LK 131
Query: 134 KLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLST 193
L L++L+ S N I L L SL L N+++ P L +L+ LE LD+S+
Sbjct: 132 NLTNLNRLELSSNTISD--ISALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISS 186
Query: 194 NKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQIC 253
NK+S L L + L +NNQ P L L L EL L+ N L + +
Sbjct: 187 NKVSD--ISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQL--KDIGTLA 240
Query: 254 NLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIP 297
+L +L L++++N +S L P G+ L+ + + N++ + P
Sbjct: 241 SLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP 282
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 2e-39
Identities = 70/303 (23%), Positives = 119/303 (39%), Gaps = 23/303 (7%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N +S ++ T+L+ L N ++ P + NL L L+I +N++ L
Sbjct: 144 NTISD--ISALSGLTSLQQLSF-GNQVTDLKP--LANLTTLERLDISSNKV--SDISVLA 196
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
L +L + N ++ GI NL L ++ N + + L L+ +
Sbjct: 197 KLTNLESLIATNNQISD--ITPLGILTNLDELSLNGNQL--KDIGTLASLTNLTDLDLAN 252
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N I+ P + L +L +L NQI P L L +L L LN N+L P +
Sbjct: 253 NQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--IS 306
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
+L L YL L N +S P + +L K+ L NN+ L L ++ L H
Sbjct: 307 NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGH 362
Query: 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTG 301
N + P + NL + +L ++ + + + + + L+ S G
Sbjct: 363 NQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDG 420
Query: 302 FQY 304
Y
Sbjct: 421 GSY 423
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 2e-32
Identities = 61/256 (23%), Positives = 102/256 (39%), Gaps = 20/256 (7%)
Query: 42 LTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFY 101
L + I + QI + LA + L + ++T +S +T L
Sbjct: 3 LGSATITQDTPINQIF-TDTALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGI- 58
Query: 102 GEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKS 161
+ L +NFS N +T P + L +L + + NQI P L NL +
Sbjct: 59 -KSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTN 113
Query: 162 LNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFR 221
L L L N+++ P L +L+ L L+LS+N +S L L + L+ N
Sbjct: 114 LTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFGNQV-- 167
Query: 222 KEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHG 281
L L L LD+S N + + L +LE L ++N +S + P +
Sbjct: 168 -TDLKPLANLTTLERLDISSNKV--SDISVLAKLTNLESLIATNNQISDITP--LGILTN 222
Query: 282 LSCIDISYNELLGLIP 297
L + ++ N+L +
Sbjct: 223 LDELSLNGNQLKDIGT 238
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A Length = 466 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 8e-26
Identities = 51/218 (23%), Positives = 83/218 (38%), Gaps = 16/218 (7%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N L ++ + TNL L L +N +S P + L +LT L++ NQ+ P L
Sbjct: 231 NQLKD--IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LA 284
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
L +L + L +N L NLT+L + NN S +L L F
Sbjct: 285 GLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDI--SPVSSLTKLQRLFFYN 340
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N ++ + L ++ L NQI P+ NL + L LN +
Sbjct: 341 NKVSD--VSSLANLTNINWLSAGHNQISDLTPL--ANLTRITQLGLNDQAWTNAPVNYKA 396
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQ 219
++S + T L P T+ + +++ N
Sbjct: 397 NVSIPNTVKNVTGAL--IAPATISDGGSYTEPDITWNL 432
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 3e-41
Identities = 53/289 (18%), Positives = 107/289 (37%), Gaps = 16/289 (5%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
AI N K + +SL ++ + + L++ N L L L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITG 126
++L N L ++ + L LD+++N + TL+ + NNI+
Sbjct: 61 ELLNLSSNVLY-ETLDLESL-STLRTLDLNNNYV-----QELLVGPSIETLHAANNNIS- 112
Query: 127 SIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSG-NLPRVLGSLSE 185
+ G+ + + N+I ++ G + YL L N++ N + S
Sbjct: 113 RVSCSRGQ--GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDT 170
Query: 186 LEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLG 245
LE+L+L N + + + K+ L+LS+N+ E + ++ + L +N L
Sbjct: 171 LEHLNLQYNFIY-DVKGQV-VFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKL- 226
Query: 246 GEIPPQICNLESLEKLNVSHNNLSGL-IPSCFEGMHGLSCIDISYNELL 293
I + ++LE ++ N + F + + + L
Sbjct: 227 VLIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKL 275
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 2e-38
Identities = 57/293 (19%), Positives = 113/293 (38%), Gaps = 24/293 (8%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
+ L A+ + N+K L L N LS ++ +L L + +N L + L
Sbjct: 20 SSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVL-YETL-DLE 77
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
+L++L + L N++ + P++ L ++NN + S + Q + +
Sbjct: 78 SLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNI-SRV--SCSRGQGKKNIYLAN 129
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVG-EIPIELGNLKSLNYLVLNGNKLSGNLPRVL 180
N IT + G ++ LD LN+I + +L +L L N + ++
Sbjct: 130 NKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVK-GQ 187
Query: 181 GSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLS 240
++L+ LDLS+NKL+ + + V +++L NN+ L L DL
Sbjct: 188 VVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLR 245
Query: 241 HNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELL 293
N + +L + + + + + G + + + L
Sbjct: 246 GNGF---------HCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLG 289
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 1e-30
Identities = 45/264 (17%), Positives = 85/264 (32%), Gaps = 38/264 (14%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N L + + + L+ L L +N + E+ + L NN + ++ S
Sbjct: 68 NVLYE--TLDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNI-SRVSCS-- 117
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYG-EIWSSWGKCQQLGTLNFS 120
++L N +T G + +LD+ N L LN
Sbjct: 118 RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQ 177
Query: 121 MNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVL 180
N I + ++ +L LD S N++ + E + + ++ L NKL + + L
Sbjct: 178 YNFIY-DVKGQVV-FAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKAL 233
Query: 181 GSLSELEYLDLSTNKLS-GSIPETLGNLLKVHYLNLSNNQFRKEFPVE------------ 227
LE+ DL N G++ + +V + + E
Sbjct: 234 RFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGA 293
Query: 228 ----------LEKLVQLSELDLSH 241
++L+ L H
Sbjct: 294 YCCEDLPAPFADRLIALGHHHHHH 317
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} Length = 317 | Back alignment and structure |
|---|
Score = 93.9 bits (234), Expect = 4e-21
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 10/142 (7%)
Query: 158 NLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSN 217
N + + L L + S ++ LDLS N LS L K+ LNLS+
Sbjct: 8 NGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSS 67
Query: 218 NQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFE 277
N + ++LE L L LDL++N++ ++ S+E L+ ++NN+S + S +
Sbjct: 68 NVLYE--TLDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNISRVSCSRGQ 120
Query: 278 GMHGLSCIDISYNELLGLIPNS 299
G + ++ N++ L
Sbjct: 121 GKKNI---YLANNKITMLRDLD 139
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 2e-39
Identities = 70/291 (24%), Positives = 116/291 (39%), Gaps = 44/291 (15%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
+ L+ +P + ++ L + N+L+ S+P L LE+ NQL +P
Sbjct: 50 SGLT-TLPDCLP--AHITTLVIPDNNLT-SLPALPPE---LRTLEVSGNQL-TSLPVLPP 101
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
L L+ HL S L L I N + L L+ S
Sbjct: 102 GLLELSIFSNPLTHLPALPS-------GLCKLWIFGNQL-TSLPVLPP---GLQELSVSD 150
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N + S+P +L KL NQ+ +P+ L+ L+ ++ N+L+ +LP +
Sbjct: 151 NQLA-SLPALPS---ELCKLWAYNNQLT-SLPMLPSGLQELS---VSDNQLA-SLPTLPS 201
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
L +L + N+L+ S+P L L +S N+ PV +L EL +S
Sbjct: 202 ELYKLWAYN---NRLT-SLPALPSGL---KELIVSGNRLT-SLPVLPS---ELKELMVSG 250
Query: 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
N L +P L S L+V N L+ L P + + +++ N L
Sbjct: 251 NRL-TSLPMLPSGLLS---LSVYRNQLTRL-PESLIHLSSETTVNLEGNPL 296
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 1e-33
Identities = 60/281 (21%), Positives = 98/281 (34%), Gaps = 37/281 (13%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N L+ ++P L L L L I NQL +P
Sbjct: 91 NQLT-SLPVLPPGLLELSIFSNPLTHLPAL-------PSGLCKLWIFGNQL-TSLPVLPP 141
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
L L+ + N L ++ + L L +N + L L+ S
Sbjct: 142 GLQELS---VSDNQLA-SLPALPS---ELCKLWAYNNQL-TSLPMLPS---GLQELSVSD 190
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N + S+P +LY+L + N++ +P LK L ++GN+L+ +LP
Sbjct: 191 NQLA-SLPTLPSELYKLWAYN---NRLT-SLPALPSGLKELI---VSGNRLT-SLPV--- 238
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
SEL+ L +S N+L+ S+P L L++ NQ P L L + ++L
Sbjct: 239 LPSELKELMVSGNRLT-SLPMLPSGL---LSLSVYRNQLT-RLPESLIHLSSETTVNLEG 293
Query: 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGL 282
N L + + S + S L
Sbjct: 294 NPLSERTLQALREITSAPGYSGPIIRFDMAGASAPRETRAL 334
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 8e-28
Identities = 58/236 (24%), Positives = 90/236 (38%), Gaps = 38/236 (16%)
Query: 60 LRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNF 119
A LN + ++ LT + + + ++T L I NN + + + + TL
Sbjct: 39 NNGNAVLN---VGESGLT-TLPD--CLPAHITTLVIPDNNL-TSLPALPPELR---TLEV 88
Query: 120 SMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRV 179
S N +T S+P L +L L +P L L + GN+L+ +LP +
Sbjct: 89 SGNQLT-SLPVLPPGLLELSIFSNPLTH----LPALPSGLCKLW---IFGNQLT-SLPVL 139
Query: 180 LGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDL 239
L+ L +S N+L+ S+P L L NNQ P+ L EL +
Sbjct: 140 PPG---LQELSVSDNQLA-SLPALPSEL---CKLWAYNNQL-TSLPMLPS---GLQELSV 188
Query: 240 SHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGL 295
S N L +P L L N +L L L + +S N L L
Sbjct: 189 SDNQL-ASLPTLPSELYKLWAYNNRLTSLPALPSG-------LKELIVSGNRLTSL 236
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 99 bits (249), Expect = 5e-22
Identities = 52/245 (21%), Positives = 83/245 (33%), Gaps = 30/245 (12%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N L+ ++P L L+ Y+N L+ S+P L L + +NQL +P
Sbjct: 151 NQLA-SLPALPSE---LCKLWAYNNQLT-SLPMLPSGL---QELSVSDNQL-ASLPTLPS 201
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
L L + L S L L +S N + +L L S
Sbjct: 202 ELYKLWAYNNRLTSLPALPS-------GLKELIVSGNRL-TSLPVLPS---ELKELMVSG 250
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N +T S+P L L NQ+ +P L +L S + L GN LS + L
Sbjct: 251 NRLT-SLPMLPS---GLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALR 305
Query: 182 SLSELEYLD---LSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELD 238
++ + + S P L L + + P ++ + D
Sbjct: 306 EITSAPGYSGPIIRFDMAGASAPRETRALHLAAADWLVPAREGE--PAPADRWHMFGQED 363
Query: 239 LSHNF 243
+ F
Sbjct: 364 NADAF 368
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} Length = 622 | Back alignment and structure |
|---|
Score = 74.5 bits (183), Expect = 5e-14
Identities = 24/122 (19%), Positives = 43/122 (35%), Gaps = 15/122 (12%)
Query: 183 LSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHN 242
+ L++ + L+ ++P+ L + L + +N P +L L++S N
Sbjct: 39 NNGNAVLNVGESGLT-TLPDCLPAHITT--LVIPDNNL-TSLPALPP---ELRTLEVSGN 91
Query: 243 FLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGF 302
L +P L L + +L L L + I N+L L G
Sbjct: 92 QLT-SLPVLPPGLLELSIFSNPLTHLPALPSG-------LCKLWIFGNQLTSLPVLPPGL 143
Query: 303 QY 304
Q
Sbjct: 144 QE 145
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 6e-39
Identities = 54/289 (18%), Positives = 106/289 (36%), Gaps = 16/289 (5%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
AI N K + +SL ++ + + L++ N L L L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITG 126
++L N L + L LD+++N + TL+ + NNI+
Sbjct: 61 ELLNLSSNVLYETLD--LESLSTLRTLDLNNNYV-----QELLVGPSIETLHAANNNIS- 112
Query: 127 SIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSG-NLPRVLGSLSE 185
+ G+ + + N+I ++ G + YL L N++ N + S
Sbjct: 113 RVSCSRGQ--GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDT 170
Query: 186 LEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLG 245
LE+L+L N + + + K+ L+LS+N+ E + ++ + L +N L
Sbjct: 171 LEHLNLQYNFIY-DVKGQV-VFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKL- 226
Query: 246 GEIPPQICNLESLEKLNVSHNNLS-GLIPSCFEGMHGLSCIDISYNELL 293
I + ++LE ++ N G + F + + + L
Sbjct: 227 VLIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKL 275
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 147 bits (373), Expect = 2e-38
Identities = 49/298 (16%), Positives = 104/298 (34%), Gaps = 15/298 (5%)
Query: 31 SVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNL 90
++ N + ++ ++ L + ++ ++ + L N L+ + + L
Sbjct: 1 AIHEIKQNGNRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKL 60
Query: 91 TFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVG 150
L++S N Y L TL+ + N + E+ + L + N I
Sbjct: 61 ELLNLSSNVLYET--LDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNISR 113
Query: 151 EIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSG-SIPETLGNLLK 209
+ + + L NK++ G S ++YLDL N++ + E +
Sbjct: 114 ---VSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDT 170
Query: 210 VHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLS 269
+ +LNL N + ++ +L LDLS N L + P+ + + +++ +N L
Sbjct: 171 LEHLNLQYNFI-YDVKGQV-VFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV 227
Query: 270 GLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCGDVEGFQSCK 327
I L D+ N + +Q + + + C
Sbjct: 228 L-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECT 284
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 6e-38
Identities = 57/292 (19%), Positives = 108/292 (36%), Gaps = 16/292 (5%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
+ L A+ + N+K L L N LS ++ +L L + +N L L
Sbjct: 20 SSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVL--YETLDLE 77
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
+L++L + L N++ + P++ L ++NN + S + Q + +
Sbjct: 78 SLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNI-SRV--SCSRGQGKKNIYLAN 129
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVG-EIPIELGNLKSLNYLVLNGNKLSGNLPRVL 180
N IT + G ++ LD LN+I + +L +L L N + ++ +
Sbjct: 130 NKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY-DVKGQV 188
Query: 181 GSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLS 240
++L+ LDLS+NKL+ + + V +++L NN+ L L DL
Sbjct: 189 -VFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLR 245
Query: 241 HNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
N ++ V+ + L E +
Sbjct: 246 GNGFHCGTLRDF-FSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGAYCC 296
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 4e-36
Identities = 46/328 (14%), Positives = 94/328 (28%), Gaps = 46/328 (14%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N L + + + L+ L L +N + E+ + L NN + +
Sbjct: 68 NVLYE--TLDLESLSTLRTLDLNNNYVQ-----ELLVGPSIETLHAANNNISRVSCSRGQ 120
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYG-EIWSSWGKCQQLGTLNFS 120
++ L N +T G + +LD+ N L LN
Sbjct: 121 GKKNIY---LANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQ 177
Query: 121 MNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVL 180
N I + ++ +L LD S N++ + E + + ++ L NKL + + L
Sbjct: 178 YNFIY-DVKGQVV-FAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKAL 233
Query: 181 GSLSELEYLDLSTNKLS-GSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDL 239
LE+ DL N G++ + +V ++ +K E+ +
Sbjct: 234 RFSQNLEHFDLRGNGFHCGTLRDFFSKNQRV--QTVAKQTVKKLTGQNEEECTVPTLGHY 291
Query: 240 SHNFLG----------------------------GEIPPQICNLESLEKLNVSHNNLSGL 271
+ + N +++ +
Sbjct: 292 GAYCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTV 351
Query: 272 IPSCFEGMHGLSCIDISYNELLGLIPNS 299
I ++ L + N
Sbjct: 352 IDQVTLRKQAKITLEQKKKALDEQVSNG 379
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 487 | Back alignment and structure |
|---|
Score = 98.0 bits (244), Expect = 1e-21
Identities = 39/275 (14%), Positives = 80/275 (29%), Gaps = 11/275 (4%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N + + V F LK L L SN L+ + E + +T + + NN+L I ++LR
Sbjct: 179 NFIY-DVKGQV-VFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKL-VLIEKALR 234
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
+L L N F N ++ + +C ++
Sbjct: 235 FSQNLEHFDLRGNGFHCGTLRDF-FSKNQRVQTVAKQTVKKLTGQNEEECTVPTLGHYGA 293
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQI----VGEIPIELGNLKSLNYLVLNGNKLSGNLP 177
P +L L + + +L + E N + + +
Sbjct: 294 YCCEDLPAPFADRLIALKRKEHALLSGQGSETERLECERENQARQREIDALKEQYRTVID 353
Query: 178 RVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSEL 237
+V L+ L + ++ + E E+ L L
Sbjct: 354 QVTLRKQAKITLEQKKKALDEQVSNGRRAHAELDGTLQQAVG-QIELQHATEEQSPLQLL 412
Query: 238 DLSHN-FLGGEIPPQICNLESLEKLNVSHNNLSGL 271
+ + Q ++ ++ + + L
Sbjct: 413 RAIVKRYEEMYVEQQSVQNNAIRDWDMYQHKETQL 447
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 1e-38
Identities = 65/271 (23%), Positives = 113/271 (41%), Gaps = 28/271 (10%)
Query: 408 QCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
IG G +VY+G + + VA + L++ QR F E + L ++H NIV+F
Sbjct: 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQR-FKEEAEMLKGLQHPNIVRF 90
Query: 467 YG----FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH 522
Y + LV E + G+L L +K + + + L ++H
Sbjct: 91 YDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVL---RSWCRQILKGLQFLH- 146
Query: 523 DCFPPIVHRDISSKNVLLSSEY-EARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT 581
PPI+HRD+ N+ ++ ++ D G+A + +S GT ++APE+ Y
Sbjct: 147 TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR--ASFAKAVIGTPEFMAPEM-YE 203
Query: 582 MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641
K E DVY+FG+ LE+ ++P S N + P +
Sbjct: 204 EKYDESVDVYAFGMCMLEMATSEYP-------YSECQNAAQIYRRVTSGVKPASFDKVAI 256
Query: 642 KLI-SILEVALLCLEESPESRPTMQTVCQLL 671
+ I+E C+ ++ + R ++ LL
Sbjct: 257 PEVKEIIE---GCIRQNKDERY---SIKDLL 281
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 6e-38
Identities = 66/293 (22%), Positives = 113/293 (38%), Gaps = 22/293 (7%)
Query: 2 NHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
+ I ++ LY+ N++ P N+ LT L ++ N L +PR +
Sbjct: 79 LQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL-SSLPRGI 136
Query: 61 -RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNF 119
N L + + N+L + F +L L +S N + L N
Sbjct: 137 FHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL-THV--DLSLIPSLFHANV 193
Query: 120 SMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRV 179
S N ++ + + +LD S N I + L L L N L+ +
Sbjct: 194 SYNLLS-----TLAIPIAVEELDASHNSINV---VRGPVNVELTILKLQHNNLT-DTA-W 243
Query: 180 LGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDL 239
L + L +DLS N+L + + ++ L +SNN+ + + + L LDL
Sbjct: 244 LLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDL 302
Query: 240 SHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
SHN L + + LE L + HN++ L S H L + +S+N+
Sbjct: 303 SHNHL-LHVERNQPQFDRLENLYLDHNSIVTLKLSTH---HTLKNLTLSHNDW 351
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 3e-36
Identities = 65/270 (24%), Positives = 110/270 (40%), Gaps = 22/270 (8%)
Query: 2 NHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEI-GNLMQLTNLEIDNNQLFGQIPRS 59
N + +PP V N L L L N LS S+P I N +LT L + NN L +
Sbjct: 103 NAIR-YLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDT 160
Query: 60 LRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNF 119
+ SL + L N LT ++ + P+L ++S+N S+ + L+
Sbjct: 161 FQATTSLQNLQLSSNRLT-HVD--LSLIPSLFHANVSYNLL-----STLAIPIAVEELDA 212
Query: 120 SMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRV 179
S N+I + + +L L N + + L N L + L+ N+L +
Sbjct: 213 SHNSIN-VVRGPV--NVELTILKLQHNNLT-DTA-WLLNYPGLVEVDLSYNELEKIMYHP 267
Query: 180 LGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDL 239
+ LE L +S N+L ++ + + L+LS+N + +L L L
Sbjct: 268 FVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYL 325
Query: 240 SHNFLGGEIPPQICNLESLEKLNVSHNNLS 269
HN + + +L+ L +SHN+
Sbjct: 326 DHNSIV-TLKLS--THHTLKNLTLSHNDWD 352
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 3e-35
Identities = 60/294 (20%), Positives = 118/294 (40%), Gaps = 18/294 (6%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
M N K + ++++ + + Q+ L +++ Q+ +
Sbjct: 30 MQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAF 89
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFS 120
++ ++++ N + VF P LT L + N+ + +L TL+ S
Sbjct: 90 AYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMS 149
Query: 121 MNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRV 179
NN+ I + L L S N++ ++L + SL + ++ N LS
Sbjct: 150 NNNLE-RIEDDTFQATTSLQNLQLSSNRLTH---VDLSLIPSLFHANVSYNLLS-----T 200
Query: 180 LGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDL 239
L +E LD S N ++ + +++ L L +N + L L E+DL
Sbjct: 201 LAIPIAVEELDASHNSIN-VVRG--PVNVELTILKLQHNNLT-DTAW-LLNYPGLVEVDL 255
Query: 240 SHNFLGGEIPPQI-CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
S+N L +I ++ LE+L +S+N L + + + L +D+S+N L
Sbjct: 256 SYNEL-EKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHL 307
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 4e-30
Identities = 51/281 (18%), Positives = 98/281 (34%), Gaps = 27/281 (9%)
Query: 31 SVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNL 90
+ + ++ ID L + V + + + + + + +
Sbjct: 12 CIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQV 71
Query: 91 TFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEI-GKLYQLHKLDFSLNQIV 149
L+++ ++ + L N I +PP + + L L N +
Sbjct: 72 ELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLS 130
Query: 150 GEIPIEL-GNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIP------- 201
+P + N L L ++ N L + + L+ L LS+N+L+ +
Sbjct: 131 -SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVDLSLIPSL 188
Query: 202 ----------ETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQ 251
TL + V L+ S+N V V+L+ L L HN L
Sbjct: 189 FHANVSYNLLSTLAIPIAVEELDASHNSINV---VRGPVNVELTILKLQHNNL--TDTAW 243
Query: 252 ICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
+ N L ++++S+N L ++ F M L + IS N L
Sbjct: 244 LLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRL 284
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} Length = 390 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 1e-20
Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 4/164 (2%)
Query: 135 LYQLHKLDFSLNQIVGEIPI--ELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLS 192
Y D ++ ++ E L + + + + +L S ++E L+L+
Sbjct: 18 QYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLN 77
Query: 193 TNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQI 252
++ + L + N R P + + L+ L L N L +P I
Sbjct: 78 DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL-SSLPRGI 136
Query: 253 -CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGL 295
N L L++S+NNL + F+ L + +S N L +
Sbjct: 137 FHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 180
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 143 bits (364), Expect = 3e-37
Identities = 66/300 (22%), Positives = 114/300 (38%), Gaps = 33/300 (11%)
Query: 8 IPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLN 67
I P + T L+ +S++L+ +P E N+ T ++ P +
Sbjct: 3 INPRNVSNTFLQEPLRHSSNLT-EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMA 61
Query: 68 RVHLEQNHLTG---------NISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLN 118
L +S + + P+L L S N+ E+ + L N
Sbjct: 62 VSRLRDCLDRQAHELELNNLGLSSLPELPPHLESLVASCNSL-TELPELPQSLKSLLVDN 120
Query: 119 FSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPR 178
++ ++ P L L S NQ+ ++P EL N L + ++ N L LP
Sbjct: 121 NNLKALSDLPP-------LLEYLGVSNNQLE-KLP-ELQNSSFLKIIDVDNNSLK-KLPD 170
Query: 179 VLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELD 238
+ S LE++ N+L +PE L NL + + NN K+ P + + L +
Sbjct: 171 LPPS---LEFIAAGNNQLE-ELPE-LQNLPFLTAIYADNNSL-KKLP---DLPLSLESIV 221
Query: 239 LSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPN 298
+N L E P++ NL L + +N L L P + L+ D +L L +
Sbjct: 222 AGNNIL--EELPELQNLPFLTTIYADNNLLKTL-PDLPPSLEALNVRDNYLTDLPELPQS 278
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 7e-37
Identities = 64/304 (21%), Positives = 108/304 (35%), Gaps = 44/304 (14%)
Query: 8 IPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLM-------------QLTNLEIDNNQLFG 54
+P N + Y + + P G Q LE++N L
Sbjct: 26 MPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGL-S 84
Query: 55 QIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQL 114
+P +L SL N LT + E+ +L + + L
Sbjct: 85 SLPELPPHLESLV---ASCNSLT-ELPELPQSLKSLLVDNNNLKALSDLP-------PLL 133
Query: 115 GTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSG 174
L S N + + PE+ L +D N + ++P +L+ + N+L
Sbjct: 134 EYLGVSNNQLE-KL-PELQNSSFLKIIDVDNNSLK-KLPDLPPSLEFIA---AGNNQLE- 186
Query: 175 NLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQL 234
LP L +L L + N L +P+ +L + NN + EL+ L L
Sbjct: 187 ELP-ELQNLPFLTAIYADNNSLK-KLPDLPLSL---ESIVAGNNILEE--LPELQNLPFL 239
Query: 235 SELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLG 294
+ + +N L +P +LE+ LNV N L+ L P + + L + ++ L
Sbjct: 240 TTIYADNNLL-KTLPDLPPSLEA---LNVRDNYLTDL-PELPQSLTFLDVSENIFSGLSE 294
Query: 295 LIPN 298
L PN
Sbjct: 295 LPPN 298
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 1e-34
Identities = 62/319 (19%), Positives = 115/319 (36%), Gaps = 59/319 (18%)
Query: 10 PSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRV 69
P + N + LK + + +NSL +P +L + NNQL ++P L+NL L +
Sbjct: 147 PELQNSSFLKIIDVDNNSLK-KLPDLPPSL---EFIAAGNNQL-EELP-ELQNLPFLTAI 200
Query: 70 HLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIP 129
+ + N L ++ + +L + +N E L T+ N + ++P
Sbjct: 201 YADNNSLK----KLPDLPLSLESIVAGNNIL--EELPELQNLPFLTTIYADNNLLK-TLP 253
Query: 130 PEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSG-------------NL 176
L L+ D L ++P +L L+ + LS +
Sbjct: 254 DLPPSLEALNVRDNYLT----DLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEI 309
Query: 177 PRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSE 236
+ LE L++S NKL +P L L S N E P + L +
Sbjct: 310 RSLCDLPPSLEELNVSNNKLI-ELPALPPRL---ERLIASFNHL-AEVPELPQNL---KQ 361
Query: 237 LDLSHNFLGGEIPPQICNLE----------------SLEKLNVSHNNLSGLIPSCFEGMH 280
L + +N L E P ++E +L++L+V N L +
Sbjct: 362 LHVEYNPLR-EFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREF----PDIPE 416
Query: 281 GLSCIDISYNELLGLIPNS 299
+ + ++ ++ +
Sbjct: 417 SVEDLRMNSERVVDPYEFA 435
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 6e-34
Identities = 70/310 (22%), Positives = 113/310 (36%), Gaps = 51/310 (16%)
Query: 2 NHLSGAIPPSVGN-------------FTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEID 48
+ PP G L L + LS S+P +L +L
Sbjct: 44 SEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS-SLPELPPHL---ESLVAS 99
Query: 49 NNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSW 108
N L ++P ++L SL + L+ P L +L +S+N E
Sbjct: 100 CNSL-TELPELPQSLKSLLVDNNNLKALSDLP-------PLLEYLGVSNNQL--EKLPEL 149
Query: 109 GKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLN 168
L ++ N++ +P L + NQ+ E+P EL NL L + +
Sbjct: 150 QNSSFLKIIDVDNNSLK-KLPDLPP---SLEFIAAGNNQLE-ELP-ELQNLPFLTAIYAD 203
Query: 169 GNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVEL 228
N L LP + SL E + N L +PE L NL + + NN + P
Sbjct: 204 NNSLK-KLPDLPLSL---ESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLK-TLP--- 253
Query: 229 EKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDIS 288
+ L L++ N+L ++P +L L+ + LS L P+ L ++ S
Sbjct: 254 DLPPSLEALNVRDNYLT-DLPELPQSLTFLDVSENIFSGLSELPPN-------LYYLNAS 305
Query: 289 YNELLGLIPN 298
NE+ L
Sbjct: 306 SNEIRSLCDL 315
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 2e-32
Identities = 69/306 (22%), Positives = 118/306 (38%), Gaps = 52/306 (16%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPG---------------EIGNLMQLTNLE 46
N L+ +P + +L +LS P E+ N L ++
Sbjct: 101 NSLT-ELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIID 159
Query: 47 IDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWS 106
+DNN L ++P +L + N L + E P LT + +N+
Sbjct: 160 VDNNSL-KKLPDLPPSLEFIA---AGNNQLE-ELPE-LQNLPFLTAIYADNNSLKKLP-- 211
Query: 107 SWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLV 166
L ++ N + PE+ L L + N + +P +L++LN
Sbjct: 212 --DLPLSLESIVAGNNILE--ELPELQNLPFLTTIYADNNLLK-TLPDLPPSLEALN--- 263
Query: 167 LNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPV 226
+ N L+ +LP + SL+ L+ + + L E NL +YLN S+N+ R
Sbjct: 264 VRDNYLT-DLPELPQSLTFLDVSENIFSGL----SELPPNL---YYLNASSNEIR-SLC- 313
Query: 227 ELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCID 286
+ L EL++S+N L E+P LE +L S N+L+ + L +
Sbjct: 314 --DLPPSLEELNVSNNKLI-ELPALPPRLE---RLIASFNHLAEVPEL----PQNLKQLH 363
Query: 287 ISYNEL 292
+ YN L
Sbjct: 364 VEYNPL 369
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A Length = 454 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 2e-31
Identities = 61/268 (22%), Positives = 102/268 (38%), Gaps = 39/268 (14%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N L P + N L +Y +N L ++P +L L + +N L +P +
Sbjct: 225 NILE--ELPELQNLPFLTTIYADNNLLK-TLPDLPPSL---EALNVRDNYL-TDLPELPQ 277
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
+L L+ + L+ PNL +L+ S N I S L LN S
Sbjct: 278 SLTFLDVSENIFSGLSELP-------PNLYYLNASSNE----IRSLCDLPPSLEELNVSN 326
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N + +P +L +L S N + E+P NLK L+ + N L P +
Sbjct: 327 NKLI-ELPALPPRL---ERLIASFNHLA-EVPELPQNLKQLH---VEYNPLR-EFPDIPE 377
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
S+ +L + L+ +PE NL L++ N +EFP E + +L ++
Sbjct: 378 SVEDLRMN----SHLA-EVPELPQNL---KQLHVETNPL-REFPDIPE---SVEDLRMNS 425
Query: 242 NFLGGEIPPQICNLESLEKLNVSHNNLS 269
+ + LE H++
Sbjct: 426 ERVVDPYEFAHETTDKLEDDVFEHHHHH 453
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 5e-36
Identities = 73/304 (24%), Positives = 117/304 (38%), Gaps = 24/304 (7%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPR-S 59
N + +F +L+ L L N +S PG NL L L + +N+L IP
Sbjct: 41 KNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL-KLIPLGV 99
Query: 60 LRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNN--------FYGEIWSSWGKC 111
L++L ++ + +N + + +F NL L++ N+ F G
Sbjct: 100 FTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSG--------L 151
Query: 112 QQLGTLNFSMNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGN 170
L L N+T SIP E L+ L L I L L L ++
Sbjct: 152 NSLEQLTLEKCNLT-SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHW 210
Query: 171 KLSGNLPRVLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQFRKEFPVELE 229
+ L L ++ L+ ++P + +L+ + +LNLS N L
Sbjct: 211 PYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLH 269
Query: 230 KLVQLSELDLSHNFLGGEIPPQI-CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDIS 288
+L++L E+ L L + P L L LNVS N L+ L S F + L + +
Sbjct: 270 ELLRLQEIQLVGGQLA-VVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILD 328
Query: 289 YNEL 292
N L
Sbjct: 329 SNPL 332
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 3e-34
Identities = 66/289 (22%), Positives = 103/289 (35%), Gaps = 32/289 (11%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
A+P + T + L L N + E + L LE++ N + P + NL +L
Sbjct: 25 AVPEGI--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNL 82
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITG 126
+ L N L VF NLT LDIS N I
Sbjct: 83 RTLGLRSNRLKLIPLGVFTGLSNLTKLDISENK------------------------IV- 117
Query: 127 SIPPEI-GKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYLVLNGNKLSGNLPRVLGSLS 184
+ + LY L L+ N +V I L SL L L L+ L L
Sbjct: 118 ILLDYMFQDLYNLKSLEVGDNDLV-YISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLH 176
Query: 185 ELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFL 244
L L L ++ + L ++ L +S+ + + L+ L ++H L
Sbjct: 177 GLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNL 236
Query: 245 GGEIPPQIC-NLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
+P +L L LN+S+N +S + S + L I + +L
Sbjct: 237 T-AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQL 284
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 7e-32
Identities = 65/273 (23%), Positives = 107/273 (39%), Gaps = 10/273 (3%)
Query: 2 NHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEI-GNLMQLTNLEIDNNQLFGQIPRS 59
N +S A+ P N NL+ L L SN L +P + L LT L+I N++ +
Sbjct: 66 NIVS-AVEPGAFNNLFNLRTLGLRSNRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYM 123
Query: 60 LRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSW-GKCQQLGTLN 118
++L +L + + N L F +L L + N I + L L
Sbjct: 124 FQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNL-TSIPTEALSHLHGLIVLR 182
Query: 119 FSMNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLP 177
NI +I +LY+L L+ S + + +L L + L+
Sbjct: 183 LRHLNIN-AIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPY 241
Query: 178 RVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSEL 237
+ L L +L+LS N +S L LL++ + L Q P L L L
Sbjct: 242 LAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVL 301
Query: 238 DLSHNFLGGEIPPQIC-NLESLEKLNVSHNNLS 269
++S N L + + ++ +LE L + N L+
Sbjct: 302 NVSGNQLT-TLEESVFHSVGNLETLILDSNPLA 333
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} Length = 477 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 1e-25
Identities = 42/188 (22%), Positives = 75/188 (39%), Gaps = 6/188 (3%)
Query: 116 TLNFSMNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYLVLNGNKLS 173
L+ N I ++ + L +L+ + N + + NL +L L L N+L
Sbjct: 36 LLDLGKNRIK-TLNQDEFASFPHLEELELNENIV-SAVEPGAFNNLFNLRTLGLRSNRLK 93
Query: 174 GNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQ 233
V LS L LD+S NK+ + +L + L + +N L
Sbjct: 94 LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNS 153
Query: 234 LSELDLSHNFLGGEIPPQI-CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
L +L L L IP + +L L L + H N++ + F+ ++ L ++IS+
Sbjct: 154 LEQLTLEKCNLT-SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPY 212
Query: 293 LGLIPNST 300
L + +
Sbjct: 213 LDTMTPNC 220
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 3e-35
Identities = 66/293 (22%), Positives = 113/293 (38%), Gaps = 22/293 (7%)
Query: 2 NHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
+ I ++ LY+ N++ P N+ LT L ++ N L +PR +
Sbjct: 85 LQIE-EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDL-SSLPRGI 142
Query: 61 -RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNF 119
N L + + N+L + F +L L +S N + L N
Sbjct: 143 FHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRL-THV--DLSLIPSLFHANV 199
Query: 120 SMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRV 179
S N ++ + + +LD S N I + L L L N L+ +
Sbjct: 200 SYNLLS-----TLAIPIAVEELDASHNSINV---VRGPVNVELTILKLQHNNLT-DTA-W 249
Query: 180 LGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDL 239
L + L +DLS N+L + + ++ L +SNN+ + + + L LDL
Sbjct: 250 LLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDL 308
Query: 240 SHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
SHN L + + LE L + HN++ L S H L + +S+N+
Sbjct: 309 SHNHL-LHVERNQPQFDRLENLYLDHNSIVTLKLSTH---HTLKNLTLSHNDW 357
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 1e-33
Identities = 62/292 (21%), Positives = 121/292 (41%), Gaps = 18/292 (6%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQ 73
N K + ++++ + + Q+ L +++ Q+ + ++ ++++
Sbjct: 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGF 108
Query: 74 NHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEI- 132
N + VF P LT L + N+ + +L TL+ S NN+ I +
Sbjct: 109 NAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTF 167
Query: 133 GKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLS 192
L L S N++ ++L + SL + ++ N LS L +E LD S
Sbjct: 168 QATTSLQNLQLSSNRLTH---VDLSLIPSLFHANVSYNLLS-----TLAIPIAVEELDAS 219
Query: 193 TNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQI 252
N ++ + +++ L L +N + L L E+DLS+N L +I
Sbjct: 220 HNSIN-VVRG--PVNVELTILKLQHNNLT-DTAW-LLNYPGLVEVDLSYNEL-EKIMYHP 273
Query: 253 C-NLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQ 303
++ LE+L +S+N L + + + L +D+S+N LL + N F
Sbjct: 274 FVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLHVERNQPQFD 324
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 5e-27
Identities = 50/275 (18%), Positives = 96/275 (34%), Gaps = 32/275 (11%)
Query: 42 LTNLEIDNNQLFGQIPRSLR-----NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDIS 96
+ + + Q L + V + + + + + + + L+++
Sbjct: 24 QYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLN 83
Query: 97 HNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIE 155
++ + L N I +PP + + L L N + +P
Sbjct: 84 DLQIEEIDTYAFAYAHTIQKLYMGFNAIR-YLPPHVFQNVPLLTVLVLERNDLS-SLPRG 141
Query: 156 L-GNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIP------------- 201
+ N L L ++ N L + + L+ L LS+N+L+ +
Sbjct: 142 IFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT-HVDLSLIPSLFHANVS 200
Query: 202 ----ETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLES 257
TL + V L+ S+N V V+L+ L L HN L + N
Sbjct: 201 YNLLSTLAIPIAVEELDASHNSINV---VRGPVNVELTILKLQHNNL--TDTAWLLNYPG 255
Query: 258 LEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
L ++++S+N L ++ F M L + IS N L
Sbjct: 256 LVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRL 290
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 94.6 bits (235), Expect = 2e-20
Identities = 57/321 (17%), Positives = 112/321 (34%), Gaps = 30/321 (9%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N L+ + +L + N LS + + + L+ +N + + +
Sbjct: 181 NRLT-HVDL--SLIPSLFHANVSYNLLS-----TLAIPIAVEELDASHNSI-NVVRGPV- 230
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
L + L+ N+LT + + YP L +D+S+N ++ + K Q+L L S
Sbjct: 231 -NVELTILKLQHNNLT-DTA-WLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISN 287
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N + ++ + L LD S N ++ + L L L+ N + L L
Sbjct: 288 NRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV-TLK--LS 342
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
+ L+ L LS N + L V + + + +LE + E D +
Sbjct: 343 THHTLKNLTLSHNDWDCNSLRAL--FRNVARPAVDDADQHCKIDYQLEHGLCCKESDKPY 400
Query: 242 NF----------LGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNE 291
+ ++ + + +N + + + G ++ NE
Sbjct: 401 LDRLLQYIALTSVVEKVQRAQGRCSATDTINSVQSLSHYITQQGGVPLQGNEQLEAEVNE 460
Query: 292 LLGLIPNSTGFQYDPIQALRG 312
L + T Q Q L+G
Sbjct: 461 LRAEVQQLTNEQIQQEQLLQG 481
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} Length = 597 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 3e-07
Identities = 13/110 (11%), Positives = 36/110 (32%), Gaps = 2/110 (1%)
Query: 184 SELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNF 243
+ Y I L + +++ F E L + ++
Sbjct: 3 GQQRYNVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNST 62
Query: 244 LGGEIPPQI-CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
+ ++P + + +E LN++ + + F H + + + +N +
Sbjct: 63 M-RKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAI 111
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 5e-35
Identities = 64/274 (23%), Positives = 105/274 (38%), Gaps = 14/274 (5%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
+++ I TN+ L S ++ +LE+ N + L
Sbjct: 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFS--YNFGWQHLELVNCKFGQFPTLKL 324
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHN--NFYGEIWSSWGKCQQLGTLN 118
++L L N SEV P+L FLD+S N +F G S L L+
Sbjct: 325 KSLKRLT---FTSNKGGNAFSEVD--LPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLD 379
Query: 119 FSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYLVLNGNKLSGNLP 177
S N + ++ L QL LDF + + +L++L YL ++
Sbjct: 380 LSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFN 438
Query: 178 RVLGSLSELEYLDLSTNKLSGSI-PETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSE 236
+ LS LE L ++ N + P+ L + +L+LS Q + P L L
Sbjct: 439 GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQV 498
Query: 237 LDLSHNFLGGEIPPQI-CNLESLEKLNVSHNNLS 269
L+++ N L +P I L SL+K+ + N
Sbjct: 499 LNMASNQL-KSVPDGIFDRLTSLQKIWLHTNPWD 531
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 2e-34
Identities = 67/331 (20%), Positives = 114/331 (34%), Gaps = 35/331 (10%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVP-GEIGNLMQLTNLEI------DNNQLF 53
+N ++ I P L L L +N S +V I L L + + L
Sbjct: 186 LNPMNF-IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLE 244
Query: 54 GQIPRSLRNLASLNRVHLEQNHLTG---NISEVFGIYPNLTFLDISHNNFYG-EIWSSWG 109
+L L +L +L +I ++F N++ + + +S
Sbjct: 245 KFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNF 304
Query: 110 KCQQLGTLNFSMNNITGSIPPEIGKLY----------------QLHKLDFSLNQI--VGE 151
Q L +N + +L L LD S N + G
Sbjct: 305 GWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGC 364
Query: 152 IPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPE--TLGNLLK 209
SL YL L+ N + + L +LE+LD + L + E +L
Sbjct: 365 CSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRN 422
Query: 210 VHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQI-CNLESLEKLNVSHNNL 268
+ YL++S+ R F L L L ++ N P I L +L L++S L
Sbjct: 423 LIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 482
Query: 269 SGLIPSCFEGMHGLSCIDISYNELLGLIPNS 299
L P+ F + L ++++ N+L +
Sbjct: 483 EQLSPTAFNSLSSLQVLNMASNQLKSVPDGI 513
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 5e-31
Identities = 56/312 (17%), Positives = 103/312 (33%), Gaps = 21/312 (6%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
N L S +F L+ L L + G +L L+ L + N + +
Sbjct: 37 FNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAF 96
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNF-YGEIWSSWGKCQQLGTLNF 119
L+SL ++ + +L + G L L+++HN ++ + L L+
Sbjct: 97 SGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDL 156
Query: 120 SMNNITGSIPPEIGKLYQLH----KLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175
S N I ++ L+Q+ LD SLN + I L+ L L N S N
Sbjct: 157 SSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPM-NFIQPGAFKEIRLHKLTLRNNFDSLN 215
Query: 176 LPR-VLGSLSELEYLDL------STNKLSGSIPETLGNL--LKVHYLNLS-NNQFRKEFP 225
+ + + L+ LE L + L L L L + L+ + + +
Sbjct: 216 VMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDII 275
Query: 226 VELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCI 285
L +S L + + N + L + + + L +
Sbjct: 276 DLFNCLTNVSSFSLVSVTI-ERVKDFSYNF-GWQHLELVNCKFGQF---PTLKLKSLKRL 330
Query: 286 DISYNELLGLIP 297
+ N+
Sbjct: 331 TFTSNKGGNAFS 342
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 3e-30
Identities = 58/317 (18%), Positives = 103/317 (32%), Gaps = 28/317 (8%)
Query: 2 NHLSGAIPPSVGNFTNLKG----LYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIP 57
N + + + L L N ++ + ++L L + NN +
Sbjct: 159 NKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLHKLTLRNNFDSLNVM 217
Query: 58 R-SLRNLASLNRVHLEQNHLTG--NISEV-FGIYPNLTFLDISHNN------FYGEIWSS 107
+ ++ LA L L N+ + L L I + +I
Sbjct: 218 KTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDL 277
Query: 108 WGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVL 167
+ + + + I + + L+ + ++L +LK L
Sbjct: 278 FNCLTNVSSFSLVSVTIE-RVKDFSY-NFGWQHLELVNCKFGQFPTLKLKSLKRLT---F 332
Query: 168 NGNKLSGNLPRVLGSLSELEYLDLSTNKLS--GSIPETLGNLLKVHYLNLSNNQFRKEFP 225
NK V L LE+LDLS N LS G ++ + YL+LS N
Sbjct: 333 TSNKGGNAFSEV--DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMS 389
Query: 226 VELEKLVQLSELDLSHNFLGGEIPPQI--CNLESLEKLNVSHNNLSGLIPSCFEGMHGLS 283
L QL LD H+ L ++ +L +L L++SH + F G+ L
Sbjct: 390 SNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLE 448
Query: 284 CIDISYNELLGLIPNST 300
+ ++ N
Sbjct: 449 VLKMAGNSFQENFLPDI 465
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 4e-29
Identities = 61/309 (19%), Positives = 109/309 (35%), Gaps = 19/309 (6%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
IP ++ + K L L N L + +L L++ ++ + ++L+ L
Sbjct: 21 KIPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHL 78
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNIT- 125
+ + L N + F +L L N G + L LN + N I
Sbjct: 79 STLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS 138
Query: 126 GSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNY----LVLNGNKLSGNLPRVLG 181
+P L L LD S N+I +L L + L L+ N ++ P
Sbjct: 139 FKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK 198
Query: 182 SLSELEYLDLSTNKLSGSIPET-LGNLLKVHYLNLSNNQFRKEFPVE------LEKLVQL 234
+ L L L N S ++ +T + L + L +FR E +E LE L L
Sbjct: 199 EIR-LHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNL 257
Query: 235 SELDLSHNFL---GGEIPPQICNLESLEKLNVSHNNLSGLIP-SCFEGMHGLSCIDISYN 290
+ + +L +I L ++ ++ + + S G L ++ +
Sbjct: 258 TIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFG 317
Query: 291 ELLGLIPNS 299
+ L S
Sbjct: 318 QFPTLKLKS 326
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 2e-25
Identities = 39/189 (20%), Positives = 68/189 (35%), Gaps = 8/189 (4%)
Query: 116 TLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175
T N IP + LD S N + + L L L+ ++
Sbjct: 11 TYQCMELNFY-KIPDNLPF--STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTI 67
Query: 176 LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLS 235
SLS L L L+ N + L + L + L L
Sbjct: 68 EDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLK 127
Query: 236 ELDLSHNFLG-GEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSC----IDISYN 290
EL+++HN + ++P NL +LE L++S N + + + +H + +D+S N
Sbjct: 128 ELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187
Query: 291 ELLGLIPNS 299
+ + P +
Sbjct: 188 PMNFIQPGA 196
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} Length = 570 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 3e-05
Identities = 19/83 (22%), Positives = 27/83 (32%), Gaps = 1/83 (1%)
Query: 2 NHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
N P + NL L L L P +L L L + +NQL
Sbjct: 455 NSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIF 514
Query: 61 RNLASLNRVHLEQNHLTGNISEV 83
L SL ++ L N + +
Sbjct: 515 DRLTSLQKIWLHTNPWDCSCPRI 537
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 9e-35
Identities = 66/271 (24%), Positives = 116/271 (42%), Gaps = 13/271 (4%)
Query: 402 KNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
NF E+ IG G + VYR L G VA+KK L + + + + EI L ++ H
Sbjct: 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH 91
Query: 461 RNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKE-FSWIVRTNVIKSVANALSY 519
N++K+Y +V E + G L+ ++ + K + +AL +
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 520 MHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELA 579
MH ++HRDI NV +++ ++ D G+ +F ++ GT Y++PE
Sbjct: 152 MHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI 208
Query: 580 YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639
+ K D++S G L E+ + P F + +L PLPS +
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSP--F---YGDKMNLYSLCKKIEQCDYPPLPSDHY 263
Query: 640 QDKLISILEVALLCLEESPESRPTMQTVCQL 670
++L ++ +C+ PE RP + V +
Sbjct: 264 SEELRQLVN---MCINPDPEKRPDVTYVYDV 291
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 3e-34
Identities = 66/274 (24%), Positives = 113/274 (41%), Gaps = 32/274 (11%)
Query: 407 EQCIGIGGQASVYRGELPSGEV-VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVK 465
+ IG G V+ G L + VAVK L + ++ +FL E + L + H NIV+
Sbjct: 119 GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPD--LKAKFLQEARILKQYSHPNIVR 176
Query: 466 FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF 525
G C+ + ++V E ++ G L +G ++ A + Y+ C
Sbjct: 177 LIGVCTQKQPIYIVMELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGY--VAPELAYTMK 583
+HRD++++N L++ + ++SDFG+++ G + APE +
Sbjct: 235 ---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 584 VTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDP-----RLPLPSR 637
+ + DV+SFG+L E G P NLS + + RLP P
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPYP------------NLSNQQTREFVEKGGRLPCP-E 338
Query: 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
D + ++ C P RP+ T+ Q L
Sbjct: 339 LCPDAVFRLM---EQCWAYEPGQRPSFSTIYQEL 369
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 132 bits (333), Expect = 4e-34
Identities = 64/282 (22%), Positives = 108/282 (38%), Gaps = 29/282 (10%)
Query: 1 MNHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRS 59
N ++ I N NL L L +N +S PG L++L L + NQL ++P
Sbjct: 61 NNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQL-KELPEK 118
Query: 60 LRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSW------GKCQQ 113
+ +L + + +N +T VF + +++ N + SS ++
Sbjct: 119 M--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNP----LKSSGIENGAFQGMKK 172
Query: 114 LGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYLVLNGNKL 172
L + + NIT +IP G L +L N+I ++ L L +L L L+ N +
Sbjct: 173 LSYIRIADTNIT-TIPQ--GLPPSLTELHLDGNKI-TKVDAASLKGLNNLAKLGLSFNSI 228
Query: 173 SGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRK------EFPV 226
S L + L L L+ NKL +P L + + + L NN P
Sbjct: 229 SAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG 287
Query: 227 ELEKLVQLSELDLSHNFLG-GEIPPQI-CNLESLEKLNVSHN 266
K S + L N + EI P + + + +
Sbjct: 288 YNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 1e-32
Identities = 60/295 (20%), Positives = 110/295 (37%), Gaps = 21/295 (7%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
+P + + L L +N ++ G+ NL L L + NN++ P + L L
Sbjct: 45 KVPKDL--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 102
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNIT- 125
R++L +N L ++ L L + N S + Q+ + N +
Sbjct: 103 ERLYLSKNQLKELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS 159
Query: 126 GSIPPEI-GKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLS 184
I + +L + + I I G SL L L+GNK++ L L+
Sbjct: 160 SGIENGAFQGMKKLSYIRIADTNITT---IPQGLPPSLTELHLDGNKITKVDAASLKGLN 216
Query: 185 ELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFL 244
L L LS N +S +L N + L+L+NN+ + P L + + L +N +
Sbjct: 217 NLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL-VKVPGGLADHKYIQVVYLHNNNI 275
Query: 245 GGEIPPQ-------ICNLESLEKLNVSHNNL--SGLIPSCFEGMHGLSCIDISYN 290
I S +++ N + + PS F ++ + + +
Sbjct: 276 -SAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 1e-25
Identities = 53/233 (22%), Positives = 97/233 (41%), Gaps = 17/233 (7%)
Query: 65 SLNRVHLEQNHLTGNISEV-FGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNN 123
L V L +V + P+ LD+ +N + + L TL N
Sbjct: 32 HLRVVQCSDLGLE----KVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNK 87
Query: 124 ITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGS 182
I+ I P L +L +L S NQ+ E+P ++ K+L L ++ N+++ V
Sbjct: 88 IS-KISPGAFAPLVKLERLYLSKNQLK-ELPEKM--PKTLQELRVHENEITKVRKSVFNG 143
Query: 183 LSELEYLDLSTNKLSGSI--PETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLS 240
L+++ ++L TN L S + K+ Y+ +++ P L L+EL L
Sbjct: 144 LNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGL--PPSLTELHLD 200
Query: 241 HNFLGGEIPPQI-CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
N + ++ L +L KL +S N++S + L + ++ N+L
Sbjct: 201 GNKIT-KVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKL 252
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 97.8 bits (244), Expect = 2e-22
Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 14/189 (7%)
Query: 116 TLNFSMNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSG 174
L+ N IT I L LH L N+I P L L L L+ N+L
Sbjct: 56 LLDLQNNKIT-EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK- 113
Query: 175 NLPRVLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQFRKEFPVE---LEK 230
LP L+ L + N+++ + + L ++ + L N K +E +
Sbjct: 114 ELPE--KMPKTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGTNPL-KSSGIENGAFQG 169
Query: 231 LVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYN 290
+ +LS + ++ + IP + SL +L++ N ++ + + +G++ L+ + +S+N
Sbjct: 170 MKKLSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFN 226
Query: 291 ELLGLIPNS 299
+ + S
Sbjct: 227 SISAVDNGS 235
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* Length = 330 | Back alignment and structure |
|---|
Score = 87.0 bits (216), Expect = 1e-18
Identities = 34/225 (15%), Positives = 68/225 (30%), Gaps = 35/225 (15%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQI--PRS 59
N L +P + L+ L ++ N ++ L Q+ +E+ N L +
Sbjct: 110 NQLK-ELPEKM--PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGA 166
Query: 60 LRNLASLNRVHLEQNHLTG-----------------NISEV----FGIYPNLTFLDISHN 98
+ + L+ + + ++T I++V NL L +S N
Sbjct: 167 FQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFN 226
Query: 99 NFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQI------VGEI 152
+ S L L+ + N + +P + + + N I
Sbjct: 227 SISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCP 285
Query: 153 PIELGNLKSLNYLVLNGNKLSGNL--PRVLGSLSELEYLDLSTNK 195
P S + + L N + P + + L K
Sbjct: 286 PGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 130 bits (329), Expect = 7e-34
Identities = 59/300 (19%), Positives = 125/300 (41%), Gaps = 51/300 (17%)
Query: 399 RATKNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQRE-FLNEIKALT 456
R +F+ QC+G GG V+ + A+K+ + L + RE + E+KAL
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKR---IRLPNRELAREKVMREVKALA 58
Query: 457 EIRHRNIVKFYGFC------------SHPRHSFLVYECLERGSLAEILSNDGSIKEFSWI 504
++ H IV+++ S + ++ + + +L + ++ +I+E
Sbjct: 59 KLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERS 118
Query: 505 VRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK------ 558
V ++ +A A+ ++H ++HRD+ N+ + + +V DFG+ +
Sbjct: 119 VCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 559 ------PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISL 612
P + T GT Y++PE + + K D++S G++ E++ +P F
Sbjct: 176 TVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YP--F--- 227
Query: 613 LSSSSSNMNLSLNEILDPRLP-LPSRNIQD--KLISILEVALLCLEESPESRPTMQTVCQ 669
S+ +L ++ + + P L ++ ++ L SP RP + +
Sbjct: 228 --STQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQ------DMLSPSPMERPEAINIIE 279
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 1e-33
Identities = 65/291 (22%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
+ + + IG GG + V++ ++ A+K + ++ + NEI L +++
Sbjct: 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-YRNEIAYLNKLQQH 86
Query: 462 N--IVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSY 519
+ I++ Y + ++ ++V EC L L SI W + + K++ A+
Sbjct: 87 SDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDP--WERK-SYWKNMLEAVHT 142
Query: 520 MH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW--TEFAGTFGYVAP 576
+H H IVH D+ N L+ ++ DFGIA ++P +++ GT Y+ P
Sbjct: 143 IHQHG----IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 197
Query: 577 EL-----------AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625
E K++ K DV+S G + + GK P F N L+
Sbjct: 198 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP--F-----QQIINQISKLH 250
Query: 626 EILDPRLPLP-----SRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
I+DP + +++QD ++ CL+ P+ R ++ +LL
Sbjct: 251 AIIDPNHEIEFPDIPEKDLQD-VLK------CCLKRDPKQRISIP---ELL 291
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 130 bits (328), Expect = 1e-33
Identities = 61/294 (20%), Positives = 109/294 (37%), Gaps = 41/294 (13%)
Query: 402 KNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
K++ Q +G GG + V E L G A+K+ +L E + E E H
Sbjct: 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKR---ILCHEQQDREEAQREADMHRLFNH 85
Query: 461 RNIVKFYGFCSHPRHS----FLVYECLERGSLAEIL----SNDGSIKEFSWIVRTNVIKS 512
NI++ +C R + +L+ +RG+L + + E I+ ++
Sbjct: 86 PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQ-ILW--LLLG 142
Query: 513 VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN--------- 563
+ L +H HRD+ N+LL E + + D G
Sbjct: 143 ICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQD 199
Query: 564 WTEFAGTFGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN 619
W T Y APEL ++ + + E+ DV+S G + ++ G+ P + + S
Sbjct: 200 WAAQRCTISYRAPELFSVQSHCV-IDERTDVWSLGCVLYAMMFGEGP--YDMVFQKGDSV 256
Query: 620 MNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673
N++ P+ P S + L++ + P RP + + L
Sbjct: 257 ALAVQNQLSIPQSPRHSSALWQ-LLNS------MMTVDPHQRPHIPLLLSQLEA 303
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 134 bits (338), Expect = 2e-33
Identities = 56/346 (16%), Positives = 126/346 (36%), Gaps = 47/346 (13%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
+ +IP + +K L L N ++ G++ L L + ++++ +
Sbjct: 15 RSFT-SIPSGL--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFY 71
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSW-GKCQQLGTLNFS 120
+L SL + L NHL+ S FG +L +L++ N + +S L TL
Sbjct: 72 SLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIG 131
Query: 121 MNNITGSIPPE-IGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRV 179
I L L++L+ + L +++ +++L L+ ++ + L
Sbjct: 132 NVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIF 191
Query: 180 LGSLSELEYLDLSTNKLSG----------------------------------SIPETLG 205
LS + YL+L L+ + +
Sbjct: 192 ADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYIL 251
Query: 206 NLLKVHYLNLSNNQFRKEFPVELE--------KLVQLSELDLSHNFLGGEIPPQICNLES 257
L +V + + + N P E + + V + L + +L ++ LE
Sbjct: 252 ELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEK 311
Query: 258 LEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQ 303
++++ V ++ + + S + + L +D+S N ++ ++ +
Sbjct: 312 VKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACK 357
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 3e-33
Identities = 65/319 (20%), Positives = 107/319 (33%), Gaps = 31/319 (9%)
Query: 2 NHLSGAIPPSV-GNFTNLKGLYLYSNSLSG-SVPGEIGNLMQLTNLEIDNNQLFGQIPR- 58
NHLS ++ S G ++LK L L N V NL L L I N + F +I R
Sbjct: 84 NHLS-SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRI 142
Query: 59 SLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLN 118
L SLN + ++ L S+ ++ L + + + + L
Sbjct: 143 DFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLE 202
Query: 119 FSMNNITG---SIPPEIGKLYQLHKLDFSLNQIVG-----------------EIPIELGN 158
N+ S P + KL F + + E+ +
Sbjct: 203 LRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCT 262
Query: 159 LKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNN 218
L L + + + L +V + L + L + L KV + + N+
Sbjct: 263 LNGLGDFNPSESDVVSELGKV--ETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENS 320
Query: 219 QFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQ---ICNLESLEKLNVSHNNLSGL--IP 273
+ + L L LDLS N + E SL+ L +S N+L +
Sbjct: 321 KVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTG 380
Query: 274 SCFEGMHGLSCIDISYNEL 292
+ L+ +DIS N
Sbjct: 381 EILLTLKNLTSLDISRNTF 399
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 1e-31
Identities = 56/283 (19%), Positives = 109/283 (38%), Gaps = 18/283 (6%)
Query: 13 GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLE 72
+F L L Y LS V + L L + + + ++ + ++ R+H+
Sbjct: 238 ESFNELLKLLRYILELS-EVEFDDCTLNGLGDFNPSESDVVSELGK--VETVTIRRLHIP 294
Query: 73 QNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPE- 131
Q +L ++S V+ + + + + ++ + S + L L+ S N +
Sbjct: 295 QFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNS 354
Query: 132 --IGKLYQLHKLDFSLNQI--VGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELE 187
G L L S N + + + L LK+L L ++ N +P ++
Sbjct: 355 ACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMR 413
Query: 188 YLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGE 247
+L+LS+ + + + L++SNN F + L +L EL +S N L +
Sbjct: 414 FLNLSSTGIR-VVKT--CIPQTLEVLDVSNNNL-DSFSLFLP---RLQELYISRNKL--K 464
Query: 248 IPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYN 290
P L + +S N L + F+ + L I + N
Sbjct: 465 TLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTN 507
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 7e-27
Identities = 56/238 (23%), Positives = 87/238 (36%), Gaps = 19/238 (7%)
Query: 38 NLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISH 97
+ + L I LF + L + R+ +E + + +L FLD+S
Sbjct: 284 ETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSE 343
Query: 98 NNFYGEI---WSSWGKCQQLGTLNFSMNNITGSIPPEIG---KLYQLHKLDFSLNQIVGE 151
N E + G L TL S N++ S+ L L LD S N
Sbjct: 344 NLMVEEYLKNSACKGAWPSLQTLVLSQNHLR-SMQKTGEILLTLKNLTSLDISRNTF-HP 401
Query: 152 IPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVH 211
+P + + +L L+ + + LE LD+S N L S L L
Sbjct: 402 MPDSCQWPEKMRFLNLSSTGIR-VVKT--CIPQTLEVLDVSNNNLD-SFSLFLPRL---Q 454
Query: 212 YLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQI-CNLESLEKLNVSHNNL 268
L +S N+ K P + L + +S N L +P I L SL+K+ + N
Sbjct: 455 ELYISRNKL-KTLP-DASLFPVLLVMKISRNQLK-SVPDGIFDRLTSLQKIWLHTNPW 509
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 6e-24
Identities = 49/224 (21%), Positives = 81/224 (36%), Gaps = 15/224 (6%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQL---FGQIPR 58
+L + +K + + ++ + +L L L++ N + + +
Sbjct: 296 FYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSA 355
Query: 59 SLRNLASLNRVHLEQNHLT--GNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGT 116
SL + L QNHL E+ NLT LDIS N F + S +++
Sbjct: 356 CKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTF-HPMPDSCQWPEKMRF 414
Query: 117 LNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNL 176
LN S I + I L LD S N + + L L+ L ++ NKL L
Sbjct: 415 LNLSSTGIR-VVKTCI--PQTLEVLDVSNNNL-DSFSLFLPRLQELY---ISRNKLK-TL 466
Query: 177 PRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQF 220
P L + +S N+L L + + L N +
Sbjct: 467 PD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPW 509
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 1e-23
Identities = 43/255 (16%), Positives = 85/255 (33%), Gaps = 7/255 (2%)
Query: 41 QLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNF 100
+ + IP L A++ + L N +T NL L + +
Sbjct: 6 ASGVCDGRSRSFT-SIPSGL--TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRI 62
Query: 101 YGEIWSSWGKCQQLGTLNFSMNNITGSIPPE-IGKLYQLHKLDFSLNQIVG-EIPIELGN 158
++ L L+ S N+++ S+ G L L L+ N + N
Sbjct: 63 NTIEGDAFYSLGSLEHLDLSDNHLS-SLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPN 121
Query: 159 LKSLNYLVLNGNKLSGNLPR-VLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSN 217
L +L L + + + R L+ L L++ L ++L ++ +H+L L
Sbjct: 122 LTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHL 181
Query: 218 NQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFE 277
++ + + L + L+L L + E + S L F
Sbjct: 182 SESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFN 241
Query: 278 GMHGLSCIDISYNEL 292
+ L + +E+
Sbjct: 242 ELLKLLRYILELSEV 256
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 87.5 bits (217), Expect = 3e-18
Identities = 35/191 (18%), Positives = 67/191 (35%), Gaps = 29/191 (15%)
Query: 111 CQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGN 170
C G + + T SIP + ++ L L+ N
Sbjct: 4 CDASGVCDGRSRSFT-SIPSGL--------------------------TAAMKSLDLSFN 36
Query: 171 KLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEK 230
K++ L + + L+ L L +++++ + +L + +L+LS+N
Sbjct: 37 KITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGP 96
Query: 231 LVQLSELDLSHNFLGG-EIPPQICNLESLEKLNVSHNNLSGLIP-SCFEGMHGLSCIDIS 288
L L L+L N + NL +L+ L + + I F G+ L+ ++I
Sbjct: 97 LSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIK 156
Query: 289 YNELLGLIPNS 299
L S
Sbjct: 157 ALSLRNYQSQS 167
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* Length = 549 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 9e-07
Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 9/100 (9%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
+ + L+ L + +N+L S L +L L I N+L +P +
Sbjct: 420 TGIR-VVKT--CIPQTLEVLDVSNNNLD-SFSL---FLPRLQELYISRNKL-KTLPDAS- 470
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFY 101
L + + +N L +F +L + + N +
Sbjct: 471 LFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 510
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 3e-33
Identities = 73/324 (22%), Positives = 120/324 (37%), Gaps = 30/324 (9%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQI-PRSL 60
+L+ +P + L L N + L QL LE+ + I +
Sbjct: 14 CNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAF 69
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSS--WGKCQQLGTLN 118
RNL +L + L + + + F +L L + + + + L L+
Sbjct: 70 RNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLD 129
Query: 119 FSMNNITG-SIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNL--KSLNYLVLNGNKLSGN 175
S N I + P GKL L +DFS NQI EL L K+L++ L N L
Sbjct: 130 LSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSR 189
Query: 176 LPRVLGSLSE------LEYLDLSTNKLSGSIPETLGNLL------------KVHYLNLSN 217
+ G LE LD+S N + I N + +
Sbjct: 190 VSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGF 249
Query: 218 NQFRKEFPVELEKLVQLS--ELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSC 275
+ + L + S LDLSH F+ L+ L+ LN+++N ++ +
Sbjct: 250 HNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEA 309
Query: 276 FEGMHGLSCIDISYNELLGLIPNS 299
F G+ L +++SYN L L ++
Sbjct: 310 FYGLDNLQVLNLSYNLLGELYSSN 333
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 133 bits (335), Expect = 2e-32
Identities = 73/346 (21%), Positives = 109/346 (31%), Gaps = 53/346 (15%)
Query: 2 NHLSGAIPPS--VGNFTNLKGLYLYSNSLSG-SVPGEIGNLMQLTNLEIDNNQLFGQIPR 58
LS A+ N L L L N + + G L L +++ +NQ+F
Sbjct: 107 CGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEH 166
Query: 59 SLRNLA--SLNRVHLEQNHLTGNISEVFGIYPN------LTFLDISHNNFYGEI------ 104
L L +L+ L N L +S +G N L LD+S N + +I
Sbjct: 167 ELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSN 226
Query: 105 ------WSSWGKCQQLGTLNFSMNNITGSIPPEI---GKLYQLHKLDFSLNQIVGEIPIE 155
S + F +NI + LD S +
Sbjct: 227 AISKSQAFSLILAHHIMGAGFGFHNIK-DPDQNTFAGLARSSVRHLDLSHGFVFSLNSRV 285
Query: 156 LGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNL 215
LK L L L NK++ L L+ L+LS N L L KV Y++L
Sbjct: 286 FETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDL 345
Query: 216 SNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGL---- 271
N + L +L LDL N L I + S+ + +S N L L
Sbjct: 346 QKNHIAIIQDQTFKFLEKLQTLDLRDNALT-----TIHFIPSIPDIFLSGNKLVTLPKIN 400
Query: 272 -----------------IPSCFEGMHGLSCIDISYNELLGLIPNST 300
I + L + ++ N + T
Sbjct: 401 LTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQT 446
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 9e-27
Identities = 57/297 (19%), Positives = 98/297 (32%), Gaps = 41/297 (13%)
Query: 2 NHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
+ ++ V +LK L L N ++ L L L + N L +
Sbjct: 276 GFVF-SLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNF 334
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFS 120
L + + L++NH+ + F L LD+ N ++ + + S
Sbjct: 335 YGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNAL-----TTIHFIPSIPDIFLS 389
Query: 121 MNNITG---------------------SIPPEIGKLYQLHKLDFSLNQIVGEIPIE--LG 157
N + I + ++ L L + N+ +
Sbjct: 390 GNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRF-SSCSGDQTPS 448
Query: 158 NLKSLNYLVLNGNKL-----SGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHY 212
SL L L N L + V LS L+ L L+ N L+ P +L +
Sbjct: 449 ENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRG 508
Query: 213 LNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLS 269
L+L++N+ L LD+S N L P + SL L+++HN
Sbjct: 509 LSLNSNRLT-VLSHND-LPANLEILDISRNQL-LAPNPDV--FVSLSVLDITHNKFI 560
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 80.6 bits (199), Expect = 6e-16
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 5/130 (3%)
Query: 175 NLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVE-LEKLVQ 233
NL +V L+ E L LS N + + L ++ L L + E L
Sbjct: 15 NLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPN 74
Query: 234 LSELDLSHNFLGGEIPPQI-CNLESLEKLNVSHNNLS--GLIPSCFEGMHGLSCIDISYN 290
L LDL + + + P L L +L + LS L F + L+ +D+S N
Sbjct: 75 LRILDLGSSKIY-FLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKN 133
Query: 291 ELLGLIPNST 300
++ L + +
Sbjct: 134 QIRSLYLHPS 143
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} Length = 844 | Back alignment and structure |
|---|
Score = 76.0 bits (187), Expect = 2e-14
Identities = 25/118 (21%), Positives = 43/118 (36%), Gaps = 5/118 (4%)
Query: 187 EYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGG 246
L+ +P+ L L LS N R L QL L+L +
Sbjct: 7 RIAFYRFCNLT-QVPQVLNTT---ERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPL 62
Query: 247 EIPPQIC-NLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQ 303
I + NL +L L++ + + L P F+G+ L + + + L + F+
Sbjct: 63 TIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFR 120
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 128 bits (325), Expect = 4e-33
Identities = 60/277 (21%), Positives = 98/277 (35%), Gaps = 20/277 (7%)
Query: 1 MNHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRS 59
N +S + +L L L +N +S L +L L I N L +IP +
Sbjct: 63 NNDIS-ELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHL-VEIPPN 120
Query: 60 LRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFY-GEIWSSWGKCQQLGTLN 118
L +SL + + N + VF N+ +++ N +L L
Sbjct: 121 L--PSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLR 178
Query: 119 FSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYLVLNGNKLSGNLP 177
S +T IP ++ L++L N+I I +E L L L L N++
Sbjct: 179 ISEAKLT-GIPKDL--PETLNELHLDHNKIQ-AIELEDLLRYSKLYRLGLGHNQIRMIEN 234
Query: 178 RVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRK------EFPVELEKL 231
L L L L L NKLS +P L +L + + L N K K
Sbjct: 235 GSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKR 293
Query: 232 VQLSELDLSHNFLG-GEIPPQI-CNLESLEKLNVSHN 266
+ + L +N + E+ P + + +
Sbjct: 294 AYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 3e-31
Identities = 56/294 (19%), Positives = 107/294 (36%), Gaps = 20/294 (6%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
A+P + + L L +N +S + L L L + NN++ ++ L L
Sbjct: 47 AVPKEI--SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKL 104
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNIT- 125
++++ +NHL + +L L I N + + + + N +
Sbjct: 105 QKLYISKNHLVEIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLEN 161
Query: 126 GSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSE 185
P +L+ L S ++ IP +L ++LN L L+ NK+ L S+
Sbjct: 162 SGFEPGAFDGLKLNYLRISEAKLT-GIPKDL--PETLNELHLDHNKIQAIELEDLLRYSK 218
Query: 186 LEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLG 245
L L L N++ +L L + L+L NN+ P L L L + L N +
Sbjct: 219 LYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKL-SRVPAGLPDLKLLQVVYLHTNNI- 276
Query: 246 GEIPPQI-------CNLESLEKLNVSHNNLS--GLIPSCFEGMHGLSCIDISYN 290
++ +++ +N + + P+ F + I
Sbjct: 277 TKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 2e-25
Identities = 56/232 (24%), Positives = 91/232 (39%), Gaps = 16/232 (6%)
Query: 65 SLNRVHLEQNHLTGNISEV-FGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNN 123
L V L V I P+ T LD+ +N+ + Q L L N
Sbjct: 34 HLRVVQCSDLGLK----AVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNK 89
Query: 124 ITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGS 182
I+ I + L +L KL S N +V EIP L SL L ++ N++ V
Sbjct: 90 IS-KIHEKAFSPLRKLQKLYISKNHLV-EIPPNL--PSSLVELRIHDNRIRKVPKGVFSG 145
Query: 183 LSELEYLDLSTNKL-SGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
L + +++ N L + + LK++YL +S + P +L L+EL L H
Sbjct: 146 LRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLT-GIPKDL--PETLNELHLDH 202
Query: 242 NFLGGEIPPQI-CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
N + I + L +L + HN + + + L + + N+L
Sbjct: 203 NKIQ-AIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKL 253
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} Length = 332 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 1e-20
Identities = 47/231 (20%), Positives = 82/231 (35%), Gaps = 24/231 (10%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQI--PRS 59
NHL IPP++ ++L L ++ N + G L + +E+ N L P +
Sbjct: 112 NHLV-EIPPNL--PSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGA 168
Query: 60 LRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWS-SWGKCQQLGTLN 118
L LN + + + LTG ++ L L + HN I + +L L
Sbjct: 169 FDGL-KLNYLRISEAKLTGIPKDLP---ETLNELHLDHNKI-QAIELEDLLRYSKLYRLG 223
Query: 119 FSMNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLP 177
N I I L L +L N++ +P L +LK L + L+ N ++ +
Sbjct: 224 LGHNQIR-MIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNIT-KVG 280
Query: 178 -------RVLGSLSELEYLDLSTNKLSGSI--PETLGNLLKVHYLNLSNNQ 219
+ + L N + P T + + N +
Sbjct: 281 VNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 5e-33
Identities = 63/289 (21%), Positives = 120/289 (41%), Gaps = 45/289 (15%)
Query: 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH- 460
+ + + IG GG + V++ ++ A+K + ++ + NEI L +++
Sbjct: 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-YRNEIAYLNKLQQH 67
Query: 461 -RNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSY 519
I++ Y + ++ ++V EC L L SI W + + K++ A+
Sbjct: 68 SDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDP--WERK-SYWKNMLEAVHT 123
Query: 520 MH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW--TEFAGTFGYVAP 576
+H H IVH D+ N L+ ++ DFGIA ++P +++ GT Y+ P
Sbjct: 124 IHQHG----IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPP 178
Query: 577 EL-----------AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625
E K++ K DV+S G + + GK P F N L+
Sbjct: 179 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP--F-----QQIINQISKLH 231
Query: 626 EILDPRLPLP-----SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
I+DP + +++QD ++ CL+ P+ R ++ +
Sbjct: 232 AIIDPNHEIEFPDIPEKDLQD-VLK------CCLKRDPKQRISIPELLA 273
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 5e-33
Identities = 58/282 (20%), Positives = 110/282 (39%), Gaps = 38/282 (13%)
Query: 403 NFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHR 461
+F + +G G + ++ + VAVK+ S E++ L E H
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFAD------REVQLLRESDEHP 78
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH 521
N+++++ + ++ E L +L E + + +++ + L+++H
Sbjct: 79 NVIRYFCTEKDRQFQYIAIE-LCAATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLH 135
Query: 522 HDCFPPIVHRDISSKNVLLSSEYE-----ARVSDFGIAKFLKPGSS---NWTEFAGTFGY 573
IVHRD+ N+L+S A +SDFG+ K L G + GT G+
Sbjct: 136 SLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGW 192
Query: 574 VAPEL---AYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILD 629
+APE+ T D++S G + VI +G HP S + +
Sbjct: 193 IAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFG--------KSLQRQANILLGA 244
Query: 630 PRLPLPSRNIQDKLISILEVALL--CLEESPESRPTMQTVCQ 669
L +K ++ L+ + P+ RP+ + V +
Sbjct: 245 CSLDCLHP---EKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 5e-33
Identities = 52/294 (17%), Positives = 107/294 (36%), Gaps = 57/294 (19%)
Query: 399 RATKNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQRE-FLNEIKALT 456
R +F + IG GG V++ + G+ +K + E E+KAL
Sbjct: 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIK--------RVKYNNEKAEREVKALA 59
Query: 457 EIRHRNIVKFYGF----------------CSHPRHSFLVYECLERGSLAEILSNDGSIK- 499
++ H NIV + G S + F+ E ++G+L + + K
Sbjct: 60 KLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 119
Query: 500 --EFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557
+ + + + + Y+H +++RD+ N+ L + ++ DFG+ L
Sbjct: 120 DKVLAL----ELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGLVTSL 172
Query: 558 KPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSS 616
K GT Y++PE + ++ D+Y+ G++ E++ +
Sbjct: 173 KNDGKRTR-SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKF---- 227
Query: 617 SSNMNLSLNEILDPRLPLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
++ D + + + L+ L + PE RP + +
Sbjct: 228 -------FTDLRDGIISDIFDKKEKT-LLQ------KLLSKKPEDRPNTSEILR 267
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 129 bits (325), Expect = 5e-33
Identities = 59/275 (21%), Positives = 101/275 (36%), Gaps = 40/275 (14%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
+ +G G V+R + +G AVK ++ ++ + E+ A +
Sbjct: 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVK--------KVRLEVFRVEELVACAGLS 108
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSY 519
IV YG + E LE GSL +++ G + E + L Y
Sbjct: 109 SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPED--RAL-YYLGQALEGLEY 165
Query: 520 MHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFGIAKFLKPGSSNWTE-----FAGTFGY 573
+H I+H D+ + NVLLSS+ A + DFG A L+P + GT +
Sbjct: 166 LHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETH 222
Query: 574 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN--LSLNEILD-- 629
+APE+ K D++S + L ++ G HP + +I
Sbjct: 223 MAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW----------TQYFRGPLCLKIASEP 272
Query: 630 -PRLPLPSRNIQDKLISILEVALLCLEESPESRPT 663
P +P + ++ L + P R +
Sbjct: 273 PPIREIPP-SCAPLTAQAIQ---EGLRKEPVHRAS 303
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 6e-33
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 19/265 (7%)
Query: 410 IGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
+G GG ++VY E VA+K + + F E+ +++ H+NIV
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPI 528
+LV E +E +L+E + + G + S N + + + + H I
Sbjct: 79 VDEEDDCYYLVMEYIEGPTLSEYIESHGPL---SVDTAINFTNQILDGIKHAHDM---RI 132
Query: 529 VHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA-GTFGYVAPELAYTMKVTEK 587
VHRDI +N+L+ S ++ DFGIAK L S T GT Y +PE A E
Sbjct: 133 VHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDEC 192
Query: 588 CDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISIL 647
D+YS G++ E++ G+ P F + + +++++ I D +P + +++ + L
Sbjct: 193 TDIYSIGIVLYEMLVGEPP--F-----NGETAVSIAIKHIQDS-VPNVTTDVRKDIPQSL 244
Query: 648 E-VALLCLEESPESRPTMQTVCQLL 671
V L E+ +R +T+ ++
Sbjct: 245 SNVILRATEKDKANRY--KTIQEMK 267
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 8e-33
Identities = 63/280 (22%), Positives = 124/280 (44%), Gaps = 28/280 (10%)
Query: 402 KNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
++++ IG G + G+++ K+ ++E + ++ ++E+ L E++H
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLLRELKH 64
Query: 461 RNIVKFYGFCSHPRHSFL--VYECLERGSLAEILSNDGSIKEF---SWIVRTNVIKSVAN 515
NIV++Y ++ L V E E G LA +++ +++ +++R V+ +
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLR--VMTQLTL 122
Query: 516 ALSYMH--HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGY 573
AL H D ++HRD+ NV L + ++ DFG+A+ L +S F GT Y
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYY 182
Query: 574 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633
++PE M EK D++S G L E+ P F ++ S L+
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPP--F-----TAFSQKELAGKIREGKFRR 235
Query: 634 LP---SRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670
+P S + + +I+ L RP+++ + +
Sbjct: 236 IPYRYSDELNE-IIT------RMLNLKDYHRPSVEEILEN 268
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 1e-32
Identities = 61/274 (22%), Positives = 112/274 (40%), Gaps = 27/274 (9%)
Query: 402 KNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
+ + Q IG G + G +K+ + +S + E E+ L ++H
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS-KEREESRREVAVLANMKH 82
Query: 461 RNIVKFYGFCSHPRHSFLVYECLERGSLAEILS--NDGSIKE---FSWIVRTNVIKSVAN 515
NIV++ ++V + E G L + ++ +E W V+ +
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQ------ICL 136
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVA 575
AL ++H I+HRDI S+N+ L+ + ++ DFGIA+ L GT Y++
Sbjct: 137 ALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLS 193
Query: 576 PELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635
PE+ K D+++ G + E+ KH F + S NL L I P+
Sbjct: 194 PEICENKPYNNKSDIWALGCVLYELCTLKHA--F-----EAGSMKNLVLKIISGSFPPVS 246
Query: 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
L S++ + +P RP++ ++ +
Sbjct: 247 LH-YSYDLRSLVS---QLFKRNPRDRPSVNSILE 276
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 1e-32
Identities = 69/271 (25%), Positives = 124/271 (45%), Gaps = 35/271 (12%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
+ F + IG G V++G + + +VVA+K L +E ++ + EI L++
Sbjct: 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIE-DIQQEITVLSQCD 78
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSY 519
+ K+YG +++ E L GS ++L G + E + I +++ + L Y
Sbjct: 79 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDE-TQI--ATILREILKGLDY 134
Query: 520 MHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELA 579
+H + +HRDI + NVLLS E +++DFG+A L F GT ++APE+
Sbjct: 135 LHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI 191
Query: 580 YTMKVTEKCDVYSFGVLALEVIKGK------HPRDFISLLSSSSSNMNLSLNEILDPRLP 633
K D++S G+ A+E+ +G+ HP + L+ ++ P L
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-----------PTLE 240
Query: 634 LP-SRNIQDKLISILEVALLCLEESPESRPT 663
S+ +++ + CL + P RPT
Sbjct: 241 GNYSKPLKE-FVE------ACLNKEPSFRPT 264
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 2e-32
Identities = 62/289 (21%), Positives = 120/289 (41%), Gaps = 45/289 (15%)
Query: 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH- 460
+ + + IG GG + V++ ++ A+K + ++ + NEI L +++
Sbjct: 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDS-YRNEIAYLNKLQQH 114
Query: 461 -RNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSY 519
I++ Y + ++ ++V EC L L SI W + + K++ A+
Sbjct: 115 SDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDP--WERK-SYWKNMLEAVHT 170
Query: 520 MH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE--FAGTFGYVAP 576
+H H IVH D+ N L+ ++ DFGIA ++P +++ + G Y+ P
Sbjct: 171 IHQHG----IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPP 225
Query: 577 EL-----------AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625
E K++ K DV+S G + + GK P F N L+
Sbjct: 226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTP--F-----QQIINQISKLH 278
Query: 626 EILDPRLPLP-----SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
I+DP + +++QD ++ CL+ P+ R ++ +
Sbjct: 279 AIIDPNHEIEFPDIPEKDLQD-VLK------CCLKRDPKQRISIPELLA 320
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 1e-31
Identities = 66/270 (24%), Positives = 124/270 (45%), Gaps = 32/270 (11%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
K + + IG G +VY ++ +G+ VA+++ + L + + +NEI + E +
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQ---MNLQQQPKKELIINEILVMRENK 75
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSY 519
+ NIV + ++V E L GSL ++++ + E I V + AL +
Sbjct: 76 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDE-GQI--AAVCRECLQALEF 131
Query: 520 MHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELA 579
+H + ++HRDI S N+LL + +++DFG + P S + GT ++APE+
Sbjct: 132 LHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188
Query: 580 YTMKVTEKCDVYSFGVLALEVIKGK------HPRDFISLLSSSSSNMNLSLNEILDPRLP 633
K D++S G++A+E+I+G+ +P + L++++ + P L
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-----------PELQ 237
Query: 634 LPSRNIQDKLISILEVALLCLEESPESRPT 663
P + L CLE E R +
Sbjct: 238 NPE-KLSAIFRDFLN---RCLEMDVEKRGS 263
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 3e-31
Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 36/272 (13%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
D+ IG G V E SG VAVK + L + + NE+ + + +
Sbjct: 44 RLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKM---MDLRKQQRRELLFNEVVIMRDYQ 100
Query: 460 HRNIVKFYGFCSHPRHSFL--VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANAL 517
H N+V+ Y S+ L + E L+ G+L +I+S + E I V ++V AL
Sbjct: 101 HFNVVEMYK--SYLVGEELWVLMEFLQGGALTDIVSQ-VRLNE-EQI--ATVCEAVLQAL 154
Query: 518 SYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE 577
+Y+H ++HRDI S ++LL+ + ++SDFG + GT ++APE
Sbjct: 155 AYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPE 211
Query: 578 LAYTMKVTEKCDVYSFGVLALEVIKGK------HPRDFISLLSSSSSNMNLSLNEILDPR 631
+ + D++S G++ +E++ G+ P + L S P+
Sbjct: 212 VISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPP-----------PK 260
Query: 632 LPLPSRNIQDKLISILEVALLCLEESPESRPT 663
L + + L LE L P+ R T
Sbjct: 261 LKNSHK-VSPVLRDFLE---RMLVRDPQERAT 288
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 3e-31
Identities = 69/271 (25%), Positives = 127/271 (46%), Gaps = 34/271 (12%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
+ FD + +G G SVY+ +G++VA+K+ + S++ E + EI + +
Sbjct: 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP--VESDLQ---EIIKEISIMQQCD 82
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALS 518
++VK+YG ++V E GS+++I+ + ++ E I +++S L
Sbjct: 83 SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTE-DEIAT--ILQSTLKGLE 139
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL 578
Y+H +HRDI + N+LL++E A+++DFG+A L + GT ++APE+
Sbjct: 140 YLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEV 196
Query: 579 AYTMKVTEKCDVYSFGVLALEVIKGK------HPRDFISLLSSSSSNMNLSLNEILDPRL 632
+ D++S G+ A+E+ +GK HP I ++ ++ P
Sbjct: 197 IQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPP-----------PTF 245
Query: 633 PLPSRNIQDKLISILEVALLCLEESPESRPT 663
P D ++ CL +SPE R T
Sbjct: 246 RKPE-LWSDNFTDFVK---QCLVKSPEQRAT 272
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 3e-31
Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 18/207 (8%)
Query: 410 IGIGGQASVYRGE---LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
+G GG + V+ VAVK + L + S F E + + H IV
Sbjct: 20 LGFGGMSEVHLARDLRD--HRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 467 Y--GF--CSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH 522
Y G ++V E ++ +L +I+ +G + + VI AL++ H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TPKRAIEVIADACQALNFSHQ 134
Query: 523 DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA---GTFGYVAPELA 579
+ I+HRD+ N+++S+ +V DFGIA+ + ++ T+ A GT Y++PE A
Sbjct: 135 N---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
Query: 580 YTMKVTEKCDVYSFGVLALEVIKGKHP 606
V + DVYS G + EV+ G+ P
Sbjct: 192 RGDSVDARSDVYSLGCVLYEVLTGEPP 218
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 4e-31
Identities = 63/303 (20%), Positives = 112/303 (36%), Gaps = 54/303 (17%)
Query: 399 RATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTE 457
R +F+ +G G V + A+KK + +E + L+E+ L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKK---IRHTEEKLST-ILSEVMLLAS 58
Query: 458 IRHRNIVKFYGFCSHPRHS-------------FLVYECLERGSLAEILSNDGSIKEFSWI 504
+ H+ +V++Y R+ F+ E E G+L +++ ++ ++
Sbjct: 59 LNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEY 118
Query: 505 VRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW 564
R + + + ALSY+H I+HRD+ N+ + ++ DFG+AK +
Sbjct: 119 WR--LFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 565 --------------TEFAGTFGYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDF 609
T GT YVA E L T EK D+YS G++ E+I
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFST--- 230
Query: 610 ISLLSSSSSNMNLSLNEILDPRLPLPSR---NIQDKLISILEVALLCLEESPESRPTMQT 666
L ++ + P N I+ L ++ P RP +T
Sbjct: 231 -------GMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIR---LLIDHDPNKRPGART 280
Query: 667 VCQ 669
+
Sbjct: 281 LLN 283
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 5e-31
Identities = 53/269 (19%), Positives = 104/269 (38%), Gaps = 35/269 (13%)
Query: 11 SVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEI---DNNQLFGQIPRSLRNLASLN 67
+ N +L + N++SG+ + + + N+ + L + +
Sbjct: 6 PINNNFSLSQN-SFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLKECL--INQFS 62
Query: 68 RVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGS 127
+ L + +L+ ++ + P +T L+I+ N + L L+ N ++ +
Sbjct: 63 ELQLNRLNLS-SLPDNLP--PQITVLEITQNAL-ISLPELPA---SLEYLDACDNRLS-T 114
Query: 128 IPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELE 187
+P L LD NQ+ +P L+ +N + N+L+ LP + S LE
Sbjct: 115 LPELPA---SLKHLDVDNNQLT-MLPELPALLEYIN---ADNNQLT-MLPELPTS---LE 163
Query: 188 YLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSE----LDLSHNF 243
L + N+L+ +PE +L L++S N + P + E N
Sbjct: 164 VLSVRNNQLT-FLPELPESL---EALDVSTNLL-ESLPAVPVRNHHSEETEIFFRCRENR 218
Query: 244 LGGEIPPQICNLESLEKLNVSHNNLSGLI 272
+ IP I +L+ + + N LS I
Sbjct: 219 I-THIPENILSLDPTCTIILEDNPLSSRI 246
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 120 bits (301), Expect = 1e-28
Identities = 56/311 (18%), Positives = 96/311 (30%), Gaps = 55/311 (17%)
Query: 10 PSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRV 69
L L +LS S+P + Q+T LEI N L +P +L L+
Sbjct: 53 LKECLINQFSELQLNRLNLS-SLPDNLPP--QITVLEITQNAL-ISLPELPASLEYLD-- 106
Query: 70 HLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIP 129
N L+ + E+ +L LD+ +N QL L P
Sbjct: 107 -ACDNRLS-TLPELPA---SLKHLDVDNN--------------QLTML-----------P 136
Query: 130 PEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYL 189
L ++ NQ+ +P +L+ L+ + N+L+ LP + S LE L
Sbjct: 137 ELPA---LLEYINADNNQLT-MLPELPTSLEVLS---VRNNQLTF-LPELPES---LEAL 185
Query: 190 DLSTNKLSGSIPETLGNLLK----VHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLG 245
D+STN L S+P + N+ P + L + L N L
Sbjct: 186 DVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPL- 242
Query: 246 GEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYD 305
+ + ++ + + +H D + +
Sbjct: 243 SSRIRESLSQQTAQPDYHGPRIYFSMSDGQQNTLH-RPLADAVTAWFPENKQSDVSQIWH 301
Query: 306 PIQALRGNRGL 316
+
Sbjct: 302 AFEHEEHANTF 312
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 96.2 bits (239), Expect = 6e-21
Identities = 48/278 (17%), Positives = 96/278 (34%), Gaps = 29/278 (10%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N L ++P +L+ L N LS ++P +L +L++DNNQL +P
Sbjct: 90 NALI-SLPEL---PASLEYLDACDNRLS-TLPELPASL---KHLDVDNNQL-TMLPELPA 140
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
L +N + N LT + E+ +L L + +N + L L+ S
Sbjct: 141 LLEYIN---ADNNQLT-MLPELPT---SLEVLSVRNNQL--TFLPEL--PESLEALDVST 189
Query: 122 NNITGSIPPEIGKLYQLHK----LDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLP 177
N + S+P + + + N+I IP + +L ++L N LS +
Sbjct: 190 NLLE-SLPAVPVRNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247
Query: 178 RVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSEL 237
L + S S + + + F + ++ ++ E
Sbjct: 248 ESLSQQTAQPDYHGPRIYFSMSDGQQNTLHRPLA--DAVTAWFPENKQSDVSQIWHAFEH 305
Query: 238 DLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSC 275
+ N ++ + S + ++ +
Sbjct: 306 EEHANTF-SAFLDRLSDTVSARNTSGFREQVAAWLEKL 342
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} Length = 571 | Back alignment and structure |
|---|
Score = 43.4 bits (102), Expect = 2e-04
Identities = 15/96 (15%), Positives = 35/96 (36%), Gaps = 7/96 (7%)
Query: 199 SIPETLGNLLKVHYLNLSNN--QFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLE 256
SI + N + + N ++ +K + + + N + C +
Sbjct: 2 SIMLPINNNFSLSQNSFYNTISGTYADYFSAWDKWEKQALPGENRNEAVSLLK--ECLIN 59
Query: 257 SLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
+L ++ NLS L + ++ ++I+ N L
Sbjct: 60 QFSELQLNRLNLSSLPDNLPP---QITVLEITQNAL 92
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 5e-31
Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 12/201 (5%)
Query: 410 IGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
+G GG VY E +VA+K L S+ + E + ++ ++V +
Sbjct: 42 VGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHD 101
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPI 528
F ++ + LA +L G + V +++ + +AL H
Sbjct: 102 FGEIDGQLYVDMRLINGVDLAAMLRRQGPL-APPRAVA--IVRQIGSALDAAHAA---GA 155
Query: 529 VHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE---FAGTFGYVAPELAYTMKVT 585
HRD+ +N+L+S++ A + DFGIA T+ GT Y+APE T
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIASAT--TDEKLTQLGNTVGTLYYMAPERFSESHAT 213
Query: 586 EKCDVYSFGVLALEVIKGKHP 606
+ D+Y+ + E + G P
Sbjct: 214 YRADIYALTCVLYECLTGSPP 234
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 9e-31
Identities = 59/272 (21%), Positives = 114/272 (41%), Gaps = 25/272 (9%)
Query: 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
+ + + +G GG A + + + EV A K LL + + + EI + H
Sbjct: 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH 74
Query: 461 RNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM 520
+++V F+GF F+V E R SL E+ ++ E R ++ + Y+
Sbjct: 75 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTE--PEARY-YLRQIVLGCQYL 131
Query: 521 HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAY 580
H + ++HRD+ N+ L+ + E ++ DFG+A ++ GT Y+APE+
Sbjct: 132 HRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS 188
Query: 581 TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP---SR 637
+ + DV+S G + ++ GK P + +S + + I +P +
Sbjct: 189 KKGHSFEVDVWSIGCIMYTLLVGKPPFE--------TSCLKETYLRIKKNEYSIPKHINP 240
Query: 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
+ +L+ P +RPT+ +
Sbjct: 241 VAASLIQKMLQT-------DPTARPTINELLN 265
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 1e-30
Identities = 59/272 (21%), Positives = 114/272 (41%), Gaps = 25/272 (9%)
Query: 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
+ + + +G GG A + + + EV A K LL + + + EI + H
Sbjct: 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH 100
Query: 461 RNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM 520
+++V F+GF F+V E R SL E+ ++ E R ++ + Y+
Sbjct: 101 QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTE--PEARY-YLRQIVLGCQYL 157
Query: 521 HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAY 580
H + ++HRD+ N+ L+ + E ++ DFG+A ++ GT Y+APE+
Sbjct: 158 HRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLS 214
Query: 581 TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP---SR 637
+ + DV+S G + ++ GK P + +S + + I +P +
Sbjct: 215 KKGHSFEVDVWSIGCIMYTLLVGKPPFE--------TSCLKETYLRIKKNEYSIPKHINP 266
Query: 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
+ +L+ P +RPT+ +
Sbjct: 267 VAASLIQKMLQT-------DPTARPTINELLN 291
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 123 bits (311), Expect = 2e-30
Identities = 69/309 (22%), Positives = 129/309 (41%), Gaps = 55/309 (17%)
Query: 394 YEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVK----KFHSLLLSEISVQREFL 449
+E+ ++ +E+ +G G +V G VAVK F + L EI + E
Sbjct: 9 FEQSLK--NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESD 66
Query: 450 NEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRT-- 507
+ H N++++Y + R ++ E L +L +++ + E + +
Sbjct: 67 D---------HPNVIRYYCSETTDRFLYIALE-LCNLNLQDLVESKNVSDENLKLQKEYN 116
Query: 508 --NVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-------------YEARVSDFG 552
++++ +A+ ++++H I+HRD+ +N+L+S+ +SDFG
Sbjct: 117 PISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 553 IAKFLKPGSSNWT----EFAGTFGYVAPEL-------AYTMKVTEKCDVYSFGVLALEVI 601
+ K L G S++ +GT G+ APEL ++T D++S G + ++
Sbjct: 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 602 -KGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPES 660
KGKHP S+ SL+E+ D LIS ++ P
Sbjct: 234 SKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATD-LIS------QMIDHDPLK 286
Query: 661 RPTMQTVCQ 669
RPT V +
Sbjct: 287 RPTAMKVLR 295
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 3e-30
Identities = 57/248 (22%), Positives = 97/248 (39%), Gaps = 10/248 (4%)
Query: 49 NNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFY-GEIWS- 106
N++ +P + +S R+ LE N L VF LT L +S N S
Sbjct: 15 NSKGLTSVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQ 72
Query: 107 SWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIEL-GNLKSLNYL 165
S L L+ S N + ++ L QL LDF + + + +L++L YL
Sbjct: 73 SDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 131
Query: 166 VLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQFRKEF 224
++ + LS LE L ++ N + L + +L+LS Q +
Sbjct: 132 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLS 191
Query: 225 PVELEKLVQLSELDLSHNFLGGEIPPQI-CNLESLEKLNVSHNNLSGLIPSCFEGM-HGL 282
P L L L++SHN + L SL+ L+ S N++ + L
Sbjct: 192 PTAFNSLSSLQVLNMSHNNFF-SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSL 250
Query: 283 SCIDISYN 290
+ ++++ N
Sbjct: 251 AFLNLTQN 258
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 3e-30
Identities = 59/248 (23%), Positives = 94/248 (37%), Gaps = 13/248 (5%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQL--FGQIPRS 59
L+ ++P + ++ L L SN L G L QLT L + +N L G +S
Sbjct: 17 KGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQS 73
Query: 60 LRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSS--WGKCQQLGTL 117
SL + L N + +S F L LD H+N ++ + + L L
Sbjct: 74 DFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNL-KQMSEFSVFLSLRNLIYL 131
Query: 118 NFSMNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYLVLNGNKLSGN 175
+ S + I L L L + N + L++L +L L+ +L
Sbjct: 132 DISHTHTR-VAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQL 190
Query: 176 LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLV-QL 234
P SLS L+ L++S N L + L+ S N EL+ L
Sbjct: 191 SPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSL 250
Query: 235 SELDLSHN 242
+ L+L+ N
Sbjct: 251 AFLNLTQN 258
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 1e-27
Identities = 61/236 (25%), Positives = 94/236 (39%), Gaps = 28/236 (11%)
Query: 2 NHLSGAIPPSV-GNFTNLKGLYLYSNSLS--GSVPGEIGNLMQLTNLEIDNNQLFGQIPR 58
N L ++P V T L L L SN LS G L L++ N + +
Sbjct: 38 NKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGV-ITMSS 95
Query: 59 SLRNLASLNRVHLEQNHLTGNISE--VFGIYPNLTFLDISHNN--------FYGEIWSSW 108
+ L L + + ++L +SE VF NL +LDISH + F G
Sbjct: 96 NFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG------ 148
Query: 109 GKCQQLGTLNFSMNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYLV 166
L L + N+ + P+I +L L LD S Q+ ++ +L SL L
Sbjct: 149 --LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE-QLSPTAFNSLSSLQVLN 205
Query: 167 LNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLK-VHYLNLSNNQFR 221
++ N L+ L+ LD S N + S + L + + +LNL+ N F
Sbjct: 206 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 5e-25
Identities = 50/190 (26%), Positives = 77/190 (40%), Gaps = 9/190 (4%)
Query: 116 TLNFSMNNITGSIPPEI-GKLYQLHKLDFSLNQI--VGEIPIELGNLKSLNYLVLNGNKL 172
L N + S+P + KL QL KL S N + G SL YL L+ N +
Sbjct: 32 RLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGV 90
Query: 173 SGNLPRVLGSLSELEYLDLSTNKLSGSIPE--TLGNLLKVHYLNLSNNQFRKEFPVELEK 230
+ L +LE+LD + L + E +L + YL++S+ R F
Sbjct: 91 I-TMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 148
Query: 231 LVQLSELDLSHNFLGGEIPPQI-CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISY 289
L L L ++ N P I L +L L++S L L P+ F + L +++S+
Sbjct: 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 208
Query: 290 NELLGLIPNS 299
N L
Sbjct: 209 NNFFSLDTFP 218
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} Length = 306 | Back alignment and structure |
|---|
Score = 87.8 bits (218), Expect = 3e-19
Identities = 38/154 (24%), Positives = 59/154 (38%), Gaps = 8/154 (5%)
Query: 151 EIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLS--GSIPETLGNLL 208
+P + S L L NKL V L++L L LS+N LS G ++
Sbjct: 21 SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTT 78
Query: 209 KVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQ--ICNLESLEKLNVSHN 266
+ YL+LS N L QL LD H+ L ++ +L +L L++SH
Sbjct: 79 SLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLK-QMSEFSVFLSLRNLIYLDISHT 136
Query: 267 NLSGLIPSCFEGMHGLSCIDISYNELLGLIPNST 300
+ F G+ L + ++ N
Sbjct: 137 HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDI 170
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 122 bits (307), Expect = 9e-30
Identities = 62/283 (21%), Positives = 109/283 (38%), Gaps = 31/283 (10%)
Query: 10 PSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRV 69
+ T L L SN+++ ++ + LT L D+N+L + + L L +
Sbjct: 58 TGIEKLTGLTKLICTSNNIT-TLD--LSQNTNLTYLACDSNKL-TNLD--VTPLTKLTYL 111
Query: 70 HLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIP 129
+ + N LT P LT+L+ + N EI QL L+ +N
Sbjct: 112 NCDTNKLT---KLDVSQNPLLTYLNCARNTLT-EI--DVSHNTQLTELDCHLNKKITK-- 163
Query: 130 PEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYL 189
++ QL LD S N+I +++ K LN L + N ++ L L +L +L
Sbjct: 164 LDVTPQTQLTTLDCSFNKITE---LDVSQNKLLNRLNCDTNNIT-KLD--LNQNIQLTFL 217
Query: 190 DLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIP 249
D S+NKL+ I + L ++ Y + S N + +++ L +L+ L L EI
Sbjct: 218 DCSSNKLT-EID--VTPLTQLTYFDCSVNPLTE---LDVSTLSKLTTLHCIQTDL-LEID 270
Query: 250 PQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
+ + L + L +D +
Sbjct: 271 --LTHNTQLIYFQAEGCRK--IKELDVTHNTQLYLLDCQAAGI 309
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 2e-29
Identities = 60/289 (20%), Positives = 115/289 (39%), Gaps = 28/289 (9%)
Query: 11 SVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVH 70
S L L +++S++ + G I L LT L +N + + L +L +
Sbjct: 37 SEEQLATLTSLDCHNSSIT-DMTG-IEKLTGLTKLICTSNNI-TTLD--LSQNTNLTYLA 91
Query: 71 LEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPP 130
+ N LT N+ LT+L+ N + L LN + N +T I
Sbjct: 92 CDSNKLT-NLD--VTPLTKLTYLNCDTNKLTK---LDVSQNPLLTYLNCARNTLT-EID- 143
Query: 131 EIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLD 190
+ QL +LD LN+ + +++ L L + NK++ L + L L+
Sbjct: 144 -VSHNTQLTELDCHLNKKIT--KLDVTPQTQLTTLDCSFNKIT-ELD--VSQNKLLNRLN 197
Query: 191 LSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPP 250
TN ++ + L +++ +L+ S+N+ + +++ L QL+ D S N L E+
Sbjct: 198 CDTNNIT-KLD--LNQNIQLTFLDCSSNKLTE---IDVTPLTQLTYFDCSVNPLT-ELD- 249
Query: 251 QICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNS 299
+ L L L+ +L + + + + L + N+
Sbjct: 250 -VSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNT 297
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 1e-27
Identities = 60/289 (20%), Positives = 99/289 (34%), Gaps = 31/289 (10%)
Query: 11 SVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVH 70
V T L L +N L+ ++ LT L N L +I + + L +
Sbjct: 101 DVTPLTKLTYLNCDTNKLT---KLDVSQNPLLTYLNCARNTL-TEID--VSHNTQLTELD 154
Query: 71 LEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPP 130
N + LT LD S N + + L LN NNIT +
Sbjct: 155 CHLNKKITKLD--VTPQTQLTTLDCSFNKITE---LDVSQNKLLNRLNCDTNNIT-KLD- 207
Query: 131 EIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLD 190
+ + QL LD S N++ I++ L L Y + N L+ L + +LS+L L
Sbjct: 208 -LNQNIQLTFLDCSSNKLTE---IDVTPLTQLTYFDCSVNPLT-ELD--VSTLSKLTTLH 260
Query: 191 LSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPP 250
L I L + ++ Y + KE +++ QL LD + E+
Sbjct: 261 CIQTDLL-EID--LTHNTQLIYFQAEGCRKIKE--LDVTHNTQLYLLDCQAAGIT-ELD- 313
Query: 251 QICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNS 299
+ L L +++ L+ L L + +
Sbjct: 314 -LSQNPKLVYLYLNNTELTEL---DVSHNTKLKSLSCVNAHIQDFSSVG 358
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 2e-27
Identities = 58/276 (21%), Positives = 105/276 (38%), Gaps = 28/276 (10%)
Query: 17 NLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHL 76
N + + + L LT+L+ N+ + + + L L ++ N++
Sbjct: 19 NFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSI-TDMT-GIEKLTGLTKLICTSNNI 76
Query: 77 TGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLY 136
T + NLT+L N +L LN N +T + + +
Sbjct: 77 T-TLD--LSQNTNLTYLACDSNKLTN---LDVTPLTKLTYLNCDTNKLT-KLD--VSQNP 127
Query: 137 QLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKL 196
L L+ + N + I++ + L L + NK L + ++L LD S NK+
Sbjct: 128 LLTYLNCARNTLT---EIDVSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKI 182
Query: 197 SGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLE 256
+ + + ++ LN N K ++L + +QL+ LD S N L EI + L
Sbjct: 183 T-ELD--VSQNKLLNRLNCDTNNITK---LDLNQNIQLTFLDCSSNKLT-EID--VTPLT 233
Query: 257 SLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
L + S N L+ L S L+ + +L
Sbjct: 234 QLTYFDCSVNPLTELDVSTLS---KLTTLHCIQTDL 266
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 4e-19
Identities = 45/265 (16%), Positives = 84/265 (31%), Gaps = 42/265 (15%)
Query: 11 SVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVH 70
+ L L SN L+ + + L QLT + N L ++ S L+ L +H
Sbjct: 207 DLNQNIQLTFLDCSSNKLT-EID--VTPLTQLTYFDCSVNPL-TELDVS--TLSKLTTLH 260
Query: 71 LEQNHLTG-NISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIP 129
Q L +++ L + E+ QL L+ IT +
Sbjct: 261 CIQTDLLEIDLTHN----TQLIYFQAEGCRKIKEL--DVTHNTQLYLLDCQAAGIT-ELD 313
Query: 130 PEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYL 189
+ + +L L + ++ E+ + + L L + + +G + L
Sbjct: 314 --LSQNPKLVYLYLNNTELT-ELDV--SHNTKLKSLSCVNAHIQ-DFS-SVGKIPALNNN 366
Query: 190 DLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIP 249
+ + ETL N + +S + LD N + I
Sbjct: 367 FEAEGQTITMPKETLTNNSL--TIAVSPDL-----------------LDQFGNPM--NIE 405
Query: 250 PQICNLESLEKLNVSHNNLSGLIPS 274
P + ++ NLS P+
Sbjct: 406 PGDGGVYDQATNTITWENLSTDNPA 430
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} Length = 457 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 4e-06
Identities = 29/204 (14%), Positives = 64/204 (31%), Gaps = 29/204 (14%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
V + T L L + ++ ++ +L L ++N +L ++ +
Sbjct: 282 AEGCRKIKELDVTHNTQLYLLDCQAAGITEL---DLSQNPKLVYLYLNNTEL-TELD--V 335
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFS 120
+ L + H+ + S V I P L + + +
Sbjct: 336 SHNTKLKSLSCVNAHIQ-DFSSVGKI-PALNNNFEAEGQT-----------ITMPKETLT 382
Query: 121 MNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVL 180
N++T ++ P++ LD N + I G + + LS + P V
Sbjct: 383 NNSLTIAVSPDL--------LDQFGNPM--NIEPGDGGVYDQATNTITWENLSTDNPAVT 432
Query: 181 GSLSELEYLDLSTNKLSGSIPETL 204
+ + + T P+ +
Sbjct: 433 YTFTSENGAIVGTVTTPFEAPQPI 456
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 1e-29
Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 38/280 (13%)
Query: 407 EQCIGIGGQASVYRGEL--PSGEV--VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN 462
+ +G G V RGE PSG+ VAVK +LS+ +F+ E+ A+ + HRN
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 463 IVKFYGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSYMH 521
+++ YG P +V E GSL + L + G + VA + Y+
Sbjct: 83 LIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLS---RYAVQVAEGMGYLE 138
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT---FGYVAPEL 578
F +HRD++++N+LL++ ++ DFG+ + L ++ F + APE
Sbjct: 139 SKRF---IHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 195
Query: 579 AYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDP------R 631
T + D + FGV E+ G+ P L+ ++IL R
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWI------------GLNGSQILHKIDKEGER 243
Query: 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
LP P +D I V + C PE RPT + L
Sbjct: 244 LPRP----EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 279
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 1e-29
Identities = 43/220 (19%), Positives = 82/220 (37%), Gaps = 21/220 (9%)
Query: 401 TKNFDAEQCIGIGGQ--ASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTE 457
++ IG G + +V P+GE V V++ +L + E+
Sbjct: 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRI-NLEACSNEMVTFLQGELHVSKL 82
Query: 458 IRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSN--DGSIKEFSWIVRTNVIKSVAN 515
H NIV + ++V + GS +++ + E I +++ V
Sbjct: 83 FNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNE-LAIA--YILQGVLK 139
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL-------KPGSSNWTEFA 568
AL Y+HH VHR + + ++L+S + + +S + +
Sbjct: 140 ALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSV 196
Query: 569 GTFGYVAPELAYTMKV--TEKCDVYSFGVLALEVIKGKHP 606
+++PE+ K D+YS G+ A E+ G P
Sbjct: 197 KVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 236
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 2e-29
Identities = 63/268 (23%), Positives = 112/268 (41%), Gaps = 18/268 (6%)
Query: 404 FDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN 462
F+ +G G V++ PSG V+A K H L + +++ + + E++ L E
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNSPY 92
Query: 463 IVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH 522
IV FYG + E ++ GSL ++L G I E + V +V L+Y+
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ---ILGKVSIAVIKGLTYLRE 149
Query: 523 DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTM 582
I+HRD+ N+L++S E ++ DFG++ L +N F GT Y++PE
Sbjct: 150 KHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN--SFVGTRSYMSPERLQGT 205
Query: 583 KVTEKCDVYSFGVLALEVIKGKHP--------RDFISLLSSSSSNMNLSLNEILDPRLPL 634
+ + D++S G+ +E+ G++P + + R
Sbjct: 206 HYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLN 265
Query: 635 PSRNIQDKLISILEVALLCLEESPESRP 662
++I E+ + E P P
Sbjct: 266 KFGMDSRPPMAIFELLDYIVNEPPPKLP 293
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 2e-29
Identities = 66/291 (22%), Positives = 112/291 (38%), Gaps = 42/291 (14%)
Query: 407 EQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIV 464
+ + GG A VY + + SG A+K+ LL +E R + E+ + ++ H NIV
Sbjct: 33 RRVLAEGGFAFVYEAQDVGSGREYALKR---LLSNEEEKNRAIIQEVCFMKKLSGHPNIV 89
Query: 465 KFYGFCSHPRHS-------FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANAL 517
+F S + FL+ L +G L E L S S + A+
Sbjct: 90 QFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAV 149
Query: 518 SYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN------------WT 565
+MH PPI+HRD+ +N+LLS++ ++ DFG A +
Sbjct: 150 QHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEI 208
Query: 566 EFAGTFGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNL 622
T Y PE+ + EK D+++ G + + +HP + + L + ++
Sbjct: 209 TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSI 268
Query: 623 SLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673
P LI L+ +PE R ++ V L +
Sbjct: 269 -------PPHDTQYTVFHS-LIRA------MLQVNPEERLSIAEVVHQLQE 305
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 2e-29
Identities = 78/294 (26%), Positives = 130/294 (44%), Gaps = 59/294 (20%)
Query: 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
+++ ++ IG G A V P E VA+K+ +L + S+ E L EI+A+++ H
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQTSMD-ELLKEIQAMSQCHH 72
Query: 461 RNIVKFYGFCSHPRHSFL-------VYECLERGSLAEIL--------SNDGSIKEFSWIV 505
NIV +Y SF+ V + L GS+ +I+ G + E S I
Sbjct: 73 PNIVSYYT-------SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE-STI- 123
Query: 506 RTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565
+++ V L Y+H + +HRD+ + N+LL + +++DFG++ FL G
Sbjct: 124 -ATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 179
Query: 566 E-----FAGTFGYVAPEL-----AYTMKVTEKCDVYSFGVLALEVIKGK------HPRDF 609
F GT ++APE+ Y K D++SFG+ A+E+ G P
Sbjct: 180 NKVRKTFVGTPCWMAPEVMEQVRGY----DFKADIWSFGITAIELATGAAPYHKYPPMKV 235
Query: 610 ISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPT 663
+ L + L L ++ + +IS LCL++ PE RPT
Sbjct: 236 LMLTLQNDPPS-LETGVQDKEMLKKYGKSFRK-MIS------LCLQKDPEKRPT 281
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 2e-29
Identities = 56/273 (20%), Positives = 110/273 (40%), Gaps = 15/273 (5%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
+IP G +K L L +N ++ ++ + L L + +N + S +L SL
Sbjct: 45 SIPS--GLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSL 102
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYG-EIWSSWGKCQQLGTLNFSMNNIT 125
+ L N+L+ S F +LTFL++ N + S + +L L +
Sbjct: 103 EHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTF 162
Query: 126 GSIPPEI-GKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLS 184
I + L L +L+ + + P L +++++++L+L+ + L + S
Sbjct: 163 TKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTS 222
Query: 185 ELEYLDLSTNKLSG----SIPE----TLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSE 236
+E L+L L + +L + +++ + L ++ L E
Sbjct: 223 SVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLE 281
Query: 237 LDLSHNFLGGEIPPQIC-NLESLEKLNVSHNNL 268
L+ S N L +P I L SL+K+ + N
Sbjct: 282 LEFSRNQLKS-VPDGIFDRLTSLQKIWLHTNPW 313
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 99.0 bits (247), Expect = 1e-22
Identities = 42/233 (18%), Positives = 74/233 (31%), Gaps = 17/233 (7%)
Query: 2 NHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
N ++ I + +L+ L L N LS L LT L + N SL
Sbjct: 86 NGIN-TIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSL 144
Query: 61 -RNLASLNRVHLEQNHLTGNISE-VFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLN 118
+L L + + I F L L+I ++ S Q + L
Sbjct: 145 FSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLI 204
Query: 119 FSMNNITGSIPPEI-GKLYQLHKLDFSLNQIVG----EIPI----ELGNLKSLNYLVLNG 169
M + + L+ + E+ L + + +
Sbjct: 205 LHMKQHI-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITD 263
Query: 170 NKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQFR 221
L + ++L +S L L+ S N+L S+P+ L + + L N +
Sbjct: 264 ESLF-QVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWD 314
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 95.2 bits (237), Expect = 2e-21
Identities = 40/190 (21%), Positives = 75/190 (39%), Gaps = 10/190 (5%)
Query: 116 TLNFSMNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIEL-GNLKSLNYLVLNGNKLS 173
+L+ S N IT I + L L + N I I + +L SL +L L+ N LS
Sbjct: 56 SLDLSNNRIT-YISNSDLQRCVNLQALVLTSNGIN-TIEEDSFSSLGSLEHLDLSYNYLS 113
Query: 174 GNLPRVLGSLSELEYLDLSTNKLSGSIPE--TLGNLLKVHYLNLSNNQFRKEFPVE-LEK 230
LS L +L+L N ++ E +L K+ L + N + +
Sbjct: 114 NLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAG 172
Query: 231 LVQLSELDLSHNFLGGEIPPQI-CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISY 289
L L EL++ + L P+ +++++ L + L+ + + C+++
Sbjct: 173 LTFLEELEIDASDLQ-SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRD 231
Query: 290 NELLGLIPNS 299
+L +
Sbjct: 232 TDLDTFHFSE 241
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 88.3 bits (219), Expect = 5e-19
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 7/185 (3%)
Query: 111 CQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGN 170
C + G S ++ SIP + + LD S N+I +L +L LVL N
Sbjct: 30 CDRNGICKGSSGSLN-SIPSGL--TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSN 86
Query: 171 KLSGNLPRVLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQFRKEFPVEL- 228
++ SL LE+LDLS N LS ++ L + +LNL N ++ L
Sbjct: 87 GINTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLF 145
Query: 229 EKLVQLSELDLSHNFLGGEIPPQI-CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDI 287
L +L L + + +I + L LE+L + ++L P + + +S + +
Sbjct: 146 SHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLIL 205
Query: 288 SYNEL 292
+
Sbjct: 206 HMKQH 210
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 3e-09
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Query: 190 DLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIP 249
S+ L+ SIP L +K L+LSNN+ +L++ V L L L+ N + I
Sbjct: 37 KGSSGSLN-SIPSGLTEAVK--SLDLSNNRITYISNSDLQRCVNLQALVLTSNGIN-TIE 92
Query: 250 PQI-CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNST 300
+L SLE L++S+N LS L S F+ + L+ +++ N L S
Sbjct: 93 EDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSL 144
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 50.9 bits (122), Expect = 7e-07
Identities = 17/108 (15%), Positives = 35/108 (32%), Gaps = 11/108 (10%)
Query: 1 MNHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQL----FGQ 55
+ L + P + N+ L L+ + + + LE+ + L F +
Sbjct: 183 ASDLQ-SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSE 241
Query: 56 IP----RSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNN 99
+ SL + V + L + ++ L L+ S N
Sbjct: 242 LSTGETNSLIKKFTFRNVKITDESLF-QVMKLLNQISGLLELEFSRNQ 288
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 2e-29
Identities = 63/276 (22%), Positives = 122/276 (44%), Gaps = 37/276 (13%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
+ ++ +G G VY+ +G + A K SE ++ +++ EI+ L
Sbjct: 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIE--TKSEEELE-DYIVEIEILATCD 74
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALS 518
H IVK G H +++ E G++ I+ D + E I V + + AL+
Sbjct: 75 HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTE-PQI--QVVCRQMLEALN 131
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL 578
++H I+HRD+ + NVL++ E + R++DFG++ F GT ++APE+
Sbjct: 132 FLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEV 188
Query: 579 AYTMKVTE-----KCDVYSFGVLALEVIKGK------HPRDFISLLSSSSSNMNLSLNEI 627
+ + K D++S G+ +E+ + + +P + ++ S
Sbjct: 189 VMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDP--------- 239
Query: 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPT 663
P L PS + L+ + L+++PE+RP+
Sbjct: 240 --PTLLTPS-KWSVEFRDFLK---IALDKNPETRPS 269
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 123 bits (309), Expect = 2e-29
Identities = 54/269 (20%), Positives = 95/269 (35%), Gaps = 53/269 (19%)
Query: 407 EQCIGIGGQASVYRGE---LPSGEVVAVKKFHSLLLSEI--SVQREFLNEIKALTEIRHR 461
+ CI GG +Y + +G V +K L+ Q + E + L E+ H
Sbjct: 85 KGCIAHGGLGWIYLALDRNV-NGRPVVLK----GLVHSGDAEAQAMAMAERQFLAEVVHP 139
Query: 462 NIVKFYGFCSHPRHS-----FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANA 516
+IV+ + F H ++V E + SL + E + + + A
Sbjct: 140 SIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAE---AIA--YLLEILPA 194
Query: 517 LSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA---GTFGY 573
LSY+H +V+ D+ +N++L+ E + ++ D G + F GT G+
Sbjct: 195 LSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRI-------NSFGYLYGTPGF 243
Query: 574 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633
APE+ T T D+Y+ G + R+ + DP L
Sbjct: 244 QAPEIVRT-GPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPED----------DPVLK 292
Query: 634 LPSRNIQDKLISILEVALLCLEESPESRP 662
S + ++ P R
Sbjct: 293 TYD--------SYGRLLRRAIDPDPRQRF 313
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 3e-29
Identities = 61/244 (25%), Positives = 94/244 (38%), Gaps = 10/244 (4%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQI-PRSL 60
LS +P + +N + L L N++ +L L L++ N + QI +
Sbjct: 64 RGLS-EVPQGI--PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSI-RQIEVGAF 119
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWS-SWGKCQQLGTLNF 119
LASLN + L N LT S F L L + +N I S ++ + L L+
Sbjct: 120 NGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPI-ESIPSYAFNRVPSLMRLDL 178
Query: 120 SMNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPR 178
I L+ L L+ + I ++P L L L L ++GN P
Sbjct: 179 GELKKLEYISEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPG 236
Query: 179 VLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELD 238
LS L+ L + +++S L + LNL++N L L EL
Sbjct: 237 SFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELH 296
Query: 239 LSHN 242
L HN
Sbjct: 297 LHHN 300
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A Length = 452 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 5e-13
Identities = 32/144 (22%), Positives = 53/144 (36%), Gaps = 11/144 (7%)
Query: 161 SLNYLVLNGNKLS---GNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSN 217
+ +V LS +P S YL+L N + +T +L + L L
Sbjct: 55 QFSKVVCTRRGLSEVPQGIP------SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGR 108
Query: 218 NQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQI-CNLESLEKLNVSHNNLSGLIPSCF 276
N R+ L L+ L+L N+L IP L L +L + +N + + F
Sbjct: 109 NSIRQIEVGAFNGLASLNTLELFDNWLT-VIPSGAFEYLSKLRELWLRNNPIESIPSYAF 167
Query: 277 EGMHGLSCIDISYNELLGLIPNST 300
+ L +D+ + L I
Sbjct: 168 NRVPSLMRLDLGELKKLEYISEGA 191
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 4e-29
Identities = 66/261 (25%), Positives = 115/261 (44%), Gaps = 21/261 (8%)
Query: 408 QCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
+G G VY G +L + +A+K+ + + EI ++H+NIV++
Sbjct: 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIP---ERDSRYSQPLHEEIALHKHLKHKNIVQY 84
Query: 467 YGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF 525
G S + E + GSL+ +L S G +K+ + K + L Y+H +
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIG-FYTKQILEGLKYLHDNQ- 142
Query: 526 PPIVHRDISSKNVLLSSEY-EARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE--LAYTM 582
IVHRDI NVL+++ ++SDFG +K L + F GT Y+APE
Sbjct: 143 --IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR 200
Query: 583 KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDK 642
+ D++S G +E+ GK P F L ++ + + ++ P +P ++ +
Sbjct: 201 GYGKAADIWSLGCTIIEMATGKPP--FYELGEPQAAMFKVGMFKVH-PEIP---ESMSAE 254
Query: 643 LISILEVALLCLEESPESRPT 663
+ + L C E P+ R
Sbjct: 255 AKAFI---LKCFEPDPDKRAC 272
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 4e-29
Identities = 60/296 (20%), Positives = 115/296 (38%), Gaps = 38/296 (12%)
Query: 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
+ +G G A+V+RG +G++ A+K F+++ + E + L ++ H
Sbjct: 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR--PVDVQMREFEVLKKLNH 66
Query: 461 RNIVKFYGF--CSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALS 518
+NIVK + + RH L+ E GSL +L + V++ V ++
Sbjct: 67 KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSEYEAR----VSDFGIAKFLKPGSSNWTEFAGTFGYV 574
++ + IVHR+I N++ + + ++DFG A+ L+ + GT Y+
Sbjct: 127 HLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD-EQFVSLYGTEEYL 182
Query: 575 APEL--------AYTMKVTEKCDVYSFGVLALEVIKGK-------HPRDFISLL------ 613
P++ + K D++S GV G PR ++
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242
Query: 614 --SSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALL--CLEESPESRPTMQ 665
S + S + + N +D +P + + +L +L LE E
Sbjct: 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFD 298
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 5e-29
Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 42/276 (15%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
K F + IG G +VY ++ + EVVA+KK ++ + E++ L ++R
Sbjct: 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALS 518
H N +++ G ++LV E GS +++L + ++E I V L+
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQE-VEI--AAVTHGALQGLA 168
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL 578
Y+H ++HRD+ + N+LLS ++ DFG A + P +S F GT ++APE+
Sbjct: 169 YLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS----FVGTPYWMAPEV 221
Query: 579 AYTMKVTE---KCDVYSFGVLALEVIKGK------HPRDFISLLSSSSSNMNLSLNEILD 629
M + K DV+S G+ +E+ + K + + ++ + S
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES----------- 270
Query: 630 PRLPLP--SRNIQDKLISILEVALLCLEESPESRPT 663
P L S ++ + CL++ P+ RPT
Sbjct: 271 PALQSGHWSEYFRN-FVD------SCLQKIPQDRPT 299
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 6e-29
Identities = 56/278 (20%), Positives = 97/278 (34%), Gaps = 34/278 (12%)
Query: 399 RATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTE 457
++F +G G V++ G + AVK+ S R+ L E+ + +
Sbjct: 54 FFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARK-LAEVGSHEK 112
Query: 458 I-RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVAN 515
+ +H V+ +L E SL + G S+ E V ++
Sbjct: 113 VGQHPCCVRLEQAWEEGGILYLQTELCG-PSLQQHCEAWGASLPEA--QVW-GYLRDTLL 168
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVA 575
AL+++H +VH D+ N+ L ++ DFG+ L + G Y+A
Sbjct: 169 ALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEV-QEGDPRYMA 224
Query: 576 PEL---AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRL 632
PEL +Y DV+S G+ LEV L P
Sbjct: 225 PELLQGSY----GTAADVFSLGLTILEVACNMEL-------PHGGEGWQQLRQGYLPPEF 273
Query: 633 PLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
S ++ ++ + LE P+ R T + +
Sbjct: 274 TAGLSSELRS-VLV------MMLEPDPKLRATAEALLA 304
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 118 bits (296), Expect = 6e-29
Identities = 34/310 (10%), Positives = 78/310 (25%), Gaps = 43/310 (13%)
Query: 393 VYEEIIRATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNE 451
V + + + + + +G ++ V+ ++ E A+K F + S
Sbjct: 53 VDSLLSQGERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEA 112
Query: 452 IKALTEIRHRNIVKFYGFC------------SHPR--------------HSFLVYECLER 485
A + + + S P + L+
Sbjct: 113 TFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMP-AAS 171
Query: 486 GSLAEILSNDGSIKEF----SWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS 541
L + S + F + + + + + +VH + N+ +
Sbjct: 172 VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKG---LVHGHFTPDNLFIM 228
Query: 542 SEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL--AYTMKVTEKCDVYSFGVLALE 599
+ + D K G+ + Y E A T T + + G+
Sbjct: 229 PDGRLMLGDVSALW--KVGTRG-PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYR 285
Query: 600 VIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPE 659
V P ++ S D + D + +++ L
Sbjct: 286 VWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIG---RFLNFDRR 342
Query: 660 SRPTMQTVCQ 669
R +
Sbjct: 343 RRLLPLEAME 352
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 6e-29
Identities = 74/270 (27%), Positives = 121/270 (44%), Gaps = 27/270 (10%)
Query: 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
++F+ + +G G +VY E S ++A+K L + V+ + E++ + +RH
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 68
Query: 461 RNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM 520
NI++ YG+ +L+ E G++ L E T I +ANALSY
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDE--QRTAT-YITELANALSYC 125
Query: 521 HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAY 580
H ++HRDI +N+LL S E +++DFG + P S GT Y+ PE+
Sbjct: 126 HSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHA-PSSRRTD-LCGTLDYLPPEMIE 180
Query: 581 TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP---SR 637
EK D++S GVL E + GK P + ++ + I P +
Sbjct: 181 GRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFTFPDFVTE 232
Query: 638 NIQDKLISILEVALLCLEESPESRPTMQTV 667
+D LIS L L+ +P RP ++ V
Sbjct: 233 GARD-LISRL------LKHNPSQRPMLREV 255
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 6e-29
Identities = 53/275 (19%), Positives = 96/275 (34%), Gaps = 22/275 (8%)
Query: 13 GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRV--- 69
G + L +I + L L + ++ +I + ++ +
Sbjct: 41 GGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQEL 100
Query: 70 HLEQNHLTGNI--SEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGT----LNFSMNN 123
LE +TG + P+L L++ + ++ Q L L+ + +
Sbjct: 101 TLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAH 160
Query: 124 ITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIE----LGNLKSLNYLVLNGNK---LSGNL 176
++ L LD S N +GE + +L L L SG
Sbjct: 161 SLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVC 220
Query: 177 PRVLGSLSELEYLDLSTNKLSGSIPETLGNLL-KVHYLNLSNNQFRKEFPVELEKLVQLS 235
+ + +L+ LDLS N L + + +++ LNLS + + P L +LS
Sbjct: 221 SALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL--PAKLS 277
Query: 236 ELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSG 270
LDLS+N L P L + L++ N
Sbjct: 278 VLDLSYNRLDR--NPSPDELPQVGNLSLKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 85.3 bits (211), Expect = 3e-18
Identities = 44/219 (20%), Positives = 64/219 (29%), Gaps = 33/219 (15%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIGNLM--QLTNLEIDNNQL--FGQIPRSLRNL--ASLN 67
+ L+ L L + ++G+ P + L L + N L+ L
Sbjct: 93 GISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLK 152
Query: 68 RVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQ----QLGTLNFSMNN 123
+ + Q H E ++P L+ LD+S N GE C L L
Sbjct: 153 VLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAG 212
Query: 124 IT---GSIPPEIGKLYQLHKLDFSLNQIVGEIP-IELGNLKSLNYLVLNGNKLS---GNL 176
+ G QL LD S N + LN L L+ L L
Sbjct: 213 METPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGL 272
Query: 177 PRVL----------------GSLSELEYLDLSTNKLSGS 199
P L L ++ L L N S
Sbjct: 273 PAKLSVLDLSYNRLDRNPSPDELPQVGNLSLKGNPFLDS 311
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 84.6 bits (209), Expect = 5e-18
Identities = 40/235 (17%), Positives = 73/235 (31%), Gaps = 18/235 (7%)
Query: 82 EVFGIYPNLTFLDISHNNFYGEIW-SSWGKCQQLGTLNFSMNNITGSIPPEIGKLY---Q 137
E++G +L +L + + K L L I I ++
Sbjct: 37 ELYGGGRSLEYLLKRVDTEADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISG 96
Query: 138 LHKLDFSLNQIVGEIPIELGNL--KSLNYLVLNGNKLSGNLPRVLG----SLSELEYLDL 191
L +L ++ G P L LN L L + + L+ L +
Sbjct: 97 LQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSI 156
Query: 192 STNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVE----LEKLVQLSELDLSHNF---L 244
+ E + + L+LS+N E + K L L L +
Sbjct: 157 AQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETP 216
Query: 245 GGEIPPQICNLESLEKLNVSHNNLSGLIP-SCFEGMHGLSCIDISYNELLGLIPN 298
G L+ L++SHN+L + L+ +++S+ L +
Sbjct: 217 SGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKG 271
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 83.0 bits (205), Expect = 1e-17
Identities = 38/188 (20%), Positives = 68/188 (36%), Gaps = 16/188 (8%)
Query: 129 PPEIGKLYQLHKLDFSLNQIVGEIP---IELGNLKSLNYLVLNGNKLSGNLPRVLGSLS- 184
+I K L +L +I I + + + L L L +++G P L +
Sbjct: 61 FTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATG 120
Query: 185 -ELEYLDLSTNKLSG--SIPETLGNLLKVH--YLNLSNNQFRKEFPVELEKLVQLSELDL 239
+L L+L + + L LK L+++ ++ LS LDL
Sbjct: 121 PDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDL 180
Query: 240 SHNFLGGEIP--PQIC--NLESLEKLNVSHNN---LSGLIPSCFEGMHGLSCIDISYNEL 292
S N GE +C +L+ L + + SG+ + L +D+S+N L
Sbjct: 181 SDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSL 240
Query: 293 LGLIPNST 300
+
Sbjct: 241 RDAAGAPS 248
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 70.3 bits (172), Expect = 2e-13
Identities = 37/174 (21%), Positives = 52/174 (29%), Gaps = 23/174 (13%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
H V F L L L N G + + P
Sbjct: 159 AHSLNFSCEQVRVFPALSTLDLSDNPELG-----------------ERGLISALCPLKFP 201
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEI-WSSWGKCQQLGTLNFS 120
L L + +G S + L LD+SHN+ S QL +LN S
Sbjct: 202 TLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLS 261
Query: 121 MNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSG 174
+ +P + +L LD S N++ P L + L L GN
Sbjct: 262 FTGLK-QVPKGLPA--KLSVLDLSYNRL-DRNPSPDE-LPQVGNLSLKGNPFLD 310
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 63.0 bits (153), Expect = 6e-11
Identities = 36/181 (19%), Positives = 63/181 (34%), Gaps = 13/181 (7%)
Query: 143 FSLNQIVGEIPIEL-GNLKSLNYLVL--NGNKLSGNLPRVLGSLSELEYLDLSTNKLSGS 199
S +G +EL G +SL YL+ + G ++ SLS L+ L + ++
Sbjct: 25 SSAFNCLGAADVELYGGGRSLEYLLKRVDTEADLGQFTDIIKSLS-LKRLTVRAARIPSR 83
Query: 200 IPETLGNLL---KVHYLNLSNNQFRKEFPVELEKLV--QLSELDLSHNFLGGEIPP---- 250
I +L + L L N + P L + L+ L+L +
Sbjct: 84 ILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAEL 143
Query: 251 QICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQAL 310
Q L+ L+++ + LS +D+S N LG + L
Sbjct: 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTL 203
Query: 311 R 311
+
Sbjct: 204 Q 204
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} Length = 312 | Back alignment and structure |
|---|
Score = 48.7 bits (116), Expect = 3e-06
Identities = 25/104 (24%), Positives = 33/104 (31%), Gaps = 12/104 (11%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQ-LTNLEIDNNQL---FGQI 56
M SG L+GL L NSL + + L +L + L +
Sbjct: 213 METPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGL 272
Query: 57 PRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNF 100
P L L L N L N S P + L + N F
Sbjct: 273 PAKLSVL------DLSYNRLDRNPSPDE--LPQVGNLSLKGNPF 308
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 1e-28
Identities = 71/292 (24%), Positives = 119/292 (40%), Gaps = 52/292 (17%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKAL 455
I Q IG G V+ G + + VA+K + + +F+ E + +
Sbjct: 4 VIDP--SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKT----IREGAMSEEDFIEEAEVM 57
Query: 456 TEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVAN 515
++ H +V+ YG C LV E +E G L++ L F+ + V
Sbjct: 58 MKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRG--LFAAETLLGMCLDVCE 115
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL-------KPGSS---NWT 565
++Y+ C +HRD++++N L+ +VSDFG+ +F+ G+ W
Sbjct: 116 GMAYLEEACV---IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA 172
Query: 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSL 624
+PE+ + + K DV+SFGVL EV +GK P + N S
Sbjct: 173 ---------SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE------------NRSN 211
Query: 625 NEILDP-----RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+E+++ RL P R + I+ C E PE RP + + L
Sbjct: 212 SEVVEDISTGFRLYKP-RLASTHVYQIM---NHCWRERPEDRPAFSRLLRQL 259
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 114 bits (289), Expect = 1e-28
Identities = 68/278 (24%), Positives = 112/278 (40%), Gaps = 48/278 (17%)
Query: 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
Q IG G V G+ G VAVK + + + FL E +T++RH N+V+
Sbjct: 26 LQTIGKGEFGDVMLGDY-RGNKVAVKC-----IKNDATAQAFLAEASVMTQLRHSNLVQL 79
Query: 467 YGFCSHPRHS-FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF 525
G + ++V E + +GSL + L + G V A+ Y+ + F
Sbjct: 80 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGNNF 138
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN------WTEFAGTFGYVAPELA 579
VHRD++++NVL+S + A+VSDFG+ K WT APE
Sbjct: 139 ---VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT---------APEAL 186
Query: 580 YTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDP-----RLP 633
K + K DV+SFG+L E+ G+ P + L +++ ++
Sbjct: 187 REKKFSTKSDVWSFGILLWEIYSFGRVPYP------------RIPLKDVVPRVEKGYKMD 234
Query: 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
P + ++ C RP+ + + L
Sbjct: 235 AP-DGCPPAVYEVM---KNCWHLDAAMRPSFLQLREQL 268
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 2e-28
Identities = 61/308 (19%), Positives = 110/308 (35%), Gaps = 33/308 (10%)
Query: 16 TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPR-SLRNLASLNRVHLEQN 74
++ + L NS++ L L L+++ I + R L+SL + L+ N
Sbjct: 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYN 89
Query: 75 HLTGNISEVFGIYPNLTFLDISHNNFYGEI--WSSWGKCQQLGTLNFSMNNITGSIPPEI 132
+ F NL L ++ N G + + + L L NNI I P
Sbjct: 90 QFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIK-KIQPAS 148
Query: 133 --GKLYQLHKLDFSLNQI----------VGEIPIELGNLKSLNYLVLNGNKLSGNLPRVL 180
+ + H LD + N++ L L S+ +N L
Sbjct: 149 FFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNP 208
Query: 181 GSLSELEYLDLSTNKLSGSIPE---TLGNLLKVHYLNLSN----------NQFRKEFPVE 227
+ + LDLS N S+ + K+ L LSN F+
Sbjct: 209 FKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFT 268
Query: 228 LEKLV--QLSELDLSHNFLGGEIPPQIC-NLESLEKLNVSHNNLSGLIPSCFEGMHGLSC 284
+ L + DLS + + + + + LE+L ++ N ++ + + F G+ L
Sbjct: 269 FKGLEASGVKTCDLSKSKI-FALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLK 327
Query: 285 IDISYNEL 292
+++S N L
Sbjct: 328 LNLSQNFL 335
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 2e-28
Identities = 68/321 (21%), Positives = 111/321 (34%), Gaps = 36/321 (11%)
Query: 2 NHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSV--PGEIGNLMQLTNLEIDNNQLFGQIPR 58
N + NL+ L L +L G+V L L L + +N + P
Sbjct: 89 NQFL-QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPA 147
Query: 59 SL-RNLASLNRVHLEQNHLTGNISEVFG--IYPNLTFLDISHNNFY--GEIWSSWGKC-- 111
S N+ + + L N + E + T L +S E W W KC
Sbjct: 148 SFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGN 207
Query: 112 ----QQLGTLNFSMNNITGSIPPEIGKLYQLHKL-------------DFSLNQIVGEIPI 154
+ TL+ S N S+ K+ F
Sbjct: 208 PFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNF 267
Query: 155 ELGNLK--SLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVH 211
L+ + L+ +K+ L V ++LE L L+ N+++ I + L +
Sbjct: 268 TFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEIN-KIDDNAFWGLTHLL 326
Query: 212 YLNLSNNQFRKEFPVEL-EKLVQLSELDLSHNFLGGEIPPQI-CNLESLEKLNVSHNNLS 269
LNLS N + E L +L LDLS+N + + Q L +L++L + N L
Sbjct: 327 KLNLSQNFL-GSIDSRMFENLDKLEVLDLSYNHIR-ALGDQSFLGLPNLKELALDTNQLK 384
Query: 270 GLIPSCFEGMHGLSCIDISYN 290
+ F+ + L I + N
Sbjct: 385 SVPDGIFDRLTSLQKIWLHTN 405
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 99.4 bits (248), Expect = 3e-22
Identities = 67/320 (20%), Positives = 110/320 (34%), Gaps = 48/320 (15%)
Query: 2 NHL-SGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEI-GNLMQLTNLEIDNNQL------ 52
+L + + T+L+ L L N++ P N+ + L++ N++
Sbjct: 113 CNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEE 172
Query: 53 ----FGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNN--------F 100
F +L L+S+ + + L ++T LD+S N F
Sbjct: 173 DLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRF 232
Query: 101 YGEIWSS-----WGKCQQLGTLNFSMNNITGSIPPEIGKLY--QLHKLDFSLNQIVGEIP 153
+ I + +F N L + D S ++I +
Sbjct: 233 FDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKI-FALL 291
Query: 154 IEL-GNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVH 211
+ + L L L N+++ L+ L L+LS N L SI NL K+
Sbjct: 292 KSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLG-SIDSRMFENLDKLE 350
Query: 212 YLNLSNNQFRKEFPVEL-EKLVQLSELDLSHNFLGGEIPPQI-CNLESLEKLNVSHNNLS 269
L+LS N + + L L EL L N L +P I L SL+K+ + N
Sbjct: 351 VLDLSYNHI-RALGDQSFLGLPNLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPW- 407
Query: 270 GLIPSCFEGMHGLSCIDISY 289
C SC I Y
Sbjct: 408 ----DC-------SCPRIDY 416
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* Length = 455 | Back alignment and structure |
|---|
Score = 91.7 bits (228), Expect = 8e-20
Identities = 36/198 (18%), Positives = 64/198 (32%), Gaps = 18/198 (9%)
Query: 116 TLNFSMNNITGSIPPE-IGKLYQLHKLDFSLNQIVGEIPIEL-GNLKSLNYLVLNGNKLS 173
++ S+N+I + +L L L I L SL L L+ N+
Sbjct: 34 YVDLSLNSIA-ELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFL 92
Query: 174 GNLPRVLGSLSELEYLDLSTNKL-SGSIPE-TLGNLLKVHYLNLSNNQFRKEFPVEL-EK 230
L+ LE L L+ L + L + L L +N +K P
Sbjct: 93 QLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLN 152
Query: 231 LVQLSELDLSHNFLGGEIPPQI-----------CNLESLEKLNVSHNNLSGLIPSCFEGM 279
+ + LDL+ N + I + L S+ +++ L
Sbjct: 153 MRRFHVLDLTFNKV-KSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKN 211
Query: 280 HGLSCIDISYNELLGLIP 297
++ +D+S N +
Sbjct: 212 TSITTLDLSGNGFKESMA 229
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 2e-28
Identities = 65/277 (23%), Positives = 113/277 (40%), Gaps = 36/277 (12%)
Query: 407 EQCIGIGGQASVYRGEL--PSGEV-VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNI 463
++ +G G +V +G VAVK + +++ E L E + ++ + I
Sbjct: 22 DKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP-ALKDELLAEANVMQQLDNPYI 80
Query: 464 VKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHD 523
V+ G C LV E E G L + L + + ++ V+ + Y+
Sbjct: 81 VRMIGICEAESW-MLVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES 136
Query: 524 CFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT---FGYVAPELAY 580
F VHRD++++NVLL +++ A++SDFG++K L+ + + + APE
Sbjct: 137 NF---VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 193
Query: 581 TMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDP-----RLPL 634
K + K DV+SFGVL E G+ P + +E+ R+
Sbjct: 194 YYKFSSKSDVWSFGVLMWEAFSYGQKPYR------------GMKGSEVTAMLEKGERMGC 241
Query: 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
P + ++ LC E+RP V L
Sbjct: 242 P----AGCPREMYDLMNLCWTYDVENRPGFAAVELRL 274
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 2e-28
Identities = 75/292 (25%), Positives = 128/292 (43%), Gaps = 50/292 (17%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI- 458
F+ + +G G VY+G + +G++ A+K + E E EI L +
Sbjct: 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVM-DVTGDEEE---EIKQEINMLKKYS 78
Query: 459 RHRNIVKFYG------FCSHPRHSFLVYECLERGSLAEILSN--DGSIKEFSWIVRTNVI 510
HRNI +YG +LV E GS+ +++ N ++KE WI +
Sbjct: 79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE-EWI--AYIC 135
Query: 511 KSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT 570
+ + LS++H ++HRDI +NVLL+ E ++ DFG++ L F GT
Sbjct: 136 REILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGT 192
Query: 571 FGYVAPELAYTMKVTE-----KCDVYSFGVLALEVIKGK------HPRDFISLLSSSSSN 619
++APE+ + + K D++S G+ A+E+ +G HP + L+ + +
Sbjct: 193 PYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPA- 251
Query: 620 MNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
PR L S+ K S +E CL ++ RP + QL+
Sbjct: 252 ----------PR--LKSKKWSKKFQSFIE---SCLVKNHSQRPATE---QLM 285
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 2e-28
Identities = 56/243 (23%), Positives = 92/243 (37%), Gaps = 8/243 (3%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
+L +P + TN + L L+ N + +L L L++ N + +
Sbjct: 53 KNLR-EVPDGI--STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFN 109
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEI-WSSWGKCQQLGTLNFS 120
LA+LN + L N LT + F L L + +N I ++ + L L+
Sbjct: 110 GLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPI-ESIPSYAFNRIPSLRRLDLG 168
Query: 121 MNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRV 179
I L L L+ ++ + EIP L L L+ L L+GN LS P
Sbjct: 169 ELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGS 226
Query: 180 LGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDL 239
L L+ L + +++ NL + +NL++N L L + L
Sbjct: 227 FQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHL 286
Query: 240 SHN 242
HN
Sbjct: 287 HHN 289
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 93.3 bits (232), Expect = 3e-20
Identities = 48/192 (25%), Positives = 72/192 (37%), Gaps = 9/192 (4%)
Query: 111 CQ-QLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNG 169
C Q + N+ +P I L+ NQI +L+ L L L+
Sbjct: 41 CSNQFSKVICVRKNLR-EVPDGI--STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSR 97
Query: 170 NKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQFRKEFPVEL 228
N + L+ L L+L N+L+ +IP L K+ L L NN
Sbjct: 98 NHIRTIEIGAFNGLANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAF 156
Query: 229 EKLVQLSELDLSHNFLGGEIPPQI-CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDI 287
++ L LDL I L +L LN++ NL IP+ + L +D+
Sbjct: 157 NRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPN-LTPLIKLDELDL 214
Query: 288 SYNELLGLIPNS 299
S N L + P S
Sbjct: 215 SGNHLSAIRPGS 226
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 440 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 1e-12
Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 2/118 (1%)
Query: 184 SELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNF 243
+ L+L N++ + +L + L LS N R L L+ L+L N
Sbjct: 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNR 123
Query: 244 LGGEIPPQI-CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNST 300
L IP L L++L + +N + + F + L +D+ + L I
Sbjct: 124 LT-TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGA 180
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 2e-28
Identities = 74/292 (25%), Positives = 122/292 (41%), Gaps = 52/292 (17%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKAL 455
E+ R + + +G G V G+ VAVK +SE EF E + +
Sbjct: 4 ELKR--EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSE----DEFFQEAQTM 57
Query: 456 TEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVAN 515
++ H +VKFYG CS ++V E + G L L + G K + V
Sbjct: 58 MKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHG--KGLEPSQLLEMCYDVCE 115
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL-------KPGSS---NWT 565
++++ F +HRD++++N L+ + +VSDFG+ +++ G+ W+
Sbjct: 116 GMAFLESHQF---IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWS 172
Query: 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSL 624
APE+ + K + K DV++FG+L EV GK P D +
Sbjct: 173 ---------APEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD------------LYTN 211
Query: 625 NEILDP-----RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+E++ RL P D + I+ C E PE RPT Q + +
Sbjct: 212 SEVVLKVSQGHRLYRP-HLASDTIYQIM---YSCWHELPEKRPTFQQLLSSI 259
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 2e-28
Identities = 69/278 (24%), Positives = 112/278 (40%), Gaps = 48/278 (17%)
Query: 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
Q IG G V G+ G VAVK + + + FL E +T++RH N+V+
Sbjct: 198 LQTIGKGEFGDVMLGDY-RGNKVAVKC-----IKNDATAQAFLAEASVMTQLRHSNLVQL 251
Query: 467 YGFCSHPRHSF-LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF 525
G + +V E + +GSL + L + G V A+ Y+ + F
Sbjct: 252 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGNNF 310
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN------WTEFAGTFGYVAPELA 579
VHRD++++NVL+S + A+VSDFG+ K WT APE
Sbjct: 311 ---VHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT---------APEAL 358
Query: 580 YTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDP-----RLP 633
K + K DV+SFG+L E+ G+ P + L +++ ++
Sbjct: 359 REKKFSTKSDVWSFGILLWEIYSFGRVPYP------------RIPLKDVVPRVEKGYKMD 406
Query: 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
P + ++ C +RPT + + L
Sbjct: 407 AP-DGCPPAVYDVM---KNCWHLDAATRPTFLQLREQL 440
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 3e-28
Identities = 68/294 (23%), Positives = 120/294 (40%), Gaps = 28/294 (9%)
Query: 8 IPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNL---MQLTNLEIDNNQLFGQI-----PRS 59
I + L L L + + + I L + I N +L GQ+ S
Sbjct: 212 ILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYS 271
Query: 60 LRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNF 119
+L +L+ + + S ++ I+ N+ + + + K L+F
Sbjct: 272 GTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDF 331
Query: 120 SMNNITGSIPPEIGKLYQLHKLDFSLNQI--VGEIPIELGNLKSLNYLVLNGNKLSGNLP 177
S N +T ++ G L +L L +NQ+ + +I +KSL L ++ N +S +
Sbjct: 332 SNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEK 391
Query: 178 R-VLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSE 236
+ L L++S+N L+ +I L +K L+L +N+ K P ++ KL L E
Sbjct: 392 KGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIK--VLDLHSNKI-KSIPKQVVKLEALQE 448
Query: 237 LDLSHNFLGGEIPPQIC-NLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISY 289
L+++ N L +P I L SL+K+ + N C SC I Y
Sbjct: 449 LNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPW-----DC-------SCPRIDY 489
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 99.2 bits (247), Expect = 6e-22
Identities = 51/310 (16%), Positives = 91/310 (29%), Gaps = 24/310 (7%)
Query: 13 GNFTNLKGLYLYSNSL-SGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHL 71
NLK L L N+ + + E GN+ QL L + L + +L + +
Sbjct: 87 HPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLV 146
Query: 72 EQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITG----- 126
+ + + + N ++NI
Sbjct: 147 LGETYGEKED--PEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDN 204
Query: 127 ------SIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLK--------SLNYLVLNGNKL 172
SI ++ +L L + + I + L S++ + L G
Sbjct: 205 KCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLD 264
Query: 173 SGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLV 232
+ SL L + ++ ++ N + + R + K+
Sbjct: 265 FRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKIS 324
Query: 233 QLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGL--IPSCFEGMHGLSCIDISYN 290
LD S+N L + +L LE L + N L L I M L +DIS N
Sbjct: 325 PFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQN 384
Query: 291 ELLGLIPNST 300
+
Sbjct: 385 SVSYDEKKGD 394
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 85.7 bits (212), Expect = 1e-17
Identities = 56/336 (16%), Positives = 96/336 (28%), Gaps = 51/336 (15%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
+P L + N +S +I +L +L L I +N++ + L
Sbjct: 14 HVPK--DLSQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQEL 71
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYG-EIWSSWGKCQQLGTLNFSMNNIT 125
+ L N L IS NL LD+S N F I +G QL L S ++
Sbjct: 72 EYLDLSHNKLV-KIS--CHPTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLE 128
Query: 126 GSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVL----- 180
S I L L + L+ N L+ + +
Sbjct: 129 KSSVLPIAHLNISKVLLVLGETYG--EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSV 186
Query: 181 GSLSELEYLDLSTNKLSGSIPETLGNLLK------------------------------- 209
+++ LE ++ L L K
Sbjct: 187 KTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWH 246
Query: 210 --VHYLNLSNNQFRK-----EFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLN 262
V Y ++SN + + +F L LS + + G ++ N
Sbjct: 247 TTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKN 306
Query: 263 VSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPN 298
+ + + C + +D S N L +
Sbjct: 307 FTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFE 342
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 83.4 bits (206), Expect = 6e-17
Identities = 50/333 (15%), Positives = 99/333 (29%), Gaps = 45/333 (13%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N++S + + + L+ L + N + +L L++ +N+L
Sbjct: 31 NYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCHPTV 90
Query: 62 NLASLNRVHLEQNHLTG-NISEVFGIYPNLTFLDISHNNF-------------------- 100
NL L+ L N I + FG L FL +S +
Sbjct: 91 NLKHLD---LSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVL 147
Query: 101 --YGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVG-------- 150
Q T + + T I + + L+ I
Sbjct: 148 GETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCS 207
Query: 151 ---EIPIELGNLKSLNYLVLNGNKLSGNLPR---VLGSLSELEYLDLSTNKLSG-----S 199
I +L L+ L LN + + N L + + Y +S KL G
Sbjct: 208 YFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRD 267
Query: 200 IPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLE 259
+ +L + + ++ F E ++ + + + +
Sbjct: 268 FDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFL 327
Query: 260 KLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
L+ S+N L+ + + L + + N+L
Sbjct: 328 HLDFSNNLLTDTVFENCGHLTELETLILQMNQL 360
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 81.1 bits (200), Expect = 3e-16
Identities = 45/196 (22%), Positives = 81/196 (41%), Gaps = 28/196 (14%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
++ + L +N L+ +V G+L +L L + NQ
Sbjct: 309 VSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQ--------- 359
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNF-YGEIWSSWGKCQQLGTLNF 119
L L+++ +E+ +L LDIS N+ Y E + L +LN
Sbjct: 360 --LKELSKI-----------AEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNM 406
Query: 120 SMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPR- 178
S N +T +I + ++ LD N+I IP ++ L++L L + N+L ++P
Sbjct: 407 SSNILTDTIFRCL--PPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDG 462
Query: 179 VLGSLSELEYLDLSTN 194
+ L+ L+ + L TN
Sbjct: 463 IFDRLTSLQKIWLHTN 478
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 79.9 bits (197), Expect = 8e-16
Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 9/155 (5%)
Query: 116 TLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175
++ S N + +P ++ + + L+ S N I ++ +L L L+++ N++
Sbjct: 4 LVDRSKNGLI-HVPKDLSQ--KTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYL 60
Query: 176 LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPV--ELEKLVQ 233
V ELEYLDLS NKL I + + +L+LS N F P+ E + Q
Sbjct: 61 DISVFKFNQELEYLDLSHNKLV-KIS--CHPTVNLKHLDLSFNAF-DALPICKEFGNMSQ 116
Query: 234 LSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNL 268
L L LS L I +L + L V
Sbjct: 117 LKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETY 151
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 76.1 bits (187), Expect = 1e-14
Identities = 48/291 (16%), Positives = 92/291 (31%), Gaps = 30/291 (10%)
Query: 23 LYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISE 82
N L VP ++ + T L I N + + +L+ L + + N +
Sbjct: 7 RSKNGLI-HVPKDLSQ--KTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDIS 63
Query: 83 VFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPP--EIGKLYQLHK 140
VF L +LD+SHN S L L+ S N ++P E G + QL
Sbjct: 64 VFKFNQELEYLDLSHNKLVK---ISCHPTVNLKHLDLSFNAFD-ALPICKEFGNMSQLKF 119
Query: 141 LDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSI 200
L S + + + +L L++ G L + L +
Sbjct: 120 LGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKED--PEGLQDFNTESLHIVFPTNKE 177
Query: 201 PETL-----GNLLKVHYLNLSNN------QFRKEFPVELEKLVQLSELDLSHNFLGGEIP 249
+ + + N+ + +L+ +LS L L++
Sbjct: 178 FHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSF 237
Query: 250 PQI---CNLESLEKLNVSHNNLSGLIPS-----CFEGMHGLSCIDISYNEL 292
+I ++ ++S+ L G + + LS + +
Sbjct: 238 IRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF 288
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} Length = 520 | Back alignment and structure |
|---|
Score = 75.3 bits (185), Expect = 2e-14
Identities = 34/157 (21%), Positives = 61/157 (38%), Gaps = 7/157 (4%)
Query: 160 KSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQ 219
+ L ++ N +S + SLS+L L +S N++ ++ YL+LS+N+
Sbjct: 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80
Query: 220 FRKEFPVELEKLVQLSELDLSHNFLGGEIPPQ--ICNLESLEKLNVSHNNLSGLIPSCFE 277
K + V L LDLS N +P N+ L+ L +S +L
Sbjct: 81 LVK---ISCHPTVNLKHLDLSFNAF-DALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIA 136
Query: 278 GMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNR 314
++ + + E G + G Q ++L
Sbjct: 137 HLNIS-KVLLVLGETYGEKEDPEGLQDFNTESLHIVF 172
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 3e-28
Identities = 64/274 (23%), Positives = 112/274 (40%), Gaps = 36/274 (13%)
Query: 410 IGIGGQASVYRGEL--PSGEV-VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
+G G SV +G ++ VA+K +E + E + E + + ++ + IV+
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIVRL 75
Query: 467 YGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFP 526
G C LV E G L + L +E ++ V+ + Y+ F
Sbjct: 76 IGVCQAEAL-MLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEKNF- 131
Query: 527 PIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT---FGYVAPELAYTMK 583
VHRD++++NVLL + + A++SDFG++K L S +T + + APE K
Sbjct: 132 --VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 189
Query: 584 VTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDP-----RLPLPSR 637
+ + DV+S+GV E + G+ P + E++ R+ P
Sbjct: 190 FSSRSDVWSYGVTMWEALSYGQKPYK------------KMKGPEVMAFIEQGKRMECP-- 235
Query: 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ + + C E RP TV Q +
Sbjct: 236 --PECPPELYALMSDCWIYKWEDRPDFLTVEQRM 267
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 3e-28
Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 26/273 (9%)
Query: 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
++F +G G A VYR + +G VA+K + + + + NE+K +++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 461 RNIVKFYGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSY 519
+I++ Y + + +LV E G + L + E R + + + Y
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSE--NEARH-FMHQIITGMLY 127
Query: 520 MHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELA 579
+H I+HRD++ N+LL+ +++DFG+A LK GT Y++PE+A
Sbjct: 128 LHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIA 184
Query: 580 YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP---S 636
+ DV+S G + ++ G+ P D + + +LN+++ +P S
Sbjct: 185 TRSAHGLESDVWSLGCMFYTLLIGRPPFD--------TDTVKNTLNKVVLADYEMPSFLS 236
Query: 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
+D LI L L +P R ++ +V
Sbjct: 237 IEAKD-LIHQL------LRRNPADRLSLSSVLD 262
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 4e-28
Identities = 59/288 (20%), Positives = 109/288 (37%), Gaps = 52/288 (18%)
Query: 404 FDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKAL-TEIRHR 461
+ +G G V++ +G V+AVK+ + L ++ +
Sbjct: 27 LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMR--RSGNKEENKRILMDLDVVLKSHDCP 84
Query: 462 NIVKFYGFCSHPRHSFL----VYECLE---RGSLAEILSNDGSIKEFSWIVRTNVIKSVA 514
IV+ +G +F+ V+ +E + G I E + + + ++
Sbjct: 85 YIVQCFG-------TFITNTDVFIAMELMGTCAEKLKKRMQGPIPE-RILGK--MTVAIV 134
Query: 515 NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYV 574
AL Y+ ++HRD+ N+LL + ++ DFGI+ L AG Y+
Sbjct: 135 KALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLV-DDKAKDRSAGCAAYM 191
Query: 575 APELAYTMKVTE-----KCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD 629
APE T+ + DV+S G+ +E+ G+ P + ++ + L ++L
Sbjct: 192 APERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP------YKNCKTDFEV-LTKVLQ 244
Query: 630 ---PRLPLP---SRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
P LP S + Q + CL + RP +LL
Sbjct: 245 EEPPLLPGHMGFSGDFQS-FVK------DCLTKDHRKRPKYN---KLL 282
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 6e-28
Identities = 49/209 (23%), Positives = 98/209 (46%), Gaps = 31/209 (14%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
T+ + + +G G + V R ++ +G+ A ++ LS Q+ E + ++
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQK-LEREARICRLLK 68
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVR---------TNVI 510
H NIV+ + S H +L+++ + G L F IV ++ I
Sbjct: 69 HPNIVRLHDSISEEGHHYLIFDLVTGGEL------------FEDIVAREYYSEADASHCI 116
Query: 511 KSVANALSYMH-HDCFPPIVHRDISSKNVLLSSEYEA---RVSDFGIAKFLKPGSSNWTE 566
+ + A+ + H +VHR++ +N+LL+S+ + +++DFG+A ++ W
Sbjct: 117 QQILEAVLHCHQMG----VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG 172
Query: 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGV 595
FAGT GY++PE+ + D+++ GV
Sbjct: 173 FAGTPGYLSPEVLRKDPYGKPVDLWACGV 201
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 7e-28
Identities = 72/298 (24%), Positives = 121/298 (40%), Gaps = 56/298 (18%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRGEL---PSGEV-VAVKKFHSLLLSEISVQREFLNE 451
EI E+ IG G V G L +V VA+K + +R+FL+E
Sbjct: 45 EIEA--SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTER--QRRDFLSE 100
Query: 452 IKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIK 511
+ + H NI++ G + R + +V E +E GSL L +F+ + +++
Sbjct: 101 ASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLR 158
Query: 512 SVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN-------- 563
V + Y+ + VHRD++++NVL+ S +VSDFG+++ L+
Sbjct: 159 GVGAGMRYLSDLGY---VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGK 215
Query: 564 ----WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSS 618
WT APE + DV+SFGV+ EV+ G+ P
Sbjct: 216 IPIRWT---------APEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW---------- 256
Query: 619 NMNLSLNEILDP-----RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
N++ +++ RLP P L ++ L C + RP + +L
Sbjct: 257 --NMTNRDVISSVEEGYRLPAP-MGCPHALHQLM---LDCWHKDRAQRPRFSQIVSVL 308
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 8e-28
Identities = 70/292 (23%), Positives = 121/292 (41%), Gaps = 52/292 (17%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKAL 455
EI K+ + +G G V G+ VA+K +SE EF+ E K +
Sbjct: 20 EIDP--KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE----DEFIEEAKVM 73
Query: 456 TEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVAN 515
+ H +V+ YG C+ R F++ E + G L L F + K V
Sbjct: 74 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH--RFQTQQLLEMCKDVCE 131
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL-------KPGSS---NWT 565
A+ Y+ F +HRD++++N L++ + +VSDFG+++++ GS W+
Sbjct: 132 AMEYLESKQF---LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS 188
Query: 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSL 624
PE+ K + K D+++FGVL E+ GK P + +
Sbjct: 189 ---------PPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE------------RFTN 227
Query: 625 NEILDP-----RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+E + RL P +K+ +I+ C E + RPT + + +
Sbjct: 228 SETAEHIAQGLRLYRP-HLASEKVYTIM---YSCWHEKADERPTFKILLSNI 275
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 1e-27
Identities = 69/295 (23%), Positives = 114/295 (38%), Gaps = 54/295 (18%)
Query: 407 EQCIGIGGQASVYRGELP-----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
+G G SV +G +VAVK+ L S QR+F EI+ L +
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQ---LQHSGPDQQRDFQREIQILKALHSD 84
Query: 462 NIVKFYGFCSHPRHS--FLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALS 518
IVK+ G P LV E L G L + L + + + + +
Sbjct: 85 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL---LYSSQICKGME 141
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS------------NWTE 566
Y+ VHRD++++N+L+ SE +++DFG+AK L W
Sbjct: 142 YLGSRRC---VHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY- 197
Query: 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHP----RDFISLLSSSSSNMN 621
APE + + DV+SFGV+ E+ +F+ ++
Sbjct: 198 --------APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVP- 248
Query: 622 LSLNEILDP-----RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+L+ +L+ RLP P ++ ++ LC SP+ RP+ + L
Sbjct: 249 -ALSRLLELLEEGQRLPAP-PACPAEVHELM---KLCWAPSPQDRPSFSALGPQL 298
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 1e-27
Identities = 64/274 (23%), Positives = 120/274 (43%), Gaps = 34/274 (12%)
Query: 407 EQCIGIGGQASVYRGELPSGEV-VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVK 465
+ +G G VY G + VAVK L + EFL E + EI+H N+V+
Sbjct: 225 KHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKHPNLVQ 280
Query: 466 FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF 525
G C+ +++ E + G+L + L +E S +V + +++A+ Y+ F
Sbjct: 281 LLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNF 339
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGY--VAPELAYTMK 583
+HR+++++N L+ + +V+DFG+++ + G + F APE K
Sbjct: 340 ---IHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 395
Query: 584 VTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDP-----RLPLPSR 637
+ K DV++FGVL E+ G P + L+++ + R+ P
Sbjct: 396 FSIKSDVWAFGVLLWEIATYGMSPYP------------GIDLSQVYELLEKDYRMERP-E 442
Query: 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+K+ ++ C + +P RP+ + Q
Sbjct: 443 GCPEKVYELM---RACWQWNPSDRPSFAEIHQAF 473
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 1e-27
Identities = 66/302 (21%), Positives = 113/302 (37%), Gaps = 40/302 (13%)
Query: 399 RATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTE 457
+ ++ ++ +G GG V R +GE VA+K+ L + + +R + EI+ + +
Sbjct: 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPK-NRER-WCLEIQIMKK 68
Query: 458 IRHRNIVKFY------GFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIK 511
+ H N+V + L E E G L + L+ + ++
Sbjct: 69 LNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 128
Query: 512 SVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEAR---VSDFGIAKFLKPGSSNWTEFA 568
+++AL Y+H + I+HRD+ +N++L + + D G AK L G F
Sbjct: 129 DISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE-FV 184
Query: 569 GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP------------------RDFI 610
GT Y+APEL K T D +SFG LA E I G P + I
Sbjct: 185 GTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHI 244
Query: 611 SLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670
+ + + S L ++ + + L R T +
Sbjct: 245 VVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCM------LMWHQRQRGTDPQNPNV 298
Query: 671 LC 672
C
Sbjct: 299 GC 300
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 1e-27
Identities = 63/277 (22%), Positives = 113/277 (40%), Gaps = 36/277 (12%)
Query: 407 EQCIGIGGQASVYRGEL--PSGEV-VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNI 463
+ +G G SV +G ++ VA+K +E + E + E + + ++ + I
Sbjct: 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYI 398
Query: 464 VKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHD 523
V+ G C LV E G L + L +E ++ V+ + Y+
Sbjct: 399 VRLIGVCQAEAL-MLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK 455
Query: 524 CFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT---FGYVAPELAY 580
F VHR+++++NVLL + + A++SDFG++K L S +T + + APE
Sbjct: 456 NF---VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN 512
Query: 581 TMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDP-----RLPL 634
K + + DV+S+GV E + G+ P + E++ R+
Sbjct: 513 FRKFSSRSDVWSYGVTMWEALSYGQKPYK------------KMKGPEVMAFIEQGKRMEC 560
Query: 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
P + + + C E RP TV Q +
Sbjct: 561 P----PECPPELYALMSDCWIYKWEDRPDFLTVEQRM 593
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 1e-27
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 35/209 (16%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
K F + +G G + V+ + +G++ A+K NEI L +I+
Sbjct: 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR---DSSLENEIAVLKKIK 64
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVR---------TNVI 510
H NIV H +LV + + G L F I+ + VI
Sbjct: 65 HENIVTLEDIYESTTHYYLVMQLVSGGEL------------FDRILERGVYTEKDASLVI 112
Query: 511 KSVANALSYMH-HDCFPPIVHRDISSKNVLLSSEYEA---RVSDFGIAKFLKPGSSNWTE 566
+ V +A+ Y+H + IVHRD+ +N+L + E ++DFG++K + G +
Sbjct: 113 QQVLSAVKYLHENG----IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI--MST 166
Query: 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGV 595
GT GYVAPE+ ++ D +S GV
Sbjct: 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGV 195
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 2e-27
Identities = 68/293 (23%), Positives = 115/293 (39%), Gaps = 49/293 (16%)
Query: 407 EQCIGIGGQASVYRGELP-----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
+ +G G V +GE VAVK S + + EI+ L + H
Sbjct: 26 IRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE--SGGNHIADLKKEIEILRNLYHE 83
Query: 462 NIVKFYGFCSHPRHS--FLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALS 518
NIVK+ G C+ + L+ E L GSL E L N I + + +
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL---KYAVQICKGMD 140
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN------------WTE 566
Y+ + VHRD++++NVL+ SE++ ++ DFG+ K ++ W
Sbjct: 141 YLGSRQY---VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWY- 196
Query: 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSN--MNLS 623
APE K DV+SFGV E++ ++L ++
Sbjct: 197 --------APECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMT 248
Query: 624 LNEILDP-----RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ +++ RLP P N D++ ++ C E P +R + Q + +
Sbjct: 249 VTRLVNTLKEGKRLPCP-PNCPDEVYQLM---RKCWEFQPSNRTSFQNLIEGF 297
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 2e-27
Identities = 64/293 (21%), Positives = 120/293 (40%), Gaps = 61/293 (20%)
Query: 404 FDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIK-ALTEIRHR 461
+ +G G V + +PSG+++AVK+ Q+ L ++ ++ +
Sbjct: 9 LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIR--ATVNSQEQKRLLMDLDISMRTVDCP 66
Query: 462 NIVKFYGFCSHPRHSFL----VYECLE--RGSLAEIL----SNDGSIKEFSWIVRTNVIK 511
V FYG + V+ C+E SL + +I E + +
Sbjct: 67 FTVTFYG-------ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPED---ILGKIAV 116
Query: 512 SVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF 571
S+ AL ++H ++HRD+ NVL+++ + ++ DFGI+ +L AG
Sbjct: 117 SIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV-DDVAKDIDAGCK 173
Query: 572 GYVAPE--------LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLS 623
Y+APE Y++ K D++S G+ +E+ + P S +
Sbjct: 174 PYMAPERINPELNQKGYSV----KSDIWSLGITMIELAILRFP------YDSWGTPFQQ- 222
Query: 624 LNEILD---PRLPLP--SRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
L ++++ P+LP S D S CL+++ + RPT +L+
Sbjct: 223 LKQVVEEPSPQLPADKFSAEFVD-FTS------QCLKKNSKERPTYP---ELM 265
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 113 bits (285), Expect = 2e-27
Identities = 63/299 (21%), Positives = 116/299 (38%), Gaps = 44/299 (14%)
Query: 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
+ +G G A+V+RG +G++ A+K F+++ + E + L ++ H
Sbjct: 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR--PVDVQMREFEVLKKLNH 66
Query: 461 RNIVKFYGF--CSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALS 518
+NIVK + + RH L+ E GSL +L + V++ V ++
Sbjct: 67 KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSEYEAR----VSDFGIAKFLKPGSSNWTEFAGTFGYV 574
++ + IVHR+I N++ + + ++DFG A+ L+ + GT Y+
Sbjct: 127 HLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD-EQFVSLYGTEEYL 182
Query: 575 APEL--------AYTMKVTEKCDVYSFGVLALEVIKGK-------HPRDFISLL------ 613
P++ + K D++S GV G PR ++
Sbjct: 183 HPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242
Query: 614 --SSSSSNMNLSLNEILDPRLPLP-----SRNIQDKLISILEVALLCLEESPESRPTMQ 665
S + S + + N +D +P SR +Q L +L LE E
Sbjct: 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLA---NILEADQEKCWGFD 298
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 3e-27
Identities = 68/293 (23%), Positives = 113/293 (38%), Gaps = 49/293 (16%)
Query: 407 EQCIGIGGQASVYRGELP-----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
Q +G G SV +GEVVAVKK S R+F EI+ L ++H
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSLQHD 71
Query: 462 NIVKFYGFCSHPRHS--FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSY 519
NIVK+ G C L+ E L GSL + L + I + + Y
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEY 129
Query: 520 MHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN------------WTEF 567
+ + +HRD++++N+L+ +E ++ DFG+ K L W
Sbjct: 130 LGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-- 184
Query: 568 AGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNM---NLS 623
APE K + DV+SFGV+ E+ + + + N +
Sbjct: 185 -------APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 237
Query: 624 LNEILDP-----RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ +++ RLP P D++ I+ C + RP+ + + +
Sbjct: 238 VFHLIELLKNNGRLPRP-DGCPDEIYMIM---TECWNNNVNQRPSFRDLALRV 286
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 6e-27
Identities = 66/267 (24%), Positives = 104/267 (38%), Gaps = 45/267 (16%)
Query: 356 FVIGIIFGRTKRTSKENK-----GSCENHRGLLSILTFEGKIVYEEIIRATKNFDAEQCI 410
FV + G+ KR N N + LT + + VY + +R + + +
Sbjct: 86 FVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLTVDDQSVYPKALR--DEYIMSKTL 143
Query: 411 GIGGQASVYRG-ELPSGEVVAVK-----KFHSLLLSEISVQREFLNEIKALTEIRHRNIV 464
G G V E + + VA++ KF E EI+ L ++ H I+
Sbjct: 144 GSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCII 203
Query: 465 KFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRT---------NVIKSVAN 515
K F + ++V E +E G L F +V +
Sbjct: 204 KIKNFFDAEDY-YIVLELMEGGEL------------FDKVVGNKRLKEATCKLYFYQMLL 250
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEA---RVSDFGIAKFLKPGSSNWTEFAGTFG 572
A+ Y+H + I+HRD+ +NVLLSS+ E +++DFG +K L S GT
Sbjct: 251 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTPT 306
Query: 573 YVAPE-LAYTMKV--TEKCDVYSFGVL 596
Y+APE L D +S GV+
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVI 333
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 6e-27
Identities = 66/294 (22%), Positives = 116/294 (39%), Gaps = 57/294 (19%)
Query: 403 NFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIK-ALTEIRH 460
+ IG G SV + PSG+++AVK+ + Q++ L ++ +
Sbjct: 23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIR--STVDEKEQKQLLMDLDVVMRSSDC 80
Query: 461 RNIVKFYGFCSHPRHSFL----VYECLE--RGSLAEILSN-----DGSIKEFSWIVRTNV 509
IV+FYG + + C+E S + D I E + + +
Sbjct: 81 PYIVQFYG-------ALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPE-EILGK--I 130
Query: 510 IKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAG 569
+ AL+++ + I+HRDI N+LL ++ DFGI+ L S T AG
Sbjct: 131 TLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV-DSIAKTRDAG 187
Query: 570 TFGYVAPE----LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625
Y+APE A + DV+S G+ E+ G+ P +++ L
Sbjct: 188 CRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPY-------PKWNSVFDQLT 240
Query: 626 EILD---PRLPLP-----SRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+++ P+L S + + ++ LCL + RP + +LL
Sbjct: 241 QVVKGDPPQLSNSEEREFSPSFIN-FVN------LCLTKDESKRPKYK---ELL 284
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 6e-27
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 50/282 (17%)
Query: 407 EQCIGIGGQASVYRGELPSGEV-VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVK 465
+ +G G VY G + VAVK L + EFL E + EI+H N+V+
Sbjct: 18 KHKLGGGQYGEVYEGVWKKYSLTVAVKT----LKEDTMEVEEFLKEAAVMKEIKHPNLVQ 73
Query: 466 FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF 525
G C+ +++ E + G+L + L +E S +V + +++A+ Y+ F
Sbjct: 74 LLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG----SSN------WTEFAGTFGYVA 575
+HRD++++N L+ + +V+DFG+++ + + WT A
Sbjct: 133 ---IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------A 180
Query: 576 PELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDP---- 630
PE K + K DV++FGVL E+ G P + L+++ +
Sbjct: 181 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP------------GIDLSQVYELLEKD 228
Query: 631 -RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
R+ P +K+ ++ C + +P RP+ + Q
Sbjct: 229 YRMERP-EGCPEKVYELM---RACWQWNPSDRPSFAEIHQAF 266
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 6e-27
Identities = 57/294 (19%), Positives = 111/294 (37%), Gaps = 45/294 (15%)
Query: 399 RATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTE 457
R T F + IG G SV++ + G + A+K+ L + Q L E+ A
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNA-LREVYAHAV 66
Query: 458 I-RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKE-FSWIVRTNVIKSVAN 515
+ +H ++V+++ + H + E GSLA+ +S + I F +++ V
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLS-------------------SEYEARVSDFGIAKF 556
L Y+H +VH DI N+ +S ++ ++ D G
Sbjct: 127 GLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTR 183
Query: 557 LKPGSSNWTEFAGTFGYVAPE-LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSS 615
+ S+ G ++A E L K D+++ + + +
Sbjct: 184 I----SSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPL--------- 230
Query: 616 SSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
N + +EI RLP + + + +L+ + + PE RP+ + +
Sbjct: 231 -PRNGDQ-WHEIRQGRLPRIPQVLSQEFTELLK---VMIHPDPERRPSAMALVK 279
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 114 bits (286), Expect = 6e-27
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
++ + + +G G V + + A+K +S S + L E+ L +
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK-LLEEVAVLKLLD 94
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRT---------NVI 510
H NI+K Y F R+ +LV EC + G L F I+ +I
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGEL------------FDEIIHRMKFNEVDAAVII 142
Query: 511 KSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEA---RVSDFGIAKFLKPGSSNWTEF 567
K V + ++Y+H IVHRD+ +N+LL S+ + ++ DFG++ + E
Sbjct: 143 KQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK-MKER 198
Query: 568 AGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
GT Y+APE+ K EKCDV+S GV+ ++ G P
Sbjct: 199 LGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPP 236
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 7e-27
Identities = 70/275 (25%), Positives = 121/275 (44%), Gaps = 38/275 (13%)
Query: 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
E +G G V+ G VA+K +S FL E + + ++RH +V+
Sbjct: 189 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQL 244
Query: 467 YGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF 525
Y S ++V E + +GSL + L G +V ++ +A+ ++Y+ +
Sbjct: 245 YAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVERMNY 301
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT---FGYVAPELAYTM 582
VHRD+ + N+L+ +V+DFG+A+ ++ + +T G + APE A
Sbjct: 302 ---VHRDLRAANILVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYG 356
Query: 583 KVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDP-----RLPLPS 636
+ T K DV+SFG+L E+ KG+ P + E+LD R+P P
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCP- 403
Query: 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ L ++ C + PE RPT + + L
Sbjct: 404 PECPESLHDLM---CQCWRKEPEERPTFEYLQAFL 435
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 8e-27
Identities = 68/293 (23%), Positives = 113/293 (38%), Gaps = 49/293 (16%)
Query: 407 EQCIGIGGQASVYRGELP-----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
Q +G G SV +GEVVAVKK S R+F EI+ L ++H
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILKSLQHD 102
Query: 462 NIVKFYGFCSHPRHS--FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSY 519
NIVK+ G C L+ E L GSL + L + I + + Y
Sbjct: 103 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEY 160
Query: 520 MHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN------------WTEF 567
+ + +HRD++++N+L+ +E ++ DFG+ K L W
Sbjct: 161 LGTKRY---IHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY-- 215
Query: 568 AGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNM---NLS 623
APE K + DV+SFGV+ E+ + + + N +
Sbjct: 216 -------APESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 268
Query: 624 LNEILDP-----RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ +++ RLP P D++ I+ C + RP+ + + +
Sbjct: 269 VFHLIELLKNNGRLPRP-DGCPDEIYMIM---TECWNNNVNQRPSFRDLALRV 317
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 8e-27
Identities = 58/285 (20%), Positives = 107/285 (37%), Gaps = 57/285 (20%)
Query: 410 IGIGGQASVYRGEL--PSGEV---VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIV 464
+G G +VY+G +V VA+K+ + +E L+E + + + ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVC 80
Query: 465 KFYGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSYMHHD 523
+ G C L+ + + G L + + + +I + N +A ++Y+
Sbjct: 81 RLLGICLTSTV-QLITQLMPFGCLLDYVREHKDNIGSQYLL---NWCVQIAKGMNYLEDR 136
Query: 524 CFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS-----------NWTEFAGTFG 572
VHRD++++NVL+ + +++DFG+AK L W
Sbjct: 137 RL---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM------- 186
Query: 573 YVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDP- 630
A E T + DV+S+GV E++ G P D + +EI
Sbjct: 187 --ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD------------GIPASEISSIL 232
Query: 631 ----RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
RLP P I + + C +SRP + +
Sbjct: 233 EKGERLPQP----PICTIDVYMIMRKCWMIDADSRPKFRELIIEF 273
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 9e-27
Identities = 72/299 (24%), Positives = 129/299 (43%), Gaps = 57/299 (19%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRGEL--PSGEV---VAVKKFHSLLLSEISVQREFLN 450
EI ++ IG G VY+G L SG+ VA+K + + + +FL
Sbjct: 40 EIHP--SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEK--QRVDFLG 95
Query: 451 EIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVI 510
E + + H NI++ G S + ++ E +E G+L + L EFS + ++
Sbjct: 96 EAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKD--GEFSVLQLVGML 153
Query: 511 KSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN------- 563
+ +A + Y+ + + VHRD++++N+L++S +VSDFG+++ L+
Sbjct: 154 RGIAAGMKYLANMNY---VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGG 210
Query: 564 -----WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSS 617
WT APE K T DV+SFG++ EV+ G+ P
Sbjct: 211 KIPIRWT---------APEAISYRKFTSASDVWSFGIVMWEVMTYGERPYW--------- 252
Query: 618 SNMNLSLNEILDP-----RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
LS +E++ RLP P + + ++ + C ++ RP + +L
Sbjct: 253 ---ELSNHEVMKAINDGFRLPTP-MDCPSAIYQLM---MQCWQQERARRPKFADIVSIL 304
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 9e-27
Identities = 64/275 (23%), Positives = 126/275 (45%), Gaps = 38/275 (13%)
Query: 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
E+ +G G V+ VAVK FL E + ++H +VK
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKP----GSMSVEAFLAEANVMKTLQHDKLVKL 248
Query: 467 YGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF 525
+ + +++ E + +GSL + L S++GS + ++ + +A ++++ +
Sbjct: 249 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI--DFSAQIAEGMAFIEQRNY 305
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYV---APELAYTM 582
+HRD+ + N+L+S+ +++DFG+A+ ++ + +T G + APE
Sbjct: 306 ---IHRDLRAANILVSASLVCKIADFGLARVIE--DNEYTAREGAKFPIKWTAPEAINFG 360
Query: 583 KVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDP-----RLPLPS 636
T K DV+SFG+L +E++ G+ P +S E++ R+P P
Sbjct: 361 SFTIKSDVWSFGILLMEIVTYGRIPYP------------GMSNPEVIRALERGYRMPRP- 407
Query: 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
N ++L +I+ + C + PE RPT + + +L
Sbjct: 408 ENCPEELYNIM---MRCWKNRPEERPTFEYIQSVL 439
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 1e-26
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 32/209 (15%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
+ N+D ++ +G G + V R +G A K ++ LS Q+ E + +++
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-LEREARICRKLQ 86
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVR---------TNVI 510
H NIV+ + +LV++ + G L F IV ++ I
Sbjct: 87 HPNIVRLHDSIQEESFHYLVFDLVTGGEL------------FEDIVAREFYSEADASHCI 134
Query: 511 KSVANALSYMH-HDCFPPIVHRDISSKNVLLSSEYEA---RVSDFGIAKFLKPGSSNWTE 566
+ + +++Y H + IVHR++ +N+LL+S+ + +++DFG+A + + W
Sbjct: 135 QQILESIAYCHSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHG 189
Query: 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGV 595
FAGT GY++PE+ ++ D+++ GV
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGV 218
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 1e-26
Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 39/232 (16%)
Query: 377 ENHRGLLSILTFEGKIVYEEIIRATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFH 435
+H L F+G + ++ +G G V + + + + AVK +
Sbjct: 5 HHHSSGRENLYFQGTF--------AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVIN 56
Query: 436 SLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSND 495
L E++ L ++ H NI+K + ++V E G L
Sbjct: 57 KASAKNKDTST-ILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL------- 108
Query: 496 GSIKEFSWIVRT---------NVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEA 546
F I++ +IK V + ++YMH IVHRD+ +N+LL S+ +
Sbjct: 109 -----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKD 160
Query: 547 ---RVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGV 595
++ DFG++ + + + GT Y+APE+ EKCDV+S GV
Sbjct: 161 CDIKIIDFGLSTCFQQNTK-MKDRIGTAYYIAPEV-LRGTYDEKCDVWSAGV 210
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 109 bits (273), Expect = 1e-26
Identities = 33/264 (12%), Positives = 65/264 (24%), Gaps = 45/264 (17%)
Query: 407 EQCIGIGGQASVYRGE---LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNI 463
G ++ L VA+ + V +E L+ L+ I +
Sbjct: 36 LIFHGGVPPLQFWQALDTAL--DRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGV 93
Query: 464 VKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHD 523
+ +V E + GSL E+ S ++ S+A A H
Sbjct: 94 ARVLDVVHTRAGGLVVAEWIRGGSLQEVADTSPSPVGAIRAMQ-----SLAAAADAAHRA 148
Query: 524 CFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMK 583
+ V +S + G +
Sbjct: 149 ---GVALSIDHPSRVRVSID--------GDVV------------LAYPATMPD------- 178
Query: 584 VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKL 643
+ D+ G ++ + P + S + + P+ +D
Sbjct: 179 ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA-----PAERDTAGQPIEPADIDRDIP 233
Query: 644 ISILEVALLCLEESPESRPTMQTV 667
I VA ++ R +
Sbjct: 234 FQISAVAARSVQGDGGIRSASTLL 257
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 1e-26
Identities = 70/275 (25%), Positives = 121/275 (44%), Gaps = 38/275 (13%)
Query: 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
E +G G V+ G VA+K +S FL E + + ++RH +V+
Sbjct: 272 EVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQL 327
Query: 467 YGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF 525
Y S ++V E + +GSL + L G +V ++ +A+ ++Y+ +
Sbjct: 328 YAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVERMNY 384
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT---FGYVAPELAYTM 582
VHRD+ + N+L+ +V+DFG+A+ ++ + +T G + APE A
Sbjct: 385 ---VHRDLRAANILVGENLVCKVADFGLARLIE--DNEYTARQGAKFPIKWTAPEAALYG 439
Query: 583 KVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDP-----RLPLPS 636
+ T K DV+SFG+L E+ KG+ P + E+LD R+P P
Sbjct: 440 RFTIKSDVWSFGILLTELTTKGRVP------------YPGMVNREVLDQVERGYRMPCP- 486
Query: 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ L ++ C + PE RPT + + L
Sbjct: 487 PECPESLHDLM---CQCWRKEPEERPTFEYLQAFL 518
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 1e-26
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 30/219 (13%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
+ + ++ +G G V + +G+ AVK + + + + L E++ L ++
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRT---------NVI 510
H NI+K Y F + +LV E G L F I+ +I
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGEL------------FDEIISRKRFSEVDAARII 132
Query: 511 KSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEA---RVSDFGIAKFLKPGSSNWTEF 567
+ V + ++YMH + IVHRD+ +N+LL S+ + R+ DFG++ + +
Sbjct: 133 RQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDK 188
Query: 568 AGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
GT Y+APE+ EKCDV+S GV+ ++ G P
Sbjct: 189 IGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPP 226
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 1e-26
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 32/209 (15%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
+ N+D ++ +G G + V R +G A K ++ LS Q+ E + +++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-LEREARICRKLQ 63
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVR---------TNVI 510
H NIV+ + +LV++ + G L F IV ++ I
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGEL------------FEDIVAREFYSEADASHCI 111
Query: 511 KSVANALSYMH-HDCFPPIVHRDISSKNVLLSSEYEA---RVSDFGIAKFLKPGSSNWTE 566
+ + +++Y H + IVHR++ +N+LL+S+ + +++DFG+A + + W
Sbjct: 112 QQILESIAYCHSNG----IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHG 166
Query: 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGV 595
FAGT GY++PE+ ++ D+++ GV
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGV 195
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 2e-26
Identities = 73/269 (27%), Positives = 120/269 (44%), Gaps = 27/269 (10%)
Query: 403 NFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
+FD + +G G +VY E + ++A+K L + V+ + EI+ + +RH
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH 521
NI++ Y + + +L+ E RG L + L G E T ++ +A+AL Y H
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE--QRSAT-FMEELADALHYCH 131
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT 581
++HRDI +N+L+ + E +++DFG + P T GT Y+ PE+
Sbjct: 132 ERK---VIHRDIKPENLLMGYKGELKIADFGWSV-HAPSLRRRT-MCGTLDYLPPEMIEG 186
Query: 582 MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP---SRN 638
EK D++ GVL E + G P D S + + I++ L P S
Sbjct: 187 KTHDEKVDLWCAGVLCYEFLVGMPPFD--------SPSHTETHRRIVNVDLKFPPFLSDG 238
Query: 639 IQDKLISILEVALLCLEESPESRPTMQTV 667
+D LIS L L P R ++ V
Sbjct: 239 SKD-LISKL------LRYHPPQRLPLKGV 260
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 110 bits (278), Expect = 2e-26
Identities = 69/301 (22%), Positives = 127/301 (42%), Gaps = 58/301 (19%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRGELPSGE----VVAVKKFHSLLLSEISVQREFLNE 451
E+ N ++ +G G V G L VA+K + +R+FL E
Sbjct: 41 ELDA--TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK--QRRDFLGE 96
Query: 452 IKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVI 510
+ + H NI++ G + + +V E +E GSL L +D +F+ I ++
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGML 153
Query: 511 KSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN------- 563
+ +A+ + Y+ + VHRD++++N+L++S +VSDFG+ + L+
Sbjct: 154 RGIASGMKYLSDMGY---VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGG 210
Query: 564 -----WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSS 617
WT +PE K T DV+S+G++ EV+ G+ P
Sbjct: 211 KIPIRWT---------SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW--------- 252
Query: 618 SNMNLSLNEILDP-----RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672
+S +++ RLP P + L ++ L C ++ +RP + + +L
Sbjct: 253 ---EMSNQDVIKAVDEGYRLPPP-MDCPAALYQLM---LDCWQKDRNNRPKFEQIVSILD 305
Query: 673 K 673
K
Sbjct: 306 K 306
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 2e-26
Identities = 59/282 (20%), Positives = 106/282 (37%), Gaps = 49/282 (17%)
Query: 417 SVYRGEL-----PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS 471
V +GE+VAVK + + + + EI L + H +I+K+ G C
Sbjct: 46 KVSLYCYDPTNDGTGEMVAVKALKADAGPQ--HRSGWKQEIDILRTLYHEHIIKYKGCCE 103
Query: 472 HPRHS--FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIV 529
+ LV E + GSL + L + + ++Y+H + +
Sbjct: 104 DAGAASLQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHAQHY---I 156
Query: 530 HRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN------------WTEFAGTFGYVAPE 577
HRD++++NVLL ++ ++ DFG+AK + G W APE
Sbjct: 157 HRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY---------APE 207
Query: 578 LAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSN--MNLSLNEILDP---- 630
K DV+SFGV E++ + + +++ + +
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267
Query: 631 -RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
RLP P ++ ++ C E RPT + + +L
Sbjct: 268 ERLPRP-DKCPAEVYHLM---KNCWETEASFRPTFENLIPIL 305
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 2e-26
Identities = 56/234 (23%), Positives = 96/234 (41%), Gaps = 45/234 (19%)
Query: 378 NHRGLLSILTFEGKIVYEEIIRATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHS 436
+H L F+G + ++ +G G V + + + + AVK +
Sbjct: 6 HHSSGRENLYFQGTF--------AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINK 57
Query: 437 LLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDG 496
L E++ L ++ H NI+K + ++V E G L
Sbjct: 58 ASAKNKDTST-ILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL-------- 108
Query: 497 SIKEFSWIVR---------TNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEA- 546
F I++ +IK V + ++YMH IVHRD+ +N+LL S+ +
Sbjct: 109 ----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDC 161
Query: 547 --RVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL---AYTMKVTEKCDVYSFGV 595
++ DFG++ + + + GT Y+APE+ Y EKCDV+S GV
Sbjct: 162 DIKIIDFGLSTCFQQNTK-MKDRIGTAYYIAPEVLRGTY----DEKCDVWSAGV 210
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 3e-26
Identities = 48/233 (20%), Positives = 98/233 (42%), Gaps = 18/233 (7%)
Query: 60 LRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNF 119
LA+ ++ ++++T ++ +T L L L
Sbjct: 15 DPALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGV--TTIEGVQYLNNLIGLEL 70
Query: 120 SMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRV 179
N IT + P + L ++ +L+ S N + + + L+S+ L L +++ P
Sbjct: 71 KDNQIT-DLAP-LKNLTKITELELSGNPL--KNVSAIAGLQSIKTLDLTSTQITDVTP-- 124
Query: 180 LGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDL 239
L LS L+ L L N+++ +I L L + YL++ N Q P L L +L+ L
Sbjct: 125 LAGLSNLQVLYLDLNQIT-NISP-LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKA 180
Query: 240 SHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
N + +I P + +L +L ++++ +N +S + P L + ++ +
Sbjct: 181 DDNKIS-DISP-LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTI 229
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 4e-25
Identities = 60/255 (23%), Positives = 105/255 (41%), Gaps = 26/255 (10%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQ 73
N + ++++ +V +L +T L + I ++ L +L + L+
Sbjct: 17 ALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGV-TTIE-GVQYLNNLIGLELKD 72
Query: 74 NHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIG 133
N +T +++ +T L++S N + S+ Q + TL+ + IT + P +
Sbjct: 73 NQIT-DLAP-LKNLTKITELELSGNPL--KNVSAIAGLQSIKTLDLTSTQIT-DVTP-LA 126
Query: 134 KLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLST 193
L L L LNQI I L L +L YL + ++S +L L +LS+L L
Sbjct: 127 GLSNLQVLYLDLNQIT-NIS-PLAGLTNLQYLSIGNAQVS-DLT-PLANLSKLTTLKADD 182
Query: 194 NKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQIC 253
NK+S I L +L + ++L NNQ P L L + L++ I
Sbjct: 183 NKIS-DISP-LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQ--------TIT 230
Query: 254 NLESLEKLNVSHNNL 268
N N+ N+
Sbjct: 231 NQPVFYNNNLVVPNV 245
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 8e-25
Identities = 61/264 (23%), Positives = 104/264 (39%), Gaps = 20/264 (7%)
Query: 9 PPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNR 68
+ + + L + ++ ++ G + L L LE+ +NQ+ + L+NL +
Sbjct: 34 TVTQADLDGITTLSAFGTGVT-TIEG-VQYLNNLIGLELKDNQI-TDLA-PLKNLTKITE 89
Query: 69 VHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSI 128
+ L N L N+S + G ++ LD++ + L L +N IT +I
Sbjct: 90 LELSGNPLK-NVSAIAG-LQSIKTLDLTSTQITD--VTPLAGLSNLQVLYLDLNQIT-NI 144
Query: 129 PPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEY 188
P + L L L Q+ P L NL L L + NK+S P L SL L
Sbjct: 145 SP-LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIE 199
Query: 189 LDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEI 248
+ L N++S P L N + + L+N + LV ++ G I
Sbjct: 200 VHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPVFYNNNLVV---PNVVKGPSGAPI 254
Query: 249 PPQ-ICNLESLEKLNVSHNNLSGL 271
P I + + N++ N S +
Sbjct: 255 APATISDNGTYASPNLTWNLTSFI 278
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 89.4 bits (222), Expect = 1e-19
Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 15/203 (7%)
Query: 95 ISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPI 154
I+ I + +N+T ++ L + L + I
Sbjct: 3 ITQPTAINVI-FPDPALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIE- 57
Query: 155 ELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLN 214
+ L +L L L N+++ +L L +L+++ L+LS N L + L + L+
Sbjct: 58 GVQYLNNLIGLELKDNQIT-DLA-PLKNLTKITELELSGNPLK--NVSAIAGLQSIKTLD 113
Query: 215 LSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPS 274
L++ Q P L L L L L N + I P + L +L+ L++ + +S L P
Sbjct: 114 LTSTQITDVTP--LAGLSNLQVLYLDLNQIT-NISP-LAGLTNLQYLSIGNAQVSDLTP- 168
Query: 275 CFEGMHGLSCIDISYNELLGLIP 297
+ L+ + N++ + P
Sbjct: 169 -LANLSKLTTLKADDNKISDISP 190
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 Length = 308 | Back alignment and structure |
|---|
Score = 70.5 bits (173), Expect = 2e-13
Identities = 32/198 (16%), Positives = 71/198 (35%), Gaps = 17/198 (8%)
Query: 10 PSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRV 69
++ ++K L L S ++ P + L L L +D NQ+ I L L +L +
Sbjct: 101 SAIAGLQSIKTLDLTSTQITDVTP--LAGLSNLQVLYLDLNQI-TNIS-PLAGLTNLQYL 156
Query: 70 HLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIP 129
+ ++ +++ + + LT L N +I S L ++ N I+ +
Sbjct: 157 SIGNAQVS-DLTPLANL-SKLTTLKADDNKI-SDI-SPLASLPNLIEVHLKNNQIS-DVS 211
Query: 130 PEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYL 189
P + L + + I + NL N + + + +
Sbjct: 212 P-LANTSNLFIVTLTNQTITNQPVFYNNNLVVPNVVKGPSGAP-------IAPATISDNG 263
Query: 190 DLSTNKLSGSIPETLGNL 207
++ L+ ++ + N+
Sbjct: 264 TYASPNLTWNLTSFINNV 281
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 3e-26
Identities = 58/307 (18%), Positives = 112/307 (36%), Gaps = 65/307 (21%)
Query: 393 VYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEV--------VAVKKFHSLLLSEISV 444
V+ +I ++ + +G G +++G V +K L + +
Sbjct: 1 VFHKIRN--EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLK---VLDKAHRNY 55
Query: 445 QREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWI 504
F ++++ H+++V YG C + LV E ++ GSL L + + W
Sbjct: 56 SESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWK 115
Query: 505 VRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEAR--------VSDFGIAKF 556
+ V K +A A+ ++ + +H ++ +KN+LL E + + +SD GI+
Sbjct: 116 L--EVAKQLAAAMHFLEENTL---IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISIT 170
Query: 557 LKPGSS-----NWTEFAGTFGYVAPE-LAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDF 609
+ P W PE + + D +SFG E+ G P
Sbjct: 171 VLPKDILQERIPWV---------PPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS- 220
Query: 610 ISLLSSSSSNMNLSLNEILDP-----RLPLPSRNIQDKLISILEVALLCLEESPESRPTM 664
L L +LP P K + + C++ P+ RP+
Sbjct: 221 -----------ALDSQRKLQFYEDRHQLPAP------KAAELANLINNCMDYEPDHRPSF 263
Query: 665 QTVCQLL 671
+ + + L
Sbjct: 264 RAIIRDL 270
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 3e-26
Identities = 64/282 (22%), Positives = 121/282 (42%), Gaps = 52/282 (18%)
Query: 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
+ +G G V+ G VAVK L FL E + +++H+ +V+
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKS----LKQGSMSPDAFLAEANLMKQLQHQRLVRL 73
Query: 467 YGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF 525
Y + +++ E +E GSL + L + G + + ++ +A ++++ +
Sbjct: 74 YAVVTQ-EPIYIITEYMENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEERNY 130
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFL-------KPGSS---NWTEFAGTFGYVA 575
+HRD+ + N+L+S +++DFG+A+ + + G+ WT A
Sbjct: 131 ---IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT---------A 178
Query: 576 PELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDP---- 630
PE T K DV+SFG+L E++ G+ P ++ E++
Sbjct: 179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP------------GMTNPEVIQNLERG 226
Query: 631 -RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
R+ P N ++L ++ LC +E PE RPT + +L
Sbjct: 227 YRMVRP-DNCPEELYQLM---RLCWKERPEDRPTFDYLRSVL 264
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 3e-26
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 12/195 (6%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVK--KFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
IG G + V R +G+ AVK S + E ++H +IV+
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 467 YGFCSHPRHSFLVYECLERGSLAE-ILSNDGSIKEFSWIVRTNVIKSVANALSYMH-HDC 524
S ++V+E ++ L I+ + +S V ++ ++ + AL Y H ++
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN- 150
Query: 525 FPPIVHRDISSKNVLLSSEYEA---RVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT 581
I+HRD+ VLL+S+ + ++ FG+A L GT ++APE+
Sbjct: 151 ---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKR 207
Query: 582 MKVTEKCDVYSFGVL 596
+ DV+ GV+
Sbjct: 208 EPYGKPVDVWGCGVI 222
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 6e-26
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 18/203 (8%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQRE-FLNEIKALTEI 458
F ++ +G G V+ E SG +K ++ V E EI+ L +
Sbjct: 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIK---TINKDRSQVPMEQIEAEIEVLKSL 77
Query: 459 RHRNIVKFYGFCSHPRHSFLVYECLERGSLAE-ILSNDGSIKEFSWIVRTNVIKSVANAL 517
H NI+K + + ++V E E G L E I+S K S ++K + NAL
Sbjct: 78 DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNAL 137
Query: 518 SYMH-HDCFPPIVHRDISSKNVLLSSEYEA---RVSDFGIAKFLKPGSSNWTEFAGTFGY 573
+Y H +VH+D+ +N+L ++ DFG+A+ K T AGT Y
Sbjct: 138 AYFHSQH----VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH-STNAAGTALY 192
Query: 574 VAPE-LAYTMKVTEKCDVYSFGV 595
+APE VT KCD++S GV
Sbjct: 193 MAPEVFKR--DVTFKCDIWSAGV 213
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 8e-26
Identities = 55/207 (26%), Positives = 82/207 (39%), Gaps = 38/207 (18%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVK-----KFHSLLLSEISVQREFLNEIKALTEIRHRNI 463
+G G V E + + VA+K KF E EI+ L ++ H I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 464 VKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRT---------NVIKSVA 514
+K F + ++V E +E G L F +V +
Sbjct: 78 IKIKNFFDAEDY-YIVLELMEGGEL------------FDKVVGNKRLKEATCKLYFYQML 124
Query: 515 NALSYMHHDCFPPIVHRDISSKNVLLSSEYEA---RVSDFGIAKFLKPGSSNWTEFAGTF 571
A+ Y+H + I+HRD+ +NVLLSS+ E +++DFG +K L S GT
Sbjct: 125 LAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTP 180
Query: 572 GYVAPE-LAYTMKV--TEKCDVYSFGV 595
Y+APE L D +S GV
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGV 207
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 9e-26
Identities = 37/233 (15%), Positives = 72/233 (30%), Gaps = 27/233 (11%)
Query: 395 EEIIRATKNFDAEQCIGIGGQASVYRGE------LPSGEVVAVKKFHSLLLSEISVQREF 448
E +K +G G A VY + + +K E + +
Sbjct: 58 TEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQL 117
Query: 449 LNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSI--KEFSWIVR 506
+ +K +KFY S LV E G+L ++ + K +
Sbjct: 118 MERLK---PSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLV 174
Query: 507 TNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEA-----------RVSDFGIAK 555
+ + + +H I+H DI N +L + + + D G +
Sbjct: 175 ISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSI 231
Query: 556 FLK--PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
+K P + +T T G+ E+ + D + ++ G +
Sbjct: 232 DMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYM 284
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 1e-25
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 39/209 (18%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVK-----KFHSLLLSEISVQRE-FLNEIKALTEI-RHR 461
+G G + V R P+ + AVK S E+ RE L E+ L ++ H
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVR---------TNVIKS 512
NI++ FLV++ +++G L F ++ ++++
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGEL------------FDYLTEKVTLSEKETRKIMRA 132
Query: 513 VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFG 572
+ + +H IVHRD+ +N+LL + +++DFG + L PG E GT
Sbjct: 133 LLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK-LREVCGTPS 188
Query: 573 YVAPE-LAYTMKV-----TEKCDVYSFGV 595
Y+APE + +M ++ D++S GV
Sbjct: 189 YLAPEIIECSMNDNHPGYGKEVDMWSTGV 217
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 2e-25
Identities = 50/225 (22%), Positives = 85/225 (37%), Gaps = 8/225 (3%)
Query: 21 LYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI 80
L +VP I + + N++ S R +L + L N L
Sbjct: 16 TSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARID 72
Query: 81 SEVFGIYPNLTFLDISHNNFYGEI-WSSWGKCQQLGTLNFSMNNITGSIPPEI-GKLYQL 138
+ F L LD+S N + +++ +L TL+ + + P + L L
Sbjct: 73 AAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAAL 131
Query: 139 HKLDFSLNQIVGEIPIE-LGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLS 197
L N + +P + +L +L +L L+GN++S R L L+ L L N+++
Sbjct: 132 QYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190
Query: 198 GSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHN 242
P +L ++ L L N L L L L L+ N
Sbjct: 191 HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 2e-21
Identities = 52/226 (23%), Positives = 87/226 (38%), Gaps = 33/226 (14%)
Query: 1 MNHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIP-R 58
N +S +P + NL L+L+SN L+ L L L++ +N +
Sbjct: 41 GNRIS-HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPA 99
Query: 59 SLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLN 118
+ L L+ +HL++ L ++ F G L L
Sbjct: 100 TFHGLGRLHTLHLDRCGLQ----------------ELGPGLFRG--------LAALQYLY 135
Query: 119 FSMNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYLVLNGNKLSGNL 176
N + ++P + L L L N+I +P L SL+ L+L+ N+++
Sbjct: 136 LQDNALQ-ALPDDTFRDLGNLTHLFLHGNRIS-SVPERAFRGLHSLDRLLLHQNRVAHVH 193
Query: 177 PRVLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQFR 221
P L L L L N LS ++P L L + YL L++N +
Sbjct: 194 PHAFRDLGRLMTLYLFANNLS-ALPTEALAPLRALQYLRLNDNPWV 238
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 2e-17
Identities = 31/151 (20%), Positives = 59/151 (39%), Gaps = 5/151 (3%)
Query: 151 EIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKV 210
+P+ + + + L+GN++S + L L L +N L+ L +
Sbjct: 25 AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82
Query: 211 HYLNLSNNQFRKEFPVE-LEKLVQLSELDLSHNFLGGEIPPQI-CNLESLEKLNVSHNNL 268
L+LS+N + L +L L L L E+ P + L +L+ L + N L
Sbjct: 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQDNAL 141
Query: 269 SGLIPSCFEGMHGLSCIDISYNELLGLIPNS 299
L F + L+ + + N + + +
Sbjct: 142 QALPDDTFRDLGNLTHLFLHGNRISSVPERA 172
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* Length = 285 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-04
Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 232 VQLSELDLSHNFLGGEIPPQI-CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYN 290
+ L N + +P +L L + N L+ + + F G+ L +D+S N
Sbjct: 32 AASQRIFLHGNRIS-HVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90
Query: 291 ELLGLIPNST 300
L + +T
Sbjct: 91 AQLRSVDPAT 100
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 2e-25
Identities = 54/246 (21%), Positives = 97/246 (39%), Gaps = 34/246 (13%)
Query: 363 GRTKRTSKENKGSCENHRGLLSILTFEGKIVYEEIIRATKNFDAEQCIGIGGQASVYRG- 421
G + + + L + I + F+ E +G G + VYR
Sbjct: 14 GTENLYFQSMSSVTASAAPGTASLVPDYWIDGSNRDALSDFFEVESELGRGATSIVYRCK 73
Query: 422 ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481
+ + + A+K +L + ++ EI L + H NI+K P LV E
Sbjct: 74 QKGTQKPYALK-----VLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128
Query: 482 CLERGSLAEILSNDGSIKEFSWIVR---------TNVIKSVANALSYMHHDCFPPIVHRD 532
+ G L F IV + +K + A++Y+H + IVHRD
Sbjct: 129 LVTGGEL------------FDRIVEKGYYSERDAADAVKQILEAVAYLHENG---IVHRD 173
Query: 533 ISSKNVLLSSEYEA---RVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCD 589
+ +N+L ++ +++DFG++K ++ GT GY APE+ + D
Sbjct: 174 LKPENLLYATPAPDAPLKIADFGLSKIVEHQVL-MKTVCGTPGYCAPEILRGCAYGPEVD 232
Query: 590 VYSFGV 595
++S G+
Sbjct: 233 MWSVGI 238
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 2e-25
Identities = 46/201 (22%), Positives = 86/201 (42%), Gaps = 14/201 (6%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
++D + +G G V+R E +G A K ++ S + EI+ ++ +R
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAK---FVMTPHESDKETVRKEIQTMSVLR 212
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAE-ILSNDGSIKEFSWIVRTNVIKSVANALS 518
H +V + ++YE + G L E + + E + ++ V L
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAV---EYMRQVCKGLC 269
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSEYEARV--SDFGIAKFLKPGSSNWTEFAGTFGYVAP 576
+MH + VH D+ +N++ +++ + DFG+ L P + GT + AP
Sbjct: 270 HMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-QSVKVTTGTAEFAAP 325
Query: 577 ELAYTMKVTEKCDVYSFGVLA 597
E+A V D++S GVL+
Sbjct: 326 EVAEGKPVGYYTDMWSVGVLS 346
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 2e-25
Identities = 49/212 (23%), Positives = 84/212 (39%), Gaps = 39/212 (18%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKAL-TEI 458
T ++ ++ IG+G + R + AVK + S+ E I+ L
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVK---IIDKSKRDPTEE----IEILLRYG 73
Query: 459 RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVR---------TNV 509
+H NI+ ++ ++V E ++ G L I+R + V
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGEL------------LDKILRQKFFSEREASAV 121
Query: 510 IKSVANALSYMH-HDCFPPIVHRDISSKNVLLSSEYEA----RVSDFGIAKFLKPGSSNW 564
+ ++ + Y+H +VHRD+ N+L E R+ DFG AK L+ +
Sbjct: 122 LFTITKTVEYLHAQG----VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL 177
Query: 565 TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVL 596
T +VAPE+ CD++S GVL
Sbjct: 178 MTPCYTANFVAPEVLERQGYDAACDIWSLGVL 209
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 110 bits (275), Expect = 2e-25
Identities = 56/259 (21%), Positives = 105/259 (40%), Gaps = 24/259 (9%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQ 73
F L S++ +V L + + +N+ + +S++ + L ++ +
Sbjct: 19 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDI-----KSVQGIQYL--PNVTK 69
Query: 74 NHLTGN-ISEVFGI--YPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPP 130
L GN ++++ + NL +L + N + SS ++L +L+ N I+ I
Sbjct: 70 LFLNGNKLTDIKPLTNLKNLGWLFLDENKI--KDLSSLKDLKKLKSLSLEHNGIS-DING 126
Query: 131 EIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLD 190
+ L QL L N+I L L L+ L L N++S ++ L L++L+ L
Sbjct: 127 -LVHLPQLESLYLGNNKI--TDITVLSRLTKLDTLSLEDNQIS-DIV-PLAGLTKLQNLY 181
Query: 191 LSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPP 250
LS N +S + L L + L L + + + LV + + + L P
Sbjct: 182 LSKNHIS-DLRA-LAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSL--VTPE 237
Query: 251 QICNLESLEKLNVSHNNLS 269
I + EK NV +
Sbjct: 238 IISDDGDYEKPNVKWHLPE 256
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 3e-23
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 19/231 (8%)
Query: 71 LEQNHLTGN-ISEVFGI--YPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGS 127
+ + I ++F + ++ + + + + + + ++I S
Sbjct: 1 MGETITVSTPIKQIFPDDAFAETIKDNLKKKSVTDA--VTQNELNSIDQIIANNSDIK-S 57
Query: 128 IPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELE 187
+ I L + KL + N++ +I L NLK+L +L L+ NK+ +L L L +L+
Sbjct: 58 VQG-IQYLPNVTKLFLNGNKLT-DIK-PLTNLKNLGWLFLDENKIK-DLS-SLKDLKKLK 112
Query: 188 YLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGE 247
L L N +S I L +L ++ L L NN+ L +L +L L L N + +
Sbjct: 113 SLSLEHNGIS-DI-NGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQIS-D 167
Query: 248 IPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPN 298
I P + L L+ L +S N++S L G+ L +++ E L N
Sbjct: 168 IVP-LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPIN 215
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 75.1 bits (184), Expect = 3e-14
Identities = 38/213 (17%), Positives = 77/213 (36%), Gaps = 12/213 (5%)
Query: 12 VGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHL 71
+ N NL L+L N + + + +L +L +L +++N + I L +L L ++L
Sbjct: 83 LTNLKNLGWLFLDENKIK-DLSS-LKDLKKLKSLSLEHNGI-SDIN-GLVHLPQLESLYL 138
Query: 72 EQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPE 131
N +T +I+ V L L + N +I +L L S N+I+ +
Sbjct: 139 GNNKIT-DIT-VLSRLTKLDTLSLEDNQIS-DI-VPLAGLTKLQNLYLSKNHIS-DLRA- 192
Query: 132 IGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDL 191
+ L L L+ + + + NL N + L P ++ + E ++
Sbjct: 193 LAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSL--VTPEIISDDGDYEKPNV 250
Query: 192 STNKLSGSIPETLGNLLKVHYLNLSNNQFRKEF 224
+ + + V +
Sbjct: 251 KWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVT 283
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 68.2 bits (166), Expect = 4e-12
Identities = 37/199 (18%), Positives = 67/199 (33%), Gaps = 15/199 (7%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQ 73
+ LK L L N +S + G + +L QL +L + NN++ L L L+ + LE
Sbjct: 107 DLKKLKSLSLEHNGIS-DING-LVHLPQLESLYLGNNKI--TDITVLSRLTKLDTLSLED 162
Query: 74 NHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIG 133
N ++ +I L L +S N+ + + L L
Sbjct: 163 NQIS-DIVP-LAGLTKLQNLYLSKNHI--SDLRALAGLKNLDVLELFSQECLNKPINHQS 218
Query: 134 KLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLST 193
L + + + +V I + + +LP +S + Y ++
Sbjct: 219 NLVVPNTVKNTDGSLVTPEIIS-------DDGDYEKPNVKWHLPEFTNEVSFIFYQPVTI 271
Query: 194 NKLSGSIPETLGNLLKVHY 212
K + LK Y
Sbjct: 272 GKAKARFHGRVTQPLKEVY 290
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A Length = 605 | Back alignment and structure |
|---|
Score = 56.7 bits (136), Expect = 2e-08
Identities = 24/143 (16%), Positives = 59/143 (41%), Gaps = 6/143 (4%)
Query: 10 PSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRV 69
+ + L+ LYL +N ++ + + L +L L +++NQ+ L L L +
Sbjct: 125 NGLVHLPQLESLYLGNNKIT-DITV-LSRLTKLDTLSLEDNQI--SDIVPLAGLTKLQNL 180
Query: 70 HLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIP 129
+L +NH++ ++ + G+ NL L++ + + T+ + ++
Sbjct: 181 YLSKNHIS-DLRALAGL-KNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEI 238
Query: 130 PEIGKLYQLHKLDFSLNQIVGEI 152
Y+ + + L + E+
Sbjct: 239 ISDDGDYEKPNVKWHLPEFTNEV 261
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 3e-25
Identities = 41/251 (16%), Positives = 97/251 (38%), Gaps = 28/251 (11%)
Query: 431 VKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAE 490
+ LS S +I+ + +N V S + ++ + + +L +
Sbjct: 91 KDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKD 150
Query: 491 ILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSD 550
++ S+++ V ++ +A A+ ++H ++HRD+ N+ + + +V D
Sbjct: 151 WMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGD 207
Query: 551 FGIAKFLK------------PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLAL 598
FG+ + P + T GT Y++PE + + K D++S G++
Sbjct: 208 FGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILF 267
Query: 599 EVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESP 658
E++ + S+ + ++ + + PL + +++ L SP
Sbjct: 268 ELL---YSF-------STQMERVRIITDVRNLKFPLLFTQKYPQEHMMVQ---DMLSPSP 314
Query: 659 ESRPTMQTVCQ 669
RP + +
Sbjct: 315 TERPEATDIIE 325
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 3e-25
Identities = 51/241 (21%), Positives = 92/241 (38%), Gaps = 20/241 (8%)
Query: 365 TKRTSKENKGSCENHRGLLSIL--TFEGKIVYEEIIRATKNFDAEQCIGIGGQASVYRG- 421
+K K + ++ + + + V + +D + +G G V+R
Sbjct: 12 SKVRGKYDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCV 71
Query: 422 ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481
E +G V K ++ + NEI + ++ H ++ + L+ E
Sbjct: 72 EKATGRVFVAKFINTPYPLDK---YTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 128
Query: 482 CLERGSLAE-ILSNDGSIKEFSWIVRTNVIKSVANALSYMH-HDCFPPIVHRDISSKNVL 539
L G L + I + D + E N ++ L +MH H IVH DI +N++
Sbjct: 129 FLSGGELFDRIAAEDYKMSE---AEVINYMRQACEGLKHMHEHS----IVHLDIKPENIM 181
Query: 540 LSSEYEARV--SDFGIAKFLKPGSSNWTEFAGTFGYVAPE-LAYTMKVTEKCDVYSFGVL 596
++ + V DFG+A L P T + APE + V D+++ GVL
Sbjct: 182 CETKKASSVKIIDFGLATKLNPDEIVKVTT-ATAEFAAPEIVDREP-VGFYTDMWAIGVL 239
Query: 597 A 597
Sbjct: 240 G 240
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 4e-25
Identities = 55/211 (26%), Positives = 85/211 (40%), Gaps = 40/211 (18%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVK----------KFHSLLLSEISVQREFLNEIKALTEI 458
+G G V E A+K ++ + E NEI L +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 459 RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRT---------NV 509
H NI+K + ++ +LV E E G L F I+ N+
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGEL------------FEQIINRHKFDECDAANI 151
Query: 510 IKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEA---RVSDFGIAKFLKPGSSNWTE 566
+K + + + Y+H IVHRDI +N+LL ++ ++ DFG++ F +
Sbjct: 152 MKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRD 207
Query: 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGVLA 597
GT Y+APE K EKCDV+S GV+
Sbjct: 208 RLGTAYYIAPE-VLKKKYNEKCDVWSCGVIM 237
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 4e-25
Identities = 64/291 (21%), Positives = 118/291 (40%), Gaps = 45/291 (15%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRGEL--PSGEV--VAVKKFHSLLLSEISVQREFLNE 451
I R ++ + +G G VY G GE VAVK + + +F++E
Sbjct: 8 GIAR--EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLD--NKEKFMSE 63
Query: 452 IKALTEIRHRNIVKFYGFCS-HPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNV 509
+ + H +IVK G P +++ E G L L N S+K + +
Sbjct: 64 AVIMKNLDHPHIVKLIGIIEEEPT--WIIMELYPYGELGHYLERNKNSLKVLTLV---LY 118
Query: 510 IKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAG 569
+ A++Y+ VHRDI+ +N+L++S ++ DFG++++++ ++ + +
Sbjct: 119 SLQICKAMAYLESINC---VHRDIAVRNILVASPECVKLGDFGLSRYIE--DEDYYKASV 173
Query: 570 T---FGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLN 625
T +++PE + T DV+ F V E++ GK P L
Sbjct: 174 TRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF------------WLENK 221
Query: 626 EILDP-----RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+++ RLP P L +++ C + P RP + L
Sbjct: 222 DVIGVLEKGDRLPKP-DLCPPVLYTLM---TRCWDYDPSDRPRFTELVCSL 268
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 6e-25
Identities = 57/284 (20%), Positives = 104/284 (36%), Gaps = 55/284 (19%)
Query: 410 IGIGGQASVYRGEL--PSGEV---VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIV 464
+G G +VY+G +V VA+K+ + +E L+E + + + ++
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVC 80
Query: 465 KFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDC 524
+ G C L+ + + G L + + N +A ++Y+
Sbjct: 81 RLLGICLTST-VQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 525 FPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS-----------NWTEFAGTFGY 573
VHRD++++NVL+ + +++DFG+AK L W
Sbjct: 138 L---VHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM-------- 186
Query: 574 VAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDP-- 630
A E T + DV+S+GV E++ G P D + +EI
Sbjct: 187 -ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD------------GIPASEISSILE 233
Query: 631 ---RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
RLP P I + + + C +SRP + +
Sbjct: 234 KGERLPQP----PICTIDVYMIMVKCWMIDADSRPKFRELIIEF 273
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 6e-25
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 17/206 (8%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFH--SLLLSEISVQRE-FLNEIKALT 456
+D + +G G A V + E +G A K S V RE E+ L
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 457 EIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANA 516
++ H N++ + + L+ E + G L + L+ S+ E T+ IK + +
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSE---EEATSFIKQILDG 127
Query: 517 LSYMHHDCFPPIVHRDISSKNVLLSSEYEA----RVSDFGIAKFLKPGSSNWTEFAGTFG 572
++Y+H I H D+ +N++L + ++ DFG+A ++ G + GT
Sbjct: 128 VNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPE 183
Query: 573 YVAPE-LAYTMKVTEKCDVYSFGVLA 597
+VAPE + Y + + D++S GV+
Sbjct: 184 FVAPEIVNYE-PLGLEADMWSIGVIT 208
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 6e-25
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVK--KFHSLLLSEISVQRE-FLNEIKALT 456
+++ + +G G A V + + +G+ A K K L S V RE E+ L
Sbjct: 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63
Query: 457 EIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVR--TNVIKSVA 514
EIRH NI+ + + L+ E + G L + L+ S+ E T +K +
Sbjct: 64 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTE-----DEATQFLKQIL 118
Query: 515 NALSYMHHDCFPPIVHRDISSKNVLLSSEYEA----RVSDFGIAKFLKPGSSNWTEFAGT 570
+ + Y+H I H D+ +N++L + ++ DFGIA ++ G+ + GT
Sbjct: 119 DGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE-FKNIFGT 174
Query: 571 FGYVAPE-LAYTMKVTEKCDVYSFGVLA 597
+VAPE + Y + + D++S GV+
Sbjct: 175 PEFVAPEIVNYE-PLGLEADMWSIGVIT 201
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 7e-25
Identities = 35/297 (11%), Positives = 76/297 (25%), Gaps = 60/297 (20%)
Query: 410 IGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR--------- 459
+G + +GE V + + ++ E+ L +R
Sbjct: 86 LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAK 145
Query: 460 -------------HRNIVKFYGFCSHPRHSFLVYECL-------ERGSLAEILSNDGSIK 499
K R +++ + E+L + S
Sbjct: 146 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH 205
Query: 500 E-FSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558
+ R + V L+ +HH +VH + +++L ++ F +
Sbjct: 206 KSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTGFEHLV--R 260
Query: 559 PGSSNWTEFAGTFG---YVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFI 610
G+S + F A + +T D ++ G+ + P
Sbjct: 261 DGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLP--N- 317
Query: 611 SLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTV 667
+ I +P + ++ L+ L E R
Sbjct: 318 -----TDDAALGGSEWIFRSCKNIP-QPVRA-LLEGF------LRYPKEDRLLPLQA 361
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 1e-24
Identities = 54/208 (25%), Positives = 88/208 (42%), Gaps = 38/208 (18%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVK-----KFHSLLLSEISVQREFLNEIKALTEIR-HRN 462
IG G + V R +G AVK V+ E L ++ H +
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 463 IVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVR---------TNVIKSV 513
I+ FLV++ + +G L F ++ ++++S+
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGEL------------FDYLTEKVALSEKETRSIMRSL 209
Query: 514 ANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGY 573
A+S++H + IVHRD+ +N+LL + R+SDFG + L+PG E GT GY
Sbjct: 210 LEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK-LRELCGTPGY 265
Query: 574 VAPE-LAYTMKVTEK-----CDVYSFGV 595
+APE L +M T D+++ GV
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGV 293
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 1e-24
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 23/209 (11%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFH--SLLLSEISVQREFL-NEIKALT 456
+D + +G G A V + E +G A K S V RE + E+ L
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 457 EIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVR--TNVIKSVA 514
EI+H N++ + + L+ E + G L + L+ S+ E T +K +
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-----EEATEFLKQIL 124
Query: 515 NALSYMH-HDCFPPIVHRDISSKNVLLSSEYEA----RVSDFGIAKFLKPGSSNWTEFAG 569
N + Y+H I H D+ +N++L ++ DFG+A + G+ + G
Sbjct: 125 NGVYYLHSLQ----IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFG 179
Query: 570 TFGYVAPE-LAYTMKVTEKCDVYSFGVLA 597
T +VAPE + Y + + D++S GV+
Sbjct: 180 TPEFVAPEIVNYE-PLGLEADMWSIGVIT 207
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 2e-24
Identities = 48/203 (23%), Positives = 78/203 (38%), Gaps = 41/203 (20%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG G V + + A K + + F EI+ + + H NI++ Y
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAK---KIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVR---------TNVIKSVANALSY 519
+LV E G L F +V ++K V +A++Y
Sbjct: 74 TFEDNTDIYLVMELCTGGEL------------FERVVHKRVFRESDAARIMKDVLSAVAY 121
Query: 520 MH-HDCFPPIVHRDISSKNVLLSSEYEA---RVSDFGIAKFLKPGSSNWTEFAGTFGYVA 575
H + + HRD+ +N L ++ ++ DFG+A KPG GT YV+
Sbjct: 122 CHKLN----VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG-KMMRTKVGTPYYVS 176
Query: 576 PEL---AYTMKVTEKCDVYSFGV 595
P++ Y +CD +S GV
Sbjct: 177 PQVLEGLY----GPECDEWSAGV 195
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 2e-24
Identities = 75/298 (25%), Positives = 122/298 (40%), Gaps = 59/298 (19%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRGELPSGE----VVAVKKFHSLLLSEISVQREFLNE 451
EI R + + +CIG G V++G S E VA+K + V+ +FL E
Sbjct: 11 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDS--VREKFLQE 66
Query: 452 IKALTEIRHRNIVKFYGFCS-HPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNV 509
+ + H +IVK G + +P +++ E G L L S+ S I
Sbjct: 67 ALTMRQFDHPHIVKLIGVITENPV--WIIMELCTLGELRSFLQVRKYSLDLASLI---LY 121
Query: 510 IKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG----SSN-- 563
++ AL+Y+ F VHRDI+++NVL+SS ++ DFG++++++ +S
Sbjct: 122 AYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 178
Query: 564 ----WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSS 618
W APE + T DV+ FGV E++ G P
Sbjct: 179 LPIKWM---------APESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ---------- 219
Query: 619 NMNLSLNEILDP-----RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ N+++ RLP+P N L S++ C P RP + L
Sbjct: 220 --GVKNNDVIGRIENGERLPMP-PNCPPTLYSLM---TKCWAYDPSRRPRFTELKAQL 271
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 2e-24
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 23/205 (11%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
+ + + +G G V+R E S + K ++ V++E I L R
Sbjct: 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKE----ISILNIAR 59
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAE-ILSNDGSIKEFSWIVR--TNVIKSVANA 516
HRNI+ + +++E + + E I ++ + E R + + V A
Sbjct: 60 HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNE-----REIVSYVHQVCEA 114
Query: 517 LSYMH-HDCFPPIVHRDISSKNVLLSSEYEARV--SDFGIAKFLKPGSSNWTEFAGTFGY 573
L ++H H+ I H DI +N++ + + + +FG A+ LKPG + F Y
Sbjct: 115 LQFLHSHN----IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF-TAPEY 169
Query: 574 VAPE-LAYTMKVTEKCDVYSFGVLA 597
APE + + V+ D++S G L
Sbjct: 170 YAPEVHQHDV-VSTATDMWSLGTLV 193
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 2e-24
Identities = 50/206 (24%), Positives = 91/206 (44%), Gaps = 17/206 (8%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFH--SLLLSEISVQREFL-NEIKALT 456
+D + +G G A V + E +G A K S V RE + E+ L
Sbjct: 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70
Query: 457 EIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANA 516
++ H NI+ + + L+ E + G L + L+ S+ E + IK + +
Sbjct: 71 QVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIKQILDG 127
Query: 517 LSYMHHDCFPPIVHRDISSKNVLLSSEYEA----RVSDFGIAKFLKPGSSNWTEFAGTFG 572
++Y+H I H D+ +N++L + ++ DFG+A ++ G + GT
Sbjct: 128 VNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVE-FKNIFGTPE 183
Query: 573 YVAPE-LAYTMKVTEKCDVYSFGVLA 597
+VAPE + Y + + D++S GV+
Sbjct: 184 FVAPEIVNYE-PLGLEADMWSIGVIT 208
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 3e-24
Identities = 70/281 (24%), Positives = 119/281 (42%), Gaps = 46/281 (16%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
N+ + IG G A V + +G VA+K L+ S+Q+ F E++ + + H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF-REVRIMKILNHP 74
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKE------FSWIVRTNVIKSVAN 515
NIVK + + +L+ E G + + L G +KE F IV +
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIV---------S 125
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVA 575
A+ Y H IVHRD+ ++N+LL ++ +++DFG + G F G Y A
Sbjct: 126 AVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDA-FCGAPPYAA 181
Query: 576 PEL----AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631
PEL Y + DV+S GV+ ++ G P D N+ +L +
Sbjct: 182 PELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFD--------GQNLKELRERVLRGK 230
Query: 632 LPLP---SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
+P S + ++ L L + +P R T++ + +
Sbjct: 231 YRIPFYMSTDCENLLKRFLVL-------NPIKRGTLEQIMK 264
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 3e-24
Identities = 57/263 (21%), Positives = 103/263 (39%), Gaps = 16/263 (6%)
Query: 17 NLKGLYLYSNSLSGSVPGEIGNLMQ---LTNLEIDNNQLFGQIPR-----SLRNLASLNR 68
L + L + ++ + L I N + +I R S L SL
Sbjct: 250 TLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMI 309
Query: 69 VHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSI 128
H++ + ++ ++ + +S ++ LNF+ N T S+
Sbjct: 310 EHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSV 369
Query: 129 PPEIGKLYQLHKLDFSLNQI--VGEIPIELGNLKSLNYLVLNGNKL-SGNLPRVLGSLSE 185
L +L L N + ++ + N+ SL L ++ N L S R
Sbjct: 370 FQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429
Query: 186 LEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLG 245
+ L+LS+N L+GS+ L +KV L+L NN+ P ++ L L EL+++ N L
Sbjct: 430 ILVLNLSSNMLTGSVFRCLPPKVKV--LDLHNNRI-MSIPKDVTHLQALQELNVASNQL- 485
Query: 246 GEIPPQIC-NLESLEKLNVSHNN 267
+P + L SL+ + + N
Sbjct: 486 KSVPDGVFDRLTSLQYIWLHDNP 508
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 95.3 bits (237), Expect = 1e-20
Identities = 58/300 (19%), Positives = 108/300 (36%), Gaps = 23/300 (7%)
Query: 10 PSVGNFTNLKGLYLYSNSLSG-------SVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRN 62
+ L L L + L+ + E+ L N+ + + + + L
Sbjct: 212 QVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQ 271
Query: 63 LASLNRV---HLEQNHLTGNISEVFGIY-----PNLTFLDISHNNFYGEIWSSWGKCQQL 114
V ++ +T I Y +L + + F + + ++
Sbjct: 272 FFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEM 331
Query: 115 GTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSG 174
S+++ L+F+ N + LK L L+L N L
Sbjct: 332 NIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK- 390
Query: 175 NLPRV---LGSLSELEYLDLSTNKLSGSIPETLGNLL-KVHYLNLSNNQFRKEFPVELEK 230
N +V ++S LE LD+S N L+ + + LNLS+N L
Sbjct: 391 NFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCL-- 448
Query: 231 LVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYN 290
++ LDL +N + IP + +L++L++LNV+ N L + F+ + L I + N
Sbjct: 449 PPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 94.9 bits (236), Expect = 1e-20
Identities = 52/310 (16%), Positives = 96/310 (30%), Gaps = 23/310 (7%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVP--GEIGNLMQLTNLEIDNNQLFGQIPRS 59
N L I +L+ L L N +P E GNL +LT L + +
Sbjct: 110 NRLQ-NISC--CPMASLRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGLSAAKFRQLDLLP 165
Query: 60 LRNLA-SLNRVHLEQNHLTGNISEVFG----IYPNLTFLDISHNNFYGEIWSSWGKCQQL 114
+ +L S + L H+ G +E +L F S + + + QL
Sbjct: 166 VAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQL 225
Query: 115 GTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIP-----IELGNLKSLNYLVLNG 169
+ + N + L+ +L I + + + YL +
Sbjct: 226 SNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYN 285
Query: 170 NKLSGNLPRVLG-----SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEF 224
++ + R +L L + S +++ LS +
Sbjct: 286 LTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIH 345
Query: 225 PVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGL--IPSCFEGMHGL 282
V + L+ + N + L+ L+ L + N L + + M L
Sbjct: 346 MVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSL 405
Query: 283 SCIDISYNEL 292
+D+S N L
Sbjct: 406 ETLDVSLNSL 415
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 82.6 bits (204), Expect = 1e-16
Identities = 48/330 (14%), Positives = 96/330 (29%), Gaps = 52/330 (15%)
Query: 8 IPPSV-GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
+ + L+ L L N + L L++ +N+L I +ASL
Sbjct: 67 LRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRL-QNISCC--PMASL 123
Query: 67 NRVHLEQNHLTG-NISEVFGIYPNLTFLDISHNNF----YGEIWSSWGKCQQLGTLNFSM 121
+ L N + + FG LTFL +S F + C L +++ +
Sbjct: 124 RHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHI 183
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
E ++ L + ++ +L +L L+ KL+ + L
Sbjct: 184 KG----GETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLM 239
Query: 182 SL----------------------------------SELEYLDLSTNKLSGSIPETLGN- 206
+ +EYL++ ++ I
Sbjct: 240 TFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTY 299
Query: 207 ----LLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLN 262
L + ++ N F +++ LS + + S LN
Sbjct: 300 SETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLN 359
Query: 263 VSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
+ N + + + L + + N L
Sbjct: 360 FTQNVFTDSVFQGCSTLKRLQTLILQRNGL 389
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 81.1 bits (200), Expect = 3e-16
Identities = 58/332 (17%), Positives = 99/332 (29%), Gaps = 61/332 (18%)
Query: 16 TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL-RNLASLNRVHLEQN 74
K L L NS+S +I L +L L + +N++ + + L + + N
Sbjct: 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRI-RSLDFHVFLFNQDLEYLDVSHN 110
Query: 75 HLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQ------QLGTLNFSMNNITGSI 128
L NIS +L LD+S N+ + C+ +L L S +
Sbjct: 111 RLQ-NIS--CCPMASLRHLDLSFND-----FDVLPVCKEFGNLTKLTFLGLSAAKFR-QL 161
Query: 129 PPEIGKLYQLHK--LDFSLNQIVGEIPIELGNLK-SLNYLVLNGNKLSGNLPRVLGSLSE 185
L LD I G L ++ +LV + N L V S++
Sbjct: 162 DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQ--VNMSVNA 219
Query: 186 LEYLDLSTNKLSGSIPETLGNLL----------------------------------KVH 211
L +L LS KL+ + L L V
Sbjct: 220 LGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVE 279
Query: 212 YLNLSNNQFRK-----EFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHN 266
YLN+ N + EF L L + + + +S +
Sbjct: 280 YLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSIS 339
Query: 267 NLSGLIPSCFEGMHGLSCIDISYNELLGLIPN 298
+ + C + ++ + N +
Sbjct: 340 DTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQ 371
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 80.7 bits (199), Expect = 5e-16
Identities = 37/236 (15%), Positives = 78/236 (33%), Gaps = 33/236 (13%)
Query: 16 TNLKGLYLYSNSLSGSVPGEIGN-----LMQLTNLEIDNNQLFGQIPRSLRNLASLNRVH 70
++ L +Y+ +++ + E L L + N A +N
Sbjct: 276 RPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKM 335
Query: 71 LEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPP 130
L + + TFL+ + N F ++ ++L TL N + +
Sbjct: 336 LSISDTPFIHMVCPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLK-NFFK 394
Query: 131 EIGKLYQLHKLDFSLNQIV----GEIPIELGNLKSLNYLVLNGNK--------------- 171
+ L+ + +S+ L L+ N
Sbjct: 395 VALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLPPKVKV 454
Query: 172 --LSGN----LPRVLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQF 220
L N +P+ + L L+ L++++N+L S+P+ L + Y+ L +N +
Sbjct: 455 LDLHNNRIMSIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPW 509
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 72.6 bits (178), Expect = 2e-13
Identities = 42/218 (19%), Positives = 82/218 (37%), Gaps = 10/218 (4%)
Query: 111 CQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGN 170
+ +++S N+T +P ++ + L S N I ++ L L L L+ N
Sbjct: 30 NELESMVDYSNRNLT-HVPKDL--PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHN 86
Query: 171 KLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPV--EL 228
++ V +LEYLD+S N+L +I + + +L+LS N F PV E
Sbjct: 87 RIRSLDFHVFLFNQDLEYLDVSHNRLQ-NIS--CCPMASLRHLDLSFNDF-DVLPVCKEF 142
Query: 229 EKLVQLSELDLSHNFLGGEIPPQICNLE-SLEKLNVSHNNLSGLIPSCFEGMHGLSCIDI 287
L +L+ L LS + +L S L++ ++ G + + +
Sbjct: 143 GNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLV 202
Query: 288 SYNELLGLIPNSTGFQYDPIQALRGNRGLCGDVEGFQS 325
+ L + + L + + + +
Sbjct: 203 FHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT 240
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 68.0 bits (166), Expect = 4e-12
Identities = 44/243 (18%), Positives = 75/243 (30%), Gaps = 37/243 (15%)
Query: 85 GIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEI-GKLYQLHKLDF 143
+ P L +S N+ +L L S N I S+ + L LD
Sbjct: 49 DLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIR-SLDFHVFLFNQDLEYLDV 107
Query: 144 SLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPR--VLGSLSELEYLDLSTNKLSGSIP 201
S N++ I + SL +L L+ N LP G+L++L +L LS K
Sbjct: 108 SHNRLQ-NISC--CPMASLRHLDLSFNDFD-VLPVCKEFGNLTKLTFLGLSAAKFRQLDL 163
Query: 202 ETLGNL-LKVHYLNLSNNQFRKEFPVELEKL----------------------------V 232
+ +L L L+L + + L+ +
Sbjct: 164 LPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHL 223
Query: 233 QLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
QLS + L+ + LNV+ ++ + + Y +
Sbjct: 224 QLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNI 283
Query: 293 LGL 295
L
Sbjct: 284 YNL 286
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 62.2 bits (151), Expect = 3e-10
Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 26/170 (15%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N + ++ L+ L L N L + +++LE + L
Sbjct: 363 NVFTDSVFQGCSTLKRLQTLILQRNGLK-NFFKVALMTKNMSSLETLDVSL--------- 412
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
+ + ++ L++S N G ++ ++ L+
Sbjct: 413 -----------NSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHN 459
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYLVLNGN 170
N I SIP ++ L L +L+ + NQ+ +P L SL Y+ L+ N
Sbjct: 460 NRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDN 507
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} Length = 562 | Back alignment and structure |
|---|
Score = 47.6 bits (113), Expect = 1e-05
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
+ S A + ++ L L SN L+GSV + ++ L++ NN++ IP+ +
Sbjct: 413 NSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCL--PPKVKVLDLHNNRI-MSIPKDV 469
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNF 100
+L +L +++ N L VF +L ++ + N +
Sbjct: 470 THLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPW 509
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 4e-24
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 16/205 (7%)
Query: 398 IRATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALT 456
+ + + +G G V++ E +G +A K + + + E NEI +
Sbjct: 85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDK---EEVKNEISVMN 141
Query: 457 EIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAE-ILSNDGSIKEFSWIVRTNVIKSVAN 515
++ H N+++ Y LV E ++ G L + I+ ++ E I +K +
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTI---LFMKQICE 198
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARV--SDFGIAKFLKPGSSNWTEFAGTFGY 573
+ +MH I+H D+ +N+L + ++ DFG+A+ KP F GT +
Sbjct: 199 GIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF-GTPEF 254
Query: 574 VAPE-LAYTMKVTEKCDVYSFGVLA 597
+APE + Y V+ D++S GV+A
Sbjct: 255 LAPEVVNYD-FVSFPTDMWSVGVIA 278
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 5e-24
Identities = 66/288 (22%), Positives = 111/288 (38%), Gaps = 57/288 (19%)
Query: 407 EQCIGIGGQASVYRGEL----PSGEV-VAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
+ +G G +V++G S ++ V +K S + + + A+ + H
Sbjct: 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK--SGRQSFQAVTDHMLAIGSLDHA 75
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIKSVANALSYM 520
+IV+ G C LV + L GSL + + + G++ + N +A + Y+
Sbjct: 76 HIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGPQLLL---NWGVQIAKGMYYL 131
Query: 521 HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS-----------NWTEFAG 569
VHR+++++NVLL S + +V+DFG+A L P W
Sbjct: 132 EEHGM---VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM---- 184
Query: 570 TFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEIL 628
A E + K T + DV+S+GV E++ G P L L E+
Sbjct: 185 -----ALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYA------------GLRLAEVP 227
Query: 629 DP-----RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
D RL P Q I + V + C RPT + +
Sbjct: 228 DLLEKGERLAQP----QICTIDVYMVMVKCWMIDENIRPTFKELANEF 271
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 6e-24
Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 35/201 (17%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFY 467
+G G + + S + AVK + + EI AL H NIVK +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ------KEITALKLCEGHPNIVKLH 72
Query: 468 GFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRT---------NVIKSVANALS 518
H+FLV E L G L F I + +++ + +A+S
Sbjct: 73 EVFHDQLHTFLVMELLNGGEL------------FERIKKKKHFSETEASYIMRKLVSAVS 120
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSEYEA---RVSDFGIAKFLKPGSSNWTEFAGTFGYVA 575
+MH +VHRD+ +N+L + E + ++ DFG A+ P + T Y A
Sbjct: 121 HMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAA 177
Query: 576 PELAYTMKVTEKCDVYSFGVL 596
PEL E CD++S GV+
Sbjct: 178 PELLNQNGYDESCDLWSLGVI 198
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 2e-23
Identities = 47/216 (21%), Positives = 86/216 (39%), Gaps = 44/216 (20%)
Query: 407 EQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIV 464
E +G G A V L + + AVK + ++ E++ L + + HRN++
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVK---IIEKQPGHIRSRVFREVEMLYQCQGHRNVL 74
Query: 465 KFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVR---------TNVIKSVAN 515
+ F +LV+E + GS+ S I + + V++ VA+
Sbjct: 75 ELIEFFEEEDRFYLVFEKMRGGSI------------LSHIHKRRHFNELEASVVVQDVAS 122
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEA---RVSDFGIAKFLKPGSS-------NWT 565
AL ++H I HRD+ +N+L + ++ DF + +K
Sbjct: 123 ALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELL 179
Query: 566 EFAGTFGYVAPE-----LAYTMKVTEKCDVYSFGVL 596
G+ Y+APE ++CD++S GV+
Sbjct: 180 TPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVI 215
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 101 bits (252), Expect = 3e-23
Identities = 36/300 (12%), Positives = 83/300 (27%), Gaps = 65/300 (21%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR--------- 459
+G + + +GE V + + ++ E+ L +R
Sbjct: 81 LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAK 140
Query: 460 ----------------HRNIVKFYGFCSHPRHS--FLVYECLE--RGSLAEILSNDGSIK 499
+ +++ F +Y ++ + E+L + S
Sbjct: 141 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH 200
Query: 500 E-FSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558
+ R + V L+ +HH +VH + +++L ++ F +
Sbjct: 201 KSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTGFEHLV--R 255
Query: 559 PGSSNWTEFAGTFGYVAPEL-----------AYTMKVTEKCDVYSFGVLALEVIKGKHPR 607
G+ + + G+ PEL +T D ++ G++ + P
Sbjct: 256 DGAR--VVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLP- 312
Query: 608 DFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTV 667
+ I +P ++ L+ L E R
Sbjct: 313 -I------TKDAALGGSEWIFRSCKNIPQ-PVRA-LLE------GFLRYPKEDRLLPLQA 357
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 5e-23
Identities = 68/301 (22%), Positives = 111/301 (36%), Gaps = 58/301 (19%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRGELPSGE----VVAVKKFHSLLLSEISVQREFLNE 451
I ++ + IG G VY G L + AVK + + ++I +FL E
Sbjct: 19 VIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTE 76
Query: 452 IKALTEIRHRNIVKFYGFCSHPRHS-FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVI 510
+ + H N++ G C S +V ++ G L + N+ +
Sbjct: 77 GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFG 134
Query: 511 KSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL-------KPGSSN 563
VA + Y+ F VHRD++++N +L ++ +V+DFG+A+ + +
Sbjct: 135 LQVAKGMKYLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG 191
Query: 564 ------WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHP------RDFI 610
W A E T K T K DV+SFGVL E++ +G P D
Sbjct: 192 AKLPVKWM---------ALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT 242
Query: 611 SLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670
L RL P D L ++ L C E RP+ +
Sbjct: 243 VYLLQGR-------------RLLQP-EYCPDPLYEVM---LKCWHPKAEMRPSFSELVSR 285
Query: 671 L 671
+
Sbjct: 286 I 286
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 99.3 bits (248), Expect = 6e-23
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 35/205 (17%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR-NIVKFY 467
+G G A V + +G+ A K + E L+EI L + ++ +
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRA-EILHEIAVLELAKSCPRVINLH 95
Query: 468 GFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVR-----------TNVIKSVANA 516
+ L+ E G + FS + +IK +
Sbjct: 96 EVYENTSEIILILEYAAGGEI------------FSLCLPELAEMVSENDVIRLIKQILEG 143
Query: 517 LSYMHHDCFPPIVHRDISSKNVLLSSEYEA---RVSDFGIAKFLKPGSSNWTEFAGTFGY 573
+ Y+H + IVH D+ +N+LLSS Y ++ DFG+++ + E GT Y
Sbjct: 144 VYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE-LREIMGTPEY 199
Query: 574 VAPE-LAYTMKVTEKCDVYSFGVLA 597
+APE L Y +T D+++ G++A
Sbjct: 200 LAPEILNYD-PITTATDMWNIGIIA 223
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 95.4 bits (238), Expect = 1e-22
Identities = 32/159 (20%), Positives = 63/159 (39%), Gaps = 7/159 (4%)
Query: 113 QLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKL 172
L + + N+T + I + + L + P + L +L L + G +
Sbjct: 45 SLTYITLANINVT-DLTG-IEYAHNIKDLTINNIHATNYNP--ISGLSNLERLRIMGKDV 100
Query: 173 SGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLV 232
+ + L L+ L LD+S + SI + L KV+ ++LS N + L+ L
Sbjct: 101 TSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLP 159
Query: 233 QLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGL 271
+L L++ + + + I + L +L + G
Sbjct: 160 ELKSLNIQFDGV-HDYRG-IEDFPKLNQLYAFSQTIGGK 196
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 3e-22
Identities = 28/180 (15%), Positives = 65/180 (36%), Gaps = 7/180 (3%)
Query: 113 QLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKL 172
+ + + ++ L + + + IE ++ L +N
Sbjct: 21 TFKAYLNGLLGQSSTANITEAQMNSLTYITLANINVTDLTGIE--YAHNIKDLTINNIHA 78
Query: 173 SGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLV 232
+ P + LS LE L + ++ L L + L++S++ ++ L
Sbjct: 79 TNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLP 136
Query: 233 QLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
+++ +DLS+N +I P + L L+ LN+ + + E L+ + +
Sbjct: 137 KVNSIDLSYNGAITDIMP-LKTLPELKSLNIQFDGVHDYRG--IEDFPKLNQLYAFSQTI 193
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 4e-20
Identities = 31/206 (15%), Positives = 66/206 (32%), Gaps = 34/206 (16%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQ 73
F L +S + + LT + + N + L +
Sbjct: 21 TFKAYLNGLLGQSSTA---NITEAQMNSLTYITLANINV-----TDLTGIEYA------- 65
Query: 74 NHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIG 133
N+ L I++ + ++ L L ++T P +
Sbjct: 66 --------------HNIKDLTINNIHA--TNYNPISGLSNLERLRIMGKDVTSDKIPNLS 109
Query: 134 KLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLST 193
L L LD S + I ++ L +N + L+ N ++ L +L EL+ L++
Sbjct: 110 GLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQF 168
Query: 194 NKLSGSIPETLGNLLKVHYLNLSNNQ 219
+ + + + K++ L +
Sbjct: 169 DGVHDYRG--IEDFPKLNQLYAFSQT 192
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 78.5 bits (194), Expect = 8e-17
Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 5/135 (3%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQ 73
N+K L + + + P I L L L I + +L L SL + +
Sbjct: 64 YAHNIKDLTINNIHATNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISH 121
Query: 74 NHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIG 133
+ +I P + +D+S+N +I +L +LN + + I
Sbjct: 122 SAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGVH-DYRG-IE 178
Query: 134 KLYQLHKLDFSLNQI 148
+L++L I
Sbjct: 179 DFPKLNQLYAFSQTI 193
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 73.5 bits (181), Expect = 4e-15
Identities = 28/159 (17%), Positives = 59/159 (37%), Gaps = 9/159 (5%)
Query: 140 KLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGS 199
+ +Q IP K+ +L + + ++ L Y+ L+ ++
Sbjct: 5 QTGLKASQDNVNIP--DSTFKAYLNGLLGQSSTANITE---AQMNSLTYITLANINVT-D 58
Query: 200 IPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLE 259
+ + + L ++N P + L L L + + + P + L SL
Sbjct: 59 L-TGIEYAHNIKDLTINNIHATNYNP--ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115
Query: 260 KLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPN 298
L++SH+ I + + ++ ID+SYN + I
Sbjct: 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMP 154
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} Length = 197 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 6e-12
Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 3/115 (2%)
Query: 12 VGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHL 71
+ +NL+ L + ++ + L LT L+I ++ I + L +N + L
Sbjct: 84 ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143
Query: 72 EQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITG 126
N +I + + P L L+I + + +L L I G
Sbjct: 144 SYNGAITDIMPLKTL-PELKSLNIQFDGV--HDYRGIEDFPKLNQLYAFSQTIGG 195
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 98.7 bits (246), Expect = 1e-22
Identities = 52/245 (21%), Positives = 90/245 (36%), Gaps = 51/245 (20%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQRE--FLNEIKALTE 457
K + + IG G V E + + A+K + + +I+ + E++ + +
Sbjct: 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKK 84
Query: 458 IRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRT---------- 507
+ H NI + Y ++ LV E G L + L+ +
Sbjct: 85 LHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPE 144
Query: 508 ---------------------------NVIKSVANALSYMHHDCFPPIVHRDISSKNVLL 540
N+++ + +AL Y+H+ I HRDI +N L
Sbjct: 145 CNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLF 201
Query: 541 SSEYEARV--SDFGIAKFLKPGSSN----WTEFAGTFGYVAPEL--AYTMKVTEKCDVYS 592
S+ + DFG++K ++ T AGT +VAPE+ KCD +S
Sbjct: 202 STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261
Query: 593 FGVLA 597
GVL
Sbjct: 262 AGVLL 266
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 96.9 bits (242), Expect = 2e-22
Identities = 64/294 (21%), Positives = 118/294 (40%), Gaps = 75/294 (25%)
Query: 418 VYRGELPSGE------VVAVKKFHSLLLSEISVQ--REFLNEIKALTEIRHRNIVKFYGF 469
V+ E + +VAVK L + ++ ++F E + LT ++H +IVKFYG
Sbjct: 31 VFLAECYNLSPTKDKMLVAVKA-----LKDPTLAARKDFQREAELLTNLQHEHIVKFYGV 85
Query: 470 CSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKS-------------VANA 516
C +V+E ++ G L + L G + K +A+
Sbjct: 86 CGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASG 145
Query: 517 LSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL-------KPGSSN----WT 565
+ Y+ F VHRD++++N L+ + ++ DFG+++ + G + W
Sbjct: 146 MVYLASQHF---VHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 202
Query: 566 EFAGTFGYVAPE-LAYTMKVTEKCDVYSFGVLALEVI-KGKHP------RDFISLLSSSS 617
PE + Y K T + DV+SFGV+ E+ GK P + I ++
Sbjct: 203 ---------PPESIMYR-KFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGR 252
Query: 618 SNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
L P R ++ ++ L C + P+ R ++ + ++L
Sbjct: 253 -------------VLERP-RVCPKEVYDVM---LGCWQREPQQRLNIKEIYKIL 289
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 2e-22
Identities = 68/304 (22%), Positives = 112/304 (36%), Gaps = 64/304 (21%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRGELPSGE----VVAVKKFHSLLLSEISVQRE---F 448
I +++ IG G VY GE A+K LS I+ ++ F
Sbjct: 15 LIPHERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKS-----LSRITEMQQVEAF 69
Query: 449 LNEIKALTEIRHRNIVKFYGFCSHPR-HSFLVYECLERGSLAEILSNDGSIKEFSWIVRT 507
L E + + H N++ G P ++ + G L + + + + +
Sbjct: 70 LREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ--RNPTVKDLI 127
Query: 508 NVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN---- 563
+ VA + Y+ F VHRD++++N +L + +V+DFG+A+ +
Sbjct: 128 SFGLQVARGMEYLAEQKF---VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQ 184
Query: 564 ---------WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHP------R 607
WT A E T + T K DV+SFGVL E++ +G P
Sbjct: 185 HRHARLPVKWT---------ALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF 235
Query: 608 DFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTV 667
D L+ RLP P D L ++ C E P RPT + +
Sbjct: 236 DLTHFLAQGR-------------RLPQP-EYCPDSLYQVM---QQCWEADPAVRPTFRVL 278
Query: 668 CQLL 671
+
Sbjct: 279 VGEV 282
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 98.3 bits (245), Expect = 3e-22
Identities = 67/293 (22%), Positives = 112/293 (38%), Gaps = 42/293 (14%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRGELPSGE----VVAVKKFHSLLLSEISVQREFLNE 451
I ++ + IG G VY G L + AVK + + ++I +FL E
Sbjct: 83 VIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTE 140
Query: 452 IKALTEIRHRNIVKFYGFCSHPRHS-FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVI 510
+ + H N++ G C S +V ++ G L + N+ +
Sbjct: 141 GIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFG 198
Query: 511 KSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT 570
VA + ++ F VHRD++++N +L ++ +V+DFG+A+ + + T
Sbjct: 199 LQVAKGMKFLASKKF---VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH-NKT 254
Query: 571 FGYV-----APELAYTMKVTEKCDVYSFGVLALEVI-KGKHP------RDFISLLSSSSS 618
+ A E T K T K DV+SFGVL E++ +G P D L
Sbjct: 255 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--- 311
Query: 619 NMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
RL P D L ++ L C E RP+ + +
Sbjct: 312 ----------GRRLLQP-EYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRI 350
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 96.3 bits (240), Expect = 3e-22
Identities = 59/237 (24%), Positives = 88/237 (37%), Gaps = 41/237 (17%)
Query: 11 SVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVH 70
V + + +L+ ++P ++ T L + N L+ +L L +++
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 71 LEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPP 130
L++ LT +V G P L LD+SHN QL S+P
Sbjct: 62 LDRAELT--KLQVDGTLPVLGTLDLSHN--------------QLQ-----------SLPL 94
Query: 131 EIGKLYQLHKLDFSLNQIVGEIPIELG---NLKSLNYLVLNGNKLSGNLP-RVLGSLSEL 186
L L LD S N++ + LG L L L L GN+L LP +L +L
Sbjct: 95 LGQTLPALTVLDVSFNRLTS---LPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPKL 150
Query: 187 EYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHN 242
E L L+ N L+ +P L L + L L N P L L N
Sbjct: 151 EKLSLANNNLT-ELPAGLLNGLENLDTLLLQENSL-YTIPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 90.2 bits (224), Expect = 4e-20
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 8/178 (4%)
Query: 116 TLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175
+N N+T ++PP++ L S N + L L L L+ +L+
Sbjct: 14 EVNCDKRNLT-ALPPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELT-K 69
Query: 176 LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLS 235
L V G+L L LDLS N+L S+P L + L++S N+ L L +L
Sbjct: 70 LQ-VDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQ 127
Query: 236 ELDLSHNFLGGEIPPQIC-NLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
EL L N L +PP + LEKL++++NNL+ L G+ L + + N L
Sbjct: 128 ELYLKGNELK-TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSL 184
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 2e-14
Identities = 47/220 (21%), Positives = 71/220 (32%), Gaps = 58/220 (26%)
Query: 2 NHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
N L + +T L L L +LT L++D
Sbjct: 41 NLLY-TFSLATLMPYTRLTQLNLDRA--------------ELTKLQVDG----------- 74
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFS 120
L L + L N L ++ + P LT LD+S
Sbjct: 75 -TLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSF----------------------- 109
Query: 121 MNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIEL-GNLKSLNYLVLNGNKLSGNLPR 178
N +T S+P L +L +L N++ +P L L L L N L+
Sbjct: 110 -NRLT-SLPLGALRGLGELQELYLKGNELK-TLPPGLLTPTPKLEKLSLANNNLTELPAG 166
Query: 179 VLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNN 218
+L L L+ L L N L +IP+ + + L N
Sbjct: 167 LLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGN 205
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A Length = 290 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 4e-11
Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 12/138 (8%)
Query: 158 NLKSLNYLVLNGNKLS---GNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLN 214
+ S + + L+ +LP + L LS N L TL ++ LN
Sbjct: 8 KVASHLEVNCDKRNLTALPPDLP------KDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 215 LSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPS 274
L + + V+ L L LDLSHN L +P L +L L+VS N L+ L
Sbjct: 62 LDRAELT-KLQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLG 118
Query: 275 CFEGMHGLSCIDISYNEL 292
G+ L + + NEL
Sbjct: 119 ALRGLGELQELYLKGNEL 136
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 4e-22
Identities = 45/210 (21%), Positives = 82/210 (39%), Gaps = 45/210 (21%)
Query: 407 EQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIV 464
+Q +G+G V +G+ A+K + + E+ + +IV
Sbjct: 34 KQVLGLGVNGKVLECFHRRTGQKCALKL--------LYDSPKARQEVDHHWQASGGPHIV 85
Query: 465 KFYGFCSHPRHS----FLVYECLERGSLAEILSNDGSIKEFSWIVR-----------TNV 509
+ H ++ EC+E G L FS I +
Sbjct: 86 CILDVYENMHHGKRCLLIIMECMEGGEL------------FSRIQERGDQAFTEREAAEI 133
Query: 510 IKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEA---RVSDFGIAKFLKPGSSNWTE 566
++ + A+ ++H I HRD+ +N+L +S+ + +++DFG AK +
Sbjct: 134 MRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA--LQT 188
Query: 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGVL 596
T YVAPE+ K + CD++S GV+
Sbjct: 189 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 218
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 97.0 bits (242), Expect = 4e-22
Identities = 69/288 (23%), Positives = 113/288 (39%), Gaps = 68/288 (23%)
Query: 418 VYRGEL------PSGEVVAVKKFHSLLLSEISVQRE---FLNEIKALTEIRHRNIVKFYG 468
VY G++ PS VAVK L E+ +++ FL E +++ H+NIV+ G
Sbjct: 46 VYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 100
Query: 469 FCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIK---SVANALSYMHHDC 524
F++ E + G L L + S + +++ +A Y+ +
Sbjct: 101 VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH 160
Query: 525 FPPIVHRDISSKNVLLSSEYEARV---SDFGIAKFL-------KPGSSN----WTEFAGT 570
F +HRDI+++N LL+ RV DFG+A+ + K G + W
Sbjct: 161 F---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWM----- 212
Query: 571 FGYVAPE-LAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEIL 628
PE T K D +SFGVL E+ G P + S E+L
Sbjct: 213 ----PPEAFMEG-IFTSKTDTWSFGVLLWEIFSLGYMPY------------PSKSNQEVL 255
Query: 629 DP-----RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ R+ P +N + I+ C + PE RP + + +
Sbjct: 256 EFVTSGGRMDPP-KNCPGPVYRIM---TQCWQHQPEDRPNFAIILERI 299
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 97.9 bits (244), Expect = 5e-22
Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 44/210 (20%)
Query: 407 EQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIV 464
Q +G+G V + + E A+K + + E++ + +IV
Sbjct: 67 SQVLGLGINGKVLQIFNKRTQEKFALKM--------LQDCPKARREVELHWRASQCPHIV 118
Query: 465 KFYGFC----SHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVR-----------TNV 509
+ + + +V ECL+ G L FS I + +
Sbjct: 119 RIVDVYENLYAGRKCLLIVMECLDGGEL------------FSRIQDRGDQAFTEREASEI 166
Query: 510 IKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEA---RVSDFGIAKFLKPGSSNWTE 566
+KS+ A+ Y+H I HRD+ +N+L +S+ +++DFG AK +S T
Sbjct: 167 MKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTT 222
Query: 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGVL 596
T YVAPE+ K + CD++S GV+
Sbjct: 223 PCYTPYYVAPEVLGPEKYDKSCDMWSLGVI 252
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 5e-22
Identities = 67/293 (22%), Positives = 115/293 (39%), Gaps = 74/293 (25%)
Query: 418 VYRGELPSGE------VVAVKKFHSLLLSEISVQ--REFLNEIKALTEIRHRNIVKFYGF 469
V+ E + +VAVK L E S ++F E + LT ++H++IV+F+G
Sbjct: 57 VFLAECHNLLPEQDKMLVAVKA-----LKEASESARQDFQREAELLTMLQHQHIVRFFGV 111
Query: 470 CSHPRHSFLVYECLERGSLAEIL------------SNDGSIKEFSWIVRTNVIKSVANAL 517
C+ R +V+E + G L L D + V VA +
Sbjct: 112 CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGM 171
Query: 518 SYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL------KPGSSN-----WTE 566
Y+ F VHRD++++N L+ ++ DFG+++ + + G W
Sbjct: 172 VYLAGLHF---VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWM- 227
Query: 567 FAGTFGYVAPE-LAYTMKVTEKCDVYSFGVLALEVI-KGKHP------RDFISLLSSSSS 618
PE + Y K T + DV+SFGV+ E+ GK P + I ++
Sbjct: 228 --------PPESILYR-KFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGR- 277
Query: 619 NMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
L P R ++ +I+ C + P+ R +++ V L
Sbjct: 278 ------------ELERP-RACPPEVYAIM---RGCWQREPQQRHSIKDVHARL 314
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 99.2 bits (247), Expect = 9e-22
Identities = 75/293 (25%), Positives = 126/293 (43%), Gaps = 49/293 (16%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRGEL--PSGEV--VAVKKFHSLLLSEISVQREFLNE 451
EI R + + +CIG G V++G P VA+K + + SV+ +FL E
Sbjct: 386 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--TSDSVREKFLQE 441
Query: 452 IKALTEIRHRNIVKFYGFCS-HPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNV 509
+ + H +IVK G + +P +++ E G L L S+ S I
Sbjct: 442 ALTMRQFDHPHIVKLIGVITENPV--WIIMELCTLGELRSFLQVRKFSLDLASLI---LY 496
Query: 510 IKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAG 569
++ AL+Y+ F VHRDI+++NVL+SS ++ DFG++++++ + T +
Sbjct: 497 AYQLSTALAYLESKRF---VHRDIAARNVLVSSNDCVKLGDFGLSRYME----DSTYYKA 549
Query: 570 TFGYV-----APELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLS 623
+ G + APE + T DV+ FGV E++ G P +
Sbjct: 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ------------GVK 597
Query: 624 LNEILDP-----RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
N+++ RLP+P N L S++ C P RP + L
Sbjct: 598 NNDVIGRIENGERLPMP-PNCPPTLYSLM---TKCWAYDPSRRPRFTELKAQL 646
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 9e-22
Identities = 55/290 (18%), Positives = 112/290 (38%), Gaps = 68/290 (23%)
Query: 418 VYRGELPSGE------VVAVKKFHSLLLSEISVQRE---FLNEIKALTEIRHRNIVKFYG 468
VY G VA+K ++E + RE FLNE + E ++V+ G
Sbjct: 41 VYEGVAKGVVKDEPETRVAIK-----TVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG 95
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKS-------VANALSYMH 521
S + + ++ E + RG L L + + ++ + +A+ ++Y++
Sbjct: 96 VVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN 155
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL------KPGSSN-----WTEFAGT 570
+ F VHRD++++N +++ ++ ++ DFG+ + + + G W
Sbjct: 156 ANKF---VHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWM----- 207
Query: 571 FGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHP------RDFISLLSSSSSNMNLS 623
+PE T DV+SFGV+ E+ + P + +
Sbjct: 208 ----SPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG------ 257
Query: 624 LNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673
L P N D L ++ +C + +P+ RP+ + + +
Sbjct: 258 -------LLDKP-DNCPDMLFELM---RMCWQYNPKMRPSFLEIISSIKE 296
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 1e-21
Identities = 48/244 (19%), Positives = 85/244 (34%), Gaps = 38/244 (15%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL-RNLAS 65
IP ++ + K L L N L + +L L++ ++ I ++L+
Sbjct: 21 KIPDNL--PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEI-QTIEDGAYQSLSH 77
Query: 66 LNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNIT 125
L+ + L N + F L L N+
Sbjct: 78 LSTLILTGNPIQSLALGAF------------------------SGLSSLQKLVAVETNLA 113
Query: 126 GSIPPEI-GKLYQLHKLDFSLNQIVGEIPIE--LGNLKSLNYLVLNGNKLSGNLPRVLGS 182
S+ G L L +L+ + N I + NL +L +L L+ NK+ L
Sbjct: 114 -SLENFPIGHLKTLKELNVAHNLIQ-SFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV 171
Query: 183 LSELEY----LDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELD 238
L ++ LDLS N ++ I +++ L L NQ + ++L L ++
Sbjct: 172 LHQMPLLNLSLDLSLNPMN-FIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIW 230
Query: 239 LSHN 242
L N
Sbjct: 231 LHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 9e-21
Identities = 59/242 (24%), Positives = 92/242 (38%), Gaps = 40/242 (16%)
Query: 56 IPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLG 115
+P S +NL L N L S F +P L LD+S
Sbjct: 26 LPFSTKNL------DLSFNPLRHLGSYSFFSFPELQVLDLSRCE---------------- 63
Query: 116 TLNFSMNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIEL-GNLKSLNYLVLNGNKLS 173
I +I L L L + N I + + L SL LV L+
Sbjct: 64 --------IQ-TIEDGAYQSLSHLSTLILTGNPI-QSLALGAFSGLSSLQKLVAVETNLA 113
Query: 174 GNLPRVLGSLSELEYLDLSTNKL-SGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLV 232
+G L L+ L+++ N + S +PE NL + +L+LS+N+ + + +L L
Sbjct: 114 SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLH 173
Query: 233 QL----SELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDIS 288
Q+ LDLS N + I P L++L + N L + F+ + L I +
Sbjct: 174 QMPLLNLSLDLSLNPM-NFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLH 232
Query: 289 YN 290
N
Sbjct: 233 TN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 3e-13
Identities = 34/172 (19%), Positives = 64/172 (37%), Gaps = 26/172 (15%)
Query: 2 NHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQL-FGQIPRS 59
N + ++ ++L+ L +L+ IG+L L L + +N + ++P
Sbjct: 86 NPIQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY 144
Query: 60 LRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNF 119
NL +L + L N + + + L++S L+
Sbjct: 145 FSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLS--------------------LDL 184
Query: 120 SMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYLVLNGN 170
S+N + I P K +L +L NQ+ +P L SL + L+ N
Sbjct: 185 SLNPMN-FIQPGAFKEIRLKELALDTNQLK-SVPDGIFDRLTSLQKIWLHTN 234
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* Length = 276 | Back alignment and structure |
|---|
Score = 57.7 bits (140), Expect = 3e-09
Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 26/141 (18%)
Query: 161 SLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQF 220
S L L+ N L S EL+ LDLS ++ +I + +
Sbjct: 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIED---------------GAY 72
Query: 221 RKEFPVELEKLVQLSELDLSHNFLGGEIPPQI-CNLESLEKLNVSHNNLSGLIPSCFEGM 279
+ L LS L L+ N + + L SL+KL NL+ L +
Sbjct: 73 QS--------LSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHL 123
Query: 280 HGLSCIDISYNELLGLIPNST 300
L +++++N +
Sbjct: 124 KTLKELNVAHNLIQSFKLPEY 144
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 95.5 bits (238), Expect = 1e-21
Identities = 50/285 (17%), Positives = 104/285 (36%), Gaps = 61/285 (21%)
Query: 418 VYRGELPSGE----VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS-- 471
V +L + VAVK + +++ ++ EFL E + E H ++ K G
Sbjct: 39 VREAQLKQEDGSFVKVAVKMLKADIIASSDIE-EFLREAACMKEFDHPHVAKLVGVSLRS 97
Query: 472 ----HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIK---SVANALSYMHHDC 524
++ ++ G L L + + +++ +A + Y+
Sbjct: 98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN 157
Query: 525 FPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL------KPGSSN-----WTEFAGTFGY 573
F +HRD++++N +L+ + V+DFG+++ + + G ++ W
Sbjct: 158 F---IHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWL-------- 206
Query: 574 VAPELAYTMKVTEKCDVYSFGVLALEVI-------KGKHPRDFISLLSSSSSNMNLSLNE 626
A E T DV++FGV E++ G + + L +
Sbjct: 207 -ALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN--------- 256
Query: 627 ILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
RL P +++ ++ C P+ RP+ + L
Sbjct: 257 ----RLKQP-PECMEEVYDLM---YQCWSADPKQRPSFTCLRMEL 293
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 96.3 bits (240), Expect = 1e-21
Identities = 69/288 (23%), Positives = 113/288 (39%), Gaps = 68/288 (23%)
Query: 418 VYRGEL------PSGEVVAVKKFHSLLLSEISVQRE---FLNEIKALTEIRHRNIVKFYG 468
VY G++ PS VAVK L E+ +++ FL E +++ H+NIV+ G
Sbjct: 87 VYEGQVSGMPNDPSPLQVAVKT-----LPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 141
Query: 469 FCSHPRHSFLVYECLERGSLAEIL-SNDGSIKEFSWIVRTNVIK---SVANALSYMHHDC 524
F++ E + G L L + S + +++ +A Y+ +
Sbjct: 142 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH 201
Query: 525 FPPIVHRDISSKNVLLSSEYEARV---SDFGIAKFL-------KPGSSN----WTEFAGT 570
F +HRDI+++N LL+ RV DFG+A+ + K G + W
Sbjct: 202 F---IHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWM----- 253
Query: 571 FGYVAPE-LAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEIL 628
PE T K D +SFGVL E+ G P + S E+L
Sbjct: 254 ----PPEAFMEG-IFTSKTDTWSFGVLLWEIFSLGYMPY------------PSKSNQEVL 296
Query: 629 DP-----RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ R+ P +N + I+ C + PE RP + + +
Sbjct: 297 EFVTSGGRMDPP-KNCPGPVYRIM---TQCWQHQPEDRPNFAIILERI 340
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 1e-21
Identities = 59/284 (20%), Positives = 99/284 (34%), Gaps = 60/284 (21%)
Query: 418 VYRGELPSGE----VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS-- 471
V G L + VAVK S+ EFL+E + + H N+++ G C
Sbjct: 50 VMEGNLKQEDGTSLKVAVKTMKLDNSSQ-REIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108
Query: 472 ---HPRHSFLVYECLERGSLAEIL---SNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF 525
++ ++ G L L + K + +A + Y+ + F
Sbjct: 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNF 168
Query: 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFL-------KPGSSN----WTEFAGTFGYV 574
+HRD++++N +L + V+DFG++K + + + W
Sbjct: 169 ---LHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI--------- 216
Query: 575 APELAYTMKVTEKCDVYSFGVLALEVI-KGKHP------RDFISLLSSSSSNMNLSLNEI 627
A E T K DV++FGV E+ +G P + L
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH---------- 266
Query: 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
RL P + D+L I+ C P RPT + L
Sbjct: 267 ---RLKQP-EDCLDELYEIM---YSCWRTDPLDRPTFSVLRLQL 303
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 2e-21
Identities = 54/255 (21%), Positives = 89/255 (34%), Gaps = 40/255 (15%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQ 73
F L S++ +V L + + +N+ + +S++ + L
Sbjct: 22 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDI-----KSVQGIQYL------- 67
Query: 74 NHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIG 133
PN+T L ++ N + LG L N + + +
Sbjct: 68 --------------PNVTKLFLNGNKL--TDIKPLANLKNLGWLFLDENKVK-DLSS-LK 109
Query: 134 KLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLST 193
L +L L N I +I L +L L L L NK++ VL L++L+ L L
Sbjct: 110 DLKKLKSLSLEHNGIS-DIN-GLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLED 165
Query: 194 NKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQIC 253
N++S I L L K+ L LS N L L L L+L +
Sbjct: 166 NQIS-DIVP-LAGLTKLQNLYLSKNHISDLRA--LAGLKNLDVLELFSQECLNKPINHQS 221
Query: 254 NLESLEKLNVSHNNL 268
NL + + +L
Sbjct: 222 NLVVPNTVKNTDGSL 236
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 2e-19
Identities = 58/260 (22%), Positives = 103/260 (39%), Gaps = 40/260 (15%)
Query: 10 PSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRV 69
+ ++ + ++ + SV G I L +T L ++ N+L ++ LA+L
Sbjct: 40 VTQNELNSIDQIIANNSDIK-SVQG-IQYLPNVTKLFLNGNKL-----TDIKPLANL--- 89
Query: 70 HLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIP 129
NL +L + N + SS ++L +L+ N I+ I
Sbjct: 90 ------------------KNLGWLFLDENKV--KDLSSLKDLKKLKSLSLEHNGIS-DIN 128
Query: 130 PEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYL 189
+ L QL L N+I +I + L L L+ L L N++S ++ L L++L+ L
Sbjct: 129 G-LVHLPQLESLYLGNNKIT-DITV-LSRLTKLDTLSLEDNQIS-DIV-PLAGLTKLQNL 183
Query: 190 DLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIP 249
LS N +S + L L + L L + + + LV + + + L P
Sbjct: 184 YLSKNHIS-DLRA-LAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSL--VTP 239
Query: 250 PQICNLESLEKLNVSHNNLS 269
I + EK NV +
Sbjct: 240 EIISDDGDYEKPNVKWHLPE 259
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A Length = 291 | Back alignment and structure |
|---|
Score = 67.8 bits (166), Expect = 2e-12
Identities = 23/137 (16%), Positives = 54/137 (39%), Gaps = 10/137 (7%)
Query: 156 LGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNL 215
L ++ + L+ ++ + + + + S+ + + L V L L
Sbjct: 20 DDAFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SV-QGIQYLPNVTKLFL 75
Query: 216 SNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSC 275
+ N+ P L L L L L N + ++ + +L+ L+ L++ HN +S +
Sbjct: 76 NGNKLTDIKP--LANLKNLGWLFLDENKV-KDLSS-LKDLKKLKSLSLEHNGISDING-- 129
Query: 276 FEGMHGLSCIDISYNEL 292
+ L + + N++
Sbjct: 130 LVHLPQLESLYLGNNKI 146
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 94.8 bits (236), Expect = 3e-21
Identities = 45/225 (20%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 403 NFDAEQCIGIGGQASVYRGELPSGEVVAVK--------------KFHSLLLSEISVQREF 448
++ + + G + E + A+K K ++ +S S +F
Sbjct: 32 DYRIIRTLNQGKFNKIILCE-KDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF 90
Query: 449 LNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKE-----FSW 503
NE++ +T+I++ + G ++ +++YE +E S+ + + +
Sbjct: 91 KNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPI 150
Query: 504 IVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN 563
V +IKSV N+ SY+H+ I HRD+ N+L+ ++SDFG ++++
Sbjct: 151 QVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMV--DKK 206
Query: 564 WTEFAGTFGYVAPELAYTMKVT--EKCDVYSFGVLALEVIKGKHP 606
GT+ ++ PE K D++S G+ + P
Sbjct: 207 IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 91.5 bits (228), Expect = 1e-20
Identities = 59/293 (20%), Positives = 110/293 (37%), Gaps = 72/293 (24%)
Query: 418 VYRGELPSGE------VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS 471
VY+G L VA+K +E ++ EF +E ++H N+V G +
Sbjct: 25 VYKGHLFGPAPGEQTQAVAIKTLKDK--AEGPLREEFRHEAMLRARLQHPNVVCLLGVVT 82
Query: 472 HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKS-------------VANALS 518
+ +++ G L E L + +KS +A +
Sbjct: 83 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGME 142
Query: 519 YM--HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL-------KPGSSN----WT 565
Y+ HH +VH+D++++NVL+ + ++SD G+ + + G+S W
Sbjct: 143 YLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWM 197
Query: 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHP------RDFISLLSSSSS 618
APE K + D++S+GV+ EV G P +D + ++ +
Sbjct: 198 ---------APEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQ- 247
Query: 619 NMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
LP P + + +++ + C E P RP + + L
Sbjct: 248 ------------VLPCP-DDCPAWVYALM---IECWNEFPSRRPRFKDIHSRL 284
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 92.6 bits (230), Expect = 2e-20
Identities = 48/265 (18%), Positives = 76/265 (28%), Gaps = 36/265 (13%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRS-LRNLAS 65
IP + N L L G L +EI N + I NL
Sbjct: 23 EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 80
Query: 66 LNRVHLEQ-NHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNI 124
L+ + +E+ N+L E F PNL +L IS+
Sbjct: 81 LHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGI------------------------ 116
Query: 125 TGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIEL--GNLKSLNYLVLNGNKLSGNLPRVLG 181
+P Q LD N + I G L LN N +
Sbjct: 117 -KHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFN 175
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
E N L + L++S + LE L +L +
Sbjct: 176 GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN 235
Query: 242 NFLGGEIPPQICNLESLEKLNVSHN 266
++P + L +L + ++++
Sbjct: 236 LK---KLPT-LEKLVALMEASLTYP 256
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 90.3 bits (224), Expect = 1e-19
Identities = 44/184 (23%), Positives = 73/184 (39%), Gaps = 10/184 (5%)
Query: 116 TLNFSMNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYL-VLNGNKL 172
L F + + I L K++ S N ++ I + NL L+ + + N L
Sbjct: 34 ELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNL 92
Query: 173 SGNLPRVLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQFRKEFPVE-LEK 230
P +L L+YL +S + +P+ + L+ L++ +N
Sbjct: 93 LYINPEAFQNLPNLQYLLISNTGIK-HLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVG 151
Query: 231 L-VQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNN-LSGLIPSCFEGMHGLSCIDIS 288
L + L L+ N + EI N L++LN+S NN L L F G G +DIS
Sbjct: 152 LSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDIS 210
Query: 289 YNEL 292
+
Sbjct: 211 RTRI 214
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 84.9 bits (210), Expect = 6e-18
Identities = 51/271 (18%), Positives = 85/271 (31%), Gaps = 35/271 (12%)
Query: 85 GIYPNLTFLDISHNN--------FYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEI-GKL 135
+ N L F G L + S N++ I ++ L
Sbjct: 27 DLPRNAIELRFVLTKLRVIQKGAFSG--------FGDLEKIEISQNDVLEVIEADVFSNL 78
Query: 136 YQLHKLDFS-LNQIVGEIPIE-LGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLST 193
+LH++ N ++ I E NL +L YL+++ + + LD+
Sbjct: 79 PKLHEIRIEKANNLL-YINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQD 137
Query: 194 NKLSGSIPET----LGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIP 249
N +I L L L+ N + E QL EL+LS N E+P
Sbjct: 138 NINIHTIERNSFVGLSFES--VILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELP 194
Query: 250 PQIC-NLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQ 308
+ L++S + L E + L + L P
Sbjct: 195 NDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLKKL---PTLEKLVALMEA 251
Query: 309 ALRGNRGLCGDVEGFQSCKAFVSQKHVFENK 339
+L C F + + +S+ H NK
Sbjct: 252 SLTYPSHCC----AFANWRRQISELHPICNK 278
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* Length = 350 | Back alignment and structure |
|---|
Score = 63.3 bits (154), Expect = 8e-11
Identities = 25/143 (17%), Positives = 49/143 (34%), Gaps = 7/143 (4%)
Query: 161 SLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQ 219
S + +K++ +P L L KL I + + + +S N
Sbjct: 10 SNRVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQND 65
Query: 220 FRKEFPVE-LEKLVQLSELDLSHNFLGGEIPPQIC-NLESLEKLNVSHNNLSGLIPSCFE 277
+ + L +L E+ + I P+ NL +L+ L +S+ + L
Sbjct: 66 VLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKI 125
Query: 278 GMHGLSCIDISYNELLGLIPNST 300
+DI N + I ++
Sbjct: 126 HSLQKVLLDIQDNINIHTIERNS 148
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 91.6 bits (228), Expect = 2e-20
Identities = 68/320 (21%), Positives = 118/320 (36%), Gaps = 83/320 (25%)
Query: 393 VYEEIIRATKNFDAEQCIGIG--GQASVYRGELPSGEV---VAVKKFHSLLLSEISVQRE 447
+Y + F IG G GQ V + + + A+K+ + E + + +
Sbjct: 18 IYPVLDWNDIKFQDV--IGEGNFGQ--VLKARIKKDGLRMDAAIKR-----MKEYASKDD 68
Query: 448 ---FLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSW 503
F E++ L ++ H NI+ G C H + +L E G+L + L ++
Sbjct: 69 HRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA 128
Query: 504 IVRTNVIKS-------------VANALSY---MHHDCFPPIVHRDISSKNVLLSSEYEAR 547
N S VA + Y +HRD++++N+L+ Y A+
Sbjct: 129 FAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ------FIHRDLAARNILVGENYVAK 182
Query: 548 VSDFGIAK----FLKPGSSN----WTEFAGTFGYVAPE-LAYTMKVTEKCDVYSFGVLAL 598
++DFG+++ ++K W A E L Y+ T DV+S+GVL
Sbjct: 183 IADFGLSRGQEVYVKKTMGRLPVRWM---------AIESLNYS-VYTTNSDVWSYGVLLW 232
Query: 599 EVI-KGKHP------RDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVAL 651
E++ G P + L RL P N D++ ++
Sbjct: 233 EIVSLGGTPYCGMTCAELYEKLPQGY-------------RLEKP-LNCDDEVYDLM---R 275
Query: 652 LCLEESPESRPTMQTVCQLL 671
C E P RP+ + L
Sbjct: 276 QCWREKPYERPSFAQILVSL 295
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 90.9 bits (226), Expect = 5e-20
Identities = 59/288 (20%), Positives = 108/288 (37%), Gaps = 57/288 (19%)
Query: 402 KNFDAEQCIGIGGQASVYRGE-LPSGEVVAVK-----KFHSLLLSEISVQREFLNEIKAL 455
+ + +G G V+ + V VK K E + EI L
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAIL 83
Query: 456 TEIRHRNIVKFYGFCSHPRHSFLVYECLERGS-LAEILSNDGSIKE------FSWIVRTN 508
+ + H NI+K + LV E G L + + E F +V
Sbjct: 84 SRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLV--- 140
Query: 509 VIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA 568
+A+ Y+ I+HRDI +N++++ ++ ++ DFG A +L+ G +T F
Sbjct: 141 ------SAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT-FC 190
Query: 569 GTFGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSL 624
GT Y APE+ Y + +++S GV ++ ++P L
Sbjct: 191 GTIEYCAPEVLMGNPYRGP---ELEMWSLGVTLYTLVFEENPFC--------------EL 233
Query: 625 NEILDPRLPLP---SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
E ++ + P S+ + + +L+ PE R T++ +
Sbjct: 234 EETVEAAIHPPYLVSKELMSLVSGLLQP-------VPERRTTLEKLVT 274
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 2e-19
Identities = 60/297 (20%), Positives = 112/297 (37%), Gaps = 77/297 (25%)
Query: 418 VYRGELPSGE--------VVAVKKFHSLLLSEISVQRE---FLNEIKALTEI-RHRNIVK 465
V E + VAVK L + + +++ ++E++ + I +H+NI+
Sbjct: 51 VVMAEAVGIDKDKPKEAVTVAVKM-----LKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 105
Query: 466 FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKS------------- 512
G C+ +++ E +G+L E L V +
Sbjct: 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 165
Query: 513 VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL------KPGSSN--- 563
+A + Y+ +HRD++++NVL++ +++DFG+A+ + K ++
Sbjct: 166 LARGMEYLASQKC---IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 564 --WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHP------RDFISLLS 614
W APE + T + DV+SFGVL E+ G P + LL
Sbjct: 223 VKWM---------APEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK 273
Query: 615 SSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
R+ P N ++L ++ C P RPT + + + L
Sbjct: 274 EGH-------------RMDKP-ANCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 313
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 88.8 bits (221), Expect = 2e-19
Identities = 58/300 (19%), Positives = 106/300 (35%), Gaps = 78/300 (26%)
Query: 418 VYRGEL------PSGEVVAVKKFHSLLLSEISVQRE---FLNEIKALTEI-RHRNIVKFY 467
V + VAVK L + E ++E+K L+ + H NIV
Sbjct: 39 VVEATAYGLIKSDAAMTVAVKM-----LKPSAHLTEREALMSELKVLSYLGNHMNIVNLL 93
Query: 468 GFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKS--------------- 512
G C+ + ++ E G L L S +
Sbjct: 94 GACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQ 153
Query: 513 VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-------FLKPGSSN-- 563
VA ++++ +HRD++++N+LL+ ++ DFG+A+ ++ G++
Sbjct: 154 VAKGMAFLASKNC---IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 564 --WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHP-------RDFISLL 613
W APE + T + DV+S+G+ E+ G P F ++
Sbjct: 211 VKWM---------APESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI 261
Query: 614 SSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673
R+ P + ++ I+ C + P RPT + + QL+ K
Sbjct: 262 KEGF-------------RMLSP-EHAPAEMYDIM---KTCWDADPLKRPTFKQIVQLIEK 304
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 88.1 bits (219), Expect = 3e-19
Identities = 64/291 (21%), Positives = 102/291 (35%), Gaps = 61/291 (20%)
Query: 402 KNFDAEQCIGIGGQASVYRGE-LPSGEVVAVK-------KFHSLLLSEISVQREFLNEIK 453
+ +G GG +V+ G L VA+K S L ++ E K
Sbjct: 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWK 90
Query: 454 ALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGS-LAEILSNDGSIKE------FSWIVR 506
H +++ + LV E L + ++ G + E F +V
Sbjct: 91 VGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVV- 149
Query: 507 TNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-EARVSDFGIAKFLKPGSSNWT 565
A+ + H +VHRDI +N+L+ A++ DFG L +T
Sbjct: 150 --------AAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE--PYT 196
Query: 566 EFAGTFGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN 621
+F GT Y PE Y V+S G+L +++ G P +
Sbjct: 197 DFDGTRVYSPPEWISRHQYHAL---PATVWSLGILLYDMVCGDIPFE------------- 240
Query: 622 LSLNEILDPRLPLP---SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
EIL+ L P S + LI CL P SRP+++ +
Sbjct: 241 -RDQEILEAELHFPAHVSPDCCA-LIR------RCLAPKPSSRPSLEEILL 283
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 3e-19
Identities = 62/294 (21%), Positives = 109/294 (37%), Gaps = 74/294 (25%)
Query: 418 VYRGEL------PSGEVVAVKKFHSLLLSEISVQRE---FLNEIKALTEI-RHRNIVKFY 467
V + VAVK L + E ++E+K ++ + +H NIV
Sbjct: 62 VVEATAFGLGKEDAVLKVAVKM-----LKSTAHADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 468 GFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKS-----------VANA 516
G C+H ++ E G L L + E + VA
Sbjct: 117 GACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQG 176
Query: 517 LSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-------FLKPGSSN----WT 565
++++ +HRD++++NVLL++ + A++ DFG+A+ ++ G++ W
Sbjct: 177 MAFLASKNC---IHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 233
Query: 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHP-------RDFISLLSSSS 617
APE + T + DV+S+G+L E+ G +P F L+
Sbjct: 234 ---------APESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY 284
Query: 618 SNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
++ P + SI+ C P RPT Q +C L
Sbjct: 285 -------------QMAQP-AFAPKNIYSIM---QACWALEPTHRPTFQQICSFL 321
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 88.6 bits (220), Expect = 5e-19
Identities = 60/297 (20%), Positives = 111/297 (37%), Gaps = 77/297 (25%)
Query: 418 VYRGELP--------SGEVVAVKKFHSLLLSEISVQRE---FLNEIKALTEI-RHRNIVK 465
V E VAVK L + +++ ++E++ + I +H+NI+
Sbjct: 85 VVLAEAIGLDKDKPNRVTKVAVKM-----LKSDATEKDLSDLISEMEMMKMIGKHKNIIN 139
Query: 466 FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKS------------- 512
G C+ +++ E +G+L E L ++ +
Sbjct: 140 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQ 199
Query: 513 VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL-------KPGSSN-- 563
VA + Y+ +HRD++++NVL++ + +++DFG+A+ + K +
Sbjct: 200 VARGMEYLASKKC---IHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP 256
Query: 564 --WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHP------RDFISLLS 614
W APE + T + DV+SFGVL E+ G P + LL
Sbjct: 257 VKWM---------APEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLK 307
Query: 615 SSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
R+ P N ++L ++ C P RPT + + + L
Sbjct: 308 EGH-------------RMDKP-SNCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 347
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 88.4 bits (219), Expect = 5e-19
Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 12/169 (7%)
Query: 127 SIPPEIGKLYQLHKLDFSLNQIVGEIPIE--LGNLKSLNYLVLNGNKLSGNLPRVLGSLS 184
++P + LD S N + + E L +L+ L+L+ N L+ +
Sbjct: 32 NVPQSLPS--YTALLDLSHNNL-SRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVP 88
Query: 185 ELEYLDLSTNKLSGSIP-ETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNF 243
L YLDLS+N L ++ +L + L L NN E + QL +L LS N
Sbjct: 89 NLRYLDLSSNHLH-TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQ 147
Query: 244 LGGEIPPQI----CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDIS 288
+ P ++ L L L++S N L L + + + +
Sbjct: 148 IS-RFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLY 195
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 86.4 bits (214), Expect = 2e-18
Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 15/162 (9%)
Query: 116 TLNFSMNNITGSIPPEI--GKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYLVLNGNKL 172
L+ S NN++ + E +L LH L S N + I E + +L YL L+ N L
Sbjct: 43 LLDLSHNNLS-RLRAEWTPTRLTNLHSLLLSHNHL-NFISSEAFVPVPNLRYLDLSSNHL 100
Query: 173 SGNLPR-VLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQFRKEFPVE--- 227
L + L LE L L N + + ++ ++ L LS NQ FPVE
Sbjct: 101 H-TLDEFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIK 157
Query: 228 -LEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVS-HNN 267
KL +L LDLS N L + L + K + HNN
Sbjct: 158 DGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNN 199
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 77.2 bits (190), Expect = 2e-15
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 14/168 (8%)
Query: 85 GIYPNLTFLDISHNNFYGEIWSSWGKC--QQLGTLNFSMNNITGSIPPEI-GKLYQLHKL 141
+ LD+SHNN + + W L +L S N++ I E + L L
Sbjct: 36 SLPSYTALLDLSHNNL-SRLRAEWTPTRLTNLHSLLLSHNHLN-FISSEAFVPVPNLRYL 93
Query: 142 DFSLNQIVGEIPIE-LGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSI 200
D S N + + +L++L L+L N + +++L+ L LS N++S
Sbjct: 94 DLSSNHLH-TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RF 151
Query: 201 PE----TLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSE--LDLSHN 242
P L K+ L+LS+N+ +K +L+KL + L L +N
Sbjct: 152 PVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNN 199
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 71.0 bits (174), Expect = 2e-13
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 184 SELEYLDLSTNKLSGSIPET-LGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHN 242
S LDLS N LS E L +H L LS+N + L LDLS N
Sbjct: 39 SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98
Query: 243 FLGGEIPPQIC-NLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
L + + +L++LE L + +N++ + + FE M L + +S N++
Sbjct: 99 HLH-TLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQI 148
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 59.5 bits (144), Expect = 1e-09
Identities = 36/153 (23%), Positives = 56/153 (36%), Gaps = 10/153 (6%)
Query: 1 MNHLSGAIPPSV--GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPR 58
N+LS + TNL L L N L+ + L L++ +N L +
Sbjct: 48 HNNLS-RLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHL-HTLDE 105
Query: 59 -SLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNN---FYGEIWSSWGKCQQL 114
+L +L + L NH+ F L L +S N F E+ K +L
Sbjct: 106 FLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKL 165
Query: 115 GTLNFSMNNITGSIPPE-IGKLYQLHKLDFSLN 146
L+ S N + +P + KL K L+
Sbjct: 166 MLLDLSSNKLK-KLPLTDLQKLPAWVKNGLYLH 197
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} Length = 361 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 5e-07
Identities = 24/105 (22%), Positives = 38/105 (36%), Gaps = 10/105 (9%)
Query: 2 NHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEI-GNLMQLTNLEIDNNQLFGQIP-- 57
NHL + + + L+ L LY+N + V ++ QL L + NQ+ + P
Sbjct: 98 NHLH-TLDEFLFSDLQALEVLLLYNNHIV-VVDRNAFEDMAQLQKLYLSQNQIS-RFPVE 154
Query: 58 --RSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDIS-HNN 99
+ L L + L N L P + HNN
Sbjct: 155 LIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNN 199
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 88.2 bits (219), Expect = 5e-19
Identities = 60/299 (20%), Positives = 110/299 (36%), Gaps = 81/299 (27%)
Query: 418 VYRGEL--------PSGEVVAVKKFHSLLLSEISVQRE---FLNEIKALTEI-RHRNIVK 465
V E VAVK L + + +++ ++E++ + I +H+NI+
Sbjct: 97 VVMAEAVGIDKDKPKEAVTVAVKM-----LKDDATEKDLSDLVSEMEMMKMIGKHKNIIN 151
Query: 466 FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKS------------- 512
G C+ +++ E +G+L E L V +
Sbjct: 152 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQ 211
Query: 513 VANALSYM--HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL-------KPGSS- 562
+A + Y+ +HRD++++NVL++ +++DFG+A+ + K +
Sbjct: 212 LARGMEYLASQK-----CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 266
Query: 563 ---NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHP------RDFISL 612
W APE + T + DV+SFGVL E+ G P + L
Sbjct: 267 LPVKWM---------APEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 317
Query: 613 LSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
L R+ P N ++L ++ C P RPT + + + L
Sbjct: 318 LKEGH-------------RMDKP-ANCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 359
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 6e-19
Identities = 63/297 (21%), Positives = 110/297 (37%), Gaps = 77/297 (25%)
Query: 418 VYRGEL------PSGEVVAVKKFHSLLLSEISVQRE---FLNEIKALTEI-RHRNIVKFY 467
V + + VAVK L E + E ++E+K L I H N+V
Sbjct: 43 VIEADAFGIDKTATCRTVAVKM-----LKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97
Query: 468 GFCSHP-RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKS-------------V 513
G C+ P ++ E + G+L+ L + + + ++ K V
Sbjct: 98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQV 157
Query: 514 ANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL-------KPGSSN--- 563
A + ++ +HRD++++N+LLS + ++ DFG+A+ + + G +
Sbjct: 158 AKGMEFLASRKC---IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 214
Query: 564 -WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHP-------RDFISLLS 614
W APE + T + DV+SFGVL E+ G P +F L
Sbjct: 215 KWM---------APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 265
Query: 615 SSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ R+ P ++ + L C P RPT + + L
Sbjct: 266 EGT-------------RMRAP-DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 305
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 87.8 bits (218), Expect = 7e-19
Identities = 59/302 (19%), Positives = 113/302 (37%), Gaps = 82/302 (27%)
Query: 418 VYRGELPSGE------VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS 471
V++ P +VAVK + +Q +F E + E + NIVK G C+
Sbjct: 63 VFQARAPGLLPYEPFTMVAVKMLKEE--ASADMQADFQREAALMAEFDNPNIVKLLGVCA 120
Query: 472 HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKS------------------- 512
+ L++E + G L E L + S ++
Sbjct: 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIA 180
Query: 513 --VANALSYM--HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL------KPGSS 562
VA ++Y+ VHRD++++N L+ +++DFG+++ + K +
Sbjct: 181 RQVAAGMAYLSERK-----FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGN 235
Query: 563 N-----WTEFAGTFGYVAPE-LAYTMKVTEKCDVYSFGVLALEVI-KGKHP------RDF 609
+ W PE + Y + T + DV+++GV+ E+ G P +
Sbjct: 236 DAIPIRWM---------PPESIFYN-RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV 285
Query: 610 ISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
I + + L P N +L +++ LC + P RP+ ++ +
Sbjct: 286 IYYVRDGN-------------ILACP-ENCPLELYNLM---RLCWSKLPADRPSFCSIHR 328
Query: 670 LL 671
+L
Sbjct: 329 IL 330
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 89.4 bits (221), Expect = 8e-19
Identities = 43/235 (18%), Positives = 85/235 (36%), Gaps = 27/235 (11%)
Query: 9 PPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNR 68
L L + + E+ + +L LE +N I +R L L
Sbjct: 342 CRDSATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLY 400
Query: 69 VHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLG--------TLNFS 120
+ + L +D + ++ S + + L+ +
Sbjct: 401 EKETLQYFS-----------TLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLA 449
Query: 121 MNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVL 180
++T + + +L + LD S N++ +P L L+ L L + N L N+ +
Sbjct: 450 HKDLT--VLCHLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GV 504
Query: 181 GSLSELEYLDLSTNKLSG-SIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQL 234
+L L+ L L N+L + + L + ++ LNL N +E E+L ++
Sbjct: 505 ANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE-EGIQERLAEM 558
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 77.5 bits (190), Expect = 5e-15
Identities = 45/303 (14%), Positives = 84/303 (27%), Gaps = 30/303 (9%)
Query: 11 SVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVH 70
S + + L + + ++ G +L + +
Sbjct: 227 SAWFY--HRWLLGRAEPHDVLCCVHVSREEACLSVCFSRPLTVGSRMGTLLLMVDEAPLS 284
Query: 71 LEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPP 130
+E G +L ++ W +
Sbjct: 285 VEWRTPDGRNRPSHVWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPE-CWCR 343
Query: 131 EIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLD 190
+ QL + + S+ + + EL + K L L + ++ +L L Y
Sbjct: 344 DSATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEK 402
Query: 191 LSTNKLSG---------------------SIPETLGNLLKVHYLNLSNNQFRKEFPVELE 229
+ S V L+L++ LE
Sbjct: 403 ETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLTV--LCHLE 460
Query: 230 KLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISY 289
+L+ ++ LDLSHN L +PP + L LE L S N L + + L + +
Sbjct: 461 QLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV--DGVANLPRLQELLLCN 517
Query: 290 NEL 292
N L
Sbjct: 518 NRL 520
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 77.1 bits (189), Expect = 6e-15
Identities = 41/226 (18%), Positives = 71/226 (31%), Gaps = 14/226 (6%)
Query: 70 HLEQNHLTGNISEVFGIYPNLTFLDISHN--NFYGEIWSSWGKCQQLGTLNFSMNNITGS 127
+ L ++S S + Q+L N
Sbjct: 331 CVLLKDRPECWCRDSATDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIIL 390
Query: 128 IPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELE 187
+ + L + + + P+ L L L N + ++
Sbjct: 391 LMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYA------DVR 444
Query: 188 YLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGE 247
L L+ L+ + L LL V +L+LS+N+ R P L L L L S N L
Sbjct: 445 VLHLAHKDLT-VLCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-N 500
Query: 248 IPPQICNLESLEKLNVSHNNLSGL-IPSCFEGMHGLSCIDISYNEL 292
+ + NL L++L + +N L L +++ N L
Sbjct: 501 VDG-VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 545
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 64.4 bits (156), Expect = 7e-11
Identities = 31/182 (17%), Positives = 59/182 (32%), Gaps = 17/182 (9%)
Query: 21 LYLYSNSLSGSVPGEIGNLMQLTNLEIDN--------NQLFGQIPRSLRNLASLNRVHLE 72
L + + + L ++ ++ + A + +HL
Sbjct: 390 LLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLA 449
Query: 73 QNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEI 132
LT + +T LD+SHN + + + L L S N + ++ +
Sbjct: 450 HKDLT-VLCH-LEQLLLVTHLDLSHNRL-RALPPALAALRCLEVLQASDNALE-NVDG-V 504
Query: 133 GKLYQLHKLDFSLNQIVG-EIPIELGNLKSLNYLVLNGNKLS---GNLPRVLGSLSELEY 188
L +L +L N++ L + L L L GN L G R+ L +
Sbjct: 505 ANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSS 564
Query: 189 LD 190
+
Sbjct: 565 IL 566
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* Length = 567 | Back alignment and structure |
|---|
Score = 54.4 bits (130), Expect = 9e-08
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIP--RS 59
N L A+PP++ L+ L N+L +V G + NL +L L + NN+L Q +
Sbjct: 473 NRLR-ALPPALAALRCLEVLQASDNALE-NVDG-VANLPRLQELLLCNNRL-QQSAAIQP 528
Query: 60 LRNLASLNRVHLEQNHLT---GNISEVFGIYPNLTFLD 94
L + L ++L+ N L G + + P+++ +
Sbjct: 529 LVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 86.5 bits (215), Expect = 1e-18
Identities = 61/304 (20%), Positives = 111/304 (36%), Gaps = 86/304 (28%)
Query: 418 VYRGELPSGE------VVAVKKFHSLLLSEISVQRE---FLNEIKALTEIRHRNIVKFYG 468
V + + VAVK L E + E L+E L ++ H +++K YG
Sbjct: 39 VVKATAFHLKGRAGYTTVAVKM-----LKENASPSELRDLLSEFNVLKQVNHPHVIKLYG 93
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKS---------------- 512
CS L+ E + GSL L + + S
Sbjct: 94 ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLI 153
Query: 513 -----VANALSYM--HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL------KP 559
++ + Y+ +VHRD++++N+L++ + ++SDFG+++ +
Sbjct: 154 SFAWQISQGMQYLAEMK-----LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVK 208
Query: 560 GSSN-----WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-------KGKHPR 607
S W A E + T + DV+SFGVL E++ G P
Sbjct: 209 RSQGRIPVKWM---------AIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE 259
Query: 608 DFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTV 667
+LL + R+ P N +++ ++ L C ++ P+ RP +
Sbjct: 260 RLFNLLKTGH-------------RMERP-DNCSEEMYRLM---LQCWKQEPDKRPVFADI 302
Query: 668 CQLL 671
+ L
Sbjct: 303 SKDL 306
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 86.2 bits (214), Expect = 1e-18
Identities = 61/293 (20%), Positives = 106/293 (36%), Gaps = 67/293 (22%)
Query: 402 KNFDAEQCIGIGGQASVYRGE-LPSGEVVAVK-------KFHSLLLSEISVQREFLNEIK 453
+ +G GG SVY G + VA+K L + V E +
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME----VV 98
Query: 454 ALTEIRHR--NIVKFYGFCSHPRHSFLVYE-CLERGSLAEILSNDGSIKE------FSWI 504
L ++ +++ + P L+ E L + ++ G+++E F +
Sbjct: 99 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 158
Query: 505 VRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-EARVSDFGIAKFLKPGSSN 563
+ A+ + H+ ++HRDI +N+L+ E ++ DFG LK
Sbjct: 159 L---------EAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--V 204
Query: 564 WTEFAGTFGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN 619
+T+F GT Y PE Y + V+S G+L +++ G P +
Sbjct: 205 YTDFDGTRVYSPPEWIRYHRYHGR---SAAVWSLGILLYDMVCGDIPFE----------- 250
Query: 620 MNLSLNEILDPRLPLP---SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
EI+ ++ S Q LI CL P RPT + +
Sbjct: 251 ---HDEEIIRGQVFFRQRVSSECQH-LIR------WCLALRPSDRPTFEEIQN 293
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 2e-18
Identities = 56/293 (19%), Positives = 97/293 (33%), Gaps = 43/293 (14%)
Query: 42 LTNLEIDNNQL-FGQIPRSLRNLASLNRVHLEQNHLT----GNISEVFGIYPNLTFLDIS 96
+ +L+I +L + L L V L+ LT +IS + P L L++
Sbjct: 5 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 64
Query: 97 HNNFYGEIWSSWGKC-----QQLGTLNFSMNNIT----GSIPPEIGKLYQLHKLDFSLNQ 147
N + ++ L+ +T G + + L L +L S N
Sbjct: 65 SNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNL 124
Query: 148 IVGEIPIE------LGNLKSLNYLVLNGNKLS----GNLPRVLGSLSELEYLDLSTNKLS 197
+ G+ ++ L L L L LS L VL + + + L +S N ++
Sbjct: 125 L-GDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDIN 183
Query: 198 GSIPETLGNLLKVH-----YLNLSNNQFR----KEFPVELEKLVQLSELDLSHNFLGGE- 247
+ L LK L L + ++ + L EL L N LG
Sbjct: 184 EAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVG 243
Query: 248 ----IPPQICNLESLEKLNVSHNNLS----GLIPSCFEGMHGLSCIDISYNEL 292
P + L L + ++ G + L + ++ NEL
Sbjct: 244 MAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNEL 296
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 5e-15
Identities = 59/327 (18%), Positives = 104/327 (31%), Gaps = 49/327 (14%)
Query: 15 FTNLKGLYLYSNSLSGSVPGEIGNLMQ----LTNLEIDNNQL----FGQIPRSLRNL-AS 65
+ + L L+ + +I + ++ L L + +N+L + + L+
Sbjct: 27 LQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCK 86
Query: 66 LNRVHLEQNHLT----GNISEVFGIYPNLTFLDISHNNFYGEIWSSWGK-----CQQLGT 116
+ ++ L+ LT G +S P L L +S N + +L
Sbjct: 87 IQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEK 146
Query: 117 LNFSMNNIT----GSIPPEIGKLYQLHKLDFSLNQIVGEIPIELG-----NLKSLNYLVL 167
L +++ + + +L S N I L + L L L
Sbjct: 147 LQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKL 206
Query: 168 NGNKLS----GNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLK-----VHYLNLSNN 218
++ +L ++ S + L L L +NKL L L + L +
Sbjct: 207 ESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWEC 266
Query: 219 QFRKEFPVE----LEKLVQLSELDLSHNFLGGEIPPQICNL-----ESLEKLNVSHNNLS 269
+ + L L EL L+ N LG E +C LE L V + +
Sbjct: 267 GITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFT 326
Query: 270 GL----IPSCFEGMHGLSCIDISYNEL 292
S L + IS N L
Sbjct: 327 AACCSHFSSVLAQNRFLLELQISNNRL 353
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 76.2 bits (188), Expect = 1e-14
Identities = 56/301 (18%), Positives = 96/301 (31%), Gaps = 45/301 (14%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQ----LTNLEIDNNQL----FGQIPRSLR-NLA 64
L+ L L SLS + + ++++ L + NN + + + L+ +
Sbjct: 140 PQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPC 199
Query: 65 SLNRVHLEQNHLT----GNISEVFGIYPNLTFLDISHNNFYGE----IWSSWGKCQ-QLG 115
L + LE +T ++ + +L L + N + +L
Sbjct: 200 QLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLR 259
Query: 116 TLNFSMNNIT----GSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNL-----KSLNYLV 166
TL IT G + + L +L + N++ E L L L
Sbjct: 260 TLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLW 319
Query: 167 LNGNKLSG----NLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKV-----HYLNLSN 217
+ + + VL L L +S N+L + L L L L++
Sbjct: 320 VKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLAD 379
Query: 218 NQFRKEFPVE----LEKLVQLSELDLSHNFLGGEIPPQIC-----NLESLEKLNVSHNNL 268
L L ELDLS+N LG Q+ LE+L +
Sbjct: 380 CDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYW 439
Query: 269 S 269
S
Sbjct: 440 S 440
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 9e-13
Identities = 41/236 (17%), Positives = 75/236 (31%), Gaps = 32/236 (13%)
Query: 89 NLTFLDISHNNFYGEIWSSWGKC-QQLGTLNFSMNNIT----GSIPPEIGKLYQLHKLDF 143
++ LDI W+ QQ + +T I + L +L+
Sbjct: 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 63
Query: 144 SLNQIVGEIPIELGN-LKS----LNYLVLNGNKLS----GNLPRVLGSLSELEYLDLSTN 194
N++ + L++ + L L L+ G L L +L L+ L LS N
Sbjct: 64 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDN 123
Query: 195 KLSGSIPETLGNLL-----KVHYLNLSNNQFR----KEFPVELEKLVQLSELDLSHNFLG 245
L + + L L ++ L L + L EL +S+N +
Sbjct: 124 LLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDIN 183
Query: 246 GEIPPQIC-----NLESLEKLNVSHNNLS----GLIPSCFEGMHGLSCIDISYNEL 292
+C + LE L + ++ + L + + N+L
Sbjct: 184 EAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKL 239
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 1e-08
Identities = 47/256 (18%), Positives = 88/256 (34%), Gaps = 36/256 (14%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIG----NLMQLTNLEIDNNQLFGQ-----IPRSLRNLA 64
+ L+ L L S ++ ++ + L L + +N+L P L +
Sbjct: 197 SPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSS 256
Query: 65 SLNRVHLEQNHLT----GNISEVFGIYPNLTFLDISHNNFYGE----IWSSWGKCQ-QLG 115
L + + + +T G++ V +L L ++ N E + + + QL
Sbjct: 257 RLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLE 316
Query: 116 TLNFSMNNITGSIPPEIGKLYQ----LHKLDFSLNQIVGEIPIELG-----NLKSLNYLV 166
+L + T + + L +L S N++ EL L L
Sbjct: 317 SLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLW 376
Query: 167 LNGNKLS----GNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKV-----HYLNLSN 217
L +S +L L + L LDLS N L + L ++ L L +
Sbjct: 377 LADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYD 436
Query: 218 NQFRKEFPVELEKLVQ 233
+ +E L+ L +
Sbjct: 437 IYWSEEMEDRLQALEK 452
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I Length = 461 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 4e-07
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 14/123 (11%)
Query: 184 SELEYLDLSTNKLS-GSIPETLGNLLKVHYLNLSNNQFR----KEFPVELEKLVQLSELD 238
+++ LD+ +LS E L L + + L + K+ L L+EL+
Sbjct: 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 62
Query: 239 LSHNFLGGEIPPQICN-LES----LEKLNVSHNNLS----GLIPSCFEGMHGLSCIDISY 289
L N LG + L++ ++KL++ + L+ G++ S + L + +S
Sbjct: 63 LRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSD 122
Query: 290 NEL 292
N L
Sbjct: 123 NLL 125
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 85.8 bits (213), Expect = 2e-18
Identities = 60/307 (19%), Positives = 107/307 (34%), Gaps = 87/307 (28%)
Query: 418 VYRGEL------PSGEVVAVKKFHSLLLSEISVQRE---FLNEIKALTEI-RHRNIVKFY 467
V VAVK L E + E ++E+K +T++ H NIV
Sbjct: 61 VMNATAYGISKTGVSIQVAVKM-----LKEKADSSEREALMSELKMMTQLGSHENIVNLL 115
Query: 468 GFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKS--------------- 512
G C+ +L++E G L L + I N +
Sbjct: 116 GACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLL 175
Query: 513 -----VANALSYM--HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-------FLK 558
VA + ++ VHRD++++NVL++ ++ DFG+A+ ++
Sbjct: 176 CFAYQVAKGMEFLEFKS-----CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVV 230
Query: 559 PGSS----NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHP------- 606
G++ W APE + T K DV+S+G+L E+ G +P
Sbjct: 231 RGNARLPVKWM---------APESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 281
Query: 607 RDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQT 666
+F L+ + ++ P +++ I+ C RP+
Sbjct: 282 ANFYKLIQNGF-------------KMDQP-FYATEEIYIIM---QSCWAFDSRKRPSFPN 324
Query: 667 VCQLLCK 673
+ L
Sbjct: 325 LTSFLGC 331
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 3e-18
Identities = 54/259 (20%), Positives = 93/259 (35%), Gaps = 43/259 (16%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQ 73
N L S++ V L + N DN+ + +SL +
Sbjct: 17 GLANAVKQNLGKQSVTDLVS--QKELSGVQNFNGDNSNI-----QSLAGMQFF------- 62
Query: 74 NHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIG 133
NL L +SHN S +L L+ + N + ++
Sbjct: 63 --------------TNLKELHLSHNQI--SDLSPLKDLTKLEELSVNRNRLK-NLNG--I 103
Query: 134 KLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLST 193
L +L N++ + +LK+L L + NKL ++ +LG LS+LE LDL
Sbjct: 104 PSACLSRLFLDNNELRDTDSLI--HLKNLEILSIRNNKLK-SIV-MLGFLSKLEVLDLHG 159
Query: 194 NKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPP-QI 252
N+++ + L L KV++++L+ + E +L + + + G I P I
Sbjct: 160 NEIT-NT-GGLTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTV---KDPDGRWISPYYI 214
Query: 253 CNLESLEKLNVSHNNLSGL 271
N S V
Sbjct: 215 SNGGSYVDGCVLWELPVYT 233
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 5e-18
Identities = 44/214 (20%), Positives = 83/214 (38%), Gaps = 18/214 (8%)
Query: 60 LRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNF 119
LA+ + +L + +T ++ + + ++N + + L L+
Sbjct: 15 DPGLANAVKQNLGKQSVT-DLVS-QKELSGVQNFNGDNSNI--QSLAGMQFFTNLKELHL 70
Query: 120 SMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRV 179
S N I+ + P + L +L +L + N++ + L+ L L+ N+L
Sbjct: 71 SHNQIS-DLSP-LKDLTKLEELSVNRNRLKN---LNGIPSACLSRLFLDNNELRDTDS-- 123
Query: 180 LGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDL 239
L L LE L + NKL SI LG L K+ L+L N+ L +L +++ +DL
Sbjct: 124 LIHLKNLEILSIRNNKLK-SI-VMLGFLSKLEVLDLHGNEITNTGG--LTRLKKVNWIDL 179
Query: 240 SHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIP 273
+ + + L N + I
Sbjct: 180 TGQKC---VNEPVKYQPELYITNTVKDPDGRWIS 210
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 80.5 bits (199), Expect = 5e-17
Identities = 37/198 (18%), Positives = 75/198 (37%), Gaps = 16/198 (8%)
Query: 95 ISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPI 154
I ++ N ++T + +L + + + I +
Sbjct: 3 IQRPTPINQV-FPDPGLANAVKQNLGKQSVT-DLVS-QKELSGVQNFNGDNSNIQ-SLA- 57
Query: 155 ELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLN 214
+ +L L L+ N++S +L L L++LE L ++ N+L ++ + L
Sbjct: 58 GMQFFTNLKELHLSHNQIS-DLS-PLKDLTKLEELSVNRNRLK-NLNG--IPSACLSRLF 112
Query: 215 LSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPS 274
L NN+ R L L L L + +N L I + L LE L++ N ++
Sbjct: 113 LDNNELRDTDS--LIHLKNLEILSIRNNKLK-SIVM-LGFLSKLEVLDLHGNEITNTGG- 167
Query: 275 CFEGMHGLSCIDISYNEL 292
+ ++ ID++ +
Sbjct: 168 -LTRLKKVNWIDLTGQKC 184
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 3e-11
Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 18/166 (10%)
Query: 12 VGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHL 71
+ FTNLK L+L N +S + + +L +L L ++ N+L ++L + S L
Sbjct: 59 MQFFTNLKELHLSHNQIS-DLSP-LKDLTKLEELSVNRNRL-----KNLNGIPSAC---L 108
Query: 72 EQNHLTGN-ISEVFGIY--PNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSI 128
+ L N + + + NL L I +N + G +L L+ N IT +
Sbjct: 109 SRLFLDNNELRDTDSLIHLKNLEILSIRNNKL--KSIVMLGFLSKLEVLDLHGNEIT-NT 165
Query: 129 PPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYL-VLNGNKLS 173
+ +L +++ +D + + V E L N + +G +S
Sbjct: 166 GG-LTRLKKVNWIDLTGQKCVNEPVKYQPELYITNTVKDPDGRWIS 210
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} Length = 263 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 1e-07
Identities = 30/175 (17%), Positives = 60/175 (34%), Gaps = 20/175 (11%)
Query: 12 VGNFTNLKGLYLYSNSLSGSVPGEIGNL--MQLTNLEIDNNQLFGQIPRSLRNLASLNRV 69
+ + T L+ L + N L + + L+ L +DNN+L + SL +L +L +
Sbjct: 81 LKDLTKLEELSVNRNRLK-----NLNGIPSACLSRLFLDNNEL--RDTDSLIHLKNLEIL 133
Query: 70 HLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIP 129
+ N L +I G L LD+ N + +++ ++ +
Sbjct: 134 SIRNNKLK-SIVM-LGFLSKLEVLDLHGNEI--TNTGGLTRLKKVNWIDLTGQKCVNEPV 189
Query: 130 PEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLS 184
+LY + + + + I N + LP +S
Sbjct: 190 KYQPELYITNTVKDPDGRWISPYYIS-------NGGSYVDGCVLWELPVYTDEVS 237
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 3e-18
Identities = 44/254 (17%), Positives = 79/254 (31%), Gaps = 46/254 (18%)
Query: 41 QLTNLEIDNNQL--FGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHN 98
Q + + + +P S + L L + HL S F PN++ + +S +
Sbjct: 12 QEEDFRVTCKDIQRIPSLPPSTQTL------KLIETHLRTIPSHAFSNLPNISRIYVSID 65
Query: 99 NFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIE-L 156
+ + L ++ ++ + + I + L
Sbjct: 66 V-----------------------TLQ-QLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101
Query: 157 GNLKSLNYLVLNGNKLSGNLP--RVLGSLSELEYLDLSTNKLSGSIPET----LGNLLKV 210
L L +L + L P + S L+++ N SIP L N
Sbjct: 102 KELPLLKFLGIFNTGLK-MFPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNET-- 158
Query: 211 HYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQI-CNLES-LEKLNVSHNNL 268
L L NN F +L + L+ N I + S L+VS ++
Sbjct: 159 LTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSV 217
Query: 269 SGLIPSCFEGMHGL 282
+ L E + L
Sbjct: 218 TALPSKGLEHLKEL 231
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 76.6 bits (189), Expect = 8e-16
Identities = 38/211 (18%), Positives = 69/211 (32%), Gaps = 12/211 (5%)
Query: 16 TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPR-SLRNLASLNRVHLEQN 74
+ + L L L NL ++ + + + Q+ S NL+ + + +
Sbjct: 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNT 90
Query: 75 HLTGNIS-EVFGIYPNLTFLDISHNNFYGEI--WSSWGKCQQLGTLNFSMNNITGSIPPE 131
I + P L FL I + + L + N SIP
Sbjct: 91 RNLTYIDPDALKELPLLKFLGIFNTGL-KMFPDLTKVYSTDIFFILEITDNPYMTSIPVN 149
Query: 132 I--GKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVL--GSLSELE 187
G + L N + N L+ + LN NK + + G S
Sbjct: 150 AFQGLCNETLTLKLYNNGF-TSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPS 208
Query: 188 YLDLSTNKLSGSIP-ETLGNLLKVHYLNLSN 217
LD+S ++ ++P + L +L ++ N
Sbjct: 209 LLDVSQTSVT-ALPSKGLEHLKELIARNTWT 238
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 1e-11
Identities = 24/138 (17%), Positives = 50/138 (36%), Gaps = 7/138 (5%)
Query: 161 SLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQ 219
S L L L +L + + +S + + + NL KV ++ + N +
Sbjct: 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTR 91
Query: 220 FRKEFPVE-LEKLVQLSELDLSHNFLGGEIPPQ--ICNLESLEKLNVSHNNLSGLIPS-C 275
+ L++L L L + + L P + + + L ++ N IP
Sbjct: 92 NLTYIDPDALKELPLLKFLGIFNTGL-KMFPDLTKVYSTDIFFILEITDNPYMTSIPVNA 150
Query: 276 FEGMHGLSC-IDISYNEL 292
F+G+ + + + N
Sbjct: 151 FQGLCNETLTLKLYNNGF 168
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* Length = 239 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 3e-08
Identities = 20/130 (15%), Positives = 47/130 (36%), Gaps = 5/130 (3%)
Query: 175 NLPRVLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQFRKEFPVEL-EKLV 232
++ R+ + L L L +IP NL + + +S + ++ L
Sbjct: 22 DIQRIPSLPPSTQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLS 80
Query: 233 QLSELDLSHNFLGGEIPPQIC-NLESLEKLNVSHNNLSGLIP-SCFEGMHGLSCIDISYN 290
+++ +++ + I P L L+ L + + L + ++I+ N
Sbjct: 81 KVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKMFPDLTKVYSTDIFFILEITDN 140
Query: 291 ELLGLIPNST 300
+ IP +
Sbjct: 141 PYMTSIPVNA 150
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 8e-18
Identities = 69/274 (25%), Positives = 120/274 (43%), Gaps = 45/274 (16%)
Query: 410 IGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
+G+G V GE +G VAVK + + + V + EI+ L RH +I+K Y
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKE------FSWIVRTNVIKSVANALSYMHH 522
S P F+V E + G L + + G ++E F I+ +A+ Y H
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL---------SAVDYCHR 129
Query: 523 DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL---- 578
+VHRD+ +NVLL + A+++DFG++ + G T G+ Y APE+
Sbjct: 130 HM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT-SCGSPNYAAPEVISGR 185
Query: 579 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP--- 635
Y + D++S GV+ ++ G P D ++ +I +P
Sbjct: 186 LYA---GPEVDIWSCGVILYALLCGTLPFD--------DEHVPTLFKKIRGGVFYIPEYL 234
Query: 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
+R++ L+ +L+V P R T++ + +
Sbjct: 235 NRSVATLLMHMLQV-------DPLKRATIKDIRE 261
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 85.7 bits (212), Expect = 9e-18
Identities = 59/300 (19%), Positives = 115/300 (38%), Gaps = 48/300 (16%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
K + + IG G Q V + VA+KK ++ +R E+ + +
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA-YRELVLMKCVN 119
Query: 460 HRNIVKFYG-FCSHPRHS-----FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSV 513
H+NI+ F +LV E ++ +L +++ + + S+++ +
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHERMSYLLY-----QM 173
Query: 514 ANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGY 573
+ ++H I+HRD+ N+++ S+ ++ DFG+A+ S T + T Y
Sbjct: 174 LCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYY 229
Query: 574 VAPELAYTMKVTEKCDVYSFGVLALEVIKGK---------------------HPRDFISL 612
APE+ M E D++S G + E+++ K +F+
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289
Query: 613 LSSSSSNMNLSLNEI-------LDPRLPLPSRNIQDKLISILEVALLC--LEESPESRPT 663
L + N + + L P P+ + +KL + LL L P R +
Sbjct: 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 349
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 84.0 bits (208), Expect = 1e-17
Identities = 58/199 (29%), Positives = 79/199 (39%), Gaps = 33/199 (16%)
Query: 410 IGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG G + E+VAVK + +VQRE I +RH NIV+F
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQRE----IINHRSLRHPNIVRFKE 83
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKE------FSWIVRTNVIKSVANALSYMHH 522
P H ++ E G L E + N G E F ++ + +SY H
Sbjct: 84 VILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLL---------SGVSYCHS 134
Query: 523 DCFPPIVHRDISSKNVLLSSEYEAR--VSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL-- 578
I HRD+ +N LL R + DFG +K S + GT Y+APE+
Sbjct: 135 MQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKS-TVGTPAYIAPEVLL 190
Query: 579 --AYTMKVTEKCDVYSFGV 595
Y K DV+S GV
Sbjct: 191 RQEYDGK---IADVWSCGV 206
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 82.3 bits (204), Expect = 1e-17
Identities = 55/216 (25%), Positives = 85/216 (39%), Gaps = 34/216 (15%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL-RNLAS 65
AIP ++ + K L L SN LS L +L L +++N+L +P + + L +
Sbjct: 30 AIPSNI--PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKL-QTLPAGIFKELKN 86
Query: 66 LNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNIT 125
L + + N L VF NL L + N +
Sbjct: 87 LETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQ------------------------LK 122
Query: 126 GSIPPEI-GKLYQLHKLDFSLNQIVGEIPIEL-GNLKSLNYLVLNGNKLSGNLPRVLGSL 183
S+PP + L +L L N++ +P + L SL L L N+L L
Sbjct: 123 -SLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKL 180
Query: 184 SELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNN 218
+EL+ L L N+L +PE +L K+ L L N
Sbjct: 181 TELKTLKLDNNQLK-RVPEGAFDSLEKLKMLQLQEN 215
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 8e-15
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 6/168 (3%)
Query: 127 SIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSEL 186
+IP I KLD N++ L L L LN NKL + L L
Sbjct: 30 AIPSNI--PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNL 87
Query: 187 EYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLG 245
E L ++ NKL ++P L+ + L L NQ + P + L +L+ L L +N L
Sbjct: 88 ETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ 146
Query: 246 GEIPPQIC-NLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
+P + L SL++L + +N L + F+ + L + + N+L
Sbjct: 147 -SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQL 193
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} Length = 270 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 3e-05
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 2 NHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
N L ++P V T+LK L LY+N L G L +L L++DNNQL +
Sbjct: 143 NELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAF 201
Query: 61 RNLASLNRVHLEQN 74
+L L + L++N
Sbjct: 202 DSLEKLKMLQLQEN 215
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 82.8 bits (205), Expect = 4e-17
Identities = 58/300 (19%), Positives = 114/300 (38%), Gaps = 48/300 (16%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
K + + IG G Q V + VA+KK ++ +R E+ + +
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRA-YRELVLMKCVN 82
Query: 460 HRNIVKFYG-FCSHPRHS-----FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSV 513
H+NI+ F ++V E ++ +L +++ + + S+++ +
Sbjct: 83 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHERMSYLLY-----QM 136
Query: 514 ANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGY 573
+ ++H I+HRD+ N+++ S+ ++ DFG+A+ S T + T Y
Sbjct: 137 LCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYY 192
Query: 574 VAPELAYTMKVTEKCDVYSFGVLALEVIKGK---------------------HPRDFISL 612
APE+ M E D++S G + E+IKG +F+
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKK 252
Query: 613 LSSSSSNMNLSLNEI-------LDPRLPLPSRNIQDKLISILEVALL--CLEESPESRPT 663
L + + + L P + P+ + +KL + LL L R +
Sbjct: 253 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 312
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 81.1 bits (201), Expect = 4e-17
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 38/210 (18%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVK---KFHSLLLSEISVQREFLNEIKALTEI 458
++D Q +G G V + E VAVK ++ E ++++E I +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKE----ICINKML 62
Query: 459 RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKE------FSWIVRTNVIKS 512
H N+VKFYG +L E G L + + D + E F ++
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM------- 115
Query: 513 VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW---TEFAG 569
+ Y+H I HRDI +N+LL ++SDFG+A + + G
Sbjct: 116 --AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCG 169
Query: 570 TFGYVAPEL----AYTMKVTEKCDVYSFGV 595
T YVAPEL + E DV+S G+
Sbjct: 170 TLPYVAPELLKRREFH---AEPVDVWSCGI 196
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 80.4 bits (199), Expect = 1e-16
Identities = 57/283 (20%), Positives = 108/283 (38%), Gaps = 55/283 (19%)
Query: 410 IGIGGQASVYRGE-LPSGEVVAVK-----KFHSLLLSEISVQREFLNEIKALTEIRHRNI 463
+G G V + AVK K + E +V++E I+ L +RH+N+
Sbjct: 13 LGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKE----IQLLRRLRHKNV 68
Query: 464 VKFYGFCSH--PRHSFLVYECLERGSLAEI--------LSNDGSIKEFSWIVRTNVIKSV 513
++ + + ++V E + E+ + F ++
Sbjct: 69 IQLVDVLYNEEKQKMYMVMEYCV-CGMQEMLDSVPEKRFPVCQAHGYFCQLI-------- 119
Query: 514 ANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT--EFAGTF 571
+ L Y+H IVH+DI N+LL++ ++S G+A+ L P +++ T G+
Sbjct: 120 -DGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSP 175
Query: 572 GYVAPELAYTMKVTE--KCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD 629
+ PE+A + K D++S GV + G +P + N+ I
Sbjct: 176 AFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE--------GDNIYKLFENIGK 227
Query: 630 PRLPLP---SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
+P + D L +LE P R +++ + Q
Sbjct: 228 GSYAIPGDCGPPLSDLLKGMLEY-------EPAKRFSIRQIRQ 263
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 80.0 bits (198), Expect = 2e-16
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 38/210 (18%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVK---KFHSLLLSEISVQREFLNEIKALTEI 458
++D Q +G G V + E VAVK ++ E ++++E I +
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKE----ICINKML 62
Query: 459 RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKE------FSWIVRTNVIKS 512
H N+VKFYG +L E G L + + D + E F ++
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM------- 115
Query: 513 VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW---TEFAG 569
+ Y+H I HRDI +N+LL ++SDFG+A + + G
Sbjct: 116 --AGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-MCG 169
Query: 570 TFGYVAPEL----AYTMKVTEKCDVYSFGV 595
T YVAPEL + E DV+S G+
Sbjct: 170 TLPYVAPELLKRREFH---AEPVDVWSCGI 196
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 81.4 bits (201), Expect = 2e-16
Identities = 67/274 (24%), Positives = 117/274 (42%), Gaps = 45/274 (16%)
Query: 410 IGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
+G+G V G+ +G VAVK + + + V + EI+ L RH +I+K Y
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKE------FSWIVRTNVIKSVANALSYMHH 522
S P F+V E + G L + + +G + E F I+ + + Y H
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQIL---------SGVDYCHR 134
Query: 523 DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL---- 578
+VHRD+ +NVLL + A+++DFG++ + G T G+ Y APE+
Sbjct: 135 HM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRT-SCGSPNYAAPEVISGR 190
Query: 579 AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP--- 635
Y + D++S GV+ ++ G P D ++ +I D P
Sbjct: 191 LYA---GPEVDIWSSGVILYALLCGTLPFD--------DDHVPTLFKKICDGIFYTPQYL 239
Query: 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
+ ++ L +L+V P R T++ + +
Sbjct: 240 NPSVISLLKHMLQV-------DPMKRATIKDIRE 266
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 3e-16
Identities = 60/281 (21%), Positives = 107/281 (38%), Gaps = 46/281 (16%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
+ + +G G V + + VA+K LL + + EI L +RH
Sbjct: 10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHP 69
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKE------FSWIVRTNVIKSVAN 515
+I+K Y + P +V E G L + + + E F I+
Sbjct: 70 HIIKLYDVITTPTDIVMVIEYAG-GELFDYIVEKKRMTEDEGRRFFQQII---------C 119
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVA 575
A+ Y H IVHRD+ +N+LL +++DFG++ + G+ T G+ Y A
Sbjct: 120 AIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKT-SCGSPNYAA 175
Query: 576 PEL----AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631
PE+ Y + DV+S G++ ++ G+ P D + ++
Sbjct: 176 PEVINGKLYA---GPEVDVWSCGIVLYVMLVGRLPFD--------DEFIPNLFKKVNSCV 224
Query: 632 LPLP---SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
+P S Q + ++ P R T+Q + +
Sbjct: 225 YVMPDFLSPGAQSLIRRMIVA-------DPMQRITIQEIRR 258
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 3e-16
Identities = 58/243 (23%), Positives = 92/243 (37%), Gaps = 46/243 (18%)
Query: 387 TFEGKIVYEEIIRATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQ 445
E + F E+ G G +V G E +G VA+KK ++
Sbjct: 8 LNAAAAADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKK---VIQDPRFRN 64
Query: 446 REFLNEIKALTEIRHRNIVK-FYGFCSHPRHSF------LVYECLE---------RGSLA 489
RE L ++ L + H NIV+ F + +V E +
Sbjct: 65 RE-LQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQ 123
Query: 490 EILSNDGSIKEFSW-IVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL-SSEYEAR 547
IK F + ++R ++ +H + HRDI NVL+ ++ +
Sbjct: 124 VAPPPI-LIKVFLFQLIR---------SIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLK 172
Query: 548 VSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL-----AYTMKVTEKCDVYSFG-VLALEVI 601
+ DFG AK L P N + + Y APEL YT V D++S G + A E++
Sbjct: 173 LCDFGSAKKLSPSEPN-VAYICSRYYRAPELIFGNQHYTTAV----DIWSVGCIFA-EMM 226
Query: 602 KGK 604
G+
Sbjct: 227 LGE 229
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 2e-15
Identities = 52/212 (24%), Positives = 95/212 (44%), Gaps = 21/212 (9%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
K + + +G G SV + SGE VA+KK SEI +R E+ L ++
Sbjct: 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRA-YRELLLLKHMQ 81
Query: 460 HRNIVKFYGFCSHPRHS------FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSV 513
H N++ + +LV ++ L +I+ S ++ ++V +
Sbjct: 82 HENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLKFSEEKIQYLVY-----QM 135
Query: 514 ANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGY 573
L Y+H +VHRD+ N+ ++ + E ++ DFG+A + + T + T Y
Sbjct: 136 LKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLA---RHADAEMTGYVVTRWY 189
Query: 574 VAPELAYT-MKVTEKCDVYSFGVLALEVIKGK 604
APE+ + M + D++S G + E++ GK
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 77.4 bits (191), Expect = 3e-15
Identities = 61/230 (26%), Positives = 98/230 (42%), Gaps = 54/230 (23%)
Query: 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLN-EIKALTEI 458
++ + IG G VY+ +L SGE+VA+KK + + F N E++ + ++
Sbjct: 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKK--------VLQDKRFKNRELQIMRKL 104
Query: 459 RHRNIVKFYGFCSHPRHSF------LVYECLE---------RGSLAEILSNDGSIKEFSW 503
H NIV+ F LV + + + L +K + +
Sbjct: 105 DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVI-YVKLYMY 163
Query: 504 -IVRTNVIKSVANALSYMH-HDCFPPIVHRDISSKNVLLSSE-YEARVSDFGIAKFLKPG 560
+ R +L+Y+H I HRDI +N+LL + ++ DFG AK L G
Sbjct: 164 QLFR---------SLAYIHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG 210
Query: 561 SSNWTEFAGTFGYVAPEL-----AYTMKVTEKCDVYSFG-VLALEVIKGK 604
N + + Y APEL YT + DV+S G VLA E++ G+
Sbjct: 211 EPN-VSYICSRYYRAPELIFGATDYTSSI----DVWSAGCVLA-ELLLGQ 254
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 75.8 bits (187), Expect = 6e-15
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 32/218 (14%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
+ Q +G G +V + +G VA+KK + SE+ +R E++ L +R
Sbjct: 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRA-YRELRLLKHMR 82
Query: 460 HRNIVKFYGFCSHPRHSF-------LVYECLERGSLAEILSN----DGSIKEFSW-IVRT 507
H N++ P + LV + L +++ + + I+ + +++
Sbjct: 83 HENVIGLLD-VFTPDETLDDFTDFYLVMPFMGT-DLGKLMKHEKLGEDRIQFLVYQMLK- 139
Query: 508 NVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEF 567
L Y+H I+HRD+ N+ ++ + E ++ DFG+A + S T +
Sbjct: 140 --------GLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLA---RQADSEMTGY 185
Query: 568 AGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGK 604
T Y APE+ M+ T+ D++S G + E+I GK
Sbjct: 186 VVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 75.3 bits (186), Expect = 7e-15
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
+G G V + +G +VA+KKF ++ V++ + EIK L ++RH N+V
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKM-VKKIAMREIKLLKQLRHENLVNLLE 91
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPI 528
C + +LV+E ++ ++ + L + + V + + N + + H I
Sbjct: 92 VCKKKKRWYLVFEFVDH-TILDDL--ELFPNGLDYQVVQKYLFQIINGIGFCHSHN---I 145
Query: 529 VHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL-----AYTMK 583
+HRDI +N+L+S ++ DFG A+ L + + T Y APEL Y
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKA 205
Query: 584 VTEKCDVYSFGVLALEVIKGK 604
V DV++ G L E+ G+
Sbjct: 206 V----DVWAIGCLVTEMFMGE 222
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 7e-15
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 26/191 (13%)
Query: 415 QASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP- 473
QA R P G A V +E I L ++ H N+VK P
Sbjct: 54 QAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQE----IAILKKLDHPNVVKLVEVLDDPN 109
Query: 474 -RHSFLVYECLERGSLAEI-----LSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPP 527
H ++V+E + +G + E+ LS D + F ++ + Y+H+
Sbjct: 110 EDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLI---------KGIEYLHYQK--- 157
Query: 528 IVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVT-- 585
I+HRDI N+L+ + +++DFG++ K + + GT ++APE +
Sbjct: 158 IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFS 217
Query: 586 -EKCDVYSFGV 595
+ DV++ GV
Sbjct: 218 GKALDVWAMGV 228
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 73.1 bits (180), Expect = 8e-15
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 6/130 (4%)
Query: 116 TLNFSMNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIEL-GNLKSLNYLVLNGNKLS 173
+ N I IPP +L ++D S NQI E+ + L+SLN LVL GNK++
Sbjct: 36 EIRLEQNTIK-VIPPGAFSPYKKLRRIDLSNNQIS-ELAPDAFQGLRSLNSLVLYGNKIT 93
Query: 174 GNLPRVLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQFRKEFPVELEKLV 232
+ L L+ L L+ NK++ + +L ++ L+L +N+ + L
Sbjct: 94 ELPKSLFEGLFSLQLLLLNANKIN-CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLR 152
Query: 233 QLSELDLSHN 242
+ + L+ N
Sbjct: 153 AIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 2e-12
Identities = 43/168 (25%), Positives = 63/168 (37%), Gaps = 36/168 (21%)
Query: 56 IPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLG 115
+P ++ + LEQN + F Y L +D+S+N Q+
Sbjct: 30 LPETITEI------RLEQNTIKVIPPGAFSPYKKLRRIDLSNN--------------QIS 69
Query: 116 TLNFSMNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIEL-GNLKSLNYLVLNGNKLS 173
L P+ L L+ L N+I E+P L L SL L+LN NK++
Sbjct: 70 EL-----------APDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKIN 117
Query: 174 GNLPR-VLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQF 220
L L L L L NKL T L + ++L+ N F
Sbjct: 118 -CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 5e-11
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 187 EYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGG 246
+ L N + P K+ ++LSNNQ + P + L L+ L L N +
Sbjct: 35 TEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT- 93
Query: 247 EIPPQI-CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
E+P + L SL+ L ++ N ++ L F+ +H L+ + + N+L
Sbjct: 94 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKL 140
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 8e-10
Identities = 29/165 (17%), Positives = 60/165 (36%), Gaps = 28/165 (16%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
IP ++ + + L N++ PG +L +++ NNQ+ P + + L SL
Sbjct: 25 EIPTNL--PETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSL 82
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITG 126
N + L N +T +F +L L ++ N ++
Sbjct: 83 NSLVLYGNKITELPKSLFEGLFSLQLLLLNAN--------------KI-----------N 117
Query: 127 SIPPEI-GKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGN 170
+ + L+ L+ L N++ L+++ + L N
Sbjct: 118 CLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 162
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 2e-08
Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 4/101 (3%)
Query: 2 NHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPR-S 59
N +S + P +L L LY N ++ L L L ++ N++ + +
Sbjct: 66 NQIS-ELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKI-NCLRVDA 123
Query: 60 LRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNF 100
++L +LN + L N L F + + ++ N F
Sbjct: 124 FQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 5e-08
Identities = 23/100 (23%), Positives = 37/100 (37%), Gaps = 2/100 (2%)
Query: 2 NHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
N + IPP + L+ + L +N +S P L L +L + N++
Sbjct: 42 NTIK-VIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLF 100
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNF 100
L SL + L N + + F NL L + N
Sbjct: 101 EGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKL 140
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A Length = 220 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 7e-07
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 200 IPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICN-LESL 258
+PET + + L N + P +L +DLS+N + E+ P L SL
Sbjct: 30 LPET------ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQIS-ELAPDAFQGLRSL 82
Query: 259 EKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
L + N ++ L S FEG+ L + ++ N++
Sbjct: 83 NSLVLYGNKITELPKSLFEGLFSLQLLLLNANKI 116
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 75.4 bits (186), Expect = 1e-14
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 25/147 (17%)
Query: 513 VANALSYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF 571
+ AL Y+ I+HRD+ N+LL ++DF IA L + T AGT
Sbjct: 124 LVMALDYLQNQR----IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT-MAGTK 178
Query: 572 GYVAPEL-------AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSL 624
Y+APE+ Y+ V D +S GV A E+++G+ P + S+SS + +
Sbjct: 179 PYMAPEMFSSRKGAGYSFAV----DWWSLGVTAYELLRGRRP--YHIRSSTSSKEI---V 229
Query: 625 NEILDPRLPLP---SRNIQDKLISILE 648
+ + P S+ + L +LE
Sbjct: 230 HTFETTVVTYPSAWSQEMVSLLKKLLE 256
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 74.1 bits (183), Expect = 1e-14
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 25/205 (12%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
IG G V++ +G++VA+KKF + +++ L EI+ L +++H N+V
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPV-IKKIALREIRMLKQLKHPNLVNLLE 69
Query: 469 FCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKS----VANALSYMHHDC 524
R LV+E + L E+ + E +++KS A+++ H
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPE-------HLVKSITWQTLQAVNFCHKHN 122
Query: 525 FPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL-----A 579
+HRD+ +N+L++ ++ DFG A+ L S + + T Y +PEL
Sbjct: 123 ---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQ 179
Query: 580 YTMKVTEKCDVYSFGVLALEVIKGK 604
Y V DV++ G + E++ G
Sbjct: 180 YGPPV----DVWAIGCVFAELLSGV 200
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 1e-14
Identities = 51/218 (23%), Positives = 90/218 (41%), Gaps = 32/218 (14%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
+ + +G G SV + +G VAVKK S I +R E++ L ++
Sbjct: 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT-YRELRLLKHMK 86
Query: 460 HRNIVKFYGFCSHPRHSF-------LVYECLERGSLAEILS----NDGSIKEFSW-IVRT 507
H N++ P S LV + L I+ D ++ + I+R
Sbjct: 87 HENVIGLLD-VFTPARSLEEFNDVYLVTHLMG-ADLNNIVKCQKLTDDHVQFLIYQILR- 143
Query: 508 NVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEF 567
L Y+H I+HRD+ N+ ++ + E ++ DFG+A + + T +
Sbjct: 144 --------GLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLA---RHTADEMTGY 189
Query: 568 AGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGK 604
T Y APE+ M + D++S G + E++ G+
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 74.2 bits (183), Expect = 2e-14
Identities = 49/211 (23%), Positives = 84/211 (39%), Gaps = 38/211 (18%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFY 467
+G G + V+ + + E V VK + +I EIK L +R NI+
Sbjct: 44 LGRGKYSEVFEAINITNNEKVVVKILKPVKKKKI------KREIKILENLRGGPNIITLA 97
Query: 468 GFCSHPRHSF---LVYECLERGSLAEILS--NDGSIKEFSWIVRTNVIKSVANALSYMH- 521
S LV+E + ++ D I+ + + + AL Y H
Sbjct: 98 D-IVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFY--------MYEILKALDYCHS 148
Query: 522 HDCFPPIVHRDISSKNVLLSSEY-EARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL-- 578
I+HRD+ NV++ E+ + R+ D+G+A+F PG + + + PEL
Sbjct: 149 MG----IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPELLV 203
Query: 579 ---AYTMKVTEKCDVYSFGVLALEVIKGKHP 606
Y + D++S G + +I K P
Sbjct: 204 DYQMYDYSL----DMWSLGCMLASMIFRKEP 230
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 70.8 bits (174), Expect = 5e-14
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 11/133 (8%)
Query: 116 TLNFSMNNITGSIPPEIG--KLYQLHKLDFSLNQIVGEIPIELG---NLKSLNYLVLNGN 170
L + N T + KL QL K++FS N+I IE G +N ++L N
Sbjct: 36 ELRLNNNEFT-VLEATGIFKKLPQLRKINFSNNKITD---IEEGAFEGASGVNEILLTSN 91
Query: 171 KLSGNLPRVLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQFRKEFPVELE 229
+L ++ L L+ L L +N+++ + + L V L+L +NQ P +
Sbjct: 92 RLENVQHKMFKGLESLKTLMLRSNRIT-CVGNDSFIGLSSVRLLSLYDNQITTVAPGAFD 150
Query: 230 KLVQLSELDLSHN 242
L LS L+L N
Sbjct: 151 TLHSLSTLNLLAN 163
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 1e-11
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 7/140 (5%)
Query: 85 GIYPNLTFLDISHNNFYG-EIWSSWGKCQQLGTLNFSMNNITGSIPPEI-GKLYQLHKLD 142
I L +++N F E + K QL +NFS N IT I ++++
Sbjct: 29 HIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT-DIEEGAFEGASGVNEIL 87
Query: 143 FSLNQIVGEIPIEL-GNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIP 201
+ N++ + ++ L+SL L+L N+++ LS + L L N+++ ++
Sbjct: 88 LTSNRLE-NVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQIT-TVA 145
Query: 202 E-TLGNLLKVHYLNLSNNQF 220
L + LNL N F
Sbjct: 146 PGAFDTLHSLSTLNLLANPF 165
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 3e-10
Identities = 23/112 (20%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Query: 184 SELEYLDLSTNKLSGSIPET--LGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
L L+ N+ + + T L ++ +N SNN+ E ++E+ L+
Sbjct: 32 QYTAELRLNNNEFT-VLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90
Query: 242 NFLGGEIPPQIC-NLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
N L + ++ LESL+ L + N ++ + F G+ + + + N++
Sbjct: 91 NRLE-NVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQI 141
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Query: 2 NHLSGAIPPSVGNF---TNLKGLYLYSNSLSGSVPGEI-GNLMQLTNLEIDNNQLFGQIP 57
N ++ I F + + + L SN L +V ++ L L L + +N++
Sbjct: 67 NKIT-DIEEGA--FEGASGVNEILLTSNRLE-NVQHKMFKGLESLKTLMLRSNRITCVGN 122
Query: 58 RSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNF 100
S L+S+ + L N +T F +L+ L++ N F
Sbjct: 123 DSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPF 165
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} Length = 220 | Back alignment and structure |
|---|
Score = 48.5 bits (116), Expect = 2e-06
Identities = 16/94 (17%), Positives = 36/94 (38%), Gaps = 3/94 (3%)
Query: 10 PSVGNF---TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
+ G F L+ + +N ++ G + + + +N+L + + L SL
Sbjct: 48 EATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESL 107
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNF 100
+ L N +T ++ F ++ L + N
Sbjct: 108 KTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQI 141
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 72.8 bits (179), Expect = 6e-14
Identities = 40/317 (12%), Positives = 92/317 (29%), Gaps = 60/317 (18%)
Query: 12 VGNFTNLKGLYLYSNSLSG----SVPGEIGNLMQLTNLEIDNNQL----FGQIPRSLRNL 63
+ F+ ++G L ++++ SV + + + + N + + ++ +
Sbjct: 1 MARFS-IEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASK 59
Query: 64 ASLNRVHLEQNHL----------TGNISEVFGIYPNLTFLDISHNNFYGE----IWSSWG 109
L + + P L + +S N F +
Sbjct: 60 KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLS 119
Query: 110 KCQQLGTLNFSMNNIT-------------GSIPPEIGKLYQLHKLDFSLNQI----VGEI 152
K L L N + ++ + L + N++ + E
Sbjct: 120 KHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEW 179
Query: 153 PIELGNLKSLNYLVLNGNKL-----SGNLPRVLGSLSELEYLDLSTNKLSG----SIPET 203
+ + L+ + + N + L L EL+ LDL N + ++
Sbjct: 180 AKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA 239
Query: 204 LGNLLKVHYLNLSNNQFRKEFPVELEKLVQ------LSELDLSHNFLGGEIPPQIC---- 253
L + + L L++ + L L L +N + + +
Sbjct: 240 LKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVID 299
Query: 254 -NLESLEKLNVSHNNLS 269
+ L L ++ N S
Sbjct: 300 EKMPDLLFLELNGNRFS 316
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 5e-09
Identities = 32/223 (14%), Positives = 66/223 (29%), Gaps = 44/223 (19%)
Query: 114 LGTLNFSMNNITG----SIPPEIGKLYQLHKLDFSLNQI-------VGEIPIELGNLKSL 162
+ + ++ IT S+ + + + ++ S N I + E +L+
Sbjct: 6 IEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIA 65
Query: 163 NYLVLNGNKLSGNLPRVLGSLSE-------LEYLDLSTNKLSGSIPETLGNLLKVH---- 211
+ + ++ +P L L + L + LS N + E L + L H
Sbjct: 66 EFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLE 125
Query: 212 YLNLSNNQFRKE-------------FPVELEKLVQLSELDLSHNFLGGE----IPPQICN 254
+L L NN + + + L + N L +
Sbjct: 126 HLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 185
Query: 255 LESLEKLNVSHNNL-----SGLIPSCFEGMHGLSCIDISYNEL 292
L + + N + L+ L +D+ N
Sbjct: 186 HRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTF 228
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A Length = 386 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 7e-08
Identities = 42/279 (15%), Positives = 81/279 (29%), Gaps = 63/279 (22%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQ----LTNLEIDNNQL---------- 52
+ ++ L + L N+ + + + + L +L + NN L
Sbjct: 85 LLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIAR 144
Query: 53 ---FGQIPRSLRNLASLNRVHLEQNHLTGN----ISEVFGIYPNLTFLDISHNNFYGE-- 103
+ + +N L + +N L ++ F + L + + N E
Sbjct: 145 ALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGI 204
Query: 104 ---IWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLK 160
+ CQ+L L+ N T + L +
Sbjct: 205 EHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIA--------------------LKSWP 244
Query: 161 SLNYLVLNGNKLSGN----LPRVL--GSLSELEYLDLSTNKLSGSIPETLGNLLKVH--- 211
+L L LN LS + L+ L L N++ TL ++
Sbjct: 245 NLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPD 304
Query: 212 --YLNLSNNQFRKEFPVE------LEKLVQLSELDLSHN 242
+L L+ N+F +E V + +L
Sbjct: 305 LLFLELNGNRFSEEDDVVDEIREVFSTRGRGELDELDDM 343
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 72.1 bits (177), Expect = 1e-13
Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 37/220 (16%)
Query: 399 RATKNFDAEQC-IGIGGQASVYRG---ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKA 454
R F+ E C +G G VY+ + + A+K+ +S +S RE I
Sbjct: 17 RVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS-MSACRE----IAL 71
Query: 455 LTEIRHRNIVKFYG-FCSHPRHS-FLVYECLERGSLAEILSNDGSIKEFSWIVR--TNVI 510
L E++H N++ F SH +L+++ E L I+ + K V+ ++
Sbjct: 72 LRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMV 130
Query: 511 KSVA----NALSYMHHDCFPPIVHRDISSKNVLLSSEYEAR----VSDFGIAKFLKPGSS 562
KS+ + + Y+H + ++HRD+ N+L+ E R ++D G A+
Sbjct: 131 KSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK 187
Query: 563 NWTEFAG---TFGYVAPEL-----AYTMKVTEKCDVYSFG 594
+ TF Y APEL YT + D+++ G
Sbjct: 188 PLADLDPVVVTFWYRAPELLLGARHYTKAI----DIWAIG 223
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 2e-13
Identities = 49/234 (20%), Positives = 86/234 (36%), Gaps = 37/234 (15%)
Query: 393 VYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLN-- 450
+ E+ + ++ I G +V G G VA+K+ + + S+ +
Sbjct: 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTV-SDGRTVNILSDSF 71
Query: 451 -------EIKALTEIRHRNIVKFYG-FCSHPRHSF----LVYECLER------GSLAEIL 492
EI+ L H NI+ F + LV E + ++
Sbjct: 72 LCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVI 131
Query: 493 SNDGSIKEFSW-IVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDF 551
S I+ F + I+ L +H +VHRD+ N+LL+ + + DF
Sbjct: 132 SPQ-HIQYFMYHILL---------GLHVLHE---AGVVHRDLHPGNILLADNNDITICDF 178
Query: 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGK 604
+A+ +N T + Y APEL T+ D++S G + E+ K
Sbjct: 179 NLAREDTA-DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 70.2 bits (173), Expect = 2e-13
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 30/207 (14%)
Query: 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSE---ISVQREFLNEIKALTEIRHRNIVKF 466
IG G VY+ + GE A+KK E + RE I L E++H NIVK
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIRE----ISILKELKHSNIVKL 65
Query: 467 YGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA----NALSYMHH 522
Y + LV+E L++ L ++L + KS N ++Y H
Sbjct: 66 YDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGG--LE----SVTAKSFLLQLLNGIAYCHD 118
Query: 523 DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL---- 578
++HRD+ +N+L++ E E +++DFG+A+ +T T Y AP++
Sbjct: 119 RR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS 175
Query: 579 -AYTMKVTEKCDVYSFGVLALEVIKGK 604
Y+ + D++S G + E++ G
Sbjct: 176 KKYSTTI----DIWSVGCIFAEMVNGT 198
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 2e-13
Identities = 51/217 (23%), Positives = 93/217 (42%), Gaps = 27/217 (12%)
Query: 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVK---KFHSLLLSEISVQREFLNEIKALTE 457
++F + +G G ++V EL + A+K K H + +++ E ++
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKV---PYVTRERDVMSR 86
Query: 458 IRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIK----SV 513
+ H VK Y + + G L + + GS E + +
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE-------TCTRFYTAEI 139
Query: 514 ANALSYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN---WTEFAG 569
+AL Y+H I+HRD+ +N+LL+ + +++DFG AK L P S + F G
Sbjct: 140 VSALEYLHGKG----IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANS-FVG 194
Query: 570 TFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
T YV+PEL + D+++ G + +++ G P
Sbjct: 195 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPP 231
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 71.2 bits (175), Expect = 2e-13
Identities = 59/227 (25%), Positives = 94/227 (41%), Gaps = 46/227 (20%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKK---FHSLLLSEISVQREFLNEIKALT 456
+ IG G V + + VA+KK F QR L EIK L
Sbjct: 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC----QRT-LREIKILL 80
Query: 457 EIRHRNIVKFYG-FCSHPRHSF----LVYECLE----RGSLAEILSNDGSIKEFSW-IVR 506
RH NI+ + +V + +E + + LSND I F + I+R
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSND-HICYFLYQILR 139
Query: 507 TNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN--- 563
L Y+H ++HRD+ N+LL++ + ++ DFG+A+ P +
Sbjct: 140 ---------GLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 187
Query: 564 WTEFAGTFGYVAPEL-----AYTMKVTEKCDVYSFG-VLALEVIKGK 604
TE+ T Y APE+ YT + D++S G +LA E++ +
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSI----DIWSVGCILA-EMLSNR 229
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 3e-13
Identities = 56/230 (24%), Positives = 101/230 (43%), Gaps = 44/230 (19%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKK--FHSLLLSEISVQREFLNEI 452
++ K ++ +G G A+VY+ + + ++VA+KK ++ + R L EI
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 453 KALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKS 512
K L E+ H NI+ H + LV++ +E L I+ ++ + + + IK+
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLV--LT----PSHIKA 116
Query: 513 ----VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF----LKPGSSN- 563
L Y+H I+HRD+ N+LL +++DFG+AK + +
Sbjct: 117 YMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQV 173
Query: 564 ---WTEFAGTFGYVAPEL-----AYTMKVTEKCDVYSFG-VLALEVIKGK 604
W Y APEL Y + V D+++ G +LA E++
Sbjct: 174 VTRW--------YRAPELLFGARMYGVGV----DMWAVGCILA-ELLLRV 210
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 70.3 bits (173), Expect = 3e-13
Identities = 47/219 (21%), Positives = 100/219 (45%), Gaps = 38/219 (17%)
Query: 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQRE------FLNEIKA 454
+ + +G G A+VY+G + +VA+K+ I ++ E + E+
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKE--------IRLEHEEGAPCTAIREVSL 53
Query: 455 LTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKS-- 512
L +++H NIV + + LV+E L++ L + L + G+I + + +K
Sbjct: 54 LKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNI--IN----MHNVKLFL 106
Query: 513 --VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT 570
+ L+Y H ++HRD+ +N+L++ E +++DFG+A+ + + T
Sbjct: 107 FQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVT 163
Query: 571 FGYVAPEL-----AYTMKVTEKCDVYSFGVLALEVIKGK 604
Y P++ Y+ ++ D++ G + E+ G+
Sbjct: 164 LWYRPPDILLGSTDYSTQI----DMWGVGCIFYEMATGR 198
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 3e-13
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 30/207 (14%)
Query: 410 IGIGGQASVYRGELPSGEVVAVKKFHSLLLSE---ISVQREFLNEIKALTEIRHRNIVKF 466
+G G VY+ + G +VA+K+ E + RE I L E+ H NIV
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE----ISLLKELHHPNIVSL 84
Query: 467 YGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA----NALSYMHH 522
R LV+E +E+ L ++L + + + IK +++ H
Sbjct: 85 IDVIHSERCLTLVFEFMEK-DLKKVLDENKTG--LQ----DSQIKIYLYQLLRGVAHCHQ 137
Query: 523 DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL---- 578
I+HRD+ +N+L++S+ +++DFG+A+ ++T T Y AP++
Sbjct: 138 HR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGS 194
Query: 579 -AYTMKVTEKCDVYSFGVLALEVIKGK 604
Y+ V D++S G + E+I GK
Sbjct: 195 KKYSTSV----DIWSIGCIFAEMITGK 217
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 70.4 bits (173), Expect = 4e-13
Identities = 60/253 (23%), Positives = 106/253 (41%), Gaps = 57/253 (22%)
Query: 377 ENHRGLLSILTFEGKIVYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHS 436
++ ++ +L +GK + I + + IG G V++ +L + VA+KK
Sbjct: 19 DDPNKVIKVLASDGKTGEQREIA----YTNCKVIGNGSFGVVFQAKLVESDEVAIKK--- 71
Query: 437 LLLSEISVQREFLN-EIKALTEIRHRNIVKFYGFCSHPRHS------FLVYECLE----- 484
+ + F N E++ + ++H N+V F LV E +
Sbjct: 72 -----VLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYR 126
Query: 485 ----RGSLAEILSNDGSIKEFSW-IVRTNVIKSVANALSYMH-HDCFPPIVHRDISSKNV 538
L + + IK + + ++R +L+Y+H I HRDI +N+
Sbjct: 127 ASRHYAKLKQTMPML-LIKLYMYQLLR---------SLAYIHSIG----ICHRDIKPQNL 172
Query: 539 LLSSE-YEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL-----AYTMKVTEKCDVYS 592
LL ++ DFG AK L G N + + Y APEL YT + D++S
Sbjct: 173 LLDPPSGVLKLIDFGSAKILIAGEPN-VSYICSRYYRAPELIFGATNYTTNI----DIWS 227
Query: 593 FG-VLALEVIKGK 604
G V+A E+++G+
Sbjct: 228 TGCVMA-ELMQGQ 239
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 4e-13
Identities = 50/226 (22%), Positives = 90/226 (39%), Gaps = 41/226 (18%)
Query: 399 RATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSE-----ISVQREFLNEI 452
+ + +G G VY+ + + E VA+K+ L E + RE +
Sbjct: 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR--LEHEEEGVPGTAIRE----V 84
Query: 453 KALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKS 512
L E++HRNI++ H L++E E L + + + + VIKS
Sbjct: 85 SLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSM-------RVIKS 136
Query: 513 ----VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEAR-----VSDFGIAKFLKPGSSN 563
+ N +++ H +HRD+ +N+LLS + + DFG+A+
Sbjct: 137 FLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ 193
Query: 564 WTEFAGTFGYVAPEL-----AYTMKVTEKCDVYSFGVLALEVIKGK 604
+T T Y PE+ Y+ V D++S + E++
Sbjct: 194 FTHEIITLWYRPPEILLGSRHYSTSV----DIWSIACIWAEMLMKT 235
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 5e-13
Identities = 52/217 (23%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 398 IRATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALT 456
+ ++ F + +G G A+VY+G +G VA+K+ L SE + EI +
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVK--LDSEEGTPSTAIREISLMK 58
Query: 457 EIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA-- 514
E++H NIV+ Y LV+E ++ L + + + ++ + N++K
Sbjct: 59 ELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYM-DSRTVGNTPRGLELNLVKYFQWQ 116
Query: 515 --NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFG 572
L++ H + I+HRD+ +N+L++ + ++ DFG+A+ + ++ T
Sbjct: 117 LLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLW 173
Query: 573 YVAPEL-----AYTMKVTEKCDVYSFGVLALEVIKGK 604
Y AP++ Y+ + D++S G + E+I GK
Sbjct: 174 YRAPDVLMGSRTYSTSI----DIWSCGCILAEMITGK 206
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 7e-13
Identities = 42/197 (21%), Positives = 81/197 (41%), Gaps = 45/197 (22%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFY 467
+G+G V + + E A+K + + E++ + +IV+
Sbjct: 26 LGLGINGKVLQIFNKRTQEKFALKM--------LQDCPKARREVELHWRASQCPHIVRIV 77
Query: 468 GFC----SHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH-H 522
+ + +V ECL+ G L + + G + F+ + ++KS+ A+ Y+H
Sbjct: 78 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSI 136
Query: 523 DCFPPIVHRDISSKNVLLSSEYEA---RVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELA 579
+ I HRD+ +N+L +S+ +++DFG AK E G Y
Sbjct: 137 N----IAHRDVKPENLLYTSKRPNAILKLTDFGFAK----------ETTGE-KY------ 175
Query: 580 YTMKVTEKCDVYSFGVL 596
+ CD++S GV+
Sbjct: 176 -----DKSCDMWSLGVI 187
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 70.2 bits (172), Expect = 9e-13
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 24/215 (11%)
Query: 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQRE----FLNEIKALT 456
F + +G GG V ++ +G++ A KK L + +R+ LNE + L
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKK----LEKKRIKKRKGEAMALNEKQILE 239
Query: 457 EIRHRNIVK-FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVAN 515
++ R +V Y + + LV + G L + + G F +
Sbjct: 240 KVNSRFVVSLAYAYET-KDALCLVLTLMNGGDLKFHIYHMGQ-AGFPEARAVFYAAEICC 297
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVA 575
L +H + IV+RD+ +N+LL R+SD G+A + G + GT GY+A
Sbjct: 298 GLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKG-RVGTVGYMA 353
Query: 576 PEL----AYTMKVTEKCDVYSFGVLALEVIKGKHP 606
PE+ YT D ++ G L E+I G+ P
Sbjct: 354 PEVVKNERYTFSP----DWWALGCLLYEMIAGQSP 384
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 68.8 bits (169), Expect = 1e-12
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 49/234 (20%)
Query: 399 RATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSE-----ISVQREFLNEI 452
++ IG G V++ +G+ VA+KK + +E I+ RE I
Sbjct: 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVL--MENEKEGFPITALRE----I 67
Query: 453 KALTEIRHRNIVKFYGFCSHPRHS--------FLVYECLERGSLAEILSNDGSIKEFSWI 504
K L ++H N+V C +LV++ E LA +LSN +F+
Sbjct: 68 KILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVL--VKFT-- 122
Query: 505 VRTNVIKSVA----NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA-KFLKP 559
+ IK V N L Y+H + I+HRD+ + NVL++ + +++DFG+A F
Sbjct: 123 --LSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLA 177
Query: 560 GSSNWTEFAG---TFGYVAPEL-----AYTMKVTEKCDVYSFG-VLALEVIKGK 604
+S + T Y PEL Y + D++ G ++A E+
Sbjct: 178 KNSQPNRYTNRVVTLWYRPPELLLGERDYGPPI----DLWGAGCIMA-EMWTRS 226
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 67.9 bits (167), Expect = 1e-12
Identities = 43/214 (20%), Positives = 91/214 (42%), Gaps = 39/214 (18%)
Query: 410 IGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREF-------LNEIKALTEIRHR 461
IG G +V++ + E+VA+K+ + + + L EI L E++H+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKR--------VRLDDDDEGVPSSALREICLLKELKHK 61
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA----NAL 517
NIV+ + + LV+E ++ L + + + ++KS L
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCN--GDLD----PEIVKSFLFQLLKGL 114
Query: 518 SYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE 577
+ H ++HRD+ +N+L++ E ++++FG+A+ ++ T Y P+
Sbjct: 115 GFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPD 171
Query: 578 L-----AYTMKVTEKCDVYSFGVLALEVIKGKHP 606
+ Y+ + D++S G + E+ P
Sbjct: 172 VLFGAKLYSTSI----DMWSAGCIFAELANAGRP 201
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 1e-12
Identities = 49/223 (21%), Positives = 77/223 (34%), Gaps = 48/223 (21%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
P F L S++ + L + + +N+ + + + ++ L ++
Sbjct: 12 IFPD--DAFAETIKANLKKKSVT-DAVTQNE-LNSIDQIIANNSDI--KSVQGIQYLPNV 65
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITG 126
+ L N L LT L L + N +
Sbjct: 66 RYLALGGNKLHD-----ISALKELT---------------------NLTYLILTGNQLQ- 98
Query: 127 SIPPEI-GKLYQLHKLDFSLNQIVGEIPIELG---NLKSLNYLVLNGNKLSGNLPRVLGS 182
S+P + KL L +L NQ+ + G L +L YL L N+L V
Sbjct: 99 SLPNGVFDKLTNLKELVLVENQLQS---LPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDK 155
Query: 183 LSELEYLDLSTNKLSGSIPE----TLGNLLKVHYLNLSNNQFR 221
L+ L LDLS N+L S+PE L L L L NQ +
Sbjct: 156 LTNLTELDLSYNQLQ-SLPEGVFDKLTQL---KDLRLYQNQLK 194
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 61.2 bits (149), Expect = 2e-10
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 13/152 (8%)
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELG---NLKSLNYLVLNGNKLSGNLPR 178
N+ S+ I L + L N++ ++ L +L YL+L GN+L
Sbjct: 50 NSDIKSVQG-IQYLPNVRYLALGGNKLH-----DISALKELTNLTYLILTGNQLQSLPNG 103
Query: 179 VLGSLSELEYLDLSTNKLSGSIPETLGNLL-KVHYLNLSNNQFRKEFPVELEKLVQLSEL 237
V L+ L+ L L N+L S+P+ + + L + YLNL++NQ + +KL L+EL
Sbjct: 104 VFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTEL 162
Query: 238 DLSHNFLGGEIPPQICN-LESLEKLNVSHNNL 268
DLS+N L +P + + L L+ L + N L
Sbjct: 163 DLSYNQL-QSLPEGVFDKLTQLKDLRLYQNQL 193
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 2e-07
Identities = 49/176 (27%), Positives = 69/176 (39%), Gaps = 32/176 (18%)
Query: 10 PSVGNFTNLKGLYLYSNSLSGSVPGEIG---NLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
+ N++ L L N L +I L LT L + NQL L +L
Sbjct: 57 QGIQYLPNVRYLALGGNKLH-----DISALKELTNLTYLILTGNQLQSLPNGVFDKLTNL 111
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNN--------FYGEIWSSWGKCQQLGTLN 118
+ L +N L VF NLT+L+++HN F K L L+
Sbjct: 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVF--------DKLTNLTELD 163
Query: 119 FSMNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIELG---NLKSLNYLVLNGN 170
S N + S+P + KL QL L NQ+ +P G L SL Y+ L+ N
Sbjct: 164 LSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQLKS-VP--DGVFDRLTSLQYIWLHDN 215
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A Length = 272 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 5e-07
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 34/179 (18%)
Query: 116 TLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175
N ++T + L + ++ + + I I+ L ++ YL L GNKL +
Sbjct: 23 KANLKKKSVT-DAVTQNE-LNSIDQIIANNSDIKSVQGIQ--YLPNVRYLALGGNKLH-D 77
Query: 176 LPRVLGSLSELEYLDLSTNKLSGSIPETL-GNLLKVHYLNLSNNQFRKEFPVELEKLVQL 234
+ L L+ L YL L+ N+L S+P + L + L L NQ L+ L
Sbjct: 78 IS-ALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQ--------LQSL--- 124
Query: 235 SELDLSHNFLGGEIPPQICN-LESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
P + + L +L LN++HN L L F+ + L+ +D+SYN+L
Sbjct: 125 --------------PDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQL 169
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 2e-12
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 51/233 (21%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKK---FHSLLLSEISVQREFLNEIKALT 456
+ +F + +G G V P+GE+VA+KK F L + R L EIK L
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFA----LRT-LREIKILK 64
Query: 457 EIRHRNIVKFYG-FCSHPRHSF----LVYECLERGSLAEILSN----DGSIKEFSW-IVR 506
+H NI+ + +F ++ E ++ L ++S D I+ F + +R
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DLHRVISTQMLSDDHIQYFIYQTLR 123
Query: 507 TNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN--- 563
A+ +H ++HRD+ N+L++S + +V DFG+A+ + +++
Sbjct: 124 ---------AVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE 171
Query: 564 -------WTEFAGTFGYVAPEL-----AYTMKVTEKCDVYSFGVLALEVIKGK 604
EF T Y APE+ Y+ + DV+S G + E+ +
Sbjct: 172 PTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAM----DVWSCGCILAELFLRR 220
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 6e-12
Identities = 54/228 (23%), Positives = 95/228 (41%), Gaps = 39/228 (17%)
Query: 399 RATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREF----LNEIK 453
AT ++ IG+G +VY+ + SG VA+K + + + E+
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR--VPNGGGGGGGLPISTVREVA 63
Query: 454 ALTEIR---HRNIVKFYGFCSHPRHS-----FLVYECLERGSLAEILSNDGSIKEFSWIV 505
L + H N+V+ C+ R LV+E +++ L L +
Sbjct: 64 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPG-----L 117
Query: 506 RTNVIKSVA----NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPG 560
IK + L ++H +C IVHRD+ +N+L++S +++DFG+A+ +
Sbjct: 118 PAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQ- 173
Query: 561 SSNWTEFAGTFGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGK 604
T T Y APE+ Y V D++S G + E+ + K
Sbjct: 174 -MALTPVVVTLWYRAPEVLLQSTYATPV----DMWSVGCIFAEMFRRK 216
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 7e-12
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 15/132 (11%)
Query: 140 KLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRV--LGSLSELEYLDLSTNKLS 197
+L + I ++ L LK+ +L L+ N + ++ L + L L L N +
Sbjct: 29 ELHGMIPPIE-KMDATLSTLKACKHLALSTNNIE----KISSLSGMENLRILSLGRNLIK 83
Query: 198 GSIPETLGNLLKVHYLNLSNNQFRKEFPVE-LEKLVQLSELDLSHNFLG--GEIPPQICN 254
I + L +S NQ + +EKLV L L +S+N + GEI +
Sbjct: 84 -KIENLDAVADTLEELWISYNQIAS---LSGIEKLVNLRVLYMSNNKITNWGEIDK-LAA 138
Query: 255 LESLEKLNVSHN 266
L+ LE L ++ N
Sbjct: 139 LDKLEDLLLAGN 150
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 60.5 bits (147), Expect = 1e-10
Identities = 29/140 (20%), Positives = 59/140 (42%), Gaps = 12/140 (8%)
Query: 154 IELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYL 213
+ + + L + + L +L ++L LSTN + I +L + + L
Sbjct: 20 VVATEAEKVE-LHGMIPPIE-KMDATLSTLKACKHLALSTNNIE-KI-SSLSGMENLRIL 75
Query: 214 NLSNNQFRKEFPVE-LEKLVQ-LSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGL 271
+L N +K +E L+ + L EL +S+N + + I L +L L +S+N ++
Sbjct: 76 SLGRNLIKK---IENLDAVADTLEELWISYNQIA-SLSG-IEKLVNLRVLYMSNNKITNW 130
Query: 272 IP-SCFEGMHGLSCIDISYN 290
+ L + ++ N
Sbjct: 131 GEIDKLAALDKLEDLLLAGN 150
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 2e-07
Identities = 40/194 (20%), Positives = 59/194 (30%), Gaps = 64/194 (32%)
Query: 8 IPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLN 67
+ ++ K L L +N++ +I +L + NL I
Sbjct: 40 MDATLSTLKACKHLALSTNNIE-----KISSLSGMENLRI-------------------- 74
Query: 68 RVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGS 127
L + N +I + L L S N I S
Sbjct: 75 -------------------------LSLGRNLIK-KIENLDAVADTLEELWISYNQIA-S 107
Query: 128 IPPEIGKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYLVLNGNKLSGNL---------- 176
+ I KL L L S N+I I+ L L L L+L GN L +
Sbjct: 108 LSG-IEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYR 166
Query: 177 PRVLGSLSELEYLD 190
V+ L L+ LD
Sbjct: 167 IEVVKRLPNLKKLD 180
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A Length = 198 | Back alignment and structure |
|---|
Score = 49.7 bits (119), Expect = 6e-07
Identities = 39/154 (25%), Positives = 59/154 (38%), Gaps = 16/154 (10%)
Query: 58 RSLRNLASLNRVHLEQNHLTGNISEVFGI------YPNLTFLDISHNNFYGEIWSSWGKC 111
R S+ E+ L G I + + L +S NN +I SS
Sbjct: 12 RIFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNI-EKI-SSLSGM 69
Query: 112 QQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYLVLNGN 170
+ L L+ N I I L +L S NQI + + L +L L ++ N
Sbjct: 70 ENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS---LSGIEKLVNLRVLYMSNN 125
Query: 171 KLSGNLPRV--LGSLSELEYLDLSTNKLSGSIPE 202
K++ N + L +L +LE L L+ N L E
Sbjct: 126 KIT-NWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 7e-12
Identities = 51/235 (21%), Positives = 92/235 (39%), Gaps = 53/235 (22%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKK--FHSLLLSEISVQREFLNEIKALTE 457
+ + +G GG V+ + + VA+KK SV+ L EIK +
Sbjct: 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDP----QSVKHA-LREIKIIRR 64
Query: 458 IRHRNIVKFY----------GFCSHPRHSF----LVYECLE----RGSLAEILSNDGSIK 499
+ H NIVK + +V E +E L + +
Sbjct: 65 LDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEE-HAR 123
Query: 500 EFSW-IVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFGIAKFL 557
F + ++R L Y+H ++HRD+ N+ +++E ++ DFG+A+ +
Sbjct: 124 LFMYQLLR---------GLKYIHS---ANVLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
Query: 558 KPGSSN---WTEFAGTFGYVAPEL-----AYTMKVTEKCDVYSFGVLALEVIKGK 604
P S+ +E T Y +P L YT + D+++ G + E++ GK
Sbjct: 172 DPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAI----DMWAAGCIFAEMLTGK 222
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 68.0 bits (165), Expect = 7e-12
Identities = 93/634 (14%), Positives = 189/634 (29%), Gaps = 190/634 (29%)
Query: 35 EIGNLMQLTNLEI--DNNQLF------GQIPRSLRNLASLNRVH--LEQNHLTGNISEVF 84
E G Q +I F + +++ S + + +F
Sbjct: 10 ETGE-HQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLF 68
Query: 85 GI---YPNLT---FLDISHNNFYGEIWSSWGK-CQQ--LGTLNFS--MNNITGSIPPEIG 133
F++ Y + S +Q + T + + +
Sbjct: 69 WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV--- 125
Query: 134 KLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNG----NK--LSGNLPRVLGSLSELE 187
K + S Q ++ L L+ ++++G K ++ ++ +++
Sbjct: 126 ----FAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMD 181
Query: 188 ----YLDLSTNKLSGSIPETLGNL---LKVHYLNLSNNQFRKEFPVELEKLVQLSELDLS 240
+L+L ++ E L L + ++ + S++ + + + +L L S
Sbjct: 182 FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA-ELRRLLKS 240
Query: 241 HNFLGGEIPPQ-------ICNLESLEKLNVS------------HNNLSGLIPSCFEGMH- 280
+ + N ++ N+S + LS + H
Sbjct: 241 KPY------ENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHH 294
Query: 281 --GLSCIDISYNELLGLIPNSTGFQYD--PIQALRGN---RGLCGDVEGFQSCKAFVSQ- 332
L+ +E+ L+ + P + L N + + S + ++
Sbjct: 295 SMTLT-----PDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAE-----SIRDGLATW 344
Query: 333 ---KHVFENKWFLII---IPIL------GVFALLFFVIGIIFGR-TKRTSKENKGSCENH 379
KHV +K II + +L +F L +F +
Sbjct: 345 DNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS-----VFPPSAHIPTI--------- 390
Query: 380 RGLLSILTFEGKIVYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLL 439
LLS++ F+ ++ +++ + + S S+ L
Sbjct: 391 --LLSLIWFD--VIKSDVMVVVNKLHKYSLVEKQPKESTIS-------------IPSIYL 433
Query: 440 SEISVQREFLNEIKALTEIRHRNIVKFY----GFCSH----PR-----HSFLVY-----E 481
E+ V+ E AL HR+IV Y F S P +S + + E
Sbjct: 434 -ELKVKLE---NEYAL----HRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIE 485
Query: 482 CLERGSLAEILSNDGSIKEFSWI---VR-----TNVIKSVANALS----YMHHDCFPPIV 529
ER +L ++ D F ++ +R N S+ N L Y + I
Sbjct: 486 HPERMTLFRMVFLD-----FRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPY-----IC 535
Query: 530 HRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN 563
D +YE V+ I FL N
Sbjct: 536 DND---------PKYERLVNA--ILDFLPKIEEN 558
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.8 bits (149), Expect = 6e-10
Identities = 72/488 (14%), Positives = 132/488 (27%), Gaps = 148/488 (30%)
Query: 33 PGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPN-LT 91
P + L L L + + N+ R+H Q L + Y N L
Sbjct: 195 PETV--LEMLQKLLYQIDPNWTSRSDHSSNIKL--RIHSIQAELRRLLKS--KPYENCLL 248
Query: 92 FLDISHNNFYGEIWSSW------GKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLD--- 142
L + ++ C+ L T F +T + L
Sbjct: 249 VLL--------NVQNAKAWNAFNLSCKILLTTRFK--QVTDFLSAATTTHISLDHHSMTL 298
Query: 143 --------FS--LNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSEL------ 186
L+ ++P E VL N PR L ++E
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPRE----------VLTTN------PRRLSIIAESIRDGLA 342
Query: 187 ---EYLDLSTNKLSGSIPETLGNL----LKVHYLNLSNNQFRKEFPVELEKLVQL-SELD 238
+ ++ +KL+ I +L L + + LS F + L + ++
Sbjct: 343 TWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS--VFPPSAHIPTILLSLIWFDVI 400
Query: 239 LSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPN 298
+ N + + V I + + Y EL + N
Sbjct: 401 -------KSDVMVVVN-KLHKYSLVEKQPKESTI-----SIPSI------YLELKVKLEN 441
Query: 299 STGF------QYDPIQALRGNRGLCGDVE--------GFQSCKAFVSQKHVFENKWFLII 344
Y+ + + L G ++ FL
Sbjct: 442 EYALHRSIVDHYNIPKTFDSD-DLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLD- 499
Query: 345 IPILGVFALLFFVIGIIFGRTKRTSKENKGSCENHRGLLSILTFEGKIV-----YEEIIR 399
F+ I R T+ GS N L + ++ I YE ++
Sbjct: 500 ---------FRFLEQKI--RHDSTAWNASGSILNT--LQQLKFYKPYICDNDPKYERLVN 546
Query: 400 ATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEIS--VQREFLNEIKALTE 457
A +F LP E +L+ S+ + ++ + E +A+ E
Sbjct: 547 AILDF------------------LPKIE-------ENLICSKYTDLLRIALMAEDEAIFE 581
Query: 458 IRHRNIVK 465
H+ + +
Sbjct: 582 EAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.9 bits (144), Expect = 2e-09
Identities = 53/360 (14%), Positives = 111/360 (30%), Gaps = 98/360 (27%)
Query: 380 RGLLSILTFEGKIVYEEIIRAT--KNFD------AEQCIGIGGQASVY---RGELPSGEV 428
L L + + + ++ + N+ + +Y R L +
Sbjct: 65 LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRL-YNDN 123
Query: 429 VAVKKFHSLLLSEISVQR-EFLNEIK-ALTEIRHRNIVKFYGF------------CS--- 471
K++ V R + +++ AL E+R V G C
Sbjct: 124 QVFAKYN--------VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYK 175
Query: 472 -HPRHSFLVY-----ECLERGSLAEILSN-----DGSIKE-----FSWIVRTNVIKSVAN 515
+ F ++ C ++ E+L D + + +R + I++
Sbjct: 176 VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELR 235
Query: 516 AL--SYMHHDCFPPIVHRDISSKNV----------LLSSEYEARVSDFGIAKFLKPGSSN 563
L S + +C +V ++ + LL++ + +V+DF A S +
Sbjct: 236 RLLKSKPYENCL--LVLLNVQNAKAWNAFNLSCKILLTTRF-KQVTDFLSAATTTHISLD 292
Query: 564 WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLS 623
+ T + K L EV+ +PR +S+++ S + +
Sbjct: 293 --HHSMTL-----TPDEVKSLLLKYLDCRPQDLPREVLTT-NPR-RLSIIAESIRDGLAT 343
Query: 624 LNEILDPRLPLPSRNIQDKLISILEVALLCLEES------------PESRP-TMQTVCQL 670
+ DKL +I+E +L LE + P S + +
Sbjct: 344 WDNWKHVNC--------DKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLI 395
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.8 bits (110), Expect = 2e-05
Identities = 86/639 (13%), Positives = 183/639 (28%), Gaps = 195/639 (30%)
Query: 139 HKLDFSLNQIVGEIPIELGNLKSLNYLV------LNGNKLSGNLPRVLGSLSELEYLDLS 192
H +DF + + L+ + + +L E++++ +S
Sbjct: 5 HHMDFETGE------HQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSK-EEIDHIIMS 57
Query: 193 TNKLSGS--------------IPETLGNLLKVHYLNLSNNQFRKEF--PVELEKLVQLSE 236
+ +SG+ + + + +L+++Y L + + E P + + + +
Sbjct: 58 KDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLM-SPIKTEQRQP-SMMTRMYIEQ 115
Query: 237 LDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPS---CFEGMHG--------LSCI 285
D +N ++ + N+ L+ L L P+ +G+ G C+
Sbjct: 116 RDRLYN--DNQVFAKY-NVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCL 172
Query: 286 DISYNELLGLIPN-----STGFQYDPIQALRGNRGLCGDVEGFQSCKAFVSQ-------- 332
++ + + P L + L ++ + ++ S
Sbjct: 173 S---YKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229
Query: 333 -----KHVFENKWF---LIII------PILGVFALLFFVIGIIFGRTKRTSKENKGSCEN 378
+ + ++K + L+++ F L SC
Sbjct: 230 IQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL---------------------SC-- 266
Query: 379 HRGLL-----SILTFEGKIVYEEI--IRATKNFDAEQ-------CIGIGGQASVYRGELP 424
+ LL + F I + ++ + Q +LP
Sbjct: 267 -KILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ------DLP 319
Query: 425 SGEVVAVKKFHSLLLSEIS-VQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECL 483
V + LS I+ R+ L +H N K + S L L
Sbjct: 320 R----EVLTTNPRRLSIIAESIRDGLATWD---NWKHVNCDKL----TTIIESSL--NVL 366
Query: 484 E----RG---SLAEILSNDGSIKE--FS--W----------IVRTNVIKSVAN----ALS 518
E R L+ + I S W +V S+ +
Sbjct: 367 EPAEYRKMFDRLS-VFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKEST 425
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA--GTFGYVAP 576
++ ++ K E E + + + P + + + Y
Sbjct: 426 ISIPS-----IYLELKVKL-----ENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS 475
Query: 577 ELAYTMKV---TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLS---------- 623
+ + +K E+ ++ L ++ K D + +S S L
Sbjct: 476 HIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYIC 535
Query: 624 ---------LNEILDPRLPLPSRN-IQDKLISILEVALL 652
+N ILD LP N I K +L +AL+
Sbjct: 536 DNDPKYERLVNAILD-FLPKIEENLICSKYTDLLRIALM 573
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 4e-05
Identities = 38/252 (15%), Positives = 79/252 (31%), Gaps = 49/252 (19%)
Query: 447 EFLNEIKALTEIRHRNIVKFYGFCSHP-RHSFLVYECLER--GSLAEILSNDGSIKEFSW 503
+ I + EI H I+ + ++ L + + + + +
Sbjct: 40 DMPKSILSKEEIDH--IIM----SKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKF 93
Query: 504 I---VRTNVIKSVANALSY------MHHD--CFPPI-VHRD---ISSKNVLLSSEYEARV 548
+ ++T + Y +++D F V R + + LL V
Sbjct: 94 LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNV 153
Query: 549 SDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD 608
G+ GS VA ++ + KV K F + L + P
Sbjct: 154 LIDGVL-----GSGKTW--------VALDVCLSYKVQCK---MDFKIFWLNLKNCNSPET 197
Query: 609 FISLLSSSSSNMNLSLNEILDP--RLPLPSRNIQDKLISILEV-----ALLCLEE--SPE 659
+ +L ++ + D + L +IQ +L +L+ LL L + +
Sbjct: 198 VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAK 257
Query: 660 SRPTMQTVCQLL 671
+ C++L
Sbjct: 258 AWNAFNLSCKIL 269
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 64.7 bits (158), Expect = 9e-12
Identities = 48/178 (26%), Positives = 77/178 (43%), Gaps = 20/178 (11%)
Query: 127 SIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPR-VLGSLSE 185
S+P I + KLD + L L +L L+ N+L L V L+E
Sbjct: 28 SVPSGIPADTE--KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ-TLSAGVFDDLTE 84
Query: 186 LEYLDLSTNKLSGSIPETL-GNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFL 244
L L L+ N+L+ S+P + +L ++ L L NQ + ++L +L EL L+ N L
Sbjct: 85 LGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQL 143
Query: 245 GGEIPPQICN-LESLEKLNVSHNNLSGLIPSCFEGMHGL------------SCIDISY 289
IP + L +L+ L++S N L + F+ + L S +I Y
Sbjct: 144 -QSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCEILY 200
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 60.9 bits (148), Expect = 2e-10
Identities = 56/220 (25%), Positives = 83/220 (37%), Gaps = 62/220 (28%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
++P G + + L L S L+ L +LT L +D NQL +
Sbjct: 28 SVPS--GIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQL-QTLSA-------- 76
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITG 126
G++ +LT +LGTL + N +
Sbjct: 77 ------------------GVFDDLT---------------------ELGTLGLANNQLA- 96
Query: 127 SIPPEI-GKLYQLHKLDFSLNQIVGEIPIELG---NLKSLNYLVLNGNKLSGNLPR-VLG 181
S+P + L QL KL NQ+ + G L L L LN N+L ++P
Sbjct: 97 SLPLGVFDHLTQLDKLYLGGNQLKS---LPSGVFDRLTKLKELRLNTNQLQ-SIPAGAFD 152
Query: 182 SLSELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQF 220
L+ L+ L LSTN+L S+P L K+ + L NQF
Sbjct: 153 KLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQF 191
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 4e-07
Identities = 43/170 (25%), Positives = 57/170 (33%), Gaps = 26/170 (15%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
L+ + T L L L N L G +L +L L + NNQL
Sbjct: 45 TGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFD 104
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
+L L++++L N L S VF L L ++ N QL
Sbjct: 105 HLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTN--------------QL------- 143
Query: 122 NNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGN 170
SIP KL L L S NQ+ L L + L GN
Sbjct: 144 ----QSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A Length = 251 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 3e-04
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 187 EYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGG 246
E LDL + L+ T L K+ +LNL NQ + + L +L L L++N L
Sbjct: 38 EKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA- 96
Query: 247 EIPPQI-CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
+P + +L L+KL + N L L F+ + L + ++ N+L
Sbjct: 97 SLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQL 143
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 62.8 bits (153), Expect = 3e-11
Identities = 48/165 (29%), Positives = 66/165 (40%), Gaps = 19/165 (11%)
Query: 127 SIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSEL 186
S+P I Q L NQI P +L +L L L N+L V SL++L
Sbjct: 33 SVPAGIPTNAQ--ILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQL 90
Query: 187 EYLDLSTNKLSGSIPETL-GNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLG 245
LDL TN+L+ +P + L+ + L + N+ E P +E+L L+ L L N L
Sbjct: 91 TVLDLGTNQLT-VLPSAVFDRLVHLKELFMCCNKL-TELPRGIERLTHLTHLALDQNQLK 148
Query: 246 GEIPPQICNLESLEKLNVSHNNLSGLIP-SCFEGMHGLSCIDISY 289
L SL + N P C C DI Y
Sbjct: 149 SIPHGAFDRLSSLTHAYL-FGN-----PWDC-------ECRDIMY 180
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 5e-10
Identities = 44/169 (26%), Positives = 62/169 (36%), Gaps = 37/169 (21%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQ-----IPRSLR 61
++P G TN + LYL+ N ++ PG +L+ L L + +NQL + SL
Sbjct: 33 SVPA--GIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL--GALPVGVFDSLT 88
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
L L L N LT S VF +L L + N +L
Sbjct: 89 QLTVL---DLGTNQLTVLPSAVFDRLVHLKELFMCCN--------------KL------- 124
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGN 170
+P I +L L L NQ+ L SL + L GN
Sbjct: 125 ----TELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGN 169
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} Length = 229 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 2e-06
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Query: 2 NHLSGAIPPSV-GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
N L A+P V + T L L L +N L+ L+ L L + N+L ++PR +
Sbjct: 74 NQLG-ALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKL-TELPRGI 131
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNN 99
L L + L+QN L F +LT + N
Sbjct: 132 ERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYL-FGN 169
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 64.2 bits (155), Expect = 4e-11
Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 21/162 (12%)
Query: 126 GSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGS--L 183
+ P + + L+ L + NLKSL + L ++ + L
Sbjct: 162 VDLSPVLDAMPLLNNLKIKGTNNLSIGKKPRPNLKSLE---IISGGLPDSVVEDILGSDL 218
Query: 184 SELEYLDL---STNKLSGSIPETLGNLL------KVHYLNLSNNQFRKEFPVEL---EKL 231
LE L L + L + +L + + + + + L
Sbjct: 219 PNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDIL 278
Query: 232 VQLSELDLSHNFLGGE----IPPQICNLESLEKLNVSHNNLS 269
QL +D+S L E + + ++ L+ +N+ +N LS
Sbjct: 279 PQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 53.4 bits (127), Expect = 1e-07
Identities = 29/184 (15%), Positives = 58/184 (31%), Gaps = 37/184 (20%)
Query: 78 GNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIG--KL 135
++S V P L L I N + L +L + S+ +I L
Sbjct: 162 VDLSPVLDAMPLLNNLKIKGTN---NLSIGKKPRPNLKSLEIISGGLPDSVVEDILGSDL 218
Query: 136 YQLHKLDFSL--NQIVGEIPIEL-------GNLKSLNYLVLNGNKLSGNLPRVLGS---L 183
L KL + + + + +L +L + + + + L
Sbjct: 219 PNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDIL 278
Query: 184 SELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNF 243
+LE +D+S L+ L + + K+ L +++ +N+
Sbjct: 279 PQLETMDISAGVLTDEGARLLLDHVD--------------------KIKHLKFINMKYNY 318
Query: 244 LGGE 247
L E
Sbjct: 319 LSDE 322
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} Length = 362 | Back alignment and structure |
|---|
Score = 53.0 bits (126), Expect = 2e-07
Identities = 38/261 (14%), Positives = 85/261 (32%), Gaps = 45/261 (17%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLY---------SNSLSGSVPGEIGNLMQLTNLEIDNNQL 52
+ ++ I + F + +GL+ S + + + L NL+I
Sbjct: 125 SDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNN 184
Query: 53 FGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGI--YPNLTFLDISHNNFYGEIWSSWGK 110
+ NL SL + L ++ E PNL L +
Sbjct: 185 LSIGKKPRPNLKSLE---IISGGLPDSVVEDILGSDLPNLEKLVLY-------------- 227
Query: 111 CQQLGTLNFSMNNITGSIPP--EIGKLYQLHKLDFSLNQIVGEIPIELGN---LKSLNYL 165
+G ++ + P + L L + + L L +
Sbjct: 228 ---VGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETM 284
Query: 166 VLNGNKLSGN----LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFR 221
++ L+ L + + L+++++ N LS + + L L + +++S++Q
Sbjct: 285 DISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSLPMK-IDVSDSQ-- 341
Query: 222 KEFPVELEKLVQLSELDLSHN 242
+ ++EL+ H+
Sbjct: 342 --EYDDDYSYPMITELEHHHH 360
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 65.3 bits (159), Expect = 4e-11
Identities = 54/220 (24%), Positives = 87/220 (39%), Gaps = 33/220 (15%)
Query: 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQRE----FLNEIKALT 456
+F + IG GG VY +G++ A+K L + ++ LNE L+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKC----LDKKRIKMKQGETLALNERIMLS 244
Query: 457 EI---RHRNIVK-FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNV-IK 511
+ IV Y F + P + + + G L LS G E
Sbjct: 245 LVSTGDCPFIVCMSYAFHT-PDKLSFILDLMNGGDLHYHLSQHGVFSE----ADMRFYAA 299
Query: 512 SVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF 571
+ L +MH+ +V+RD+ N+LL R+SD G+A + GT
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH--ASVGTH 354
Query: 572 GYVAPEL-----AYTMKVTEKCDVYSFGVLALEVIKGKHP 606
GY+APE+ AY D +S G + ++++G P
Sbjct: 355 GYMAPEVLQKGVAYDSSA----DWFSLGCMLFKLLRGHSP 390
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 5e-11
Identities = 50/195 (25%), Positives = 79/195 (40%), Gaps = 23/195 (11%)
Query: 425 SGEVVAVK---KFHSLLLSEISVQREFLNEIKALTEIRHRNIVK-FYGFCSHPRHSFLVY 480
+G+V A+K K+ L E+S F E L R I + + F + +LV
Sbjct: 85 TGQVYAMKIMNKWDMLKRGEVS---CFREERDVLVNGDRRWITQLHFAFQD-ENYLYLVM 140
Query: 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH-HDCFPPIVHRDISSKNVL 539
E G L +LS G + + + A+ +H VHRDI N+L
Sbjct: 141 EYYVGGDLLTLLSKFGER--IPAEMARFYLAEIVMAIDSVHRLG----YVHRDIKPDNIL 194
Query: 540 LSSEYEARVSDFGIAKFLKPGSSNWTE-FAGTFGYVAPELAYTMKVTEK-------CDVY 591
L R++DFG L+ + + GT Y++PE+ + CD +
Sbjct: 195 LDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWW 254
Query: 592 SFGVLALEVIKGKHP 606
+ GV A E+ G+ P
Sbjct: 255 ALGVFAYEMFYGQTP 269
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 5e-11
Identities = 57/220 (25%), Positives = 97/220 (44%), Gaps = 31/220 (14%)
Query: 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQRE----FLNEIKALT 456
F + +G GG V+ ++ +G++ A KK L + +R+ + E K L
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKK----LNKKRLKKRKGYQGAMVEKKILA 240
Query: 457 EIRHRNIVK-FYGFCSHPRHSFLVYECLERGSL----AEILSNDGSIKEFSWIVRTNV-I 510
++ R IV Y F + LV + G + + ++ +E R
Sbjct: 241 KVHSRFIVSLAYAFET-KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQE----PRAIFYT 295
Query: 511 KSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGT 570
+ + L ++H I++RD+ +NVLL + R+SD G+A LK G + +AGT
Sbjct: 296 AQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGT 352
Query: 571 FGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGKHP 606
G++APEL Y V D ++ GV E+I + P
Sbjct: 353 PGFMAPELLLGEEYDFSV----DYFALGVTLYEMIAARGP 388
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 6e-11
Identities = 51/217 (23%), Positives = 86/217 (39%), Gaps = 34/217 (15%)
Query: 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREF---LNEIKALTEI 458
FD + +G G V + SG A+K L ++ ++ LNE + L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMK---ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 459 RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIK----SVA 514
+VK + ++V E + G + L G E + +
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSE-------PHARFYAAQIV 151
Query: 515 NALSYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGY 573
Y+H D +++RD+ +N+L+ + +V+DFG AK + WT GT
Sbjct: 152 LTFEYLHSLD----LIYRDLKPENLLIDQQGYIQVTDFGFAK--RVKGRTWT-LCGTPEA 204
Query: 574 VAPEL----AYTMKVTEKCDVYSFGVLALEVIKGKHP 606
+APE+ Y V D ++ GVL E+ G P
Sbjct: 205 LAPEIILSKGYNKAV----DWWALGVLIYEMAAGYPP 237
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 7e-11
Identities = 55/251 (21%), Positives = 93/251 (37%), Gaps = 64/251 (25%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLN-EIKALTEI 458
+K + + +G G V ++ SG+ A+KK + + N E+ + +
Sbjct: 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKK--------VLQDPRYKNRELDIMKVL 57
Query: 459 RHRNIVK-FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRT---------- 507
H NI+K F + + + + +N + S IV
Sbjct: 58 DHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIM 117
Query: 508 --------NVIKSVAN-------------------ALSYMHHDCFPPIVHRDISSKNVLL 540
V+KS A+ ++H I HRDI +N+L+
Sbjct: 118 EYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS---LGICHRDIKPQNLLV 174
Query: 541 SSE-YEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPEL-----AYTMKVTEKCDVYSFG 594
+S+ ++ DFG AK L P + + + Y APEL YT + D++S G
Sbjct: 175 NSKDNTLKLCDFGSAKKLIPSEPS-VAYICSRFYRAPELMLGATEYTPSI----DLWSIG 229
Query: 595 -VLALEVIKGK 604
V E+I GK
Sbjct: 230 CVFG-ELILGK 239
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 7e-11
Identities = 53/250 (21%), Positives = 99/250 (39%), Gaps = 37/250 (14%)
Query: 425 SGEVVAVK---KFHSLLLSEISVQREFLNEIKALTEIRHRNIVK-FYGFCSHPRHSFLVY 480
+ +V A+K KF + S+ + F E + +V+ FY F R+ ++V
Sbjct: 93 TRKVYAMKLLSKFEMIKRSDSA---FFWEERDIMAFANSPWVVQLFYAFQD-DRYLYMVM 148
Query: 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH-HDCFPPIVHRDISSKNVL 539
E + G L ++SN + V AL +H +HRD+ N+L
Sbjct: 149 EYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSMG----FIHRDVKPDNML 200
Query: 540 LSSEYEARVSDFGIAKFLKPGSSNWTE-FAGTFGYVAPEL----AYTMKVTEKCDVYSFG 594
L +++DFG + + GT Y++PE+ +CD +S G
Sbjct: 201 LDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG 260
Query: 595 VLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP---SRNIQDKLISILEVAL 651
V E++ G P F + ++ + ++I++ + L +I + +++ A
Sbjct: 261 VFLYEMLVGDTP--F------YADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLIC-AF 311
Query: 652 LCLEESPESR 661
L E R
Sbjct: 312 LT---DREVR 318
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 1e-10
Identities = 52/252 (20%), Positives = 93/252 (36%), Gaps = 39/252 (15%)
Query: 80 ISEVFGIYPNLTFLDISHNNFYGEIWSSWGKC-----QQLGTLNFSMNNITGSIPPEIGK 134
+ E I +T LD+S NN Y + + +LN S N++ E+ +
Sbjct: 14 VEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQ 73
Query: 135 L-----YQLHKLDFSLNQIVGEIPIELGNL-----KSLNYLVLNGNKLSGN----LPRVL 180
+ + L+ S N + + EL ++ L L N S +
Sbjct: 74 ILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAF 133
Query: 181 GSL-SELEYLDLSTNKLSGSIPETLGNLLK-----VHYLNLSNNQFRKEFPVELEKLV-- 232
+L + + L+L N L + L +L V+ LNL N + EL K +
Sbjct: 134 SNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLAS 193
Query: 233 ---QLSELDLSHNFLGGEIPPQIC-----NLESLEKLNVSHNNLSG----LIPSCFEGMH 280
++ LDLS N LG + ++ + LN+ N L G + + +
Sbjct: 194 IPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLK 253
Query: 281 GLSCIDISYNEL 292
L + + Y+ +
Sbjct: 254 HLQTVYLDYDIV 265
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 1e-09
Identities = 49/300 (16%), Positives = 102/300 (34%), Gaps = 48/300 (16%)
Query: 16 TNLKGLYLYSNSLSGSVPGEIG-----NLMQLTNLEIDNNQL----FGQIPRSLR-NLAS 65
+ L L N+L E+ +T+L + N L ++ + L A+
Sbjct: 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81
Query: 66 LNRVHLEQNHLTGN----ISEVFGIYP-NLTFLDISHNNFYGEIWSSWGK-----CQQLG 115
+ ++L N L+ + + P +T LD+ N+F + S + + +
Sbjct: 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASIT 141
Query: 116 TLNFSMNNITGSIPPEIGKL-----YQLHKLDFSLNQIVGEIPIELGNL-----KSLNYL 165
+LN N++ E+ ++ ++ L+ N + + EL S+ L
Sbjct: 142 SLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSL 201
Query: 166 VLNGNKLSGNLPRVLGSL-----SELEYLDLSTNKLSGSIPETLGNLLKVH----YLNLS 216
L+ N L L + + + L+L N L G E L L + L
Sbjct: 202 DLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLD 261
Query: 217 NNQFRKEFPVELEKLVQ-------LSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLS 269
+ + + + L + +D + + I + +L+ + S
Sbjct: 262 YDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPIS--NLIRELSGKADVPS 319
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 55.9 bits (135), Expect = 2e-08
Identities = 45/284 (15%), Positives = 97/284 (34%), Gaps = 58/284 (20%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQ-----LTNLEIDNNQL-----------FGQIP 57
N+ L L N LS E+ + +T L++ N F +P
Sbjct: 78 IPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLP 137
Query: 58 RSLRNLASLNRVHLEQNHLTGN----ISEVFGIYP-NLTFLDISHNNFYGE----IWSS- 107
S+ +L +L N L + ++ P N+ L++ NN + +
Sbjct: 138 ASITSL------NLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFL 191
Query: 108 WGKCQQLGTLNFSMNNITGSIPPEIGKLYQ-----LHKLDFSLNQI----VGEIPIELGN 158
+ +L+ S N + E+ ++ + L+ LN + + + + +
Sbjct: 192 ASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDS 251
Query: 159 LKSLNYLVLNGNKLSG-------NLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLK-- 209
LK L + L+ + + L ++ ++ +D + ++ S + NL++
Sbjct: 252 LKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPISNLIREL 311
Query: 210 ---VHYLNLSNN-----QFRKEFPVELEKLVQLSELDLSHNFLG 245
+L N Q + +L +L E + L
Sbjct: 312 SGKADVPSLLNQCLIFAQKHQTNIEDLNIPDELRESIQTCKPLL 355
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} Length = 362 | Back alignment and structure |
|---|
Score = 53.9 bits (130), Expect = 8e-08
Identities = 48/306 (15%), Positives = 99/306 (32%), Gaps = 51/306 (16%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQ-----LTNLEIDNNQLFGQ----IPRSLRNL- 63
++ L L NSL E+ ++ +T+L + N L + + ++L +
Sbjct: 49 TPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIP 108
Query: 64 ASLNRVHLEQNHLTGN----ISEVFGIYP-NLTFLDISHNNFYGEIWSSWGKC-----QQ 113
++ + L N + + F P ++T L++ N+ + +
Sbjct: 109 FTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPAN 168
Query: 114 LGTLNFSMNNITGSIPPEIGKL-----YQLHKLDFSLNQIVGEIPIELG-----NLKSLN 163
+ +LN NN+ E+ K + LD S N + + EL +
Sbjct: 169 VNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVV 228
Query: 164 YLVLNGNKLSG----NLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVH-------Y 212
L L N L G NL + SL L+ + L + + E L
Sbjct: 229 SLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIIL 288
Query: 213 LNLSNNQFRKEFPVELEKLVQ-----LSELDLSHNFL-----GGEIPPQICNLESLEKLN 262
++ + + + + L++ L + L + + L +
Sbjct: 289 VDKNGKEIHPSHSIPISNLIRELSGKADVPSLLNQCLIFAQKHQTNIEDLNIPDELRESI 348
Query: 263 VSHNNL 268
+ L
Sbjct: 349 QTCKPL 354
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 62.4 bits (151), Expect = 1e-10
Identities = 22/112 (19%), Positives = 34/112 (30%), Gaps = 3/112 (2%)
Query: 111 CQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYLVLNG 169
L + + + L +L Q + + + L L L L +
Sbjct: 7 PHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVK 65
Query: 170 NKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFR 221
+ L P L L+LS N L S+ L + L LS N
Sbjct: 66 SGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLH 116
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 57.4 bits (138), Expect = 5e-09
Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 2/95 (2%)
Query: 151 EIPIELGNLKSLNYLVLNGNKLSGNLPR-VLGSLSELEYLDLSTNKLSGSIPETLGNLLK 209
+ L ++L L + + +L L L EL L + + L P+ +
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPR 81
Query: 210 VHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFL 244
+ LNLS N + + + L EL LS N L
Sbjct: 82 LSRLNLSFNALES-LSWKTVQGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 55.5 bits (133), Expect = 2e-08
Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 5/96 (5%)
Query: 225 PVELEKLVQLSELDLSHNFLGGEIPPQ-ICNLESLEKLNVSHNNLSGLIPSCFEGMHGLS 283
L L+EL + + + + + L L L + + L + P F LS
Sbjct: 24 LHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLS 83
Query: 284 CIDISYNELLGLIPNSTGFQYDPIQ--ALRGNRGLC 317
+++S+N L L + Q +Q L GN C
Sbjct: 84 RLNLSFNALESLSWKT--VQGLSLQELVLSGNPLHC 117
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 55.1 bits (132), Expect = 3e-08
Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 2/95 (2%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVP-GEIGNLMQLTNLEIDNNQLFGQIPRSLRNLAS 65
+ NL LY+ + + ++ L +L NL I + L P +
Sbjct: 22 DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPR 81
Query: 66 LNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNF 100
L+R++L N L + +L L +S N
Sbjct: 82 LSRLNLSFNALESLSWKTV-QGLSLQELVLSGNPL 115
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 Length = 347 | Back alignment and structure |
|---|
Score = 50.5 bits (120), Expect = 8e-07
Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Query: 25 SNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPR-SLRNLASLNRVHLEQNHLTGNISEV 83
+ + + LT L I+N Q + LR L L + + ++ L +
Sbjct: 16 TRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDA 75
Query: 84 FGIYPNLTFLDISHNNF 100
F P L+ L++S N
Sbjct: 76 FHFTPRLSRLNLSFNAL 92
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 2e-10
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 9/108 (8%)
Query: 117 LNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELG---NLKSLNYLVLNGNKLS 173
L N T +P E+ L +D S N+I + N+ L L+L+ N+L
Sbjct: 36 LYLDGNQFT-LVPKELSNYKHLTLIDLSNNRIST---LSNQSFSNMTQLLTLILSYNRLR 91
Query: 174 GNLPRVLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQF 220
PR L L L L N +S +PE +L + +L + N
Sbjct: 92 CIPPRTFDGLKSLRLLSLHGNDIS-VVPEGAFNDLSALSHLAIGANPL 138
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 54.2 bits (131), Expect = 1e-08
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 127 SIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSEL 186
+P I + +L NQ +P EL N K L + L+ N++S + ++++L
Sbjct: 24 VLPKGIPRDVT--ELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQL 80
Query: 187 EYLDLSTNKLSGSIPE----TLGNLLKVHYLNLSNNQ 219
L LS N+L IP L +L L+L N
Sbjct: 81 LTLILSYNRLR-CIPPRTFDGLKSL---RLLSLHGND 113
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 1e-04
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 200 IPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQIC-NLESL 258
IP V L L NQF P EL L+ +DLS+N + + Q N+ L
Sbjct: 29 IPRD------VTELYLDGNQFTLV-PKELSNYKHLTLIDLSNNRIS-TLSNQSFSNMTQL 80
Query: 259 EKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
L +S+N L + P F+G+ L + + N++
Sbjct: 81 LTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDI 114
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} Length = 193 | Back alignment and structure |
|---|
Score = 42.3 bits (100), Expect = 2e-04
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N + +P + N+ +L + L +N +S N+ QL L + N+L PR+
Sbjct: 41 NQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFD 99
Query: 62 NLASLNRVHLEQNHL 76
L SL + L N +
Sbjct: 100 GLKSLRLLSLHGNDI 114
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 2e-10
Identities = 38/147 (25%), Positives = 58/147 (39%), Gaps = 13/147 (8%)
Query: 49 NNQLFGQIPRSLRNLASLNRVHLEQNHLT-GNISEVFGIYPNLTFLDISHNNFYGEIWSS 107
+ +L + P ++R L L+ G I + + NL FL + + S+
Sbjct: 15 HLELRNRTPAAVREL------VLDNCKSNDGKIEGLTAEFVNLEFLSLINVGL--ISVSN 66
Query: 108 WGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYLV 166
K +L L S N I G + KL L L+ S N++ +E L L+ L L
Sbjct: 67 LPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLD 126
Query: 167 LNGN---KLSGNLPRVLGSLSELEYLD 190
L L+ V L +L YLD
Sbjct: 127 LFNCEVTNLNDYRESVFKLLPQLTYLD 153
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 52.4 bits (126), Expect = 4e-08
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Query: 182 SLSELEYLDLSTNKLS-GSIPETLGNLLKVHYLNLSNNQFRKEFPVE-LEKLVQLSELDL 239
+ + + L L K + G I + + +L+L N V L KL +L +L+L
Sbjct: 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLIS---VSNLPKLPKLKKLEL 78
Query: 240 SHNFLGGEIPPQICNLESLEKLNVSHNNLSGL-IPSCFEGMHGLSCIDISYNEL 292
S N + G + L +L LN+S N L + + + L +D+ E+
Sbjct: 79 SENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEV 132
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 3e-07
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 6/105 (5%)
Query: 116 TLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYLVLNGNKLSG 174
L+ +N G I + L L ++ + L L L L L+ N++ G
Sbjct: 30 VLDNCKSND-GKIEGLTAEFVNLEFLSLINVGLIS---VSNLPKLPKLKKLELSENRIFG 85
Query: 175 NLPRVLGSLSELEYLDLSTNKLSG-SIPETLGNLLKVHYLNLSNN 218
L + L L +L+LS NKL S E L L + L+L N
Sbjct: 86 GLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNC 130
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 6e-04
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQL--FGQIPRSLRNLASLNRVHL 71
LK L L N + G + L LT+L + N+L + L+ L L + L
Sbjct: 69 KLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTL-EPLKKLECLKSLDL 127
Query: 72 EQN---HLTGNISEVFGIYPNLTFLD 94
+L VF + P LT+LD
Sbjct: 128 FNCEVTNLNDYRESVFKLLPQLTYLD 153
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A Length = 168 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 6e-04
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 6 GAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLAS 65
G I F NL+ L L + L SV + L +L LE+ N++FG + L +
Sbjct: 39 GKIEGLTAEFVNLEFLSLINVGLI-SVSN-LPKLPKLKKLELSENRIFGGLDMLAEKLPN 96
Query: 66 LNRVHLEQNHLTGNISEV--FGIYPNLTFLDISHN 98
L ++L N L +IS + L LD+ +
Sbjct: 97 LTHLNLSGNKLK-DISTLEPLKKLECLKSLDLFNC 130
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 61.9 bits (150), Expect = 2e-10
Identities = 37/162 (22%), Positives = 64/162 (39%), Gaps = 27/162 (16%)
Query: 520 MHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTF--GYVAPE 577
M +HRD++++N+LLS + ++ DFG+A+ + + ++APE
Sbjct: 206 MEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 265
Query: 578 LAYTMKVTEKCDVYSFGVLALEVIK-GKHP-------RDFISLLSSSSSNMNLSLNEILD 629
+ T + DV+SFGVL E+ G P +F L +
Sbjct: 266 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT------------ 313
Query: 630 PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
R+ P ++ + L C P RPT + + L
Sbjct: 314 -RMRAP-DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 350
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 43.0 bits (101), Expect = 2e-04
Identities = 31/159 (19%), Positives = 56/159 (35%), Gaps = 26/159 (16%)
Query: 410 IGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQRE---FLNEIKALTEI-R 459
+G G V + + VAVK +L E + E ++E+K L I
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVK-----MLKEGATHSEHRALMSELKILIHIGH 84
Query: 460 HRNIVKFYGFCSHPRHS-FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALS 518
H N+V G C+ P ++ E + G+L+ L + R +
Sbjct: 85 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK----------RNEFVPYKTKGAR 134
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557
+ + + D+ + ++S + S F K L
Sbjct: 135 FRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSL 173
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 3e-10
Identities = 25/123 (20%), Positives = 50/123 (40%), Gaps = 17/123 (13%)
Query: 141 LDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLS--GNLPRVLGSLSELEYLDLSTNKLSG 198
+ + I + + N L L G K+ NL +L + + +D S N++
Sbjct: 2 VKLTAELI-EQAA-QYTNAVRDRELDLRGYKIPVIENLGA---TLDQFDAIDFSDNEIR- 55
Query: 199 SIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESL 258
+ + L ++ L ++NN+ + + L L+EL L++N + L L
Sbjct: 56 KL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNN--------SLVELGDL 106
Query: 259 EKL 261
+ L
Sbjct: 107 DPL 109
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 1e-08
Identities = 23/115 (20%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Query: 180 LGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVE-LEKLVQLSELD 238
+ LDL K+ I L + ++ S+N+ RK ++ L +L L
Sbjct: 15 YTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRK---LDGFPLLRRLKTLL 70
Query: 239 LSHNFLGGEIPPQICNLESLEKLNVSHNNLSGL-IPSCFEGMHGLSCIDISYNEL 292
+++N + L L +L +++N+L L + L+ + I N +
Sbjct: 71 VNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPV 125
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 Length = 176 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 9e-06
Identities = 27/108 (25%), Positives = 38/108 (35%), Gaps = 6/108 (5%)
Query: 89 NLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQI 148
LD+ I + Q ++FS N I + L +L L + N+I
Sbjct: 20 RDRELDLRGYKI-PVIENLGATLDQFDAIDFSDNEIR-KLDG-FPLLRRLKTLLVNNNRI 76
Query: 149 VGEIPIELGNLKSLNYLVLNGNKLSGNLPRV--LGSLSELEYLDLSTN 194
L L L+L N L L + L SL L YL + N
Sbjct: 77 CRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRN 123
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 61.3 bits (149), Expect = 4e-10
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 31/198 (15%)
Query: 425 SGEVVAVK---KFHSLLLSEISVQREFLNEIKALTEIRHRNIVK-FYGFCSHPRHSFLVY 480
+ +V A+K K+ L +E + F E L + I Y F + +LV
Sbjct: 98 ADKVFAMKILNKWEMLKRAETA---CFREERDVLVNGDSKWITTLHYAFQD-DNNLYLVM 153
Query: 481 ECLERGSLAEILSN-DGSIKEFSWIVRTNVIK----SVANALSYMH-HDCFPPIVHRDIS 534
+ G L +LS + + E + + + A+ +H VHRDI
Sbjct: 154 DYYVGGDLLTLLSKFEDRLPE-------EMARFYLAEMVIAIDSVHQLH----YVHRDIK 202
Query: 535 SKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE-FAGTFGYVAPELAYTMKVTEK-----C 588
N+L+ R++DFG L + + GT Y++PE+ M+ + C
Sbjct: 203 PDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPEC 262
Query: 589 DVYSFGVLALEVIKGKHP 606
D +S GV E++ G+ P
Sbjct: 263 DWWSLGVCMYEMLYGETP 280
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 60.3 bits (147), Expect = 5e-10
Identities = 54/230 (23%), Positives = 97/230 (42%), Gaps = 45/230 (19%)
Query: 399 RATKNFDAEQCIGIGGQASVYRG--ELPSGEVVAVKKFHSLLLSE-----ISVQREFLNE 451
RA + ++ IG G V++ G VA+K+ + + +S RE
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR--VQTGEEGMPLSTIRE---- 61
Query: 452 IKALTEIR---HRNIVKFYGFCSHPRHS-----FLVYECLERGSLAEILSNDGSIKEFSW 503
+ L + H N+V+ + C+ R LV+E +++ L L
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPG---- 116
Query: 504 IVRTNVIKSVA----NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLK 558
V T IK + L ++H +VHRD+ +N+L++S + +++DFG+A+ +
Sbjct: 117 -VPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF 172
Query: 559 PGSSNWTEFAGTFGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGK 604
T T Y APE+ +Y V D++S G + E+ + K
Sbjct: 173 Q--MALTSVVVTLWYRAPEVLLQSSYATPV----DLWSVGCIFAEMFRRK 216
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 6e-10
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 11/110 (10%)
Query: 117 LNFSMNNITGSIPPE--IGKLYQLHKLDFSLNQIVGEIPIELG---NLKSLNYLVLNGNK 171
L + N + I + G+L L KL+ NQ+ G IE + L L NK
Sbjct: 34 LLLNDNELG-RISSDGLFGRLPHLVKLELKRNQLTG---IEPNAFEGASHIQELQLGENK 89
Query: 172 LSGNLPRVLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQF 220
+ ++ L +L+ L+L N++S + + +L + LNL++N F
Sbjct: 90 IKEISNKMFLGLHQLKTLNLYDNQIS-CVMPGSFEHLNSLTSLNLASNPF 138
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 2e-07
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Query: 127 SIPPEIGKLYQLHKLDFSLNQIVGEIPIEL-GNLKSLNYLVLNGNKLSGNLPRVLGSLSE 185
IP +I +L + N++ L G L L L L N+L+G P S
Sbjct: 22 EIPRDIPLHTT--ELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASH 79
Query: 186 LEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQ 219
++ L L NK+ I L ++ LNL +NQ
Sbjct: 80 IQELQLGENKIK-EISNKMFLGLHQLKTLNLYDNQ 113
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 Length = 192 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 2e-04
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 13/76 (17%)
Query: 10 PSVGNF---TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRN---- 62
S G F +L L L N L+G P + L++ N++ + + N
Sbjct: 45 SSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKI-----KEISNKMFL 99
Query: 63 -LASLNRVHLEQNHLT 77
L L ++L N ++
Sbjct: 100 GLHQLKTLNLYDNQIS 115
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 9e-10
Identities = 47/144 (32%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 127 SIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSEL 186
S+P I LD N + L SL L L GNKL V L+ L
Sbjct: 21 SVPTGIPAQTT--YLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSL 78
Query: 187 EYLDLSTNKLSGSIPETL-GNLLKVHYLNLSNNQFRKEFPVEL-EKLVQLSELDLSHNFL 244
YL+LSTN+L S+P + L ++ L L+ NQ + P + +KL QL +L L N L
Sbjct: 79 TYLNLSTNQLQ-SLPNGVFDKLTQLKELALNTNQL-QSLPDGVFDKLTQLKDLRLYQNQL 136
Query: 245 GGEIPPQIC-NLESLEKLNVSHNN 267
+P + L SL+ + + H+N
Sbjct: 137 KS-VPDGVFDRLTSLQYIWL-HDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 9e-07
Identities = 43/166 (25%), Positives = 59/166 (35%), Gaps = 30/166 (18%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
++P G L L +NSL G L LT L + N+L L SL
Sbjct: 21 SVPT--GIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSL 78
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITG 126
++L N L + VF L L ++ N QL
Sbjct: 79 TYLNLSTNQLQSLPNGVFDKLTQLKELALNTN--------------QL-----------Q 113
Query: 127 SIPPEI-GKLYQLHKLDFSLNQIVGEIPIE-LGNLKSLNYLVLNGN 170
S+P + KL QL L NQ+ +P L SL Y+ L+ N
Sbjct: 114 SLPDGVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHDN 158
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} Length = 208 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 27/97 (27%), Positives = 31/97 (31%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N L T+L LYL N L G L LT L + NQL
Sbjct: 38 NSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFD 97
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHN 98
L L + L N L VF L L + N
Sbjct: 98 KLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQN 134
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 59.7 bits (145), Expect = 1e-09
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQRE----FLNEIKALTE 457
F+ + +G G V + +G A+K +L E+ V ++ L E + L
Sbjct: 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMK----ILKKEVIVAKDEVAHTLTENRVLQN 204
Query: 458 IRHRNIVK-FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNV-IKSVAN 515
RH + Y F + V E G L LS + E R + +
Sbjct: 205 SRHPFLTALKYSFQT-HDRLCFVMEYANGGELFFHLSRERVFSE----DRARFYGAEIVS 259
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGTFGYV 574
AL Y+H + +V+RD+ +N++L + +++DFG+ K +K G++ T F GT Y+
Sbjct: 260 ALDYLHSEK--NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYL 316
Query: 575 APEL----AYTMKVTEKCDVYSFGVLALEVIKGKHP 606
APE+ Y V D + GV+ E++ G+ P
Sbjct: 317 APEVLEDNDYGRAV----DWWGLGVVMYEMMCGRLP 348
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-09
Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Query: 182 SLSELEYLDLSTNKLS-GSIPETLGNLLKVHYLNLSNNQFRKEFPVE-LEKLVQLSELDL 239
+ S+++ L L ++ + G + ++ +L+ N + L KL +L +L+L
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTS---IANLPKLNKLKKLEL 71
Query: 240 SHNFLGGEIPPQICNLESLEKLNVSHNNLSGL-IPSCFEGMHGLSCIDISYNEL 292
S N + G + +L LN+S N + L + + L +D+ E+
Sbjct: 72 SDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEV 125
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 5e-09
Identities = 30/135 (22%), Positives = 51/135 (37%), Gaps = 7/135 (5%)
Query: 61 RNLASLNRVHLEQNHLT-GNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNF 119
R + + + L+ + G + + + L FL + ++ K +L L
Sbjct: 14 RTPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGL--TSIANLPKLNKLKKLEL 71
Query: 120 SMNNITGSIPPEIGKLYQLHKLDFSLNQIVG-EIPIELGNLKSLNYLVLNGN---KLSGN 175
S N ++G + K L L+ S N+I L L++L L L L+
Sbjct: 72 SDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDY 131
Query: 176 LPRVLGSLSELEYLD 190
V L +L YLD
Sbjct: 132 RENVFKLLPQLTYLD 146
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 4e-07
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 4/104 (3%)
Query: 116 TLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175
L+ S +N G + + +L L + I L L L L L+ N++SG
Sbjct: 23 VLDNSRSNE-GKLEGLTDEFEELEFLSTINVGLT-SIAN-LPKLNKLKKLELSDNRVSGG 79
Query: 176 LPRVLGSLSELEYLDLSTNKLSG-SIPETLGNLLKVHYLNLSNN 218
L + L +L+LS NK+ S E L L + L+L N
Sbjct: 80 LEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNC 123
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A Length = 149 | Back alignment and structure |
|---|
Score = 40.4 bits (95), Expect = 4e-04
Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 10/117 (8%)
Query: 14 NFTNLKGLYLYSNSLS-GSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRV--- 69
+++K L L ++ + G + G +L L N L S+ NL LN++
Sbjct: 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGL-----TSIANLPKLNKLKKL 69
Query: 70 HLEQNHLTGNISEVFGIYPNLTFLDISHNNFYG-EIWSSWGKCQQLGTLNFSMNNIT 125
L N ++G + + PNLT L++S N K + L +L+ +T
Sbjct: 70 ELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVT 126
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 59.0 bits (143), Expect = 2e-09
Identities = 34/172 (19%), Positives = 64/172 (37%), Gaps = 38/172 (22%)
Query: 410 IGIGGQASVYRGE---------LPSGEVVAVK--KFHSLLLSEISV-----QREFLNEIK 453
Q +Y P + ++K L +E + + +N+ K
Sbjct: 50 QTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWK 109
Query: 454 ALTEIRHRNIVKFYGFCSH-PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKS 512
L I GF H ++ FLV L R SL L + S +S
Sbjct: 110 KLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGR-SLQSAL-DVSPKHVLS-------ERS 160
Query: 513 VA-------NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARV--SDFGIAK 555
V +AL ++H + + VH +++++N+ + E +++V + +G A
Sbjct: 161 VLQVACRLLDALEFLHENEY---VHGNVTAENIFVDPEDQSQVTLAGYGFAF 209
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 59.1 bits (143), Expect = 3e-09
Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 30/168 (17%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
++ IG G V + VVA+KK + I +R L EI L +
Sbjct: 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRI-LREIAILNRLN 110
Query: 460 HRNIVKFYG-FCSHPRHSF----LVYECLERGSLAEI------LSNDGSIKEFSW-IVRT 507
H ++VK F +V E + ++ L+ IK + ++
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIADS-DFKKLFRTPVYLTEL-HIKTLLYNLLV- 167
Query: 508 NVIKSVANALSYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554
+ Y+H I+HRD+ N L++ + +V DFG+A
Sbjct: 168 --------GVKYVHSAG----ILHRDLKPANCLVNQDCSVKVCDFGLA 203
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 4e-09
Identities = 53/247 (21%), Positives = 90/247 (36%), Gaps = 61/247 (24%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
N+ + IG G VY + + + VA+KK + + I +R L EI L ++
Sbjct: 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKR-ILREITILNRLK 83
Query: 460 HRNIVKFYG-FCSHPRHSF----LVYECLERGSLAEI------LSNDGSIKEFSW-IVRT 507
I++ Y F +V E + L ++ L+ + IK + ++
Sbjct: 84 SDYIIRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEE-HIKTILYNLLL- 140
Query: 508 NVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA------------- 554
+++H I+HRD+ N LL+ + +V DFG+A
Sbjct: 141 --------GENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVN 189
Query: 555 ---------KFLKPGSSNWTEFAGTFGYVAPEL-----AYTMKVTEKCDVYSFG-VLALE 599
K T T Y APEL YT + D++S G + A E
Sbjct: 190 DLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSI----DIWSTGCIFA-E 244
Query: 600 VIKGKHP 606
++
Sbjct: 245 LLNMLQS 251
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 58.2 bits (141), Expect = 4e-09
Identities = 39/190 (20%), Positives = 76/190 (40%), Gaps = 24/190 (12%)
Query: 425 SGEVVAVK------KFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478
+ VA+K +FH EI + L ++ + N++ + H +
Sbjct: 121 VHQHVALKMVRNEKRFHRQAAEEIRI----LEHLRKQDKDNTMNVIHMLENFTFRNHICM 176
Query: 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNV 538
+E L +L E++ + FS + S+ L +H I+H D+ +N+
Sbjct: 177 TFELLSM-NLYELIKK-NKFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENI 231
Query: 539 LLSSEYEA--RVSDFGIAKFLKPGSSNW--TEFAGTFGYVAPELAYTMKVTEKCDVYSFG 594
LL + + +V DFG + + + + F Y APE+ + D++S G
Sbjct: 232 LLKQQGRSGIKVIDFGSSCYEHQRVYTYIQSRF-----YRAPEVILGARYGMPIDMWSLG 286
Query: 595 VLALEVIKGK 604
+ E++ G
Sbjct: 287 CILAELLTGY 296
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 5e-09
Identities = 45/219 (20%), Positives = 85/219 (38%), Gaps = 35/219 (15%)
Query: 410 IGIGGQASVYRGE-LPSGEVVAVK------KFHSLLLSEISVQREFLNEIKALTEIR--H 460
+G G ++V+ + + + VA+K + EI + + +N+ E
Sbjct: 27 LGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLL-QRVNDADNTKEDSMGA 85
Query: 461 RNIVKFYGFCSH----PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA-- 514
+I+K +H H +V+E L +L ++ + +K ++
Sbjct: 86 NHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEH-RGIP----LIYVKQISKQ 139
Query: 515 --NALSYMHHDCFPPIVHRDISSKNVLLSSE------YEARVSDFGIAKFLKPGSSNWTE 566
L YMH C I+H DI +NVL+ + +++D G A + ++T
Sbjct: 140 LLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW---YDEHYTN 194
Query: 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH 605
T Y +PE+ D++S L E+I G
Sbjct: 195 SIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDF 233
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 57.5 bits (140), Expect = 5e-09
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 27/167 (16%)
Query: 449 LNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTN 508
+E L+ + H I++ +G + F++ + +E G L +L
Sbjct: 54 NDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPN-------P 106
Query: 509 VIK----SVANALSYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN 563
V K V AL Y+H D I++RD+ +N+LL +++DFG AK
Sbjct: 107 VAKFYAAEVCLALEYLHSKD----IIYRDLKPENILLDKNGHIKITDFGFAK--YVPDVT 160
Query: 564 WTEFAGTFGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGKHP 606
+T GT Y+APE+ Y + D +SFG+L E++ G P
Sbjct: 161 YT-LCGTPDYIAPEVVSTKPYNKSI----DWWSFGILIYEMLAGYTP 202
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 57.5 bits (139), Expect = 5e-09
Identities = 37/181 (20%), Positives = 71/181 (39%), Gaps = 40/181 (22%)
Query: 410 IGIGGQASVYRGELPSGEVVAVK---------KFHSLLLSEISV-----QREFLNEIKAL 455
IG GG +Y ++ S E V + L +E+ + E + +
Sbjct: 43 IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRT 102
Query: 456 TEIRHRNIVKFYGFCSH----PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIK 511
++++ + K++G H + F++ + L +I + K FS K
Sbjct: 103 RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGS-DLQKIYEANA--KRFS-------RK 152
Query: 512 SVA-------NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARV--SDFGIAKFLKPGSS 562
+V + L Y+H + VH DI + N+LL+ + +V D+G+A P
Sbjct: 153 TVLQLSLRILDILEYIHEHEY---VHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGV 209
Query: 563 N 563
+
Sbjct: 210 H 210
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 7e-09
Identities = 44/208 (21%), Positives = 80/208 (38%), Gaps = 27/208 (12%)
Query: 410 IGIGGQASVYRGE-LPSGEVVAVK------KFHSLLLSEISVQREFLNEIKALTEIRHRN 462
IG G V + E VA+K F + E+ + L +
Sbjct: 62 IGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRL----LELMNKHDTEMKYY 117
Query: 463 IVKFYGFCSHPRHSFLVYECLERGSLAEILSNDG----SIKEFSWIVRTNVIKSVANALS 518
IV H LV+E L +L ++L N S+ + R + + AL
Sbjct: 118 IVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLN----LTRK-FAQQMCTALL 171
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSEYEA--RVSDFGIAKFLKPGSSNWTEFAGTFGYVAP 576
++ I+H D+ +N+LL + + ++ DFG + L ++ + Y +P
Sbjct: 172 FLATPELS-IIHCDLKPENILLCNPKRSAIKIVDFGSSCQL---GQRIYQYIQSRFYRSP 227
Query: 577 ELAYTMKVTEKCDVYSFGVLALEVIKGK 604
E+ M D++S G + +E+ G+
Sbjct: 228 EVLLGMPYDLAIDMWSLGCILVEMHTGE 255
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 1e-08
Identities = 37/179 (20%), Positives = 69/179 (38%), Gaps = 39/179 (21%)
Query: 410 IGIGGQASVYRGE-LPSGEVVAVK------KFHSLLLSEISV-----QREFLNEIKALTE 457
IG GG +Y E A + + L SE+ +++ + + +
Sbjct: 45 IGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQ 104
Query: 458 IRHRNIVKFYGFCSHP----RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSV 513
+ + I FYG + F+V E L L +I +G+ F +V
Sbjct: 105 LDYLGIPLFYGSGLTEFKGRSYRFMVMERLGI-DLQKISGQNGT---FK-------KSTV 153
Query: 514 A-------NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARV--SDFGIAKFLKPGSSN 563
+ L Y+H + + VH DI + N+LL + +V +D+G++ P ++
Sbjct: 154 LQLGIRMLDVLEYIHENEY---VHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNH 209
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 2e-08
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 20/153 (13%)
Query: 516 ALSYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGTFGY 573
AL+Y+H I++RD+ NVLL SE +++D+G+ K L+PG + T F GT Y
Sbjct: 122 ALNYLHERG----IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGTPNY 176
Query: 574 VAPEL----AYTMKVTEKCDVYSFGVLALEVIKGKHP-RDFISLLSSSSSNMNLSLNEIL 628
+APE+ Y V D ++ GVL E++ G+ P S + + + IL
Sbjct: 177 IAPEILRGEDYGFSV----DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 232
Query: 629 DPRLPLPSRNIQDKLISILEVALLCLEESPESR 661
+ ++ +P R++ K S+L+ + L + P+ R
Sbjct: 233 EKQIRIP-RSLSVKAASVLK-SF--LNKDPKER 261
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 56.2 bits (135), Expect = 3e-08
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 25/154 (16%)
Query: 513 VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGTF 571
+A L ++ I++RD+ NV+L SE +++DFG+ K + G + T F GT
Sbjct: 451 IAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKT-FCGTP 506
Query: 572 GYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEI 627
Y+APE+ Y V D ++FGVL E++ G+ P F + + I
Sbjct: 507 DYIAPEIIAYQPYGKSV----DWWAFGVLLYEMLAGQAP--F------EGEDEDELFQSI 554
Query: 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESR 661
++ + P +++ + ++I + L + + P R
Sbjct: 555 MEHNVAYP-KSMSKEAVAICK-GL--MTKHPGKR 584
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 3e-08
Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 20/156 (12%)
Query: 513 VANALSYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGT 570
++ AL+Y+H I++RD+ NVLL SE +++D+G+ K L+PG + T F GT
Sbjct: 162 ISLALNYLHERG----IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-FCGT 216
Query: 571 FGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGKHP-RDFISLLSSSSSNMNLSLN 625
Y+APE+ Y V D ++ GVL E++ G+ P S + + +
Sbjct: 217 PNYIAPEILRGEDYGFSV----DWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQ 272
Query: 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESR 661
IL+ ++ +P R++ K S+L+ + L + P+ R
Sbjct: 273 VILEKQIRIP-RSLSVKAASVLK-SF--LNKDPKER 304
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 3e-08
Identities = 58/251 (23%), Positives = 102/251 (40%), Gaps = 59/251 (23%)
Query: 390 GKIVYEEIIRATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREF 448
G++ + ++ + +G G V++ + +GEVVAVKK + QR
Sbjct: 1 GRVDRH----VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRT- 55
Query: 449 LNEIKALTEIR-HRNIVKFYGFCSHP--RHSFLVYECLE----RGSLAEILSNDGSIKEF 501
EI LTE+ H NIV R +LV++ +E A IL +
Sbjct: 56 FREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPV-HKQYV 114
Query: 502 SW-IVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560
+ +++ + Y+H ++HRD+ N+LL++E +V+DFG+++
Sbjct: 115 VYQLIK---------VIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNI 162
Query: 561 SSN---------------------WTEFAGTFGYVAPEL-----AYTMKVTEKCDVYSFG 594
T++ T Y APE+ YT + D++S G
Sbjct: 163 RRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGI----DMWSLG 218
Query: 595 -VLALEVIKGK 604
+L E++ GK
Sbjct: 219 CILG-EILCGK 228
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 55.0 bits (133), Expect = 4e-08
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 27/155 (17%)
Query: 513 VANALSYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGT 570
+A+AL Y+H + IV+RD+ +N+LL S+ ++DFG+ K ++ S+ T F GT
Sbjct: 148 IASALGYLHSLN----IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTST-FCGT 202
Query: 571 FGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNE 626
Y+APE+ Y V D + G + E++ G P F S N +
Sbjct: 203 PEYLAPEVLHKQPYDRTV----DWWCLGAVLYEMLYGLPP--F------YSRNTAEMYDN 250
Query: 627 ILDPRLPLPSRNIQDKLISILEVALLCLEESPESR 661
IL+ L L NI + +LE L L++ R
Sbjct: 251 ILNKPLQLK-PNITNSARHLLE-GL--LQKDRTKR 281
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 54.3 bits (131), Expect = 5e-08
Identities = 36/167 (21%), Positives = 64/167 (38%), Gaps = 32/167 (19%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH- 460
NF + IG G + G+ L + E VA+K L S + E + ++
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIK-----LEPMKSRAPQLHLEYRFYKQLGSG 64
Query: 461 RNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA------ 514
I + Y F +++ +V E L SL ++ + FS +K+V
Sbjct: 65 DGIPQVYYFGPCGKYNAMVLELLGP-SLEDLFDLCD--RTFS-------LKTVLMIAIQL 114
Query: 515 -NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVS-----DFGIAK 555
+ + Y+H ++RD+ +N L+ DF +AK
Sbjct: 115 ISRMEYVHSKNL---IYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 6e-08
Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 4/117 (3%)
Query: 127 SIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSEL 186
S+P I +L+ N++ L L L L+ N++ V L++L
Sbjct: 21 SVPTGIPSSAT--RLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKL 78
Query: 187 EYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHN 242
L L NKL S+P L ++ L L NQ + ++L L ++ L N
Sbjct: 79 TILYLHENKLQ-SLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 134
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 7e-05
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 2 NHLSGAIPPSVGNF---TNLKGLYLYSNSLSGSVP-GEIGNLMQLTNLEIDNNQLFGQIP 57
N + ++P V F T L LYL+ N L S+P G L QL L +D NQL +P
Sbjct: 62 NQIQ-SLPDGV--FDKLTKLTILYLHENKLQ-SLPNGVFDKLTQLKELALDTNQL-KSVP 116
Query: 58 R-SLRNLASLNRVHLEQN 74
L SL ++ L N
Sbjct: 117 DGIFDRLTSLQKIWLHTN 134
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 9e-05
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 16/117 (13%)
Query: 187 EYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVEL-EKLVQLSELDLSHNFLG 245
L+L +NKL L ++ L+LS NQ + P + +KL +L+ L L N L
Sbjct: 31 TRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQI-QSLPDGVFDKLTKLTILYLHENKL- 88
Query: 246 GEIPPQIC-NLESLEKLNVSHNNLSGLIPSCFEGMHGL------------SCIDISY 289
+P + L L++L + N L + F+ + L SC I Y
Sbjct: 89 QSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 145
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 1e-04
Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
++P G ++ L L SN L G L QLT L + NQ+ L L
Sbjct: 21 SVPT--GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKL 78
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHN 98
++L +N L + VF L L + N
Sbjct: 79 TILYLHENKLQSLPNGVFDKLTQLKELALDTN 110
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} Length = 177 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 4e-04
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 8 IPPSV-GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL-RNLAS 65
+P V T L L L N + G L +LT L + N+L +P + L
Sbjct: 43 LPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKL-QSLPNGVFDKLTQ 101
Query: 66 LNRVHLEQNHL 76
L + L+ N L
Sbjct: 102 LKELALDTNQL 112
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 7e-08
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 15/100 (15%)
Query: 513 VANALSYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGT 570
+ +AL Y+H D +V+RDI +N++L + +++DFG+ K + G++ T F GT
Sbjct: 114 IVSALEYLHSRD----VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGT 168
Query: 571 FGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGKHP 606
Y+APE+ Y V D + GV+ E++ G+ P
Sbjct: 169 PEYLAPEVLEDNDYGRAV----DWWGLGVVMYEMMCGRLP 204
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} Length = 372 | Back alignment and structure |
|---|
Score = 53.6 bits (129), Expect = 9e-08
Identities = 43/284 (15%), Positives = 82/284 (28%), Gaps = 35/284 (12%)
Query: 18 LKGLYLYSN-SLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHL 76
L GL N ++ + I NL L N + +L + L L+ + ++
Sbjct: 3 LVGLLSAHNRAVLAQLGCPIKNLDALENAQAIKKKLGKLGRQVLPPSELLDHLFF--HYE 60
Query: 77 TGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGK-----CQQLGTLNFSMNNITGSIPPE 131
N + +L L+++ + L +N + + +
Sbjct: 61 FQNQRFSAEVLSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRT 120
Query: 132 IGK-LYQLHKLDFSLNQIVGEIPIEL------GNLKSLNYLVLNGNKLSGN----LPRVL 180
+ + KL LN + G + + + L L+ N L+ L L
Sbjct: 121 LLPVFLRARKLGLQLNSL-GPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGL 179
Query: 181 GSLSELEYLDLSTNKLSGSIPETLGNLLKVH----YLNLSNNQFR----KEFPVELEKLV 232
+ + +L L L E L L + LN++ N +
Sbjct: 180 AGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHP 239
Query: 233 QLSELDLSHNFLG-------GEIPPQICNLESLEKLNVSHNNLS 269
L L L N L ++ + +S
Sbjct: 240 SLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} Length = 372 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 5e-06
Identities = 34/153 (22%), Positives = 53/153 (34%), Gaps = 18/153 (11%)
Query: 158 NLKSLNYLVLNGNKLSGN-LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKV-----H 211
+L+ + L +L L +L L L N L + L +LL
Sbjct: 99 GRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQIT 158
Query: 212 YLNLSNNQFR----KEFPVELEKLVQLSELDLSHNFLGGE----IPPQICNLESLEKLNV 263
L LSNN L ++ L L H LG E + Q+ L++LNV
Sbjct: 159 TLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNV 218
Query: 264 SHNNLSG----LIPSCFEGMHGLSCIDISYNEL 292
++N + L + + +NEL
Sbjct: 219 AYNGAGDTAALALARAAREHPSLELLHLYFNEL 251
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} Length = 372 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 5e-04
Identities = 38/251 (15%), Positives = 74/251 (29%), Gaps = 44/251 (17%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIGN-LMQLTNLEIDNNQLFGQIPRSL-----RNLASLN 67
L + L S L + + ++ L + N L + + L + +
Sbjct: 99 GRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQIT 158
Query: 68 RVHLEQNHLTGN----ISEVFGIYPNLTFLDISHNNFYGE----IWSSWGKCQQLGTLNF 119
+ L N LT + E ++T L + H E + + + +QL LN
Sbjct: 159 TLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNV 218
Query: 120 SMNNITGSIPPEIGKL----YQLHKLDFSLNQI-------VGEIPIELGNLKSLNYLVLN 168
+ N + + + L L N++ + ++ + +
Sbjct: 219 AYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTE 278
Query: 169 GNKLS-------GNLPRVLGSLSE--------LEYLDLSTNKLSGSIPETLGNLLKVH-- 211
G +S + R L S L DL ++ + P LL+V
Sbjct: 279 GTAVSEYWSVILSEVQRNLNSWDRARVQRHLELLLRDLEDSRGATLNPWRKAQLLRVEGE 338
Query: 212 --YLNLSNNQF 220
L
Sbjct: 339 VRALLEQLGSS 349
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 53.4 bits (129), Expect = 1e-07
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 27/155 (17%)
Query: 513 VANALSYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGT 570
+ +AL ++H I++RD+ NVLL E +++DFG+ K + G + T F GT
Sbjct: 133 IISALMFLHDKG----IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT-FCGT 187
Query: 571 FGYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNE 626
Y+APE+ Y V D ++ GVL E++ G P F + N +
Sbjct: 188 PDYIAPEILQEMLYGPAV----DWWAMGVLLYEMLCGHAP--F------EAENEDDLFEA 235
Query: 627 ILDPRLPLPSRNIQDKLISILEVALLCLEESPESR 661
IL+ + P + + IL+ + + ++P R
Sbjct: 236 ILNDEVVYP-TWLHEDATGILK-SF--MTKNPTMR 266
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 1e-07
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 19/151 (12%)
Query: 513 VANALSYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGT 570
+ L ++H IV+RD+ N+LL + +++DFG+ K + + T F GT
Sbjct: 127 IILGLQFLHSKG----IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT-FCGT 181
Query: 571 FGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP 630
Y+APE+ K D +SFGVL E++ G+ P F + + I
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP--F------HGQDEEELFHSIRMD 233
Query: 631 RLPLPSRNIQDKLISILEVALLCLEESPESR 661
P R ++ + +L L PE R
Sbjct: 234 NPFYP-RWLEKEAKDLLV-KL--FVREPEKR 260
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 2e-07
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 17/139 (12%)
Query: 516 ALSYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGTFGY 573
AL ++H I++RD+ +N+LL E +++DFG++K + ++ F GT Y
Sbjct: 138 ALDHLHSLG----IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-FCGTVEY 192
Query: 574 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633
+APE+ T+ D +SFGVL E++ G P F + ++ IL +L
Sbjct: 193 MAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP--F------QGKDRKETMTMILKAKLG 244
Query: 634 LPSRNIQDKLISILEVALL 652
+P + + + S+L L
Sbjct: 245 MP-QFLSPEAQSLLR-MLF 261
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 52.6 bits (126), Expect = 2e-07
Identities = 43/236 (18%), Positives = 74/236 (31%), Gaps = 66/236 (27%)
Query: 429 VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIV-KFYGFCSHPRHSF---------- 477
VA+K ++ S L+EI+ L +R+ + F
Sbjct: 65 VAMK----VVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHI 120
Query: 478 -LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSK 536
+V+E L L + + V+ +I+ V L Y+H C I+H DI +
Sbjct: 121 CMVFEVL-GHHLLKWIIKSNYQGLPLPCVKK-IIQQVLQGLDYLHTKC--RIIHTDIKPE 176
Query: 537 NVLLSSE-----------------------------------------YEARVSDFGIAK 555
N+LLS E + ++ K
Sbjct: 177 NILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVK 236
Query: 556 FLKPGSSNW-----TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606
G++ W TE T Y + E+ D++S +A E+ G +
Sbjct: 237 IADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYL 292
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 3e-07
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 25/154 (16%)
Query: 513 VANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGTF 571
+A L ++ I++RD+ NV+L SE +++DFG+ K + G + T F GT
Sbjct: 130 IAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKT-FCGTP 185
Query: 572 GYVAPEL----AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEI 627
Y+APE+ Y V D ++FGVL E++ G+ P F + + I
Sbjct: 186 DYIAPEIIAYQPYGKSV----DWWAFGVLLYEMLAGQAP--F------EGEDEDELFQSI 233
Query: 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESR 661
++ + P +++ + ++I + L + + P R
Sbjct: 234 MEHNVAYP-KSMSKEAVAICK-GL--MTKHPGKR 263
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 4e-07
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 19/148 (12%)
Query: 516 ALSYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK-FLKPGSSNWTEFAGTFGY 573
AL ++H I++RD+ +N++L+ + +++DFG+ K + G+ T F GT Y
Sbjct: 133 ALGHLHQKG----IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT-FCGTIEY 187
Query: 574 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633
+APE+ D +S G L +++ G P F + N ++++IL +L
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP--F------TGENRKKTIDKILKCKLN 239
Query: 634 LPSRNIQDKLISILEVALLCLEESPESR 661
LP + + +L+ L L+ + SR
Sbjct: 240 LP-PYLTQEARDLLK-KL--LKRNAASR 263
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 50.7 bits (120), Expect = 7e-07
Identities = 31/217 (14%), Positives = 57/217 (26%), Gaps = 45/217 (20%)
Query: 398 IRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFH---------------SLLLSEI 442
T+ + IG G V++ VA+K +L EI
Sbjct: 16 CLPTEKLQRCEKIGEGVFGEVFQTIAD-HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEI 74
Query: 443 SVQREFLNEIKALTEIRHRNIVKFYGFC----SHPRHSFLVYECL--ERGSLAEILS--- 493
+ +E L+ + R + S+P ++ +GS +
Sbjct: 75 IISKE-LSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFK 133
Query: 494 -----------NDGS------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSK 536
G K S +++ + +L+ HRD+
Sbjct: 134 DDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASL--RFEHRDLHWG 191
Query: 537 NVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGY 573
NVLL ++ K S +
Sbjct: 192 NVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTL 228
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 1e-06
Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 516 ALSYMH-HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK--FLKPGSSNWTEFAGTFG 572
AL ++H I++RDI +N+LL S ++DFG++K + F GT
Sbjct: 171 ALEHLHKLG----IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD-FCGTIE 225
Query: 573 YVAPEL------AYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNE 626
Y+AP++ + V D +S GVL E++ G P F ++
Sbjct: 226 YMAPDIVRGGDSGHDKAV----DWWSLGVLMYELLTGASP--FTV--DGEKNSQAEISRR 277
Query: 627 ILDPRLPLP---SRNIQDKLISILE 648
IL P P S +D + +L
Sbjct: 278 ILKSEPPYPQEMSALAKDLIQRLLM 302
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 2e-06
Identities = 38/171 (22%), Positives = 60/171 (35%), Gaps = 40/171 (23%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKK-----FHSLLLSEISVQREFLNEIKALT 456
++ + IG G ++ G L + + VA+K L E +
Sbjct: 11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCT---- 66
Query: 457 EIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA-- 514
I Y F H+ LV + L SL ++L G ++FS +K+VA
Sbjct: 67 -----GIPNVYYFGQEGLHNVLVIDLLGP-SLEDLLDLCG--RKFS-------VKTVAMA 111
Query: 515 -----NALSYMHHDCFPPIVHRDISSKNVLLSSEYEAR-----VSDFGIAK 555
+ +H V+RDI N L+ V DFG+ K
Sbjct: 112 AKQMLARVQSIHEKSL---VYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 48.9 bits (117), Expect = 2e-06
Identities = 35/162 (21%), Positives = 63/162 (38%), Gaps = 24/162 (14%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKK-----FHSLLLSEISVQREFLNEIKALT 456
+ + IG G +Y G + +GE VA+K H L E + K +
Sbjct: 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKI-------YKMMQ 62
Query: 457 EIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANA 516
I + ++ +V E L SL ++ + ++FS + + +
Sbjct: 63 GGVG--IPTIRWCGAEGDYNVMVMELLGP-SLEDLFNFCS--RKFSLKTVLLLADQMISR 117
Query: 517 LSYMHHDCFPPIVHRDISSKNVLLSSEYEA---RVSDFGIAK 555
+ Y+H F +HRD+ N L+ + + DFG+AK
Sbjct: 118 IEYIHSKNF---IHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 9e-06
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 127 SIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSEL 186
S+P I +L + NQI P +L +L L N NKL+ V L++L
Sbjct: 26 SVPAGI--PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQL 83
Query: 187 EYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNN 218
LDL+ N L SIP NL + ++ L NN
Sbjct: 84 TQLDLNDNHLK-SIPRGAFDNLKSLTHIYLYNN 115
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 5e-05
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 16 TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPR-SLRNLASLNRVHLEQN 74
NL+ LY SN L+ G L QLT L++++N L IPR + NL SL ++L N
Sbjct: 57 VNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHL-KSIPRGAFDNLKSLTHIYLYNN 115
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} Length = 174 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 8e-05
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 164 YLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLG---NLLKVHYLNLSNNQ 219
L LN N+++ P V L L+ L ++NKL+ +IP G L ++ L+L++N
Sbjct: 37 RLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPT--GVFDKLTQLTQLDLNDNH 92
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 1e-05
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Query: 127 SIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSEL 186
S+P I L NQI P L L L L+ N+L+ V L++L
Sbjct: 23 SVPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQL 80
Query: 187 EYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNN 218
L L+ N+L SIP NL + ++ L NN
Sbjct: 81 TQLSLNDNQLK-SIPRGAFDNLKSLTHIWLLNN 112
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D Length = 170 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 6e-05
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 8 IPPSV-GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPR-SLRNLAS 65
+ P V T L L L +N L+ G L QLT L +++NQL IPR + NL S
Sbjct: 45 LEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL-KSIPRGAFDNLKS 103
Query: 66 LNRVHLEQN 74
L + L N
Sbjct: 104 LTHIWLLNN 112
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 46.9 bits (111), Expect = 1e-05
Identities = 38/162 (23%), Positives = 62/162 (38%), Gaps = 24/162 (14%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKK-----FHSLLLSEISVQREFLNEIKALT 456
F + IG G +Y G + + E VA+K H LL E + + L
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKI-------YRILQ 60
Query: 457 EIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANA 516
I F ++ LV + L SL ++ + ++ S + + N
Sbjct: 61 GGTG--IPNVRWFGVEGDYNVLVMDLLGP-SLEDLFNFCS--RKLSLKTVLMLADQMINR 115
Query: 517 LSYMHHDCFPPIVHRDISSKNVLLSSEYEAR---VSDFGIAK 555
+ ++H F +HRDI N L+ A + DFG+AK
Sbjct: 116 VEFVHSKSF---LHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 Length = 185 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 3e-04
Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 19/134 (14%)
Query: 156 LGNLKSLNYLVLNGNKLSGN-----LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKV 210
N L + LN L + + ++ + + + + L +LKV
Sbjct: 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKV 91
Query: 211 H----YLNLSNNQFRKEFPVELEKLVQ----LSELDLSHNF--LGGEIPPQICNL----E 256
+ LN+ +N + L + +Q L EL + + LG + +I N+
Sbjct: 92 NNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNT 151
Query: 257 SLEKLNVSHNNLSG 270
+L K
Sbjct: 152 TLLKFGYHFTQQGP 165
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 6e-04
Identities = 45/211 (21%), Positives = 80/211 (37%), Gaps = 49/211 (23%)
Query: 425 SGEVVAVK------KFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478
VA+K K+ EI+V L +IK + V + + H +
Sbjct: 44 GKSQVALKIIRNVGKYREAARLEINV----LKKIKEKDKENKFLCVLMSDWFNFHGHMCI 99
Query: 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA----NALSYMHHDCFPPIVHRDIS 534
+E L + + E L + + + ++ +A +AL ++H + + H D+
Sbjct: 100 AFELLGK-NTFEFLKE-NNFQPYP----LPHVRHMAYQLCHALRFLHENQ---LTHTDLK 150
Query: 535 SKNVLL-SSEYEA------------------RVSDFGIAKFLKPGSSNW--TEFAGTFGY 573
+N+L +SE+E RV+DFG A F + T Y
Sbjct: 151 PENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRH-----Y 205
Query: 574 VAPELAYTMKVTEKCDVYSFGVLALEVIKGK 604
PE+ + + CDV+S G + E +G
Sbjct: 206 RPPEVILELGWAQPCDVWSIGCILFEYYRGF 236
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 673 | |||
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3rgz_A | 768 | Protein brassinosteroid insensitive 1; phytohormon | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2id5_A | 477 | Lingo-1, leucine rich repeat neuronal 6A; CNS-spec | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3v47_A | 455 | TOLL-like receptor 5B and variable lymphocyte REC | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 100.0 | |
| 3t6q_A | 606 | CD180 antigen; protein-protein complex, leucine ri | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 100.0 | |
| 4eco_A | 636 | Uncharacterized protein; leucine-rich repeats, pro | 100.0 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 100.0 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 100.0 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 100.0 | |
| 3j0a_A | 844 | TOLL-like receptor 5; membrane protein, leucine-ri | 100.0 | |
| 3vq2_A | 606 | TLR4, TOLL-like receptor 4; leucine rich repeat MD | 100.0 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 4ecn_A | 876 | Leucine-rich repeat protein; leucine-rich repeats, | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 2z7x_B | 520 | TOLL-like receptor 1, variable lymphocyte recepto; | 100.0 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 100.0 | |
| 2z63_A | 570 | TOLL-like receptor 4, variable lymphocyte recepto; | 100.0 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 100.0 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 100.0 | |
| 1ogq_A | 313 | PGIP-2, polygalacturonase inhibiting protein; inhi | 100.0 | |
| 3a79_B | 562 | TLR6, VLRB.59, TOLL-like receptor 6, variable lymp | 100.0 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 100.0 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 100.0 | |
| 3o6n_A | 390 | APL1; leucine-rich repeat, protein binding; HET: N | 100.0 | |
| 1ziw_A | 680 | TOLL-like receptor 3; innate immunity, immune syst | 100.0 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 100.0 | |
| 2ft3_A | 332 | Biglycan; proteoglycan, dimer interface, structura | 100.0 | |
| 1xku_A | 330 | Decorin; proteoglycan, leucine-rich repeat, struct | 100.0 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 100.0 | |
| 2z81_A | 549 | CD282 antigen, TOLL-like receptor 2, variable lymp | 100.0 | |
| 4fmz_A | 347 | Internalin; leucine rich repeat, structural genomi | 100.0 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.98 | |
| 1o6v_A | 466 | Internalin A; bacterial infection, extracellular r | 99.97 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.97 | |
| 4g8a_A | 635 | TOLL-like receptor 4; leucine rich repeat MD-2 rel | 99.97 | |
| 2z80_A | 353 | TOLL-like receptor 2, variable lymphocyte recepto; | 99.97 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.97 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.97 | |
| 2z66_A | 306 | Variable lymphocyte receptor B, TOLL-like recepto; | 99.97 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.97 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.97 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.97 | |
| 3zyj_A | 440 | Leucine-rich repeat-containing protein 4C; cell ad | 99.97 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.97 | |
| 3bz5_A | 457 | Internalin-J, INLJ; leucine rich repeat (LRR), cys | 99.97 | |
| 3zyi_A | 452 | Leucine-rich repeat-containing protein 4; cell adh | 99.97 | |
| 1ozn_A | 285 | Reticulon 4 receptor; NOGO receptor, MAD, myelinat | 99.96 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.96 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.96 | |
| 4fcg_A | 328 | Uncharacterized protein; structural genomics, PSI- | 99.96 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.96 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.96 | |
| 3o53_A | 317 | Protein LRIM1, AGAP006348-PA; leucine-rich repeat, | 99.96 | |
| 1wwl_A | 312 | Monocyte differentiation antigen CD14; LPS, immune | 99.95 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.95 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.95 | |
| 3oja_A | 487 | Leucine-rich immune molecule 1; coiled-coil, helix | 99.95 | |
| 1jl5_A | 454 | Outer protein YOPM; leucine-rich repeat, molecular | 99.95 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.95 | |
| 1z7x_W | 461 | Ribonuclease inhibitor; leucine-rich repeat, enzym | 99.95 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.94 | |
| 2z62_A | 276 | TOLL-like receptor 4, variable lymphocyte recepto; | 99.94 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.93 | |
| 3g06_A | 622 | SSPH2 (leucine-rich repeat protein); E3 ubiquitin | 99.93 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.93 | |
| 2o6q_A | 270 | Variable lymphocyte receptor A; leucine-rich repea | 99.93 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.92 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.92 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.92 | |
| 1p9a_G | 290 | Platelet glycoprotein IB alpha chain precursor; pl | 99.92 | |
| 3rfs_A | 272 | Internalin B, repeat modules, variable lymphocyte | 99.92 | |
| 3goz_A | 362 | Leucine-rich repeat-containing protein; LEGL7, NES | 99.92 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.91 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.91 | |
| 2xwt_C | 239 | Thyrotropin receptor; signaling protein-immune sys | 99.91 | |
| 2ca6_A | 386 | RAN GTPase-activating protein 1; GAP, GTPase activ | 99.91 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.91 | |
| 2ast_B | 336 | S-phase kinase-associated protein 2; SCF-substrate | 99.9 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.9 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.9 | |
| 4glp_A | 310 | Monocyte differentiation antigen CD14; alpha beta | 99.9 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.89 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.89 | |
| 1h6u_A | 308 | Internalin H; cell adhesion, leucine rich repeat, | 99.89 | |
| 3m19_A | 251 | Variable lymphocyte receptor A diversity region; a | 99.89 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.88 | |
| 4ay9_X | 350 | Follicle-stimulating hormone receptor; hormone-rec | 99.88 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.85 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.85 | |
| 2o6s_A | 208 | Variable lymphocyte receptor B; leucine-rich repea | 99.85 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.84 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.84 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.84 | |
| 3ogk_B | 592 | Coronatine-insensitive protein 1; leucine rich rep | 99.84 | |
| 3cvr_A | 571 | Invasion plasmid antigen; leucine rich repeat and | 99.83 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.83 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.83 | |
| 1h6t_A | 291 | Internalin B; cell adhesion, leucine rich repeat, | 99.83 | |
| 1m9s_A | 605 | Internalin B; cell invasion, GW domains, SH3 domai | 99.82 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.82 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.81 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.81 | |
| 2v9t_B | 220 | SLIT homolog 2 protein N-product; structural prote | 99.81 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.8 | |
| 2xot_A | 361 | Amphoterin-induced protein 1; cell adhesion, neuro | 99.8 | |
| 2p1m_B | 594 | Transport inhibitor response 1 protein; F-BOX, leu | 99.8 | |
| 2v70_A | 220 | SLIT-2, SLIT homolog 2 protein N-product; neurogen | 99.8 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.79 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.79 | |
| 3e6j_A | 229 | Variable lymphocyte receptor diversity region; var | 99.79 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.78 | |
| 4fdw_A | 401 | Leucine rich hypothetical protein; putative cell s | 99.78 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.78 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.78 | |
| 1dce_A | 567 | Protein (RAB geranylgeranyltransferase alpha subun | 99.78 | |
| 1xeu_A | 263 | Internalin C; cellular invasion, leucine-rich repe | 99.77 | |
| 4ezg_A | 197 | Putative uncharacterized protein; internalin-A, le | 99.77 | |
| 3sb4_A | 329 | Hypothetical leucine rich repeat protein; LRR, rig | 99.76 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.75 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.74 | |
| 4b8c_D | 727 | Glucose-repressible alcohol dehydrogenase transcr | 99.72 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.71 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.69 | |
| 1w8a_A | 192 | SLIT protein; signaling protein, secreted protein, | 99.69 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.69 | |
| 2ell_A | 168 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.68 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.66 | |
| 2je0_A | 149 | Acidic leucine-rich nuclear phosphoprotein 32 FAM | 99.65 | |
| 2wfh_A | 193 | SLIT homolog 2 protein C-product; developmental pr | 99.65 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.64 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 99.63 | |
| 2o6r_A | 177 | Variable lymphocyte receptor B; leucine-rich repea | 99.61 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.61 | |
| 1a9n_A | 176 | U2A', U2A'; complex (nuclear protein/RNA), RNA, sn | 99.59 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.58 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 99.56 | |
| 1ds9_A | 198 | Outer arm dynein; leucine-rich repeat, beta-BETA-a | 99.54 | |
| 4fs7_A | 394 | Uncharacterized protein; leucine-rich repeats, pro | 99.53 | |
| 4gt6_A | 394 | Cell surface protein; leucine rich repeats, putati | 99.52 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.51 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.48 | |
| 3g39_A | 170 | Variable lymphocyte receptor VLRB.2D; antibody, X- | 99.46 | |
| 2r9u_A | 174 | Variable lymphocyte receptor; adaptive immunity, V | 99.46 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.43 | |
| 3un9_A | 372 | NLR family member X1; leucine rich repeat (LRR), a | 99.41 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 99.3 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.29 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.29 | |
| 2ifg_A | 347 | High affinity nerve growth factor receptor; TRK, T | 99.29 | |
| 4h09_A | 379 | Hypothetical leucine rich repeat protein; two LRR_ | 99.27 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.16 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 99.1 | |
| 2ra8_A | 362 | Uncharacterized protein Q64V53_bacfr; WGR domain, | 99.08 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 99.07 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.98 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.78 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.69 | |
| 1io0_A | 185 | Tropomodulin; LRR protein, right-handed super-heli | 98.68 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 98.54 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 98.45 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 98.43 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.42 | |
| 3rw6_A | 267 | Nuclear RNA export factor 1; retroviral constituti | 98.41 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 98.39 | |
| 3e4g_A | 176 | ATP synthase subunit S, mitochondrial; leucine-ric | 98.36 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 98.31 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 98.22 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 98.04 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 97.94 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.91 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 97.89 | |
| 1pgv_A | 197 | TMD-1, tropomodulin TMD-1; structural genomics, PS | 97.85 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.81 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 97.79 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 97.43 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 97.4 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 97.39 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 97.32 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 97.24 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.15 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 97.11 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 97.1 | |
| 3rfe_A | 130 | Platelet glycoprotein IB beta chain; platelet surf | 96.82 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 96.8 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 96.74 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 96.64 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 96.15 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 95.0 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 94.34 | |
| 4ann_A | 215 | ESSB; membrane protein, membrane secretion, ESS ty | 92.03 | |
| 4ano_A | 219 | ESSB; membrane protein, membrane secretion, ESS ty | 90.34 | |
| 2jwa_A | 44 | Receptor tyrosine-protein kinase ERBB-2; transmemb | 86.74 | |
| 2lz0_A | 100 | Uncharacterized protein; hypothetical leucine rich | 84.16 | |
| 2ks1_B | 44 | Epidermal growth factor receptor; ERBB1, ERBB2, tr | 84.04 | |
| 2l2t_A | 44 | Receptor tyrosine-protein kinase ERBB-4; transmemb | 83.61 | |
| 3cxl_A | 463 | N-chimerin; SH2, RHO-GAP, structural genomics cons | 82.14 | |
| 2lz0_A | 100 | Uncharacterized protein; hypothetical leucine rich | 80.38 |
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-54 Score=433.37 Aligned_cols=257 Identities=23% Similarity=0.372 Sum_probs=202.6
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+++.+.+.||+|+||+||+|++.+ .||||+++.... .....+.|.+|+.++++++|||||+++|++.+ +..++||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVm 110 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDP-TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVT 110 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEE
Confidence 3578889999999999999998753 699999875432 33456889999999999999999999999865 5689999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|||++|+|.++++... ..++|.++..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+.....
T Consensus 111 Ey~~gGsL~~~l~~~~--~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQE--TKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp ECCSSCBHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred EcCCCCCHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 9999999999998654 4589999999999999999999999 9999999999999999999999999999876432
Q ss_pred C--CCceeccccccccccccccc---CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC
Q 005864 561 S--SNWTEFAGTFGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635 (673)
Q Consensus 561 ~--~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
. .......||+.|||||++.+ ++|+.++|||||||++|||+||+.||.......... .........+.++
T Consensus 186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~---~~~~~~~~~p~~~-- 260 (307)
T 3omv_A 186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQII---FMVGRGYASPDLS-- 260 (307)
T ss_dssp --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHH---HHHHTTCCCCCST--
T ss_pred CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHH---HHHhcCCCCCCcc--
Confidence 2 23345689999999999863 468999999999999999999999997433211100 0001111122211
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
......+.++.+++.+||+.||++||||+||++.|+
T Consensus 261 -~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le 296 (307)
T 3omv_A 261 -KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp -TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHH
T ss_pred -cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 122234456899999999999999999999998875
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-55 Score=437.84 Aligned_cols=254 Identities=22% Similarity=0.342 Sum_probs=209.1
Q ss_pred CCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 403 NFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
++++.+.||+|+||+||+|.+. +++.||||+++... +....++|.+|+.++++++|||||+++|+|.+++..
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~ 104 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL 104 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence 4566788999999999999762 57889999997543 233467899999999999999999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCC-------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC
Q 005864 477 FLVYECLERGSLAEILSNDGS-------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 543 (673)
++|||||++|+|.+++..... ...++|.++.+|+.|||+||+|||++ +||||||||+|||++++
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~ 181 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDK 181 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCC
Confidence 999999999999999975431 23589999999999999999999999 99999999999999999
Q ss_pred CceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccc
Q 005864 544 YEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNM 620 (673)
Q Consensus 544 ~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~ 620 (673)
+.+||+|||+++....... ..+...||+.|||||++.++.++.++|||||||++|||+| |+.||......+
T Consensus 182 ~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~------ 255 (308)
T 4gt4_A 182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD------ 255 (308)
T ss_dssp GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH------
T ss_pred CCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH------
Confidence 9999999999987643322 2345678999999999999999999999999999999998 899997543211
Q ss_pred ccccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 621 NLSLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 621 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....+... ..+.+. +.+.++.+++.+||+.||++||||+||++.|+.
T Consensus 256 --~~~~i~~~~~~~~p~----~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 256 --VVEMIRNRQVLPCPD----DCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp --HHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred --HHHHHHcCCCCCCcc----cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 11122222 223332 234568999999999999999999999999873
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-55 Score=437.71 Aligned_cols=253 Identities=25% Similarity=0.429 Sum_probs=208.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
++|.+.+.||+|+||+||+|++. +++.||||+++.. .....++|.+|+++|++++|||||+++|+|.+++.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 89 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 89 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence 45778899999999999999763 4788999999754 23346789999999999999999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCC----------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc
Q 005864 476 SFLVYECLERGSLAEILSNDG----------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE 545 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 545 (673)
.++|||||++|+|.++++..+ ....++|.++..|+.|||+||+|||++ +|+||||||+|||+++++.
T Consensus 90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~ 166 (299)
T 4asz_A 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLL 166 (299)
T ss_dssp EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCc
Confidence 999999999999999997643 234689999999999999999999999 9999999999999999999
Q ss_pred eEEecccceeecCCCCCCc--eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccc
Q 005864 546 ARVSDFGIAKFLKPGSSNW--TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNL 622 (673)
Q Consensus 546 ~kl~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~ 622 (673)
+||+|||+|+......... ....||+.|||||++.+..++.++|||||||++|||+| |+.||......+
T Consensus 167 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~-------- 238 (299)
T 4asz_A 167 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-------- 238 (299)
T ss_dssp EEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH--------
T ss_pred EEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--------
Confidence 9999999998764433221 23468999999999999999999999999999999999 899997543221
Q ss_pred ccccccCCC-CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 623 SLNEILDPR-LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 623 ~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
....+.... ++.|. ..+.++.+++.+||+.||++||||+||++.|+
T Consensus 239 ~~~~i~~~~~~~~p~----~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~ 285 (299)
T 4asz_A 239 VIECITQGRVLQRPR----TCPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285 (299)
T ss_dssp HHHHHHHTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHcCCCCCCCc----cchHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 111222222 22222 23446899999999999999999999999886
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-54 Score=435.69 Aligned_cols=253 Identities=25% Similarity=0.401 Sum_probs=203.2
Q ss_pred cCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
++|.+.+.||+|+||+||+|++. +++.||||+++.. .....++|.+|+++|++++|||||+++|+|.+++.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~ 117 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRP 117 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence 35667789999999999999864 4788999999754 23356789999999999999999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCC------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC
Q 005864 476 SFLVYECLERGSLAEILSNDGS------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE 543 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 543 (673)
.++|||||++|+|.++++..+. ..+++|.++..|+.|||+||+|||++ +|+||||||+|||++++
T Consensus 118 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~ 194 (329)
T 4aoj_A 118 LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQG 194 (329)
T ss_dssp EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETT
T ss_pred EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCC
Confidence 9999999999999999986532 23589999999999999999999999 99999999999999999
Q ss_pred CceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccc
Q 005864 544 YEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNM 620 (673)
Q Consensus 544 ~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~ 620 (673)
+.+||+|||+++....... ......||+.|||||++.+..++.++|||||||++|||+| |+.||......+.
T Consensus 195 ~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~----- 269 (329)
T 4aoj_A 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA----- 269 (329)
T ss_dssp TEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHH-----
T ss_pred CcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHH-----
Confidence 9999999999987644322 2234679999999999999999999999999999999999 8999975432211
Q ss_pred ccccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 621 NLSLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 621 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+... +++.|.. .+.++.+++.+||+.||++||||+||++.|+
T Consensus 270 ---~~~i~~g~~~~~p~~----~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~ 315 (329)
T 4aoj_A 270 ---IDCITQGRELERPRA----CPPEVYAIMRGCWQREPQQRHSIKDVHARLQ 315 (329)
T ss_dssp ---HHHHHHTCCCCCCTT----CCHHHHHHHHHHCCSSTTTSCCHHHHHHHHH
T ss_pred ---HHHHHcCCCCCCccc----ccHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 1111111 2233322 3446899999999999999999999999886
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-54 Score=437.03 Aligned_cols=252 Identities=21% Similarity=0.305 Sum_probs=206.0
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|++. +|+.||||++...... ....+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS-SKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC-HHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 57999999999999999999764 6999999999765433 334678999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|||+||+|.+++...+. ..+++.++..|+.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 103 Ey~~gg~L~~~i~~~~~-~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKG-VLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp ECCTTCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred eCCCCCcHHHHHHHcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 99999999999976542 4578899999999999999999999 9999999999999999999999999999876543
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
....+...||+.|||||++.+..|+.++||||+||++|||++|+.||...... .....+.....+... .
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~--------~~~~~i~~~~~~~~~---~ 247 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK--------NLVLKIISGSFPPVS---L 247 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHTCCCCCC---T
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--------HHHHHHHcCCCCCCC---c
Confidence 33334567999999999999999999999999999999999999999743321 122223333332111 1
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.++.+++.+||+.||++|||++|+++
T Consensus 248 ~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 248 HYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 23456889999999999999999999975
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-54 Score=433.19 Aligned_cols=249 Identities=26% Similarity=0.379 Sum_probs=211.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
..|+..+.||+|+||+||+|++. +|+.||||++...... ..+.+.+|+.+|++++|||||++++++.+++..|+||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh---HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 46888999999999999999775 6999999999754322 2456889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|||+||+|.+++... .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 151 Ey~~gg~L~~~l~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 223 (346)
T 4fih_A 151 EFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 223 (346)
T ss_dssp CCCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred eCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence 999999999999763 489999999999999999999999 9999999999999999999999999999988666
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||......+. ...+.+. .+.....+.
T Consensus 224 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~--------~~~i~~~-~~~~~~~~~ 294 (346)
T 4fih_A 224 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKA--------MKMIRDN-LPPRLKNLH 294 (346)
T ss_dssp SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--------HHHHHHS-SCCCCSCGG
T ss_pred CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH--------HHHHHcC-CCCCCCccc
Confidence 5566678999999999999999999999999999999999999999974332211 1111111 111112233
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.++.+++.+||+.||++|||++|+++
T Consensus 295 ~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 295 KVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 44567899999999999999999999975
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-53 Score=424.42 Aligned_cols=248 Identities=21% Similarity=0.328 Sum_probs=213.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|+.. +|+.||||++.+.........+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46999999999999999999764 79999999998765445555788999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|||+||+|.+++...+ .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 112 Ey~~gG~L~~~i~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp CCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 9999999999998753 589999999999999999999999 9999999999999999999999999999987543
Q ss_pred CC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 561 SS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 561 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
.. .....+||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+....+..+..
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--------~~~~~~i~~~~~~~p~~- 256 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE--------GLIFAKIIKLEYDFPEK- 256 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCCCTT-
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCCCCCcc-
Confidence 32 34567899999999999999999999999999999999999999974322 12223333334444332
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTV 667 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v 667 (673)
.+.++.+++.+||+.||++|||++|+
T Consensus 257 ---~s~~~~dli~~lL~~dp~~R~t~~e~ 282 (311)
T 4aw0_A 257 ---FFPKARDLVEKLLVLDATKRLGCEEM 282 (311)
T ss_dssp ---CCHHHHHHHHHHSCSSGGGSTTSGGG
T ss_pred ---cCHHHHHHHHHHccCCHhHCcChHHH
Confidence 23458899999999999999999886
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-52 Score=412.07 Aligned_cols=248 Identities=23% Similarity=0.345 Sum_probs=194.3
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|+.. +|+.||||++.+....+....+.+.+|++++++++|||||++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 57999999999999999999764 69999999997765555555678999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+ +|+|.+++...+ .+++.++..++.||+.||+|||++ +|+||||||+||++++++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD---KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp ECC-CEEHHHHHHHSC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred eCC-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 999 679999998764 589999999999999999999999 9999999999999999999999999999876443
Q ss_pred CCCceecccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.......||+.|||||++.+..+ +.++||||+||++|||+||+.||..... ......+.......+..
T Consensus 166 -~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~--------~~~~~~i~~~~~~~p~~-- 234 (275)
T 3hyh_A 166 -NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--------PVLFKNISNGVYTLPKF-- 234 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCCCTT--
T ss_pred -CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHcCCCCCCCC--
Confidence 23345789999999999998876 5799999999999999999999974322 11122223333333322
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.++.+++.+||+.||++|||++|+++
T Consensus 235 --~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 235 --LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp --SCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred --CCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 2345889999999999999999999986
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-52 Score=433.81 Aligned_cols=249 Identities=26% Similarity=0.374 Sum_probs=210.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+.|+..+.||+|+||+||+|++. +|+.||||++...... ..+.+.+|+.+|+.++|||||++++++.+++..|+||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS---SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh---HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 56999999999999999999775 6999999999754322 2456889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|||+||+|.++++.. .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 228 Ey~~gG~L~~~i~~~----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~ 300 (423)
T 4fie_A 228 EFLEGGALTDIVTHT----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300 (423)
T ss_dssp ECCTTEEHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSS
T ss_pred eCCCCCcHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCC
Confidence 999999999999764 388999999999999999999999 9999999999999999999999999999988766
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.......+||+.|||||++.+..|+.++||||+||++|||++|+.||......+... .......+.+.. +.
T Consensus 301 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~-----~i~~~~~~~~~~----~~ 371 (423)
T 4fie_A 301 VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-----MIRDNLPPRLKN----LH 371 (423)
T ss_dssp CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-----HHHHSCCCCCSC----TT
T ss_pred CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH-----HHHcCCCCCCcc----cc
Confidence 566677889999999999999999999999999999999999999997433221110 111111122221 22
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.++.+++.+||+.||++|||++|+++
T Consensus 372 ~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 372 KVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp SSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 33456889999999999999999999975
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-52 Score=423.42 Aligned_cols=248 Identities=23% Similarity=0.261 Sum_probs=202.0
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+.|+..+.||+|+||+||+|++. +|+.||||+++.... ..+|+.++++++|||||++++++.+++..|+||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivm 129 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFM 129 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 45777889999999999999775 699999999875321 236999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-ceEEecccceeecCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-EARVSDFGIAKFLKP 559 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~~~~ 559 (673)
|||+||+|.++++..+ .+++.++..++.||+.||+|||++ +|+||||||+|||++.++ .+||+|||+|+.+..
T Consensus 130 Ey~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~ 203 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQMG---CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQP 203 (336)
T ss_dssp CCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred eccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence 9999999999998753 589999999999999999999999 999999999999999987 699999999998754
Q ss_pred CCCC-----ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCC
Q 005864 560 GSSN-----WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 560 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
.... .....||+.|||||++.+..|+.++||||+||++|||+||+.||......+ ....+.....+.
T Consensus 204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~--------~~~~i~~~~~~~ 275 (336)
T 4g3f_A 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP--------LCLKIASEPPPI 275 (336)
T ss_dssp ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC--------CHHHHHHSCCGG
T ss_pred CCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--------HHHHHHcCCCCc
Confidence 3221 233579999999999999999999999999999999999999997432211 111111111110
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+...+..+.+++.+||+.||++|||+.|+++.|.
T Consensus 276 -~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~ 312 (336)
T 4g3f_A 276 -REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVG 312 (336)
T ss_dssp -GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHH
Confidence 0111233456889999999999999999999998764
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-52 Score=412.30 Aligned_cols=248 Identities=23% Similarity=0.357 Sum_probs=198.6
Q ss_pred CccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec----CCeeeEE
Q 005864 405 DAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH----PRHSFLV 479 (673)
Q Consensus 405 ~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv 479 (673)
++.+.||+|+||+||+|.+. +++.||+|++...... ....+.|.+|++++++++|||||+++++|.+ ++..++|
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 56678999999999999765 6899999999765333 3346789999999999999999999999864 3567999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-CCceEEecccceeecC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-EYEARVSDFGIAKFLK 558 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~~ 558 (673)
||||++|+|.+++++. ..+++..+..++.||+.||+|||++.. +|+||||||+|||++. ++.+||+|||+|+...
T Consensus 108 mEy~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~~~-~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTSSS-CCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCC-CEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 9999999999999875 358899999999999999999999811 3999999999999984 7899999999997543
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
........||+.|||||++.+ .|+.++|||||||++|||+||+.||....... .....+.....+ ...
T Consensus 184 --~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~-------~~~~~i~~~~~~--~~~ 251 (290)
T 3fpq_A 184 --ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA-------QIYRRVTSGVKP--ASF 251 (290)
T ss_dssp --TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-------HHHHHHTTTCCC--GGG
T ss_pred --CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH-------HHHHHHHcCCCC--CCC
Confidence 234456789999999998864 69999999999999999999999996432111 111111111111 111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.++.+++.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 252 DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1223346889999999999999999999986
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-52 Score=418.53 Aligned_cols=249 Identities=24% Similarity=0.298 Sum_probs=201.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
++|++.+.||+|+||+||+|+.. +++.||||+++....... ....+.+|++++++++|||||++++++.+++..|
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE-ECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH-HHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 46999999999999999999752 478999999976533222 2346888999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+|||||+||+|.+++.+.+ .+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+..
T Consensus 103 ivmEy~~gg~L~~~l~~~~---~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EEECCCTTCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEEcCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 9999999999999998753 589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 558 KPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
...........||+.|||||++.+..|+.++||||+||++|||+||+.||...... .....+.......+..
T Consensus 177 ~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~--------~~~~~i~~~~~~~p~~ 248 (304)
T 3ubd_A 177 IDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK--------ETMTMILKAKLGMPQF 248 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCTT
T ss_pred cCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH--------HHHHHHHcCCCCCCCc
Confidence 55445556678999999999999999999999999999999999999999743221 2222333333443332
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCH-----HHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTM-----QTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~-----~~v~~ 669 (673)
.+.++.+++.+||+.||++|||+ +|+++
T Consensus 249 ----~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 249 ----LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp ----SCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred ----CCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 34468899999999999999984 67653
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-52 Score=426.14 Aligned_cols=262 Identities=23% Similarity=0.352 Sum_probs=212.1
Q ss_pred HHHHHHhcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCC-Cccccee
Q 005864 395 EEIIRATKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH-RNIVKFY 467 (673)
Q Consensus 395 ~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~ 467 (673)
.+++...++|++.+.||+|+||+||+|.+. .++.||||+++.... ....+.|.+|+++|.+++| ||||+++
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~--~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT--HSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC--hHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 345555678999999999999999999753 246899999876432 3346789999999999965 8999999
Q ss_pred eeeecC-CeeeEEEecccCCChHHHHhcCCC-------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecC
Q 005864 468 GFCSHP-RHSFLVYECLERGSLAEILSNDGS-------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDI 533 (673)
Q Consensus 468 ~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl 533 (673)
|+|.++ +..++|||||++|+|.++|+.... ...++|..+..++.|||+||+|||++ +||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCcc
Confidence 999764 568999999999999999976421 23589999999999999999999999 9999999
Q ss_pred CCCCeEeCCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccc
Q 005864 534 SSKNVLLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFI 610 (673)
Q Consensus 534 k~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~ 610 (673)
||+|||+++++.+||+|||+|+.+...... .....||+.|||||++.+..|+.++|||||||++|||+| |+.||...
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~ 291 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 291 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999876544332 234578999999999999999999999999999999998 99999754
Q ss_pred ccccccccccccccccccC-CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 611 SLLSSSSSNMNLSLNEILD-PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+. ....+.+ .+++.|.. .+.++.+++.+||+.||++||||+|+++.|+
T Consensus 292 ~~~~~-------~~~~i~~g~~~~~p~~----~~~~~~~li~~c~~~dP~~RPt~~eil~~L~ 343 (353)
T 4ase_A 292 KIDEE-------FCRRLKEGTRMRAPDY----TTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 343 (353)
T ss_dssp CCSHH-------HHHHHHHTCCCCCCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CHHHH-------HHHHHHcCCCCCCCcc----CCHHHHHHHHHHcCcChhHCcCHHHHHHHHH
Confidence 32111 0111111 12333322 2346889999999999999999999999885
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-51 Score=416.10 Aligned_cols=262 Identities=24% Similarity=0.302 Sum_probs=199.6
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC----eee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR----HSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~ 477 (673)
++|.+.+.||+|+||+||+|++ +|+.||||++..... ....+..|+..+.+++|||||+++|+|.+++ ..+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~----~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~ 77 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch----hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEE
Confidence 4567789999999999999988 689999999865321 1223445677778899999999999998654 579
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcC-----CCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDC-----FPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
+|||||++|+|.++++.. .++|..+.+++.|+|+||+|||+++ .++|+||||||+|||++.++.+||+|||
T Consensus 78 lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 78 LVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 999999999999999864 4899999999999999999999762 3589999999999999999999999999
Q ss_pred ceeecCCCCCC----ceecccccccccccccccC------CcCcchhHHHHHHHHHHHHhCCCCCccccccccccc----
Q 005864 553 IAKFLKPGSSN----WTEFAGTFGYVAPELAYTM------KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS---- 618 (673)
Q Consensus 553 ~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~---- 618 (673)
+|+........ .....||+.|||||++.+. .++.++|||||||++|||+||..||......+....
T Consensus 154 la~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~ 233 (303)
T 3hmm_A 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp TCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSC
T ss_pred CCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccc
Confidence 99887554332 2345799999999998754 477899999999999999999988754322111000
Q ss_pred ---ccccccccccCCCCC--CCCc-chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 619 ---NMNLSLNEILDPRLP--LPSR-NIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 619 ---~~~~~~~~~~~~~~~--~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
........+....+. .+.. ...+.+..+.+++.+||+.||++||||.||++.|+
T Consensus 234 ~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 293 (303)
T 3hmm_A 234 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 293 (303)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHH
T ss_pred ccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence 001111112222221 1111 12345667899999999999999999999999986
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-51 Score=407.21 Aligned_cols=250 Identities=20% Similarity=0.367 Sum_probs=195.2
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC------
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR------ 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 474 (673)
++|++.+.||+|+||+||+|++. +|+.||||+++... .....+.+.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 46899999999999999999764 79999999987543 2334678999999999999999999999986544
Q ss_pred ------eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEE
Q 005864 475 ------HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARV 548 (673)
Q Consensus 475 ------~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 548 (673)
..|+|||||++|+|.+++.........++..+..++.||++||+|||++ +|+||||||+|||++.++.+||
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEE
Confidence 3689999999999999999876656677788899999999999999999 9999999999999999999999
Q ss_pred ecccceeecCCCCC------------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccc
Q 005864 549 SDFGIAKFLKPGSS------------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS 616 (673)
Q Consensus 549 ~Dfg~~~~~~~~~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~ 616 (673)
+|||+|+.+..... ..+..+||+.|||||++.+..|+.++||||+||++|||++ ||.....
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~---- 232 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME---- 232 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH----
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH----
Confidence 99999987754322 1233579999999999999999999999999999999996 7653211
Q ss_pred ccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 617 SSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.......+.....+ ...........+++.+||+.||++|||+.|+++
T Consensus 233 ---~~~~~~~~~~~~~p---~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 233 ---RVRTLTDVRNLKFP---PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp ---HHHHHHHHHTTCCC---HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---HHHHHHHHhcCCCC---CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00111112222222 233444556788999999999999999999986
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-47 Score=398.32 Aligned_cols=260 Identities=20% Similarity=0.303 Sum_probs=201.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec------CC
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH------PR 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~ 474 (673)
++|++.+.||+|+||+||+|++. +|+.||||+++..... ....+.+.+|+++|+.++|||||++++++.. .+
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSS-HHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccc-hHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 57999999999999999999764 7999999999764322 3346778899999999999999999998754 35
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..|+|||||+ |+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~---~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSS---QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSS---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEeCCC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 7899999996 5899999865 3589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCC----CCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------ccc
Q 005864 555 KFLKPG----SSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNL 622 (673)
Q Consensus 555 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~ 622 (673)
+.+... .......+||+.|||||++.+. .++.++||||+||++|||++|+.||......+..... ...
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPA 285 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGG
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChH
Confidence 866432 2233457899999999998775 4689999999999999999999999754322110000 000
Q ss_pred cc--------ccccCCCCCCCCcch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 623 SL--------NEILDPRLPLPSRNI----QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 623 ~~--------~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.. ...+..........+ ...+.++.+|+.+||..||++|||++|+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00 000000000001111 112356889999999999999999999875
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-46 Score=387.54 Aligned_cols=200 Identities=26% Similarity=0.338 Sum_probs=171.2
Q ss_pred HHHHHHhcCCCccceeccCCcEEEEEEEeC----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeee
Q 005864 395 EEIIRATKNFDAEQCIGIGGQASVYRGELP----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGF 469 (673)
Q Consensus 395 ~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 469 (673)
+.+....+.|++.+.||+|+||+||+|+.+ +++.||+|++.... ...++.+|++++..+ +|||||+++++
T Consensus 14 ~~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~ 88 (361)
T 4f9c_A 14 EAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYC 88 (361)
T ss_dssp HHSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEE
T ss_pred HhcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEE
Confidence 344445678999999999999999999653 57889999886532 235678899999998 69999999999
Q ss_pred eecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-CceEE
Q 005864 470 CSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARV 548 (673)
Q Consensus 470 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl 548 (673)
+.+++..++||||+++|+|.++++ .+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||
T Consensus 89 ~~~~~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl 159 (361)
T 4f9c_A 89 FRKNDHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYAL 159 (361)
T ss_dssp EEETTEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEE
T ss_pred EEECCEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEE
Confidence 999999999999999999999984 378899999999999999999999 99999999999999876 79999
Q ss_pred ecccceeecCCCCC----------------------------CceecccccccccccccccC-CcCcchhHHHHHHHHHH
Q 005864 549 SDFGIAKFLKPGSS----------------------------NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALE 599 (673)
Q Consensus 549 ~Dfg~~~~~~~~~~----------------------------~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~e 599 (673)
+|||+|+....... ..+..+||+.|+|||++.+. .++.++||||+||++||
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~e 239 (361)
T 4f9c_A 160 VDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLS 239 (361)
T ss_dssp CCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHH
T ss_pred CcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHH
Confidence 99999986543211 12345799999999998775 48999999999999999
Q ss_pred HHhCCCCCc
Q 005864 600 VIKGKHPRD 608 (673)
Q Consensus 600 l~~g~~p~~ 608 (673)
|++|+.||.
T Consensus 240 ll~G~~Pf~ 248 (361)
T 4f9c_A 240 LLSGRYPFY 248 (361)
T ss_dssp HHHTCSSSS
T ss_pred HHHCCCCCC
Confidence 999999985
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-46 Score=408.31 Aligned_cols=251 Identities=21% Similarity=0.302 Sum_probs=213.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|..+ +|+.||+|++..... ...+.+.+|+.+|+.++|||||++++++.+++..++||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~---~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~ 233 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE---SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccch---hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 57999999999999999999765 699999999876432 23567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC--CceEEecccceeecC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE--YEARVSDFGIAKFLK 558 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~--~~~kl~Dfg~~~~~~ 558 (673)
|||+||+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+.
T Consensus 234 E~~~gg~L~~~i~~~~--~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 234 EFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp ECCCCCBHHHHHTCTT--SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred eecCCCcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 9999999999997543 4589999999999999999999999 99999999999999854 789999999999875
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
.. .......||+.|||||++.+..|+.++||||+||++|||++|+.||..... ......+.......+...
T Consensus 309 ~~-~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~--------~~~~~~i~~~~~~~~~~~ 379 (573)
T 3uto_A 309 PK-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--------DETLRNVKSCDWNMDDSA 379 (573)
T ss_dssp TT-SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHHHTTCCCCCSGG
T ss_pred CC-CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--------HHHHHHHHhCCCCCCccc
Confidence 43 334557899999999999999999999999999999999999999974322 122233333333333344
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+...+.++.+|+.+||+.||.+|||++|+++
T Consensus 380 ~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 380 FSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 4445567899999999999999999999986
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-46 Score=404.30 Aligned_cols=251 Identities=21% Similarity=0.237 Sum_probs=203.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHH---HHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQR---EFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~---~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
++|++.+.||+|+||+||+|+.. +|+.||||++.+.......... ....++.+++.++|||||++++++.+++..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 57999999999999999999775 6999999999765433322223 3344567778889999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+|||||+||+|.+++...+ .+++..+..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+
T Consensus 269 lVmEy~~GGdL~~~l~~~~---~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEECCCCSCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeec
Confidence 9999999999999998753 489999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCC
Q 005864 558 KPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
... .....+||+.|||||++.. ..|+.++|+||+||++|||++|+.||....... .......+.......+.
T Consensus 343 ~~~--~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~-----~~~i~~~i~~~~~~~p~ 415 (689)
T 3v5w_A 343 SKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-----KHEIDRMTLTMAVELPD 415 (689)
T ss_dssp SSC--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC-----HHHHHHHHHHCCCCCCT
T ss_pred CCC--CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHHHhhcCCCCCCCc
Confidence 543 2345689999999999964 579999999999999999999999997432211 11112222233333332
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPT-----MQTVCQ 669 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps-----~~~v~~ 669 (673)
..+.++.+++.+||+.||++|++ ++|+++
T Consensus 416 ----~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 416 ----SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp ----TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred ----cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 23456889999999999999998 677653
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-45 Score=375.22 Aligned_cols=280 Identities=33% Similarity=0.590 Sum_probs=229.9
Q ss_pred CcccHHHHHHHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeee
Q 005864 390 GKIVYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGF 469 (673)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 469 (673)
..+++.++....++|++.+.||+|+||+||+|+..+|+.||||++....... ....+.+|++++..++||||++++++
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG--GELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-------CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCch--HHHHHHHHHHHHHhccCCCccceEEE
Confidence 3567889999999999999999999999999998889999999987643221 23368899999999999999999999
Q ss_pred eecCCeeeEEEecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEE
Q 005864 470 CSHPRHSFLVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARV 548 (673)
Q Consensus 470 ~~~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 548 (673)
+..++..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+||
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 999999999999999999999998754 2345899999999999999999999987678999999999999999999999
Q ss_pred ecccceeecCCCCCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc--------
Q 005864 549 SDFGIAKFLKPGSSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------- 619 (673)
Q Consensus 549 ~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------- 619 (673)
+|||++......... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||+...........
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred ccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 999999877543332 33456899999999999889999999999999999999999999743322111100
Q ss_pred -cccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 620 -MNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 620 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.........+..... ......+..+.+++.+||+.||++|||++||++.|++
T Consensus 256 ~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 256 LKEKKLEALVDVDLQG--NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TSSCCSTTSSCTTCTT--SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred hhchhhhhhcChhhcc--ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 112223333333332 3446677889999999999999999999999999963
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-45 Score=370.40 Aligned_cols=264 Identities=29% Similarity=0.434 Sum_probs=205.5
Q ss_pred HHHHHHHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC
Q 005864 394 YEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP 473 (673)
Q Consensus 394 ~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 473 (673)
..++.....+|++.+.||+|+||+||+|+. .|+.||||++..... .....+.+.+|++++++++||||+++++++.++
T Consensus 29 ~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 106 (309)
T 3p86_A 29 GDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP 106 (309)
T ss_dssp ---CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCC-SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred cccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence 334444467899999999999999999987 688999999876533 233467899999999999999999999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCC--eEEecCCCCCeEeCCCCceEEecc
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPP--IVHRDISSKNVLLSSEYEARVSDF 551 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Df 551 (673)
+..++||||+++|+|.+++...+....+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+||
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Df 183 (309)
T 3p86_A 107 PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDF 183 (309)
T ss_dssp TCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCC
T ss_pred CceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCC
Confidence 99999999999999999998765444589999999999999999999999 8 999999999999999999999999
Q ss_pred cceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
|+++.............||+.|+|||.+.+..++.++||||||+++|||++|+.||......+.... .......
T Consensus 184 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~------~~~~~~~ 257 (309)
T 3p86_A 184 GLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAA------VGFKCKR 257 (309)
T ss_dssp C-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHH------HHHSCCC
T ss_pred CCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH------HHhcCCC
Confidence 9998655443344556799999999999999999999999999999999999999974332111000 0001112
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+. ..+.++.+++.+||+.||++|||++|+++.|+
T Consensus 258 ~~~~~----~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~ 294 (309)
T 3p86_A 258 LEIPR----NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294 (309)
T ss_dssp CCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 22222 22345889999999999999999999999886
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-44 Score=368.37 Aligned_cols=271 Identities=33% Similarity=0.479 Sum_probs=222.1
Q ss_pred HHHHHHHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC
Q 005864 394 YEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP 473 (673)
Q Consensus 394 ~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 473 (673)
+.++..++++|+..+.||+|+||+||+|.+.+|+.||||++.... ....+.+.+|+.+++.++||||+++++++.++
T Consensus 31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES---SQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC---SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC---hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 334455678999999999999999999998889999999886542 23467899999999999999999999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCC-CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 474 RHSFLVYECLERGSLAEILSNDGS-IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
+..++||||+++|+|.+++..... ...+++..+..++.|+++||+|||++ +++||||||+||+++.++.+||+|||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCT
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecc
Confidence 999999999999999999976532 23589999999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-------ccccc
Q 005864 553 IAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-------NMNLS 623 (673)
Q Consensus 553 ~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-------~~~~~ 623 (673)
++........ ......||+.|+|||.+.+..++.++||||||+++|||++|+.||......+.... .....
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 264 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence 9987543222 22345689999999999988999999999999999999999999874332111100 01112
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 624 LNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
....+++.... ......+..+.+++.+||+.||++|||++|+++.|+
T Consensus 265 ~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 311 (321)
T 2qkw_B 265 LEQIVDPNLAD--KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311 (321)
T ss_dssp CCSSSSSSCTT--CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhcChhhcc--ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 23333443332 234567788999999999999999999999999986
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-44 Score=363.14 Aligned_cols=250 Identities=25% Similarity=0.376 Sum_probs=209.4
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||+||+|.. .+|+.||||++...... ..+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc---HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 36799999999999999999976 57999999998654322 356788999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 96 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 168 (297)
T ss_dssp EECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred EECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 9999999999999864 378899999999999999999999 999999999999999999999999999988766
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.........||+.|+|||.+.+..++.++||||+|+++|||++|+.||........... ......+.... .
T Consensus 169 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-----~~~~~~~~~~~----~ 239 (297)
T 3fxz_A 169 EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL-----IATNGTPELQN----P 239 (297)
T ss_dssp TTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-----HHHHCSCCCSC----G
T ss_pred cccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-----HHhCCCCCCCC----c
Confidence 55555667899999999999999999999999999999999999999974332211000 00001111111 1
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+..+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 240 EKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred cccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 233456889999999999999999999975
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=364.67 Aligned_cols=250 Identities=21% Similarity=0.255 Sum_probs=210.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|+.. +|+.||+|+++............+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57889999999999999999775 69999999997654434445678899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 85 EYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp ECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 999999999999765 3488899999999999999999999 9999999999999999999999999999865444
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+..
T Consensus 159 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~~~~~p~~--- 227 (337)
T 1o6l_A 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------RLFELILMEEIRFPRT--- 227 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCTT---
T ss_pred CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH--------HHHHHHHcCCCCCCCC---
Confidence 44455678999999999999999999999999999999999999999743221 1112222223333322
Q ss_pred HHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.+.++.+++.+||+.||++|| +++|+++
T Consensus 228 -~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 228 -LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp -SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 234588999999999999999 8999875
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=363.10 Aligned_cols=261 Identities=25% Similarity=0.356 Sum_probs=215.0
Q ss_pred CcccHHHHHHHhcC----------CCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc
Q 005864 390 GKIVYEEIIRATKN----------FDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI 458 (673)
Q Consensus 390 ~~~~~~~~~~~~~~----------~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l 458 (673)
+.++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+.+++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l 99 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ---QRRELLFNEVVIMRDY 99 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---CSHHHHHHHHHHHTTC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch---hHHHHHHHHHHHHHhC
Confidence 45778888887764 677789999999999999876 799999999865432 2356788999999999
Q ss_pred CCCcccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCe
Q 005864 459 RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNV 538 (673)
Q Consensus 459 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 538 (673)
+||||+++++++..++..++||||+++|+|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||
T Consensus 100 ~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NI 172 (321)
T 2c30_A 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSI 172 (321)
T ss_dssp CCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGE
T ss_pred CCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHE
Confidence 9999999999999999999999999999999998753 489999999999999999999999 999999999999
Q ss_pred EeCCCCceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc
Q 005864 539 LLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS 618 (673)
Q Consensus 539 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~ 618 (673)
+++.++.+||+|||++..............||+.|+|||++.+..++.++||||||+++|||++|+.||......+..
T Consensus 173 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~-- 250 (321)
T 2c30_A 173 LLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM-- 250 (321)
T ss_dssp EECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH--
T ss_pred EECCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--
Confidence 999999999999999988765544455678999999999999999999999999999999999999998743221110
Q ss_pred ccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 619 NMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........+... .....+..+.+++.+||+.||++|||++|+++
T Consensus 251 ---~~~~~~~~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 251 ---KRLRDSPPPKLK----NSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp ---HHHHHSSCCCCT----TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---HHHhcCCCCCcC----ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011111111111 11223456889999999999999999999986
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-44 Score=364.65 Aligned_cols=249 Identities=24% Similarity=0.390 Sum_probs=209.0
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||.||+|.+ .+|+.||||++..... .....+.+.+|+.+++.++||||+++++++..++..++|
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 35799999999999999999977 5799999999876533 233467788999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 93 ~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHG---RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp ECCCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred EECCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 99999999999997653 488899999999999999999999 999999999999999999999999999986654
Q ss_pred CCCCceecccccccccccccccCCcC-cchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
. .......||+.|+|||.+.+..++ .++||||+||++|||++|+.||+..... .....+.......+..
T Consensus 167 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~i~~~~~~~p~~- 236 (328)
T 3fe3_A 167 G-GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK--------ELRERVLRGKYRIPFY- 236 (328)
T ss_dssp S-CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCTT-
T ss_pred C-CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCCC-
Confidence 3 234556799999999999888765 7999999999999999999999743221 1122223333333322
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.++.+++.+||+.||.+|||++|+++
T Consensus 237 ---~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 237 ---MSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp ---SCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred ---CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 2345889999999999999999999975
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-43 Score=355.39 Aligned_cols=276 Identities=31% Similarity=0.511 Sum_probs=225.7
Q ss_pred CcccHHHHHHHhcCCCcc------ceeccCCcEEEEEEEeCCCCEEEEEeeccchh-hhhHHHHHHHHHHHHHhccCCCc
Q 005864 390 GKIVYEEIIRATKNFDAE------QCIGIGGQASVYRGELPSGEVVAVKKFHSLLL-SEISVQREFLNEIKALTEIRHRN 462 (673)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~------~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~n 462 (673)
..+++.++..+++.|+.. +.||+|+||+||+|.. +++.||||++..... ......+.+.+|+.++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 457889999999998877 8999999999999987 689999999875432 22345678999999999999999
Q ss_pred ccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC
Q 005864 463 IVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS 542 (673)
Q Consensus 463 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 542 (673)
|+++++++.+++..++||||+++|+|.+++........+++..+..++.|++.||+|||+. +++||||||+||++++
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcC
Confidence 9999999999999999999999999999998654445689999999999999999999999 9999999999999999
Q ss_pred CCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc--
Q 005864 543 EYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-- 618 (673)
Q Consensus 543 ~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-- 618 (673)
++.+||+|||++......... .....|++.|+|||.+.+ .++.++||||||+++|||++|+.||+..........
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 247 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIK 247 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHH
Confidence 999999999999876543222 233568999999998765 589999999999999999999999975432211100
Q ss_pred ----ccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 619 ----NMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 619 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.......+.+++.+.. .....+..+.+++.+||+.||.+|||++++++.|++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~ 303 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKMND---ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQE 303 (307)
T ss_dssp HHHHTTSCCHHHHSCSSCSC---CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred HHhhhhhhhhhhhccccccc---cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 0011122333444332 334667789999999999999999999999999863
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-43 Score=357.26 Aligned_cols=254 Identities=25% Similarity=0.436 Sum_probs=206.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||+|+||+||+|.+. +|+.||+|++... .....+.+.+|++++.+++||||+++++++.+++..++||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 86 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT 86 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEE
Confidence 56888999999999999999775 6999999988543 3345678999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.++++... ..+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 87 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 87 EYIKGGTLRGIIKSMD--SQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp ECCTTCBHHHHHHHCC--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred EecCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 9999999999998753 4589999999999999999999999 9999999999999999999999999999876443
Q ss_pred CCCc--------------eecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccc
Q 005864 561 SSNW--------------TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNE 626 (673)
Q Consensus 561 ~~~~--------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 626 (673)
.... ....||+.|+|||++.+..++.++||||||+++|||++|..||.......... ......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~---~~~~~~ 238 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF---GLNVRG 238 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS---SBCHHH
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH---hhhhhc
Confidence 2211 14578999999999999999999999999999999999999986432211100 001111
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 627 ILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+...+ ...+..+.+++.+||+.||++|||++|+++.|+
T Consensus 239 ~~~~~~~------~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~ 278 (310)
T 3s95_A 239 FLDRYCP------PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLE 278 (310)
T ss_dssp HHHHTCC------TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cccccCC------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111111 011234889999999999999999999999886
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=366.27 Aligned_cols=254 Identities=21% Similarity=0.291 Sum_probs=211.5
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhh---HHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEI---SVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
.+.|++.+.||+|+||+||+|... +|+.||+|.++....... ...+.+.+|+.++..++||||+++++++.+++..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 357899999999999999999775 699999999876533211 1356789999999999999999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC----ceEEeccc
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY----EARVSDFG 552 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg 552 (673)
++||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG 164 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred EEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence 9999999999999999764 3589999999999999999999999 999999999999998876 79999999
Q ss_pred ceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCC
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRL 632 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (673)
++....... ......||+.|+|||++.+..++.++||||+||++|+|++|..||..... ......+.....
T Consensus 165 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~--------~~~~~~i~~~~~ 235 (361)
T 2yab_A 165 LAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--------QETLANITAVSY 235 (361)
T ss_dssp SCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--------HHHHHHHHTTCC
T ss_pred CceEcCCCC-ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhcCC
Confidence 998875432 33456799999999999998999999999999999999999999974321 112223333333
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+...+...+..+.+++.+||..||++|||+.|+++
T Consensus 236 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 236 DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 3333333344567899999999999999999999985
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-43 Score=400.32 Aligned_cols=326 Identities=34% Similarity=0.521 Sum_probs=287.9
Q ss_pred CCccccCCCcccCCC-CCCEEEeeCCccccCCCccccC--CCCCCEEEcccCccccccCccccCCCCCcEEEccCccccc
Q 005864 2 NHLSGAIPPSVGNFT-NLKGLYLYSNSLSGSVPGEIGN--LMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTG 78 (673)
Q Consensus 2 n~i~~~~p~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~--l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~ 78 (673)
|++++.+|..+.+++ +|++|+|++|.+++..|..+.. +++|++|++++|++++..|..|.++++|++|+|++|++++
T Consensus 353 n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 432 (768)
T 3rgz_A 353 NEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSG 432 (768)
T ss_dssp SEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEES
T ss_pred CccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccC
Confidence 556666666666665 6666666666666666666655 6778888888888888888889999999999999999988
Q ss_pred ccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccC
Q 005864 79 NISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGN 158 (673)
Q Consensus 79 ~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~ 158 (673)
..+..|..+++|++|+|++|.+.+..+..+..+++|+.|++++|.+++..|..+..+++|++|++++|++++.+|..+..
T Consensus 433 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 512 (768)
T 3rgz_A 433 TIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGR 512 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGG
T ss_pred cccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhc
Confidence 88888999999999999999998888888999999999999999999889999999999999999999999889999999
Q ss_pred CCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccc----------------------------------
Q 005864 159 LKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETL---------------------------------- 204 (673)
Q Consensus 159 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l---------------------------------- 204 (673)
+++|+.|+|++|++++.+|..+..+++|+.|++++|.+++.+|..+
T Consensus 513 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (768)
T 3rgz_A 513 LENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGN 592 (768)
T ss_dssp CTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEE
T ss_pred CCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999998887766543
Q ss_pred ------------------------------------cccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCC
Q 005864 205 ------------------------------------GNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEI 248 (673)
Q Consensus 205 ------------------------------------~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~ 248 (673)
..+++|+.|+|++|++++.+|..++.+++|+.|+|++|.+++.+
T Consensus 593 ~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~i 672 (768)
T 3rgz_A 593 LLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSI 672 (768)
T ss_dssp EEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCC
T ss_pred ccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCC
Confidence 33567899999999999999999999999999999999999999
Q ss_pred cccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCcccccCccccccCCcCCCCCCCCCccccc
Q 005864 249 PPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCGDVEGFQSCKA 328 (673)
Q Consensus 249 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~~~~~~~~ 328 (673)
|..++++++|+.|+|++|+++|.+|..+..++.|++||+++|+++|.+|....+...+..++.||+++||.|.. .|..
T Consensus 673 p~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~--~C~~ 750 (768)
T 3rgz_A 673 PDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP--RCDP 750 (768)
T ss_dssp CGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC--CCCS
T ss_pred ChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc--CCCC
Confidence 99999999999999999999999999999999999999999999999999999999899999999999998743 6755
Q ss_pred c
Q 005864 329 F 329 (673)
Q Consensus 329 ~ 329 (673)
.
T Consensus 751 ~ 751 (768)
T 3rgz_A 751 S 751 (768)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=375.66 Aligned_cols=255 Identities=22% Similarity=0.294 Sum_probs=212.2
Q ss_pred HhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
..++|++.+.||+|+||+||+|.. .+|+.||+|++...... ....+.+.+|+.+++.++||||+++++++.+++..++
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLS-ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCH-HHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 456799999999999999999966 47999999998765433 2346778999999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeC---CCCceEEeccccee
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS---SEYEARVSDFGIAK 555 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~~~ 555 (673)
||||+++|+|.+.+...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++ .++.+||+|||++.
T Consensus 88 v~E~~~gg~L~~~i~~~~---~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 88 IFDLVTGGELFEDIVARE---YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp EECCCBCCBHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 999999999999998753 488999999999999999999999 999999999999998 46789999999998
Q ss_pred ecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC
Q 005864 556 FLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635 (673)
Q Consensus 556 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
.............||+.|+|||++.+..++.++||||+||++|+|++|..||..... ......+.......+
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~--------~~~~~~i~~~~~~~~ 233 (444)
T 3soa_A 162 EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ--------HRLYQQIKAGAYDFP 233 (444)
T ss_dssp CCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH--------HHHHHHHHHTCCCCC
T ss_pred EecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH--------HHHHHHHHhCCCCCC
Confidence 776555555667899999999999998999999999999999999999999864321 111222233333333
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+...+.++.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 234 SPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 3333344567899999999999999999999986
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-43 Score=367.02 Aligned_cols=254 Identities=22% Similarity=0.370 Sum_probs=208.4
Q ss_pred cCCCccceeccCCcEEEEEEEe--------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeec
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL--------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSH 472 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 472 (673)
++|++.+.||+|+||+||+|++ .++..||||+++... .....+.+.+|+++++++ +||||+++++++.+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 5788999999999999999975 245679999987542 334567899999999999 89999999999999
Q ss_pred CCeeeEEEecccCCChHHHHhcCCC-------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeE
Q 005864 473 PRHSFLVYECLERGSLAEILSNDGS-------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVL 539 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil 539 (673)
++..++||||+++|+|.+++...+. ...+++..+..++.||+.||+|||++ +|+||||||+||+
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEE
Confidence 9999999999999999999986542 23478999999999999999999999 9999999999999
Q ss_pred eCCCCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccc
Q 005864 540 LSSEYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSS 616 (673)
Q Consensus 540 l~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~ 616 (673)
++.++.+||+|||+++....... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||......+
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~-- 313 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE-- 313 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH--
Confidence 99999999999999987654332 2233456789999999999999999999999999999999 999987432211
Q ss_pred ccccccccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 617 SSNMNLSLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 617 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
....+... ....+. ..+.++.+++.+||+.||++|||+.|+++.|+
T Consensus 314 ------~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~ 360 (370)
T 2psq_A 314 ------LFKLLKEGHRMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 360 (370)
T ss_dssp ------HHHHHHTTCCCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ------HHHHHhcCCCCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111111 111121 23345889999999999999999999999986
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=362.19 Aligned_cols=251 Identities=21% Similarity=0.266 Sum_probs=210.4
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||+||+|... +|+.||+|.+.... .....+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG----TDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT----HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc----ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 357899999999999999999775 68899999986432 2356788999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC--CCceEEecccceeec
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS--EYEARVSDFGIAKFL 557 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~~ 557 (673)
|||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++...
T Consensus 80 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 80 FEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp ECCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred EEeCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence 99999999999997653 4589999999999999999999999 9999999999999987 789999999999887
Q ss_pred CCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 558 KPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
... .......||+.|+|||.+.+..++.++||||+|+++|||++|..||..... ......+.......+..
T Consensus 155 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~i~~~~~~~~~~ 225 (321)
T 1tki_A 155 KPG-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN--------QQIIENIMNAEYTFDEE 225 (321)
T ss_dssp CTT-CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHTCCCCCHH
T ss_pred CCC-CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH--------HHHHHHHHcCCCCCChh
Confidence 543 334556789999999999988899999999999999999999999974321 11222333333333322
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+...+.++.+++.+||+.||++|||+.|+++
T Consensus 226 ~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 226 AFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 33344567899999999999999999999986
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-44 Score=367.33 Aligned_cols=251 Identities=22% Similarity=0.313 Sum_probs=206.3
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 478 (673)
.++|++.+.||+|+||+||+|+.. +|+.||||+++..........+.+.+|..++..+ +||||+++++++.+++..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 468999999999999999999775 6899999999876444445567788999999998 69999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
||||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSR---RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 999999999999998753 488999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+..
T Consensus 176 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~~~~~~p~~- 246 (353)
T 3txo_A 176 CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE--------DDLFEAILNDEVVYPTW- 246 (353)
T ss_dssp C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCCTT-
T ss_pred cCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH--------HHHHHHHHcCCCCCCCC-
Confidence 444445567899999999999988999999999999999999999999974322 12223333334443332
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCH------HHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTM------QTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~------~~v~~ 669 (673)
.+..+.+++.+||+.||++||++ +|+++
T Consensus 247 ---~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 247 ---LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ---SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ---CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 23458899999999999999998 66653
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-43 Score=359.93 Aligned_cols=248 Identities=21% Similarity=0.326 Sum_probs=205.9
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||+|+||+||+|.+ .+|+.||+|++.............+.+|+.+++.++||||+++++++..++..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5789999999999999999976 579999999987654444344567899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+ +|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++......
T Consensus 89 E~~-~g~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK---RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp CCC-CEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred ECC-CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 999 679999987653 488999999999999999999999 9999999999999999999999999999866443
Q ss_pred CCCceecccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
. ......||+.|+|||.+.+..+ +.++||||+||++|||++|+.||+.... ......+.......+..
T Consensus 162 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--------~~~~~~i~~~~~~~p~~-- 230 (336)
T 3h4j_B 162 N-FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFI--------PNLFKKVNSCVYVMPDF-- 230 (336)
T ss_dssp B-TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSS--------TTCBCCCCSSCCCCCTT--
T ss_pred c-ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccH--------HHHHHHHHcCCCCCccc--
Confidence 2 3345679999999999988776 6899999999999999999999974321 11122222222222222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.++.+++.+||+.||.+|||++|+++
T Consensus 231 --~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 231 --LSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp --SCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred --CCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 2345889999999999999999999975
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-43 Score=358.62 Aligned_cols=252 Identities=26% Similarity=0.440 Sum_probs=204.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
++|++.+.||+|+||+||+|.+. .+..||||+++... .....+.+.+|+.++++++||||+++++++.+++..+
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 56888899999999999999874 34569999987542 2334678999999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++|+|.++++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 127 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRTHD--GQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EEeeCCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 9999999999999997653 4589999999999999999999999 9999999999999999999999999999987
Q ss_pred CCCCCCc---eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CC
Q 005864 558 KPGSSNW---TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RL 632 (673)
Q Consensus 558 ~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 632 (673)
....... ....+|+.|+|||++.+..++.++||||||+++|||++ |+.||......+. ...+... ..
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~--------~~~~~~~~~~ 273 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV--------ISSVEEGYRL 273 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH--------HHHHHTTCCC
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHH--------HHHHHcCCCC
Confidence 5433222 22345778999999998999999999999999999999 9999864322111 1111111 11
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+.+. ..+..+.+++.+||+.||++|||++|+++.|+
T Consensus 274 ~~~~----~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~ 309 (325)
T 3kul_A 274 PAPM----GCPHALHQLMLDCWHKDRAQRPRFSQIVSVLD 309 (325)
T ss_dssp CCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC----CcCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 2221 23346889999999999999999999999986
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-43 Score=366.63 Aligned_cols=254 Identities=22% Similarity=0.319 Sum_probs=205.9
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 478 (673)
.++|++.+.||+|+||+||+|+.+ +++.||+|++++.........+.+.+|..++.++ +||||+++++++.+++..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 357899999999999999999875 5889999999876544444556788999999887 89999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
||||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 131 V~E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~ 204 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL 204 (396)
T ss_dssp EEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEcCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecc
Confidence 999999999999998653 489999999999999999999999 99999999999999999999999999998644
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-cccccccccCCCCCCCCc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-MNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 637 (673)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||+.....+..... .......+.......+..
T Consensus 205 ~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 284 (396)
T 4dc2_A 205 RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 284 (396)
T ss_dssp CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTT
T ss_pred cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCc
Confidence 4444556678999999999999999999999999999999999999999643221111111 111122233334443332
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTM 664 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~ 664 (673)
.+.++.+++.+||+.||++||++
T Consensus 285 ----~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 285 ----LSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp ----SCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ----CCHHHHHHHHHHhcCCHhHcCCC
Confidence 23458899999999999999985
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=358.67 Aligned_cols=257 Identities=26% Similarity=0.349 Sum_probs=206.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|+.. +++.||+|.+...........+.+.+|+.++.+++||||+++++++.+++..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 57899999999999999999764 68999999986655455556788999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 91 e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHG---PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp ECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 9999999999998653 588999999999999999999999 9999999999999999999999999999865433
Q ss_pred CC-CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCC-CCcc
Q 005864 561 SS-NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL-PSRN 638 (673)
Q Consensus 561 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 638 (673)
.. ......||+.|+|||.+.+..++.++||||+|+++|||++|+.||......... ...+....+. +...
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~--------~~~~~~~~~~~~~~~ 236 (294)
T 4eqm_A 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA--------IKHIQDSVPNVTTDV 236 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH--------HHHHSSCCCCHHHHS
T ss_pred cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH--------HHHhhccCCCcchhc
Confidence 22 233456899999999999999999999999999999999999999743321110 0111111110 0011
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHhh
Q 005864 639 IQDKLISILEVALLCLEESPESRP-TMQTVCQLLC 672 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rp-s~~~v~~~L~ 672 (673)
....+..+.+++.+||+.||++|| +++++.+.|+
T Consensus 237 ~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~ 271 (294)
T 4eqm_A 237 RKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLS 271 (294)
T ss_dssp CTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHH
Confidence 122345688999999999999998 8999988875
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=367.24 Aligned_cols=257 Identities=21% Similarity=0.255 Sum_probs=209.8
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhh--hHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSE--ISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
.+.|++.+.||+|+||+||+|... +|+.||||++....... ....+.+.+|+.+++.++||||+++++++.+++..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 356999999999999999999764 69999999986543221 113577899999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc---eEEecccc
Q 005864 478 LVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE---ARVSDFGI 553 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~ 553 (673)
+||||+++|+|.+++.... ....+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 9999999999998886532 223588999999999999999999999 9999999999999987654 99999999
Q ss_pred eeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
+..............||+.|+|||++.+..++.++||||+||++|||++|+.||..... .....+......
T Consensus 180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---------~~~~~i~~~~~~ 250 (351)
T 3c0i_A 180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---------RLFEGIIKGKYK 250 (351)
T ss_dssp CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---------HHHHHHHHTCCC
T ss_pred eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---------HHHHHHHcCCCC
Confidence 99876554444556799999999999999999999999999999999999999974211 112222222333
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+...+...+.++.+++.+||+.||++|||+.|+++
T Consensus 251 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 251 MNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 222222334567899999999999999999999985
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=355.36 Aligned_cols=264 Identities=20% Similarity=0.286 Sum_probs=211.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC--eeeE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR--HSFL 478 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~l 478 (673)
++|.+.+.||+|+||+||+|... +|+.||||++...... ...+.+.+|++++++++||||+++++++.... ..++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG--SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 56889999999999999999775 5999999998754322 23567889999999999999999999997655 7799
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe----CCCCceEEecccce
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL----SSEYEARVSDFGIA 554 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfg~~ 554 (673)
||||+++|+|.+++........+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 999999999999998765444589999999999999999999999 99999999999999 77788999999999
Q ss_pred eecCCCCCCceecccccccccccccc--------cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccc-----
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAY--------TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN----- 621 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~--------~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~----- 621 (673)
+...... ......||+.|+|||++. +..++.++|||||||++|||++|+.||..............
T Consensus 164 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 164 RELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp EECCTTC-CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred eecCCCC-ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 8875443 234467899999999886 56789999999999999999999999863322111000000
Q ss_pred ---cc---------cccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 005864 622 ---LS---------LNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671 (673)
Q Consensus 622 ---~~---------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L 671 (673)
.. ..-.....++............+.+++.+||+.||++|||++|+++..
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 00 000011233333345567778899999999999999999999999865
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-43 Score=364.60 Aligned_cols=254 Identities=23% Similarity=0.338 Sum_probs=211.1
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
..++|++.+.||+|+||.||+|... +|+.||+|++...... ....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 3567999999999999999999765 6999999998764332 2346778999999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC---ceEEeccccee
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY---EARVSDFGIAK 555 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfg~~~ 555 (673)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||+|||++.
T Consensus 106 v~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp EECCCCSCBHHHHHTTC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 99999999999999765 3588999999999999999999999 999999999999998654 59999999998
Q ss_pred ecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC
Q 005864 556 FLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635 (673)
Q Consensus 556 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+
T Consensus 180 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--------~~~~~~i~~~~~~~~ 250 (362)
T 2bdw_A 180 EVNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--------HRLYAQIKAGAYDYP 250 (362)
T ss_dssp CCTTC-CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCCC
T ss_pred EecCC-cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--------HHHHHHHHhCCCCCC
Confidence 76533 233456799999999999998999999999999999999999999864321 111222222333333
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+...+.++.+++.+||+.||++|||+.|+++
T Consensus 251 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 251 SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 3334445667999999999999999999999875
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-43 Score=359.55 Aligned_cols=253 Identities=23% Similarity=0.318 Sum_probs=207.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 479 (673)
++|++.+.||+|+||.||+|+.. +|+.||+|++...........+.+.+|..++.++ +||||+++++++.+++..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 56889999999999999999875 6899999999876555555677889999999988 899999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 89 ~e~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR---KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 99999999999998653 488999999999999999999999 999999999999999999999999999986544
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-ccccccccccCCCCCCCCcc
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-NMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 638 (673)
.........||+.|+|||++.+..++.++||||+||++|||++|+.||........... ........+.......+..
T Consensus 163 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~- 241 (345)
T 3a8x_A 163 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS- 241 (345)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTT-
T ss_pred CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCC-
Confidence 44445567899999999999999999999999999999999999999974322111000 0111112222333333322
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTM 664 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~ 664 (673)
.+.++.+++.+||+.||++||++
T Consensus 242 ---~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 242 ---LSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp ---SCHHHHHHHHHHTCSSTTTSTTC
T ss_pred ---CCHHHHHHHHHHhcCCHhHCCCC
Confidence 23458899999999999999995
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-43 Score=355.32 Aligned_cols=255 Identities=26% Similarity=0.412 Sum_probs=198.6
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhc--cCCCcccceeeeeec----CC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTE--IRHRNIVKFYGFCSH----PR 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~----~~ 474 (673)
.++|++.+.||+|+||+||+|++ +|+.||||++... ....+..|.+++.. ++||||+++++++.. ..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR------DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 46799999999999999999988 7999999998643 13445556666666 799999999999754 34
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHh--------hcCCCCeEEecCCCCCeEeCCCCce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH--------HDCFPPIVHRDISSKNVLLSSEYEA 546 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivH~dlk~~Nill~~~~~~ 546 (673)
..++||||+++|+|.++++.. .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~ 152 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQLT----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQC 152 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTTC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCE
T ss_pred eeEEehhhccCCCHHHHHhhc----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCE
Confidence 578999999999999999653 4899999999999999999999 77 99999999999999999999
Q ss_pred EEecccceeecCCCCCC----ceecccccccccccccccC------CcCcchhHHHHHHHHHHHHhC----------CCC
Q 005864 547 RVSDFGIAKFLKPGSSN----WTEFAGTFGYVAPELAYTM------KVTEKCDVYSFGVLALEVIKG----------KHP 606 (673)
Q Consensus 547 kl~Dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~el~~g----------~~p 606 (673)
||+|||+++........ .....||+.|+|||.+.+. .++.++||||||+++|||++| +.|
T Consensus 153 kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~p 232 (301)
T 3q4u_A 153 CIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPP 232 (301)
T ss_dssp EECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccc
Confidence 99999999876543332 2234789999999998876 556799999999999999999 777
Q ss_pred Ccccccccccccccccccccc--cCC-CCCCCC-cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 607 RDFISLLSSSSSNMNLSLNEI--LDP-RLPLPS-RNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
|.......... ...... .+. ....+. ......+.++.+++.+||+.||++|||++|+++.|++
T Consensus 233 f~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 299 (301)
T 3q4u_A 233 FYDVVPNDPSF----EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299 (301)
T ss_dssp TTTTSCSSCCH----HHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred ccccCCCCcch----hhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence 65322111100 001110 111 111111 1223466789999999999999999999999999863
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=354.17 Aligned_cols=247 Identities=23% Similarity=0.353 Sum_probs=208.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|+.. +|+.||+|+++..........+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 57889999999999999999775 69999999997654444445677889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~ 159 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 159 (318)
T ss_dssp CCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCc
Confidence 9999999999998753 488899999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.....||+.|+|||.+.+..++.++||||+||++|||++|+.||...... .....+.......+..
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--------~~~~~i~~~~~~~p~~--- 225 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--------KTYEKILNAELRFPPF--- 225 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHCCCCCCTT---
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCCC---
Confidence 23467999999999999999999999999999999999999999743221 1222233333333322
Q ss_pred HHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.+.++.+++.+||+.||++|| +++|+++
T Consensus 226 -~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 226 -FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -CCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 234588999999999999999 8888874
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=347.88 Aligned_cols=252 Identities=25% Similarity=0.428 Sum_probs=188.0
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||.||+|.. .+|+.||+|.+...........+.+.+|+.++.+++||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35788999999999999999976 57999999998765444444467899999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++++|.+++.... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 90 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRV--KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp EECCTTEEHHHHHHTCS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EecCCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 99999999999998653 4589999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.........|++.|+|||.+.+..++.++||||+|+++|||++|+.||...... .....+.......+.
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~--- 233 (278)
T 3cok_A 165 PHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVK--------NTLNKVVLADYEMPS--- 233 (278)
T ss_dssp ---------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-------------CCSSCCCCCT---
T ss_pred CCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHH--------HHHHHHhhcccCCcc---
Confidence 444444567899999999999888999999999999999999999998743221 111122222222222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.++.+++.+||+.||++|||++|+++
T Consensus 234 -~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 234 -FLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp -TSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -ccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 22345889999999999999999999975
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-43 Score=355.72 Aligned_cols=262 Identities=20% Similarity=0.278 Sum_probs=203.5
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.++|++.+.||+|+||+||+|+..+|+.||+|++..... .....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE-DEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccc-cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 367999999999999999999998899999999875432 2334577889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++ +|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 99 e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 99 EFMEK-DLKKVLDENK--TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp ECCSE-EHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred cCCCC-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 99986 8888887654 4588999999999999999999999 9999999999999999999999999999987655
Q ss_pred CCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------ccccccc------
Q 005864 561 SSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLSLNE------ 626 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~~~~------ 626 (673)
........+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+..... ....+..
T Consensus 173 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 252 (311)
T 3niz_A 173 VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPL 252 (311)
T ss_dssp CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHH
T ss_pred cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccch
Confidence 555556678999999999876 56899999999999999999999999743322110000 0000000
Q ss_pred ccCCCCCC-CCcc----hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 627 ILDPRLPL-PSRN----IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 627 ~~~~~~~~-~~~~----~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........ .... ....+.++.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 253 WKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000000 0000 0112346889999999999999999999986
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-43 Score=347.50 Aligned_cols=252 Identities=26% Similarity=0.422 Sum_probs=208.1
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.++|++.+.||+|+||+||+|+..++..||+|++...... .+++.+|++++.+++||||+++++++.+++..++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS----EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVT 82 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC----HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEE
Confidence 3578899999999999999999988889999998764322 456889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++...+ ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 83 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 83 EYISNGCLLNYLRSHG--KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp ECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred EccCCCcHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 9999999999997653 4589999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCC-CCCCCc
Q 005864 561 SSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPR-LPLPSR 637 (673)
Q Consensus 561 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 637 (673)
... .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||+.....+. ...+.... ...+..
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--------~~~~~~~~~~~~~~~ 229 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEV--------VLKVSQGHRLYRPHL 229 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--------HHHHHTTCCCCCCTT
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHH--------HHHHHcCCCCCCCCc
Confidence 221 123345678999999998899999999999999999999 9999874332111 11111111 111111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+..+.+++.+||+.||++|||++|+++.|++
T Consensus 230 ----~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 261 (268)
T 3sxs_A 230 ----ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEP 261 (268)
T ss_dssp ----SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGG
T ss_pred ----ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 23358899999999999999999999999863
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-43 Score=368.03 Aligned_cols=252 Identities=25% Similarity=0.458 Sum_probs=195.9
Q ss_pred cCCCccceeccCCcEEEEEEEeC----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
.+|++.+.||+|+||+||+|++. ++..||||+++... .....+.+.+|+.++.+++||||+++++++.+++..+
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 57899999999999999999764 57789999987542 2335678999999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++|+|.++++..+ ..+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 123 lv~e~~~~~sL~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKHD--AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp EEEECCTTCBHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 9999999999999998653 4589999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCCc---eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CC
Q 005864 558 KPGSSNW---TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RL 632 (673)
Q Consensus 558 ~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 632 (673)
....... ....+++.|+|||++.+..++.++||||||+++|||++ |+.||......+. ...+... +.
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~--------~~~i~~~~~~ 269 (373)
T 2qol_A 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV--------IKAVDEGYRL 269 (373)
T ss_dssp ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHH--------HHHHHTTEEC
T ss_pred ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH--------HHHHHcCCCC
Confidence 5432211 12335678999999999999999999999999999998 9999864322111 0111111 11
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+.+. ..+..+.+++.+||+.||++||++.|+++.|+
T Consensus 270 ~~~~----~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~ 305 (373)
T 2qol_A 270 PPPM----DCPAALYQLMLDCWQKDRNNRPKFEQIVSILD 305 (373)
T ss_dssp CCCT----TCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCc----cccHHHHHHHHHHhCcChhhCcCHHHHHHHHH
Confidence 1111 23345889999999999999999999999886
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-43 Score=357.95 Aligned_cols=253 Identities=21% Similarity=0.308 Sum_probs=208.0
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhh---HHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEI---SVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
+.|++.+.||+|+||.||+|... +|+.||+|.+........ ...+.+.+|+.++.+++||||+++++++.+++..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 56889999999999999999775 699999999876432211 13577899999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC----ceEEecccc
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY----EARVSDFGI 553 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg~ 553 (673)
+||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+
T Consensus 91 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEK---ESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEECCCSCBHHHHHTTS---SCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEcCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 999999999999999764 3589999999999999999999999 999999999999999887 799999999
Q ss_pred eeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
+....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+......
T Consensus 165 a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~~~~~~~~ 235 (326)
T 2y0a_A 165 AHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANVSAVNYE 235 (326)
T ss_dssp CEECCTTS-CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHHTCCC
T ss_pred CeECCCCC-ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH--------HHHHHHHhcCCC
Confidence 98875432 234567999999999999889999999999999999999999998643211 111111111222
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.......+..+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 222222233456889999999999999999999986
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=362.16 Aligned_cols=252 Identities=21% Similarity=0.288 Sum_probs=208.3
Q ss_pred HHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCee
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 476 (673)
...++|.+.+.||+|+||+||+|+.+ +|+.||+|+++..........+.+..|..++..+ +||||+++++++.+++..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34578999999999999999999875 6899999999765433334466788899999887 899999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~ 167 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKE 167 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhh
Confidence 99999999999999998653 488999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCC
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
............||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+.
T Consensus 168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~~~~~p~ 239 (345)
T 1xjd_A 168 NMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--------ELFHSIRMDNPFYPR 239 (345)
T ss_dssp CCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCT
T ss_pred cccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH--------HHHHHHHhCCCCCCc
Confidence 544444455678999999999999999999999999999999999999999743221 111122222222222
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQ-TVC 668 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~-~v~ 668 (673)
. .+.++.+++.+||+.||++||++. |++
T Consensus 240 ~----~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 240 W----LEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp T----SCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred c----cCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 1 234588999999999999999987 554
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=368.21 Aligned_cols=254 Identities=24% Similarity=0.418 Sum_probs=207.1
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|.+.+.||+|+||+||+|.+. +++.||||.++... .....+.+.+|++++++++||||+++++++..++..++|
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 190 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL--PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV 190 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS--CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence 357888999999999999999886 79999999987542 233456789999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.++++..+ ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 191 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 191 MELVQGGDFLTFLRTEG--ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp EECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred EEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 99999999999998643 4588999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCCc--eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCC
Q 005864 560 GSSNW--TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636 (673)
Q Consensus 560 ~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
..... ....+++.|+|||.+.+..++.++||||||+++|||++ |..||......+.. ..... ..+++.+.
T Consensus 266 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~-----~~~~~--~~~~~~~~ 338 (377)
T 3cbl_A 266 GVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTR-----EFVEK--GGRLPCPE 338 (377)
T ss_dssp SEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHH-----HHHHT--TCCCCCCT
T ss_pred CceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHH-----HHHHc--CCCCCCCC
Confidence 21111 12235678999999998899999999999999999998 99998743321110 00000 11222222
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
. .+.++.+++.+||+.||++|||++++++.|+
T Consensus 339 ~----~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 370 (377)
T 3cbl_A 339 L----CPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370 (377)
T ss_dssp T----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred C----CCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 2 2345889999999999999999999999986
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=358.25 Aligned_cols=252 Identities=19% Similarity=0.344 Sum_probs=205.7
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC----
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR---- 474 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 474 (673)
..++|++.+.||+|+||.||+|++. +|+.||||++.... .....+.+.+|+.++++++||||+++++++.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 81 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKW 81 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchh
Confidence 3467899999999999999999876 79999999987543 2334678999999999999999999999986543
Q ss_pred -----------------------------------------------------eeeEEEecccCCChHHHHhcCCCCccc
Q 005864 475 -----------------------------------------------------HSFLVYECLERGSLAEILSNDGSIKEF 501 (673)
Q Consensus 475 -----------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~l 501 (673)
..++||||+++|+|.+++.........
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~ 161 (332)
T 3qd2_B 82 QEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDR 161 (332)
T ss_dssp HHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGS
T ss_pred hhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccch
Confidence 278999999999999999987766677
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC------------Cceeccc
Q 005864 502 SWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS------------NWTEFAG 569 (673)
Q Consensus 502 ~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~ 569 (673)
++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....... ......|
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 8888999999999999999999 999999999999999999999999999998765421 2233568
Q ss_pred ccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHH
Q 005864 570 TFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEV 649 (673)
Q Consensus 570 ~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 649 (673)
|+.|+|||.+.+..++.++||||+|+++|||++|..|+..... ..........+ ........++.++
T Consensus 239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~----------~~~~~~~~~~~---~~~~~~~~~~~~l 305 (332)
T 3qd2_B 239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR----------IITDVRNLKFP---LLFTQKYPQEHMM 305 (332)
T ss_dssp CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH----------HHHHHHTTCCC---HHHHHHCHHHHHH
T ss_pred CcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH----------HHHHhhccCCC---cccccCChhHHHH
Confidence 9999999999999999999999999999999999888542111 11111111111 2334455678999
Q ss_pred HHHcccCCCCCCCCHHHHHH
Q 005864 650 ALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 650 i~~cl~~dp~~Rps~~~v~~ 669 (673)
+.+||+.||++|||++|+++
T Consensus 306 i~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 306 VQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHccCCCCcCCCHHHHhh
Confidence 99999999999999999986
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-43 Score=357.96 Aligned_cols=263 Identities=24% Similarity=0.324 Sum_probs=203.6
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC----ee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR----HS 476 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~ 476 (673)
.++|++.+.||+|+||+||+|++. ++.||||++.... .....+.+|+.++.+++||||+++++++..+. ..
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 97 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD----KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDL 97 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc----hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceE
Confidence 367899999999999999999875 8999999986532 22445567999999999999999999998754 36
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcC-------CCCeEEecCCCCCeEeCCCCceEEe
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDC-------FPPIVHRDISSKNVLLSSEYEARVS 549 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-------~~~ivH~dlk~~Nill~~~~~~kl~ 549 (673)
++||||+++|+|.++++.. .+++..+..++.|+++||+|||+.. .++|+||||||+||+++.++.+||+
T Consensus 98 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 98 WLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence 9999999999999999764 3899999999999999999999861 2389999999999999999999999
Q ss_pred cccceeecCCCCCC--ceeccccccccccccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc----
Q 005864 550 DFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS---- 618 (673)
Q Consensus 550 Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~---- 618 (673)
|||+++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...........
T Consensus 174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 253 (322)
T 3soc_A 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI 253 (322)
T ss_dssp CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH
T ss_pred cCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh
Confidence 99999877544332 233578999999999876 3567789999999999999999999874322110000
Q ss_pred ----ccccccccccCCCCCC-CCc--chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 619 ----NMNLSLNEILDPRLPL-PSR--NIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 619 ----~~~~~~~~~~~~~~~~-~~~--~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
................ ... .....+.++.+++.+||+.||++|||++|+++.|+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~ 314 (322)
T 3soc_A 254 GQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERIT 314 (322)
T ss_dssp CSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 0000001111111111 111 11234567999999999999999999999999986
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=358.97 Aligned_cols=251 Identities=20% Similarity=0.260 Sum_probs=210.1
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 478 (673)
.++|++.+.||+|+||+||+|+.. +|+.||+|+++..........+.+..|..++..+ +||||+++++++.+.+..++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 467999999999999999999876 4889999999875444444567788999999988 89999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
||||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 99 v~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 999999999999998653 488999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
..........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.......+..
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~--------~~~~~~i~~~~~~~p~~- 243 (353)
T 2i0e_A 173 WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--------DELFQSIMEHNVAYPKS- 243 (353)
T ss_dssp CTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHCCCCCCTT-
T ss_pred cCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH--------HHHHHHHHhCCCCCCCC-
Confidence 444445567899999999999999999999999999999999999999974322 11222333333333322
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPT-----MQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps-----~~~v~~ 669 (673)
.+.++.+++.+||+.||++||+ ++|+++
T Consensus 244 ---~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 244 ---MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp ---SCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred ---CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 3345889999999999999995 566653
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-42 Score=357.46 Aligned_cols=247 Identities=21% Similarity=0.258 Sum_probs=209.2
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|+.. +|+.||+|++...........+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57889999999999999999775 69999999997654444445678899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp ECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC
Confidence 9999999999998753 488999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+..
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~~~~~p~~--- 260 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI--------QIYEKIVSGKVRFPSH--- 260 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCTT---
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH--------HHHHHHHcCCCCCCCC---
Confidence 23467899999999999999999999999999999999999999743221 1222233333333322
Q ss_pred HHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPT-----MQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps-----~~~v~~ 669 (673)
.+.++.+++.+||+.||++||+ ++|+++
T Consensus 261 -~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 261 -FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp -CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred -CCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 2345889999999999999998 888764
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-43 Score=349.13 Aligned_cols=250 Identities=26% Similarity=0.430 Sum_probs=207.0
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
++|++.+.||+|+||+||+|.+.+++.||+|++...... .+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE 85 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccC----HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEE
Confidence 578889999999999999999988999999998754322 3568899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++.... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 86 ~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 160 (269)
T 4hcu_A 86 FMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 160 (269)
T ss_dssp CCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred eCCCCcHHHHHHhcC--cccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccc
Confidence 999999999997654 4588999999999999999999999 99999999999999999999999999998654321
Q ss_pred C-CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCCCCCcc
Q 005864 562 S-NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPSRN 638 (673)
Q Consensus 562 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 638 (673)
. ......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||......+ ....+... ....+.
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~-- 230 (269)
T 4hcu_A 161 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--------VVEDISTGFRLYKPR-- 230 (269)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------HHHHHHTTCCCCCCT--
T ss_pred cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH--------HHHHHhcCccCCCCC--
Confidence 1 1233456778999999998999999999999999999999 999987432211 11111111 111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+..+.+++.+||+.||++|||++|+++.|+
T Consensus 231 --~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~ 262 (269)
T 4hcu_A 231 --LASTHVYQIMNHCWRERPEDRPAFSRLLRQLA 262 (269)
T ss_dssp --TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --cCCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 12345889999999999999999999999986
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-42 Score=358.58 Aligned_cols=252 Identities=24% Similarity=0.339 Sum_probs=207.2
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|+.. +|+.||+|++...........+.+.+|+.++..++|||||++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 57889999999999999999765 58899999997655444555678999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..+...
T Consensus 95 e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQN---VHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp CCCTTEEHHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 999999999999875 3488999999999999999999999 9999999999999999999999999999877543
Q ss_pred CCCceeccccccccccccccc---CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 561 SSNWTEFAGTFGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .......+.......+.
T Consensus 169 -~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~-----~~~~~~~~~~~~~~~p~- 241 (384)
T 4fr4_A 169 -TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS-----SKEIVHTFETTVVTYPS- 241 (384)
T ss_dssp -CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC-----HHHHHHHHHHCCCCCCT-
T ss_pred -CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc-----HHHHHHHHhhcccCCCC-
Confidence 33455789999999999864 458999999999999999999999996322110 01111111122222222
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCC-HHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPT-MQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps-~~~v~~ 669 (673)
..+..+.+++.+||+.||++||+ ++++.+
T Consensus 242 ---~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 242 ---AWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp ---TSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ---cCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 22345889999999999999998 676653
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=371.62 Aligned_cols=257 Identities=20% Similarity=0.286 Sum_probs=208.5
Q ss_pred HHHHHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 396 EIIRATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 396 ~~~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
++....++|++.+.||+|+||+||+|+.. +|+.||+|++++.........+.+.+|+.++..++|||||++++++.+++
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 44445678999999999999999999775 58999999987643333333456889999999999999999999999999
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++||||+++|+|.++++.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a 215 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTC 215 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEecccee
Confidence 999999999999999999764 378899999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC-CceecccccccccccccccCC----cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC
Q 005864 555 KFLKPGSS-NWTEFAGTFGYVAPELAYTMK----VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD 629 (673)
Q Consensus 555 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~----~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 629 (673)
+....... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...... .....++.
T Consensus 216 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--------~~~~~i~~ 287 (410)
T 3v8s_A 216 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV--------GTYSKIMN 287 (410)
T ss_dssp EECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHT
T ss_pred EeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh--------hHHHHHHh
Confidence 87654332 223567999999999997665 789999999999999999999999743221 11122221
Q ss_pred CC--CCCCCcchHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 005864 630 PR--LPLPSRNIQDKLISILEVALLCLEESPES--RPTMQTVCQ 669 (673)
Q Consensus 630 ~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~~v~~ 669 (673)
.. +..+. ....+.++.+++.+||..+|.+ ||+++|+++
T Consensus 288 ~~~~~~~p~--~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 288 HKNSLTFPD--DNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp HHHHCCCCT--TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred ccccccCCC--cccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 11 11111 1122345889999999999988 999999975
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=360.33 Aligned_cols=251 Identities=20% Similarity=0.274 Sum_probs=207.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+.|++.+.||+|+||+||+|... +|+.||+|.+..... .....+.+|++++..++||||+++++++.+++..++||
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~---~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 127 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP---LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 127 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch---hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEE
Confidence 57899999999999999999775 689999999875432 23567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC--CCceEEecccceeecC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS--EYEARVSDFGIAKFLK 558 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~~~ 558 (673)
||+++|+|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||++....
T Consensus 128 E~~~gg~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 128 EFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp ECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred EcCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecC
Confidence 9999999999997653 4589999999999999999999999 9999999999999974 4679999999998875
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
... ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+. ...+.......+...
T Consensus 203 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~--------~~~i~~~~~~~~~~~ 273 (387)
T 1kob_A 203 PDE-IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET--------LQNVKRCDWEFDEDA 273 (387)
T ss_dssp TTS-CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH--------HHHHHHCCCCCCSST
T ss_pred CCc-ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHH--------HHHHHhCCCCCCccc
Confidence 432 33456799999999999999999999999999999999999999974332111 111111111122222
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.++.+++.+||+.||++|||+.|+++
T Consensus 274 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 274 FSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 2234456899999999999999999999986
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=356.34 Aligned_cols=250 Identities=25% Similarity=0.351 Sum_probs=187.6
Q ss_pred cceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeeeEEEeccc
Q 005864 407 EQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSFLVYECLE 484 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 484 (673)
.+.||+|+||+||+|... +|+.||||++... ....+.+|+.++..++ ||||+++++++.+++..++||||++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~ 89 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLN 89 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccC
Confidence 478999999999999775 6899999998643 2456778999999997 9999999999999999999999999
Q ss_pred CCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC---ceEEecccceeecCCCC
Q 005864 485 RGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY---EARVSDFGIAKFLKPGS 561 (673)
Q Consensus 485 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfg~~~~~~~~~ 561 (673)
+|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++......
T Consensus 90 ~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 163 (325)
T 3kn6_A 90 GGELFERIKKK---KHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN 163 (325)
T ss_dssp SCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--
T ss_pred CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC
Confidence 99999999875 3589999999999999999999999 999999999999998765 89999999998776655
Q ss_pred CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHH
Q 005864 562 SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (673)
.......||+.|+|||.+.+..++.++||||+|+++|||++|+.||........ ..........+.......+...+..
T Consensus 164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (325)
T 3kn6_A 164 QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-CTSAVEIMKKIKKGDFSFEGEAWKN 242 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHHHTTTCCCCCSHHHHT
T ss_pred CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc-cccHHHHHHHHHcCCCCCCcccccC
Confidence 555667789999999999999999999999999999999999999975332111 0111222334444455544444455
Q ss_pred HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 642 KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 642 ~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.++.+++.+||+.||++|||++|+++
T Consensus 243 ~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 243 VSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp SCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 6678999999999999999999998864
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-42 Score=366.81 Aligned_cols=249 Identities=24% Similarity=0.402 Sum_probs=209.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||+|+||.||+|++. +|+.||||++.............+.+|+.+++.++||||+++++++..++..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56889999999999999999875 79999999997654444445678999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 96 E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 96 EYVSGGELFDYICKN---GRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp ECCSSEEHHHHTTSS---SSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 999999999999765 3589999999999999999999999 9999999999999999999999999999877543
Q ss_pred CCCceecccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.......||+.|+|||.+.+..+ +.++||||+||++|||++|+.||+.... ......+.+.....+..
T Consensus 170 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--------~~~~~~i~~~~~~~p~~-- 238 (476)
T 2y94_A 170 -EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV--------PTLFKKICDGIFYTPQY-- 238 (476)
T ss_dssp -CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS--------HHHHHHHHTTCCCCCTT--
T ss_pred -ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH--------HHHHHHHhcCCcCCCcc--
Confidence 23345679999999999988765 6899999999999999999999974321 11222233333333322
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.++.+++.+||+.||++|||++|+++
T Consensus 239 --~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 239 --LNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp --CCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --CCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 2345889999999999999999999985
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=361.88 Aligned_cols=249 Identities=22% Similarity=0.249 Sum_probs=197.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHH-HhccCCCcccceeeeeecCCeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKA-LTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
++|++.+.||+|+||+||+|+.+ +++.||+|++++.........+.+.+|..+ ++.++||||+++++++.+.+..++|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 56889999999999999999775 588999999977654444445667777777 5678999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 118 ~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 118 LDYINGGELFYHLQRER---CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EeCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 99999999999998653 478889999999999999999999 999999999999999999999999999986544
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....++......+..
T Consensus 192 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--------~~~~~i~~~~~~~~~~-- 261 (373)
T 2r5t_A 192 HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--------EMYDNILNKPLQLKPN-- 261 (373)
T ss_dssp CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH--------HHHHHHHHSCCCCCSS--
T ss_pred CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH--------HHHHHHHhcccCCCCC--
Confidence 444455678999999999999999999999999999999999999999743221 1222233333333322
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVC 668 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~ 668 (673)
.+.++.+++.+||+.||++||++.+.+
T Consensus 262 --~~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 262 --ITNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp --SCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred --CCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 234588999999999999999985433
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=348.80 Aligned_cols=261 Identities=23% Similarity=0.335 Sum_probs=200.7
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
++|++.+.||+|+||+||+|+..+|+.||+|++...... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED-EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG-GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc-cccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence 468899999999999999998888999999998654322 2234678899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++ +|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 81 HLDQ-DLKKLLDVCE--GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CCSE-EHHHHHHTST--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred ecCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 9986 9999987653 4588899999999999999999999 99999999999999999999999999998765444
Q ss_pred CCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccccc-----ccc
Q 005864 562 SNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLSLN-----EIL 628 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~~~-----~~~ 628 (673)
.......+|+.|+|||.+.+. .++.++||||+||++|||++|+.||......+..... ....+. ...
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccc
Confidence 444556789999999998764 5899999999999999999999999753321110000 000000 001
Q ss_pred CCCCCCC-----CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 629 DPRLPLP-----SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 629 ~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
++.+... .......+.++.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1111100 0011123456889999999999999999999985
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=355.00 Aligned_cols=251 Identities=25% Similarity=0.340 Sum_probs=202.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|... +++.||||++...... ...+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc--chHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 57899999999999999999775 7999999998654222 23467889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..+...
T Consensus 85 e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 85 EYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp ECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred EcCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 999999999999765 3588999999999999999999999 9999999999999999999999999999876432
Q ss_pred C--CCceecccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 561 S--SNWTEFAGTFGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 561 ~--~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
. .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||+....... ............ .
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-------~~~~~~~~~~~~--~ 229 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-------EYSDWKEKKTYL--N 229 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH-------HHHHHHTTCTTS--T
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH-------HHHHHhcccccC--C
Confidence 2 22345679999999999987775 7799999999999999999999974322110 011111111111 1
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+...+..+.+++.+||+.||++|||++|+++
T Consensus 230 ~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 230 PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 12233456889999999999999999999975
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=354.00 Aligned_cols=251 Identities=22% Similarity=0.326 Sum_probs=196.5
Q ss_pred hcCCCccceeccCCcEEEEEEEe----CCCCEEEEEeeccchhh-hhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL----PSGEVVAVKKFHSLLLS-EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
.++|++.+.||+|+||.||+|+. .+|+.||+|+++..... .......+.+|+.+++.++||||+++++++..++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35789999999999999999976 47999999999764322 22345668899999999999999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccccee
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 555 (673)
.++||||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~ 169 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCK 169 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC-
T ss_pred EEEEEeCCCCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCccc
Confidence 999999999999999998653 478899999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC
Q 005864 556 FLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635 (673)
Q Consensus 556 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
.............||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .....+.......+
T Consensus 170 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~i~~~~~~~p 241 (327)
T 3a62_A 170 ESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK--------KTIDKILKCKLNLP 241 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHHTCCCCC
T ss_pred ccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhCCCCCC
Confidence 6544433344567999999999999989999999999999999999999999743221 11222222333333
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.. .+.++.+++.+||+.||++|| ++.|+++
T Consensus 242 ~~----~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 242 PY----LTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp TT----SCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CC----CCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 22 234588999999999999999 7788875
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=351.22 Aligned_cols=251 Identities=22% Similarity=0.325 Sum_probs=197.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhh-----------------------hHHHHHHHHHHHHHhc
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSE-----------------------ISVQREFLNEIKALTE 457 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~-----------------------~~~~~~~~~e~~~l~~ 457 (673)
++|++.+.||+|+||+||+|... +|+.||||++....... ....+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 57899999999999999999764 68999999986543211 1124568899999999
Q ss_pred cCCCcccceeeeeec--CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCC
Q 005864 458 IRHRNIVKFYGFCSH--PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISS 535 (673)
Q Consensus 458 l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~ 535 (673)
++||||+++++++.+ .+..++||||+++|+|.+++.. ..+++..+..++.|+++||+|||+. +|+||||||
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 165 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKP 165 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCG
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCH
Confidence 999999999999986 5678999999999999887543 3589999999999999999999999 999999999
Q ss_pred CCeEeCCCCceEEecccceeecCCCCCCceecccccccccccccccCC---cCcchhHHHHHHHHHHHHhCCCCCccccc
Q 005864 536 KNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFISL 612 (673)
Q Consensus 536 ~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~il~el~~g~~p~~~~~~ 612 (673)
+||+++.++.+||+|||++..............||+.|+|||.+.+.. ++.++||||||+++|||++|+.||.....
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 999999999999999999998765544445567999999999987655 47889999999999999999999974322
Q ss_pred ccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 613 LSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
... ...+.......+. ....+..+.+++.+||+.||++|||++|+++
T Consensus 246 ~~~--------~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 246 MCL--------HSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp HHH--------HHHHHHCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHH--------HHHHhcccCCCCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 111 0111111111111 0122345889999999999999999999875
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=345.83 Aligned_cols=253 Identities=28% Similarity=0.450 Sum_probs=194.5
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhh-hHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSE-ISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|.+ .|+.||||++....... ....+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 5788899999999999999987 48999999987543322 233577899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC--------CCceEEeccc
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS--------EYEARVSDFG 552 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--------~~~~kl~Dfg 552 (673)
||+++++|.+++... .+++..+..++.|+++||+|||+++..+++||||||+||+++. ++.+||+|||
T Consensus 86 e~~~~~~L~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp ECCTTEEHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EcCCCCCHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 999999999999643 4889999999999999999999992222999999999999986 6789999999
Q ss_pred ceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC-
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR- 631 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 631 (673)
++....... .....|++.|+|||.+.+..++.++||||+|+++|||++|+.||......... .......
T Consensus 162 ~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~--------~~~~~~~~ 231 (271)
T 3dtc_A 162 LAREWHRTT--KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA--------YGVAMNKL 231 (271)
T ss_dssp C---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHH--------HHHHTSCC
T ss_pred ccccccccc--ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH--------HhhhcCCC
Confidence 998664332 23457899999999999989999999999999999999999999743321110 1111111
Q ss_pred -CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 632 -LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 632 -~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+.+. ..+..+.+++.+||+.||++|||++|+++.|++
T Consensus 232 ~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 232 ALPIPS----TCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp CCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred CCCCCc----ccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 11111 223458899999999999999999999999974
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-42 Score=356.95 Aligned_cols=261 Identities=23% Similarity=0.278 Sum_probs=207.5
Q ss_pred HHHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhh--hhHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 398 IRATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLS--EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 398 ~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
....++|++.+.||+|+||+||+|.. .+++.||+|++...... .....+.+.+|+.++++++||||+++++++.+++
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 45567899999999999999999976 46889999998754322 2345678999999999999999999999999999
Q ss_pred eeeEEEecccCCChHHHHhcCC-------------------------------------CCccchHHHHHHHHHHHHHHH
Q 005864 475 HSFLVYECLERGSLAEILSNDG-------------------------------------SIKEFSWIVRTNVIKSVANAL 517 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~-------------------------------------~~~~l~~~~~~~i~~~i~~~l 517 (673)
..++||||+++|+|.+++.... ....+++..+..++.|++.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 9999999999999999985210 012357788899999999999
Q ss_pred HHHhhcCCCCeEEecCCCCCeEeCCCC--ceEEecccceeecCCCCC----Cceeccccccccccccccc--CCcCcchh
Q 005864 518 SYMHHDCFPPIVHRDISSKNVLLSSEY--EARVSDFGIAKFLKPGSS----NWTEFAGTFGYVAPELAYT--MKVTEKCD 589 (673)
Q Consensus 518 ~~LH~~~~~~ivH~dlk~~Nill~~~~--~~kl~Dfg~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~--~~~~~~~D 589 (673)
+|||+. +|+||||||+||+++.++ .+||+|||++..+..... ......||+.|+|||.+.+ ..++.++|
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 999999 999999999999998776 899999999987643221 2345678999999999865 67899999
Q ss_pred HHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 590 VYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 590 v~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
|||||+++|||++|+.||...... .....+.......+.......+..+.+++.+||+.||.+|||+.|+++
T Consensus 259 iwslG~il~el~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPGVNDA--------DTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCCCCCChH--------HHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 999999999999999999743322 122223333333333333344567899999999999999999999986
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-43 Score=353.05 Aligned_cols=259 Identities=26% Similarity=0.385 Sum_probs=202.2
Q ss_pred cCCCccceeccCCcEEEEEEEe-----CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--CC
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-----PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH--PR 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~ 474 (673)
++|++.+.||+|+||+||+|++ .+|+.||||++... .....+.+.+|++++.+++||||+++++++.. ..
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 5788999999999999999974 36889999998754 23346789999999999999999999999865 35
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~ 161 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLT 161 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred ceEEEEEeCCCCCHHHHHHhcc--cccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccc
Confidence 6899999999999999998753 4589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCC---ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccc--ccccc-----cccc
Q 005864 555 KFLKPGSSN---WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSS--SSSNM-----NLSL 624 (673)
Q Consensus 555 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~--~~~~~-----~~~~ 624 (673)
......... .....++..|+|||.+.+..++.++||||||+++|||++|..|+........ ..... ....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (295)
T 3ugc_A 162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 241 (295)
T ss_dssp C-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred ccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHH
Confidence 876543221 2234567789999999999999999999999999999999999864321100 00000 0000
Q ss_pred cccc--CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 625 NEIL--DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 625 ~~~~--~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+.+ ..+.+.+. ..+.++.+++.+||+.||++|||++|+++.|+
T Consensus 242 ~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~ 287 (295)
T 3ugc_A 242 IELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 287 (295)
T ss_dssp HHHHHTTCCCCCCT----TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhccCcCCCCc----CcCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 1111 11222222 23346899999999999999999999999986
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=368.03 Aligned_cols=262 Identities=20% Similarity=0.269 Sum_probs=210.7
Q ss_pred HHHHHHHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec
Q 005864 394 YEEIIRATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH 472 (673)
Q Consensus 394 ~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 472 (673)
+.++....++|++.+.||+|+||+||+|+.. +++.||+|++.+...........+.+|+.++..++||||++++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3444555689999999999999999999876 488999999976433333334458899999999999999999999999
Q ss_pred CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 473 PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
++..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~--~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEecCCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchh
Confidence 999999999999999999998743 4589999999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCCC-ceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccc
Q 005864 553 IAKFLKPGSSN-WTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNE 626 (673)
Q Consensus 553 ~~~~~~~~~~~-~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 626 (673)
+++........ .....||+.|+|||++. ...++.++|||||||++|||++|+.||......+. ...
T Consensus 221 la~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~--------~~~ 292 (437)
T 4aw2_A 221 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET--------YGK 292 (437)
T ss_dssp TCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--------HHH
T ss_pred hhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH--------HHh
Confidence 99876544332 23467999999999987 56789999999999999999999999974332211 111
Q ss_pred ccCC--CCCCCCcchHHHHHHHHHHHHHcccCCCCC--CCCHHHHHH
Q 005864 627 ILDP--RLPLPSRNIQDKLISILEVALLCLEESPES--RPTMQTVCQ 669 (673)
Q Consensus 627 ~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~--Rps~~~v~~ 669 (673)
++.. ++..+. .....+.++.+++.+||..+|++ ||+++|+++
T Consensus 293 i~~~~~~~~~p~-~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 293 IMNHKERFQFPT-QVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp HHTHHHHCCCCS-SCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred hhhccccccCCc-ccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 1111 111111 11123345889999999988888 999999875
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-42 Score=359.41 Aligned_cols=246 Identities=23% Similarity=0.295 Sum_probs=199.5
Q ss_pred cceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 407 EQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
.+.||+|+||.||+|.. .+|+.||+|+++.... ...+.+.+|++++.+++||||+++++++.+.+..++||||+++
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM---KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSH---HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc---ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 56899999999999976 4699999999876432 2457889999999999999999999999999999999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe--CCCCceEEecccceeecCCCCCC
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL--SSEYEARVSDFGIAKFLKPGSSN 563 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill--~~~~~~kl~Dfg~~~~~~~~~~~ 563 (673)
|+|.+++.... ..+++..+..++.||++||+|||+. +|+||||||+||++ +.++.+||+|||+++...... .
T Consensus 171 ~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~-~ 244 (373)
T 2x4f_A 171 GELFDRIIDES--YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-K 244 (373)
T ss_dssp CEEHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-B
T ss_pred CcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-c
Confidence 99999987643 4588999999999999999999999 99999999999999 567899999999999875432 2
Q ss_pred ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHH
Q 005864 564 WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKL 643 (673)
Q Consensus 564 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (673)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+...+...+
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--------~~~~~i~~~~~~~~~~~~~~~~ 316 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA--------ETLNNILACRWDLEDEEFQDIS 316 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHTCCCSCSGGGTTSC
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhccCCCChhhhccCC
Confidence 34457999999999999889999999999999999999999999743221 1122222223222223333445
Q ss_pred HHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 644 ISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 644 ~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.++.+++.+||+.||.+|||++|+++
T Consensus 317 ~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 317 EEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 67899999999999999999999986
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=358.27 Aligned_cols=257 Identities=22% Similarity=0.400 Sum_probs=209.1
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP 473 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 473 (673)
..++|++.+.||+|+||.||+|+.. +++.||||.++... .....+.+.+|+.++++++||||+++++++.++
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence 4578999999999999999999774 35889999987542 233567899999999999999999999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCC---------------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEec
Q 005864 474 RHSFLVYECLERGSLAEILSNDGS---------------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRD 532 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~d 532 (673)
+..++||||+++|+|.+++..... ...+++.+++.++.||++||+|||++ +|+|||
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~D 199 (343)
T 1luf_A 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRD 199 (343)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 999999999999999999986431 14689999999999999999999999 999999
Q ss_pred CCCCCeEeCCCCceEEecccceeecCCCC--CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcc
Q 005864 533 ISSKNVLLSSEYEARVSDFGIAKFLKPGS--SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDF 609 (673)
Q Consensus 533 lk~~Nill~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~ 609 (673)
|||+||+++.++.+||+|||++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |..||..
T Consensus 200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 279 (343)
T 1luf_A 200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279 (343)
T ss_dssp CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence 99999999999999999999998654322 12234567889999999998899999999999999999999 9999874
Q ss_pred cccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 610 ISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
....+ ....+.+....... ...+..+.+++.+||+.||++|||+.++++.|+
T Consensus 280 ~~~~~--------~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~ 331 (343)
T 1luf_A 280 MAHEE--------VIYYVRDGNILACP---ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 331 (343)
T ss_dssp SCHHH--------HHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CChHH--------HHHHHhCCCcCCCC---CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHH
Confidence 32211 11112222221111 122345889999999999999999999999986
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-42 Score=360.06 Aligned_cols=255 Identities=23% Similarity=0.357 Sum_probs=208.4
Q ss_pred hcCCCccceeccCCcEEEEEEEeC--------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP--------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCS 471 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 471 (673)
.++|.+.+.||+|+||+||+|+.. .++.||||+++... .....+.+.+|+++++++ +||||+++++++.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc--CHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 357888999999999999999752 34679999987642 334567899999999999 8999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCC-------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCe
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGS-------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNV 538 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 538 (673)
.++..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 222 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNV 222 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGE
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceE
Confidence 99999999999999999999987542 23589999999999999999999999 999999999999
Q ss_pred EeCCCCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccc
Q 005864 539 LLSSEYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSS 615 (673)
Q Consensus 539 ll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~ 615 (673)
++++++.+||+|||+++....... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||......+
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~- 301 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE- 301 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-
T ss_pred EEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH-
Confidence 999999999999999987654322 2233457889999999999999999999999999999999 999987432211
Q ss_pred cccccccccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 616 SSSNMNLSLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 616 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
....+... ....+. ..+.++.+++.+||+.||++|||++|+++.|+
T Consensus 302 -------~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 348 (382)
T 3tt0_A 302 -------LFKLLKEGHRMDKPS----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 348 (382)
T ss_dssp -------HHHHHHTTCCCCCCS----SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -------HHHHHHcCCCCCCCc----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111111 111111 22345889999999999999999999999986
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=371.50 Aligned_cols=251 Identities=21% Similarity=0.240 Sum_probs=199.0
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||.||+|... +|+.||||++.............+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 367999999999999999999764 6999999999765444444567788999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH-DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||+++...
T Consensus 227 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER---VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp ECCCSSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EeeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 99999999999997653 58899999999999999999998 7 99999999999999999999999999998654
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
..........||+.|+|||++.+..++.++|||||||++|||++|+.||...... .....+.......+..
T Consensus 301 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--------~~~~~i~~~~~~~p~~- 371 (446)
T 4ejn_A 301 KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------KLFELILMEEIRFPRT- 371 (446)
T ss_dssp C-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCTT-
T ss_pred CCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--------HHHHHHHhCCCCCCcc-
Confidence 4444455678999999999999999999999999999999999999999743221 1112222223333322
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.+.++.+++.+||+.||.+|| +++|+++
T Consensus 372 ---~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 372 ---LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ---SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ---CCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 234588999999999999999 9999975
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-43 Score=358.01 Aligned_cols=254 Identities=25% Similarity=0.365 Sum_probs=198.8
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe----e
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH----S 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----~ 476 (673)
++|++.+.||+|+||+||+|++ .+|+.||||++......+......+.+|+.++.+++||||+++++++..... .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 5789999999999999999976 5789999999987655555667789999999999999999999999876543 4
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||+++|+|.++++..+ .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred EEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 99999999999999998653 488999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC---CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 557 LKPGSS---NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 557 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
...... ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+. ..........
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~--------~~~~~~~~~~ 237 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV--------AYQHVREDPI 237 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--------HHHHHHCCCC
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH--------HHHHhcCCCC
Confidence 644322 22345689999999999999999999999999999999999999974332111 1111111111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.......+.++.+++.+||+.||++||++.++++
T Consensus 238 ~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 238 PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp CHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred CcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 111111123456889999999999999998777664
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-42 Score=349.70 Aligned_cols=255 Identities=24% Similarity=0.386 Sum_probs=208.9
Q ss_pred hcCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
.++|.+.+.||+|+||.||+|.. .+++.||||+++... .....+.+.+|++++++++||||+++++++.+++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 99 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG 99 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence 46788999999999999999975 346889999987542 3345678999999999999999999999999999
Q ss_pred eeeEEEecccCCChHHHHhcCCC---------------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecC
Q 005864 475 HSFLVYECLERGSLAEILSNDGS---------------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDI 533 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dl 533 (673)
..++||||+++|+|.+++..... ...+++..++.++.|+++||+|||++ +|+||||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~di 176 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDL 176 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCccccc
Confidence 99999999999999999987542 23489999999999999999999999 9999999
Q ss_pred CCCCeEeCCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccc
Q 005864 534 SSKNVLLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFI 610 (673)
Q Consensus 534 k~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~ 610 (673)
||+||+++.++.+||+|||++......... .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||...
T Consensus 177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 256 (314)
T 2ivs_A 177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 256 (314)
T ss_dssp SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999999877543322 233456788999999999899999999999999999999 99998743
Q ss_pred ccccccccccccccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 611 SLLSSSSSNMNLSLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..... ...+... ....+ ...+..+.+++.+||+.||++|||+.|+++.|+
T Consensus 257 ~~~~~--------~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~ 307 (314)
T 2ivs_A 257 PPERL--------FNLLKTGHRMERP----DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307 (314)
T ss_dssp CGGGH--------HHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CHHHH--------HHHhhcCCcCCCC----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 22111 1111111 11111 123346889999999999999999999999886
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-43 Score=363.99 Aligned_cols=264 Identities=23% Similarity=0.361 Sum_probs=210.0
Q ss_pred HHHHHHHhcCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccce
Q 005864 394 YEEIIRATKNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKF 466 (673)
Q Consensus 394 ~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l 466 (673)
..++....++|++.+.||+|+||.||+|++ .+++.||||+++... .....+.+.+|++++.++ +||||+++
T Consensus 14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 345555678899999999999999999963 356899999997542 233467899999999999 79999999
Q ss_pred eeeeecCC-eeeEEEecccCCChHHHHhcCCC------------------------------------------------
Q 005864 467 YGFCSHPR-HSFLVYECLERGSLAEILSNDGS------------------------------------------------ 497 (673)
Q Consensus 467 ~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------ 497 (673)
++++.+++ ..++||||+++|+|.++++....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 99998755 48999999999999999986542
Q ss_pred ---------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 498 ---------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 498 ---------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 11288999999999999999999999 999999999999999999999999999987644332
Q ss_pred --CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 563 --NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 563 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
......+|+.|+|||++.+..++.++||||||+++|||++ |+.||.......... ..... ......+.
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~----~~~~~--~~~~~~~~--- 319 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC----RRLKE--GTRMRAPD--- 319 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHH----HHHHH--TCCCCCCT---
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHH----HHHHc--CCCCCCCC---
Confidence 2234567889999999999999999999999999999998 999987432211100 00000 01111111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+.++.+++.+||+.||++|||+.|+++.|+
T Consensus 320 -~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 351 (359)
T 3vhe_A 320 -YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 351 (359)
T ss_dssp -TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 12345889999999999999999999999986
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=358.01 Aligned_cols=252 Identities=23% Similarity=0.305 Sum_probs=205.5
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeee
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 477 (673)
..++|++.+.||+|+||+||+|..+ +|+.||||++..... ...+|++++.++ +||||+++++++.+++..+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~ 92 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVY 92 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEE
Confidence 3567999999999999999999775 689999999865422 234688888888 7999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC----CceEEecccc
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE----YEARVSDFGI 553 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~ 553 (673)
+||||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||++.++ +.+||+|||+
T Consensus 93 lv~E~~~gg~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~ 166 (342)
T 2qr7_A 93 VVTELMKGGELLDKILRQK---FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGF 166 (342)
T ss_dssp EEECCCCSCBHHHHHHTCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTT
T ss_pred EEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCC
Confidence 9999999999999998653 589999999999999999999999 99999999999998543 3599999999
Q ss_pred eeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
+..............||+.|+|||++.+..++.++||||+||++|||++|+.||..... .........+......
T Consensus 167 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~~~~i~~~~~~ 241 (342)
T 2qr7_A 167 AKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD-----DTPEEILARIGSGKFS 241 (342)
T ss_dssp CEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT-----SCHHHHHHHHHHCCCC
T ss_pred cccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc-----CCHHHHHHHHccCCcc
Confidence 99876555555567889999999999888899999999999999999999999974211 0111122222233333
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+...+...+.++.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 242 LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 333333344567899999999999999999999875
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-42 Score=356.00 Aligned_cols=250 Identities=23% Similarity=0.334 Sum_probs=191.3
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.+.|++.+.||+|+||+||+|+.. +++.||||+++... ..+.+.+|++++.+++||||+++++++.+++..++|
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 126 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV 126 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence 457889999999999999999876 58899999987542 245688999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC---CCceEEecccceee
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS---EYEARVSDFGIAKF 556 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~~~~ 556 (673)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.
T Consensus 127 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 127 LELVTGGELFDRIVEK---GYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp ECCCCSCBHHHHHTTC---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred EEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 9999999999999765 3488999999999999999999999 9999999999999975 78999999999986
Q ss_pred cCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCC
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....+.......+.
T Consensus 201 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-------~~~~~i~~~~~~~~~ 272 (349)
T 2w4o_A 201 VEHQ-VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ-------FMFRRILNCEYYFIS 272 (349)
T ss_dssp -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH-------HHHHHHHTTCCCCCT
T ss_pred cCcc-cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH-------HHHHHHHhCCCccCC
Confidence 6432 22345678999999999999899999999999999999999999986332111 111222222222222
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+...+.++.+++.+||+.||++|||+.|+++
T Consensus 273 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 273 PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 222334556899999999999999999999986
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-42 Score=346.36 Aligned_cols=251 Identities=24% Similarity=0.414 Sum_probs=204.0
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.++|++.+.||+|+||+||+|++.++..||+|++...... .+++.+|++++.+++||||+++++++.+++..++||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS----EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT 98 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC----HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEE
Confidence 4678889999999999999999988889999998754322 456889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 99 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 99 EYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp CCCTTCBHHHHHHCGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred eccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 9999999999998643 4589999999999999999999999 9999999999999999999999999999865432
Q ss_pred CC-CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCC-CCCCCc
Q 005864 561 SS-NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPR-LPLPSR 637 (673)
Q Consensus 561 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 637 (673)
.. ......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||......+. ...+.... ...+.
T Consensus 174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~--------~~~~~~~~~~~~~~- 244 (283)
T 3gen_A 174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET--------AEHIAQGLRLYRPH- 244 (283)
T ss_dssp HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--------HHHHHTTCCCCCCT-
T ss_pred ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHH--------HHHHhcccCCCCCC-
Confidence 11 1223446788999999998899999999999999999998 9999874332111 11111111 11111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+..+.+++.+||+.||++|||++|+++.|+
T Consensus 245 ---~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 276 (283)
T 3gen_A 245 ---LASEKVYTIMYSCWHEKADERPTFKILLSNIL 276 (283)
T ss_dssp ---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred ---cCCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 11245889999999999999999999999885
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-42 Score=359.28 Aligned_cols=264 Identities=19% Similarity=0.263 Sum_probs=205.1
Q ss_pred hcCCCccceeccC--CcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 401 TKNFDAEQCIGIG--GQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 401 ~~~~~~~~~ig~G--~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
.++|++.+.||+| +||+||+|+.. +|+.||||++...... ....+.+.+|+.+++.++|||||++++++.+++..+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACS-NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccC-hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 3679999999999 99999999875 6999999999765332 345678889999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++|+|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||.+...
T Consensus 103 lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFM-DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEccCCCCHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 99999999999999987532 3489999999999999999999999 9999999999999999999999999998754
Q ss_pred CCCC-------CCceeccccccccccccccc--CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccccc
Q 005864 558 KPGS-------SNWTEFAGTFGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEIL 628 (673)
Q Consensus 558 ~~~~-------~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 628 (673)
.... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.....................
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 258 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLL 258 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC---------
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccc
Confidence 3211 11223468899999999987 67999999999999999999999999753322111110000000000
Q ss_pred CCC---------------------------CC-------CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 629 DPR---------------------------LP-------LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 629 ~~~---------------------------~~-------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.. .+ .........+.++.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 259 DTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp -----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 000 00 000112233456899999999999999999999975
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=344.95 Aligned_cols=250 Identities=23% Similarity=0.366 Sum_probs=210.9
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||+|+||+||+|... +++.||+|.+...........+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 57889999999999999999775 58899999987654444556778999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 95 e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 95 ELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp ECCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred ecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 999999999998765 3588999999999999999999999 9999999999999999999999999999887654
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........|++.|+|||.+.+..++.++||||+|+++|||++|+.||+.....+ ....+.......+..
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~--- 237 (294)
T 2rku_A 169 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE--------TYLRIKKNEYSIPKH--- 237 (294)
T ss_dssp TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHTTCCCCCTT---
T ss_pred ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--------HHHHHhhccCCCccc---
Confidence 444555678999999999998889999999999999999999999987432211 111122222222222
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+..+.+++.+||+.||++|||++|+++
T Consensus 238 -~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 238 -INPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp -SCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -cCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 2345889999999999999999999875
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-42 Score=359.24 Aligned_cols=254 Identities=24% Similarity=0.364 Sum_probs=205.0
Q ss_pred cCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
++|++.+.||+|+||+||+|.+. +++.||||+++... .......+.+|+.++.+++||||+++++++.+++.
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc--ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 56888999999999999999742 46789999986542 23345678899999999999999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCC----CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC---ceEE
Q 005864 476 SFLVYECLERGSLAEILSNDGS----IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY---EARV 548 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl 548 (673)
.++||||+++|+|.+++...+. ...+++..++.++.||++||+|||++ +|+||||||+||+++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEE
Confidence 9999999999999999976431 23589999999999999999999999 999999999999999554 5999
Q ss_pred ecccceeecCCC--CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccc
Q 005864 549 SDFGIAKFLKPG--SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLN 625 (673)
Q Consensus 549 ~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~ 625 (673)
+|||+++..... ........+|+.|+|||.+.+..++.++|||||||++|||++ |..||......+ ...
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~--------~~~ 297 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--------VLE 297 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--------HHH
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--------HHH
Confidence 999999755221 122234567899999999999999999999999999999998 999987432211 111
Q ss_pred cccCCC-CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 626 EILDPR-LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 626 ~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+.... ...+. ..+..+.+++.+||+.||++|||+.|+++.|+
T Consensus 298 ~i~~~~~~~~~~----~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~ 341 (367)
T 3l9p_A 298 FVTSGGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341 (367)
T ss_dssp HHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHcCCCCCCCc----cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 111111 11111 22345889999999999999999999999885
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=342.95 Aligned_cols=261 Identities=18% Similarity=0.276 Sum_probs=202.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|... +|+.||||++..... .....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC-cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 47889999999999999999775 689999999875432 2334577889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++ ++.+.+.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~~-~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 81 EFCDQ-DLKKYFDSCN--GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp ECCSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred ecCCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 99987 6666665432 4589999999999999999999999 9999999999999999999999999999987655
Q ss_pred CCCceecccccccccccccccCC-cCcchhHHHHHHHHHHHHhCCCCCccccccccc--------cccccccc---cccc
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS--------SSNMNLSL---NEIL 628 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~--------~~~~~~~~---~~~~ 628 (673)
........||+.|+|||.+.+.. ++.++||||+||++|||++|..||......... .......+ ....
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 55556678899999999987766 799999999999999999998885321111000 00000000 0000
Q ss_pred C-------CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 629 D-------PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 629 ~-------~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+ +............+.++.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 0000000111223456889999999999999999999986
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=349.25 Aligned_cols=254 Identities=20% Similarity=0.288 Sum_probs=208.8
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhh---HHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEI---SVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
.+.|++.+.||+|+||.||+|... +|+.||+|.+........ ...+.+.+|+.++.+++||||+++++++.+++..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 356899999999999999999775 699999999876432221 1357789999999999999999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC----ceEEeccc
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY----EARVSDFG 552 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg 552 (673)
++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK---ESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC---SCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 9999999999999999864 3589999999999999999999999 999999999999999887 79999999
Q ss_pred ceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCC
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRL 632 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (673)
++....... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .....+.....
T Consensus 165 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~~~ 235 (321)
T 2a2a_A 165 LAHEIEDGV-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANITSVSY 235 (321)
T ss_dssp TCEECCTTC-CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHTTCC
T ss_pred cceecCccc-cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhccc
Confidence 998775432 234467899999999999999999999999999999999999998643211 11112222222
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.......+..+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred ccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 2221122233456899999999999999999999986
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=341.72 Aligned_cols=249 Identities=27% Similarity=0.450 Sum_probs=204.0
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||+||+|... +++.||+|++.............+.+|+.++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 357889999999999999999765 5789999998765444444567789999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++|+|||++.....
T Consensus 88 ~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~ 161 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 161 (279)
T ss_dssp ECCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC--
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCc
Confidence 99999999999997653 488899999999999999999999 999999999999999999999999999865432
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.......|++.|+|||.+.+..++.++||||+|+++|||++|+.||......+ ....+.......+..
T Consensus 162 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~-- 229 (279)
T 3fdn_A 162 --SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE--------TYKRISRVEFTFPDF-- 229 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHHTCCCCCTT--
T ss_pred --ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH--------HHHHHHhCCCCCCCc--
Confidence 22344678999999999999999999999999999999999999987432211 111111122222221
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+..+.+++.+||+.||++|||++|+++
T Consensus 230 --~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 230 --VTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp --SCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred --CCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 2345889999999999999999999986
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-42 Score=350.51 Aligned_cols=257 Identities=21% Similarity=0.307 Sum_probs=201.3
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||+||+|... +++.||+|++......+....+.+.+|+.++.+++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 478999999999999999999875 6889999999876555555678899999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
+||+++++|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 113 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 186 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG---PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTD 186 (309)
T ss_dssp EECCCCEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred EEecCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence 99999999999998653 488999999999999999999999 999999999999999999999999999986644
Q ss_pred CC-CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 560 GS-SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 560 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
.. .......+++.|+|||.+.+..++.++||||||+++|||++|+.||....... ....+....+.+...
T Consensus 187 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---------~~~~~~~~~~~~~~~ 257 (309)
T 2h34_A 187 EKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSV---------MGAHINQAIPRPSTV 257 (309)
T ss_dssp ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHH---------HHHHHHSCCCCGGGT
T ss_pred cccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHH---------HHHHhccCCCCcccc
Confidence 32 22334578999999999999899999999999999999999999997433210 011111111111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHhh
Q 005864 639 IQDKLISILEVALLCLEESPESRP-TMQTVCQLLC 672 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rp-s~~~v~~~L~ 672 (673)
....+.++.+++.+||+.||++|| +++++++.|+
T Consensus 258 ~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~ 292 (309)
T 2h34_A 258 RPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAH 292 (309)
T ss_dssp STTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHH
Confidence 122334588999999999999999 9999999885
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-42 Score=347.90 Aligned_cols=246 Identities=21% Similarity=0.235 Sum_probs=195.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 479 (673)
++|++.+.||+|+||+||+|+.. +|+.||||++......... ...+..|+..+.++ +||||++++++|.+++..++|
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKD-RARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHH-HHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHH-HHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 57999999999999999999876 7999999998654333333 34455566655555 899999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+ +++|.+++...+ ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 136 ~e~~-~~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWG--ASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp EECC-CCBHHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred Eecc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 9999 669999987654 4589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.. ......||++|+|||++.+ .++.++|||||||++|||++|..|+....... .+.....+ ....
T Consensus 210 ~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~-----------~~~~~~~~--~~~~ 274 (311)
T 3p1a_A 210 AG-AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQ-----------QLRQGYLP--PEFT 274 (311)
T ss_dssp ------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH-----------HHTTTCCC--HHHH
T ss_pred CC-CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHH-----------HHhccCCC--cccc
Confidence 32 2344568999999998875 78999999999999999999977654322211 11111111 1112
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+.++.+++.+||+.||++|||++|+++
T Consensus 275 ~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 275 AGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 223456899999999999999999999986
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=364.47 Aligned_cols=247 Identities=28% Similarity=0.421 Sum_probs=203.3
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC-eeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR-HSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv 479 (673)
.++|++.+.||+|+||+||+|.+. |+.||||+++... ..+.|.+|+.++++++||||+++++++.+.+ ..++|
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv 265 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence 467888999999999999999884 7899999987542 3567899999999999999999999987655 78999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.+++...+. ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 266 ~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341 (450)
T ss_dssp EECCTTCBHHHHHHHHCT-TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence 999999999999987542 3478899999999999999999999 999999999999999999999999999986532
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCCCCCc
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPSR 637 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 637 (673)
. .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+. ...+... +++.+.
T Consensus 342 ~---~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~--------~~~i~~~~~~~~p~- 409 (450)
T 1k9a_A 342 T---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--------VPRVEKGYKMDAPD- 409 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTH--------HHHHHTTCCCCCCT-
T ss_pred c---ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--------HHHHHcCCCCCCCC-
Confidence 2 122356889999999999999999999999999999998 9999874432111 1111111 222222
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+.++.+++.+||+.||++|||+.|+++.|+
T Consensus 410 ---~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~ 441 (450)
T 1k9a_A 410 ---GCPPAVYDVMKNCWHLDAATRPTFLQLREQLE 441 (450)
T ss_dssp ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 23456899999999999999999999999886
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=364.10 Aligned_cols=261 Identities=23% Similarity=0.265 Sum_probs=209.1
Q ss_pred HHHHHHHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec
Q 005864 394 YEEIIRATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH 472 (673)
Q Consensus 394 ~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 472 (673)
+++.....++|++.+.||+|+||+||+|+.+ +|+.||+|++.+.........+.+.+|..++..++||||+++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3444455688999999999999999999875 699999999976443333345568899999999999999999999999
Q ss_pred CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 473 PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
++..++||||+++|+|.+++...+ ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFG 207 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFG 207 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHS--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeech
Confidence 999999999999999999998643 3588999999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCCC-ceecccccccccccccc-------cCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccc
Q 005864 553 IAKFLKPGSSN-WTEFAGTFGYVAPELAY-------TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSL 624 (673)
Q Consensus 553 ~~~~~~~~~~~-~~~~~~~~~y~aPE~~~-------~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 624 (673)
+++........ .....||+.|+|||++. +..++.++|||||||++|||++|+.||......+. .
T Consensus 208 la~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~--------~ 279 (412)
T 2vd5_A 208 SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET--------Y 279 (412)
T ss_dssp TCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH--------H
T ss_pred hheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH--------H
Confidence 99887544332 23457999999999987 45789999999999999999999999974322111 1
Q ss_pred ccccCC--CCCCCCcchHHHHHHHHHHHHHcccCCCCCC---CCHHHHHH
Q 005864 625 NEILDP--RLPLPSRNIQDKLISILEVALLCLEESPESR---PTMQTVCQ 669 (673)
Q Consensus 625 ~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R---ps~~~v~~ 669 (673)
..++.. .+..+. .....+.++.+++.+||. +|++| |+++|+++
T Consensus 280 ~~i~~~~~~~~~p~-~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 280 GKIVHYKEHLSLPL-VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHHTHHHHCCCC-----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HHHHhcccCcCCCc-cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 111110 111110 111234568899999999 99998 68999864
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=342.29 Aligned_cols=253 Identities=23% Similarity=0.342 Sum_probs=207.8
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||.||+|... +|+.||+|++...... ....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS-ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC-HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 467999999999999999999765 6899999998765432 33467788999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc---eEEecccceee
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE---ARVSDFGIAKF 556 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~~~~ 556 (673)
|||+++|+|.+.+... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++. +||+|||++..
T Consensus 84 ~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp ECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 9999999999998765 3488999999999999999999999 9999999999999987655 99999999987
Q ss_pred cCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCC
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
.... .......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||......+ ....+.......+.
T Consensus 158 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--------~~~~~~~~~~~~~~ 228 (284)
T 3kk8_A 158 VNDS-EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--------LYAQIKAGAYDYPS 228 (284)
T ss_dssp CCSS-CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHTCCCCCT
T ss_pred cccC-ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH--------HHHHHHhccccCCc
Confidence 6543 23345678999999999999999999999999999999999999986432211 11111112222222
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+.++.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 229 PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 222233456889999999999999999999975
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-42 Score=369.42 Aligned_cols=253 Identities=22% Similarity=0.401 Sum_probs=206.8
Q ss_pred HhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
..++|++.+.||+|+||+||+|.+.+++.||||+++.... ..+.|.+|+.++++++||||+++++++. .+..++|
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB----CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc----cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 3467888999999999999999998899999999875422 3678999999999999999999999986 5678999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.++++... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 261 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~ 336 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIED 336 (454)
T ss_dssp ECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCC
T ss_pred EeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCC
Confidence 99999999999997542 13478889999999999999999999 999999999999999999999999999986643
Q ss_pred CCC-CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccC-CCCCCCC
Q 005864 560 GSS-NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILD-PRLPLPS 636 (673)
Q Consensus 560 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 636 (673)
... ......+++.|+|||.+....++.++||||||+++|||++ |+.||......+. ...+.. .+++.+.
T Consensus 337 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~--------~~~i~~~~~~~~~~ 408 (454)
T 1qcf_A 337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV--------IRALERGYRMPRPE 408 (454)
T ss_dssp HHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH--------HHHHHHTCCCCCCT
T ss_pred CceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHH--------HHHHHcCCCCCCCC
Confidence 211 1123346788999999998899999999999999999999 9999974332111 011111 1222222
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+.++.+++.+||+.||++|||++++++.|++
T Consensus 409 ----~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~ 441 (454)
T 1qcf_A 409 ----NCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 441 (454)
T ss_dssp ----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ----CCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence 233468999999999999999999999999864
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-42 Score=351.20 Aligned_cols=258 Identities=22% Similarity=0.366 Sum_probs=208.9
Q ss_pred hcCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHP 473 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 473 (673)
.++|++.+.||+|+||+||+|.+ .+++.||||+++... .....+.+.+|+.++.++ +||||+++++++..+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 36788999999999999999974 357889999987542 233467899999999999 999999999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCC---------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCe
Q 005864 474 RHSFLVYECLERGSLAEILSNDGS---------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNV 538 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 538 (673)
+..++||||+++|+|.+++..... ...+++..++.++.|+++||+|||+. +++||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceE
Confidence 999999999999999999986542 12489999999999999999999999 999999999999
Q ss_pred EeCCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccc
Q 005864 539 LLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSS 615 (673)
Q Consensus 539 ll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~ 615 (673)
+++.++.+||+|||++......... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||........
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 256 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK 256 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHH
T ss_pred EEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhH
Confidence 9999999999999999876544332 223456789999999999999999999999999999999 9999874322111
Q ss_pred cccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 616 SSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
. ......... ...+ ...+..+.+++.+||+.||.+|||+.|+++.|++
T Consensus 257 ~----~~~~~~~~~--~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 304 (313)
T 1t46_A 257 F----YKMIKEGFR--MLSP----EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304 (313)
T ss_dssp H----HHHHHHTCC--CCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred H----HHHhccCCC--CCCc----ccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence 0 000111111 1111 1223458899999999999999999999999863
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-42 Score=354.79 Aligned_cols=250 Identities=24% Similarity=0.423 Sum_probs=197.9
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCC----EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGE----VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
++|++.+.||+|+||+||+|++. +|+ +||+|.+.... .....+.+.+|+.++++++||||++++++|..+. .
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~ 91 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-E
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-e
Confidence 56889999999999999999764 444 35888775432 2234678999999999999999999999998765 7
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++|+||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 92 ~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEEECCTTCBHHHHHHHST--TSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 79999999999999998754 4588999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC--C
Q 005864 557 LKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP--R 631 (673)
Q Consensus 557 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~ 631 (673)
....... .....+|+.|+|||++.+..++.++||||||+++|||++ |+.||+.....+ ....+.. .
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---------~~~~~~~~~~ 237 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---------ISSILEKGER 237 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---------HHHHHHTTCC
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---------HHHHHHcCCC
Confidence 7544332 233456789999999999999999999999999999999 999997432211 1111111 1
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+.+.. .+..+.+++.+||+.||++|||+.|+++.|+
T Consensus 238 ~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~ell~~l~ 274 (327)
T 3poz_A 238 LPQPPI----CTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CCCCTT----BCHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred CCCCcc----CCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 222222 2345889999999999999999999999875
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-42 Score=343.30 Aligned_cols=252 Identities=25% Similarity=0.400 Sum_probs=194.5
Q ss_pred hcCCCccceeccCCcEEEEEEEeCC----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPS----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
.++|++.+.||+|+||+||+|.+.. +..||+|.+... ......+.+.+|+.++++++||||+++++++. ++..
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 4678899999999999999997642 457999998654 23345678999999999999999999999984 5678
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++.
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp EEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccc
Confidence 89999999999999998653 3588999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC-CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCC
Q 005864 557 LKPGSS-NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLP 633 (673)
Q Consensus 557 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 633 (673)
...... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||......+ ....+... ..+
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--------~~~~i~~~~~~~ 237 (281)
T 1mp8_A 166 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--------VIGRIENGERLP 237 (281)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--------HHHHHHTTCCCC
T ss_pred cCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--------HHHHHHcCCCCC
Confidence 654322 1233456789999999998899999999999999999997 999987432211 11111111 111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+. ..+..+.+++.+||+.||++|||+.|+++.|+
T Consensus 238 ~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 272 (281)
T 1mp8_A 238 MPP----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 272 (281)
T ss_dssp CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 221 23346889999999999999999999999886
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-42 Score=372.63 Aligned_cols=252 Identities=25% Similarity=0.436 Sum_probs=208.2
Q ss_pred hcCCCccceeccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
..+|++.+.||+|+||.||+|.+.. ++.||||.++.... ..++|.+|+.++++++||||++++++|..++..++|
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 294 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc----chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence 3568888999999999999998764 88999999875422 257799999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.++++.... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 295 ~E~~~~g~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 295 TEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp EECCTTCBHHHHHHHSCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred EEccCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 999999999999986542 4588999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC--CCCCC
Q 005864 560 GSSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP--RLPLP 635 (673)
Q Consensus 560 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 635 (673)
.... .....+++.|+|||.+.+..++.++|||||||++|||++ |..||......+. .+.+.. ++..+
T Consensus 371 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~---------~~~~~~~~~~~~~ 441 (495)
T 1opk_A 371 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---------YELLEKDYRMERP 441 (495)
T ss_dssp CCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH---------HHHHHTTCCCCCC
T ss_pred CceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHH---------HHHHHcCCCCCCC
Confidence 3211 122345678999999998899999999999999999999 9999875432111 111111 12222
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
. ..+..+.+++.+||+.||++|||+.++++.|++
T Consensus 442 ~----~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~ 475 (495)
T 1opk_A 442 E----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFET 475 (495)
T ss_dssp T----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred C----CCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 2 233458899999999999999999999999864
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=366.81 Aligned_cols=252 Identities=23% Similarity=0.294 Sum_probs=209.3
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|...+.||+|+||+||+|+.. +|+.||+|++...........+.+.+|+.++.+++||||+++++++.+.+..++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 57888899999999999999875 69999999997655444445678899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCC-CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 481 ECLERGSLAEILSNDGS-IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
||+++|+|.+++..... ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.+..
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 99999999999976532 34689999999999999999999999 999999999999999999999999999998765
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........+.......+.
T Consensus 342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~----~~~~~~~~i~~~~~~~p~--- 414 (543)
T 3c4z_A 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV----ENKELKQRVLEQAVTYPD--- 414 (543)
T ss_dssp TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC----CHHHHHHHHHHCCCCCCT---
T ss_pred CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch----hHHHHHHHHhhcccCCCc---
Confidence 5444455689999999999999999999999999999999999999997432110 011112222223333332
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCH
Q 005864 640 QDKLISILEVALLCLEESPESRPTM 664 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~ 664 (673)
..+..+.+++.+||+.||++||++
T Consensus 415 -~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 415 -KFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp -TSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred -ccCHHHHHHHHHhccCCHhHCCCC
Confidence 233458899999999999999975
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=343.56 Aligned_cols=254 Identities=30% Similarity=0.480 Sum_probs=201.9
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHH----HHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISV----QREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
++|++.+.||+|+||+||+|++ .+++.||+|++.......... .+.+.+|+.++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 5788999999999999999977 479999999986543332211 267899999999999999999999997655
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCC--eEEecCCCCCeEeCCCCc-----eEEe
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPP--IVHRDISSKNVLLSSEYE-----ARVS 549 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~-----~kl~ 549 (673)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. + |+||||||+||+++.++. +||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKA--HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred eEEEEecCCCCHHHHHhccc--CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 69999999999999987654 4689999999999999999999999 7 999999999999988776 9999
Q ss_pred cccceeecCCCCCCceeccccccccccccc--ccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccc
Q 005864 550 DFGIAKFLKPGSSNWTEFAGTFGYVAPELA--YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEI 627 (673)
Q Consensus 550 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~--~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 627 (673)
|||+++... .......|++.|+|||.+ ....++.++||||+|+++|||++|+.||.......... ........
T Consensus 172 Dfg~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~--~~~~~~~~ 246 (287)
T 4f0f_A 172 DFGLSQQSV---HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKF--INMIREEG 246 (287)
T ss_dssp CCTTCBCCS---SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHH--HHHHHHSC
T ss_pred CCCcccccc---ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHH--HHHHhccC
Confidence 999997443 233456789999999998 45567899999999999999999999997432211000 00000011
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+ ..+ ...+.++.+++.+||+.||++|||++|+++.|++
T Consensus 247 ~~~--~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 247 LRP--TIP----EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp CCC--CCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CCC--CCC----cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 111 111 1234468999999999999999999999999975
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=350.59 Aligned_cols=250 Identities=23% Similarity=0.366 Sum_probs=210.3
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||+|+||.||+|... +++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 57888999999999999999775 58899999987654444556778999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++... ..+++.++..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 121 e~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 121 ELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp CCCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred ecCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 999999999998764 3488999999999999999999999 9999999999999999999999999999987654
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........|++.|+|||.+.+..++.++||||||+++|||++|+.||......+ ....+.......+..
T Consensus 195 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--------~~~~~~~~~~~~~~~--- 263 (335)
T 2owb_A 195 GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE--------TYLRIKKNEYSIPKH--- 263 (335)
T ss_dssp TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHHTCCCCCTT---
T ss_pred cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH--------HHHHHhcCCCCCCcc---
Confidence 444556679999999999999899999999999999999999999997432211 111111122222222
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+..+.+++.+||+.||++|||++|+++
T Consensus 264 -~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 264 -INPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp -SCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 2235889999999999999999999875
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-42 Score=350.57 Aligned_cols=263 Identities=20% Similarity=0.317 Sum_probs=191.1
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||+||+|... +|+.||+|+++... .....+.+.+|++++++++||||+++++++..++..++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS--TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc--ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence 357899999999999999999775 68999999987543 222346788999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCC---CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 480 YECLERGSLAEILSNDG---SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
|||++ |+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 157 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARA 157 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEE
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCcccee
Confidence 99998 59999986532 123588999999999999999999999 999999999999999999999999999998
Q ss_pred cCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-------cccccccc--
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-------NMNLSLNE-- 626 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-------~~~~~~~~-- 626 (673)
............+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+.... .....+..
T Consensus 158 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 158 FGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp TTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGG
T ss_pred cCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhh
Confidence 7654444455678999999999876 4689999999999999999999999974332111000 00000000
Q ss_pred ---ccCCCCCC-CCcch---------HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 627 ---ILDPRLPL-PSRNI---------QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 627 ---~~~~~~~~-~~~~~---------~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+.... +.... ...+.++.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00000000 00000 012346899999999999999999999975
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-42 Score=371.40 Aligned_cols=256 Identities=21% Similarity=0.262 Sum_probs=210.0
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.............+.+|+.++..++|||||++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 356889999999999999999775 7999999999765444444567788999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.+++...+. ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~-~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQ-AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp ECCCCSCBHHHHHHSSSS-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEcCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 999999999999987542 4489999999999999999999999 999999999999999999999999999987754
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ .......+.......+
T Consensus 339 ~~-~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~----~~~i~~~i~~~~~~~p---- 409 (576)
T 2acx_A 339 GQ-TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK----REEVERLVKEVPEEYS---- 409 (576)
T ss_dssp TC-CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC----HHHHHHHHHHCCCCCC----
T ss_pred Cc-cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh----HHHHHHHhhcccccCC----
Confidence 32 33456899999999999998999999999999999999999999974321100 0001111111111222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
...+.++.+++.+||+.||++|| +++|+++
T Consensus 410 ~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 410 ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 12334688999999999999999 7888874
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-42 Score=342.13 Aligned_cols=250 Identities=20% Similarity=0.313 Sum_probs=203.0
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--CeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--RHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 479 (673)
++|++.+.||+|+||+||+|++. |+.||||+++.... .....+.+.+|+.++++++||||+++++++.++ +..++|
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDW-STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTC-CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 57889999999999999999984 89999999876432 233467799999999999999999999999876 778999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCC--eEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPP--IVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
|||+++|+|.+++..... ..+++..+..++.|++.||+|||+. + ++||||||+||+++.++.++++|||++...
T Consensus 88 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~ 163 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTN-FVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSF 163 (271)
T ss_dssp EECCTTCBHHHHHHSCSS-CCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred ecccCCCcHHHHHhhccc-CCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeee
Confidence 999999999999987542 3589999999999999999999998 7 999999999999999999999999987643
Q ss_pred CCCCCCceecccccccccccccccCCcCc---chhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCC
Q 005864 558 KPGSSNWTEFAGTFGYVAPELAYTMKVTE---KCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
.. ....+|+.|+|||.+.+..++. ++||||||+++|||++|+.||......+... ........+ ..
T Consensus 164 ~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~----~~~~~~~~~--~~ 232 (271)
T 3kmu_A 164 QS-----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGM----KVALEGLRP--TI 232 (271)
T ss_dssp SC-----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHH----HHHHSCCCC--CC
T ss_pred cc-----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHH----HHHhcCCCC--CC
Confidence 22 2346789999999998765554 7999999999999999999997433211100 000011111 11
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+. ..+.++.+++.+||+.||++|||++|+++.|+
T Consensus 233 ~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~ 266 (271)
T 3kmu_A 233 PP----GISPHVSKLMKICMNEDPAKRPKFDMIVPILE 266 (271)
T ss_dssp CT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11 22345889999999999999999999999986
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-42 Score=349.22 Aligned_cols=250 Identities=27% Similarity=0.457 Sum_probs=195.9
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
++|++.+.||+|+||+||+|++ .++.||||++... ...+.+.+|+.++++++||||+++++++.+ ..++|||
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e 79 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVME 79 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST-----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEE
T ss_pred hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh-----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEE
Confidence 5688899999999999999988 4789999998642 235788999999999999999999999874 4789999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc-eEEecccceeecCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE-ARVSDFGIAKFLKPG 560 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-~kl~Dfg~~~~~~~~ 560 (673)
|+++|+|.+++........+++..+..++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred cCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 9999999999987765456788999999999999999999932128999999999999998876 799999999765322
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC-CCCCCCcch
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPSRNI 639 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 639 (673)
.....||+.|+|||.+.+..++.++||||||+++|||++|+.||+....... ......... ..+.+
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~------~~~~~~~~~~~~~~~---- 226 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF------RIMWAVHNGTRPPLI---- 226 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH------HHHHHHHTTCCCCCB----
T ss_pred ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH------HHHHHHhcCCCCCcc----
Confidence 2335689999999999999999999999999999999999999874321100 000001111 11111
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+..+.+++.+||+.||++|||++|+++.|+
T Consensus 227 ~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 259 (307)
T 2eva_A 227 KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 259 (307)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 123345889999999999999999999999885
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=355.60 Aligned_cols=254 Identities=17% Similarity=0.216 Sum_probs=204.6
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 479 (673)
++|++.+.||+|+||+||+|.. .+|+.||||++..... .+.+.+|+.+++++ +||||+++++++..++..++|
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 83 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV 83 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence 5789999999999999999976 5799999999864321 24578899999999 999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc-----eEEecccce
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE-----ARVSDFGIA 554 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfg~~ 554 (673)
|||+ +++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 84 ~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a 157 (330)
T 2izr_A 84 LELL-GPSLEDLFDLCD--RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157 (330)
T ss_dssp EECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred EEeC-CCCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence 9999 899999998653 4689999999999999999999999 9999999999999998887 999999999
Q ss_pred eecCCCCCC-------ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccc
Q 005864 555 KFLKPGSSN-------WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEI 627 (673)
Q Consensus 555 ~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 627 (673)
+........ .....||+.|+|||++.+..++.++||||||+++|||++|+.||........ ......+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~-----~~~~~~i 232 (330)
T 2izr_A 158 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL-----KERYQKI 232 (330)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH-----HHHHHHH
T ss_pred eeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH-----HHHHHHH
Confidence 976543321 2456799999999999999999999999999999999999999974321110 0111111
Q ss_pred cCCCCCCCCcch-HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 628 LDPRLPLPSRNI-QDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 628 ~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.....+.+.... ...+ ++.+++..||+.||.+||+++++.+.|+
T Consensus 233 ~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~ 277 (330)
T 2izr_A 233 GDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFT 277 (330)
T ss_dssp HHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred HhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHH
Confidence 111111110000 0122 6999999999999999999999999885
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-42 Score=353.77 Aligned_cols=247 Identities=27% Similarity=0.414 Sum_probs=201.9
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+.|+..+.||+|+||+||+|+. .+|+.||||++...........+.+.+|++++++++||||+++++++..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588889999999999999976 579999999987654444455678999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||++ |+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 134 e~~~-g~l~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207 (348)
T ss_dssp ECCS-EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred ecCC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence 9998 58888886543 4589999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCCceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC-CCC
Q 005864 561 SSNWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP-LPS 636 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 636 (673)
....||+.|+|||++. ...++.++|||||||++|||++|+.||......... ..+.....+ ...
T Consensus 208 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~--------~~~~~~~~~~~~~ 275 (348)
T 1u5q_A 208 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL--------YHIAQNESPALQS 275 (348)
T ss_dssp ----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH--------HHHHHSCCCCCCC
T ss_pred ----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH--------HHHHhcCCCCCCC
Confidence 3457899999999984 567899999999999999999999998643322111 011111111 111
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+..+.+++.+||+.||++|||++|+++
T Consensus 276 ---~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 276 ---GHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp ---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---CCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 122345889999999999999999999975
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=359.42 Aligned_cols=265 Identities=20% Similarity=0.298 Sum_probs=210.9
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC--eeeE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR--HSFL 478 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~l 478 (673)
++|.+.+.||+|+||+||+|++. +|+.||||++...... ...+.+.+|++++++++||||+++++++...+ ..++
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG--SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 56889999999999999999775 5999999998754322 23567889999999999999999999998655 6799
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe----CCCCceEEecccce
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL----SSEYEARVSDFGIA 554 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfg~~ 554 (673)
||||+++|+|.+++........+++..++.++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp EECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 999999999999998765444589999999999999999999999 99999999999999 77788999999999
Q ss_pred eecCCCCCCceeccccccccccccccc--------CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc------
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYT--------MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM------ 620 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~------ 620 (673)
+...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.............
T Consensus 164 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 242 (396)
T 4eut_A 164 RELEDDE-QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (396)
T ss_dssp EECCCGG-GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred eEccCCC-ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence 8765432 2334678999999998865 567889999999999999999999986432211100000
Q ss_pred --ccc---cc------cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 621 --NLS---LN------EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 621 --~~~---~~------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
... .. -.....++............+.+++.+||+.||++||+++|+++.++
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~ 305 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHH
Confidence 000 00 00112233333444677788999999999999999999999998875
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-42 Score=353.95 Aligned_cols=256 Identities=22% Similarity=0.369 Sum_probs=205.9
Q ss_pred HhcCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeec
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSH 472 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 472 (673)
..++|++.+.||+|+||+||+|.+ .+++.||||++.... .....+.+.+|+.++.++ +||||+++++++..
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 457899999999999999999975 246689999987542 223457899999999999 89999999999999
Q ss_pred CCeeeEEEecccCCChHHHHhcCCCC--------------------ccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEec
Q 005864 473 PRHSFLVYECLERGSLAEILSNDGSI--------------------KEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRD 532 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~d 532 (673)
++..++||||+++|+|.+++...... ..+++..+..++.|++.||+|||+. +|+|||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~D 197 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRD 197 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETT
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCC
Confidence 99999999999999999999875421 2378999999999999999999999 999999
Q ss_pred CCCCCeEeCCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcc
Q 005864 533 ISSKNVLLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDF 609 (673)
Q Consensus 533 lk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~ 609 (673)
|||+||+++.++.+||+|||++......... .....+|+.|+|||.+.+..++.++||||||+++|||+| |..||..
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 9999999999999999999999876543322 223456789999999998999999999999999999998 9999874
Q ss_pred cccccccccccccccccccCCC--CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 610 ISLLSSSSSNMNLSLNEILDPR--LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...... ....+... ...+. ..+.++.+++.+||+.||.+|||+.|+++.|+
T Consensus 278 ~~~~~~--------~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 278 IPVDAN--------FYKLIQNGFKMDQPF----YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp CCCSHH--------HHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCcHHH--------HHHHHhcCCCCCCCC----CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 322111 11111111 11111 22345889999999999999999999999885
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=352.15 Aligned_cols=262 Identities=25% Similarity=0.412 Sum_probs=211.8
Q ss_pred cHHHHHHHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchh-----hhhHHHHHHHHHHHHHhcc-CCCcccc
Q 005864 393 VYEEIIRATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLL-----SEISVQREFLNEIKALTEI-RHRNIVK 465 (673)
Q Consensus 393 ~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~~~~e~~~l~~l-~h~niv~ 465 (673)
.+.......++|++.+.||+|+||.||+|.+. +|+.||||++..... ......+.+.+|+.++.++ +||||++
T Consensus 85 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 164 (365)
T 2y7j_A 85 DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIIT 164 (365)
T ss_dssp HHHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred cchhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 44555566778999999999999999999875 799999999865431 1123356788999999999 7999999
Q ss_pred eeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc
Q 005864 466 FYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE 545 (673)
Q Consensus 466 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 545 (673)
+++++...+..++||||+++|+|.+++... ..+++..+..++.||+.||.|||+. +++||||||+||+++.++.
T Consensus 165 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ 238 (365)
T 2y7j_A 165 LIDSYESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQ 238 (365)
T ss_dssp EEEEEEBSSEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCC
T ss_pred EEEEEeeCCEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCC
Confidence 999999999999999999999999999764 3588999999999999999999999 9999999999999999999
Q ss_pred eEEecccceeecCCCCCCceeccccccccccccccc------CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc
Q 005864 546 ARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT------MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN 619 (673)
Q Consensus 546 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~ 619 (673)
+||+|||++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......
T Consensus 239 ikl~DfG~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~------ 311 (365)
T 2y7j_A 239 IRLSDFGFSCHLEPGE-KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI------ 311 (365)
T ss_dssp EEECCCTTCEECCTTC-CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------
T ss_pred EEEEecCcccccCCCc-ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH------
Confidence 9999999998875433 3345679999999998863 35888999999999999999999998642211
Q ss_pred cccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 620 MNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+.......+...+...+..+.+++.+||+.||++|||+.|+++
T Consensus 312 --~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 312 --LMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp --HHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred --HHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111222222221112223456899999999999999999999986
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=349.09 Aligned_cols=257 Identities=22% Similarity=0.366 Sum_probs=192.1
Q ss_pred HhcCCCccceeccCCcEEEEEEEeCC-C---CEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELPS-G---EVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
..++|++.+.||+|+||+||+|.+.. + ..||||+++..... ....+.+.+|++++++++||||+++++++...+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIA-SSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccC-HHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 34679999999999999999998754 3 27999998764322 3346789999999999999999999999987665
Q ss_pred e------eEEEecccCCChHHHHhcCC---CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCce
Q 005864 476 S------FLVYECLERGSLAEILSNDG---SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEA 546 (673)
Q Consensus 476 ~------~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 546 (673)
. ++||||+++|+|.+++.... ....+++..+..++.|+++||+|||+. +|+||||||+||++++++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 5 99999999999999996532 112589999999999999999999999 99999999999999999999
Q ss_pred EEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccc
Q 005864 547 RVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLS 623 (673)
Q Consensus 547 kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~ 623 (673)
||+|||+++....... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ .
T Consensus 177 kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--------~ 248 (323)
T 3qup_A 177 CVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE--------I 248 (323)
T ss_dssp EECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--------H
T ss_pred EEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH--------H
Confidence 9999999987644322 1223456788999999999999999999999999999999 999987433211 1
Q ss_pred cccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 624 LNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 624 ~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+... ....+. ..+.++.+++.+||+.||++|||+.++++.|+
T Consensus 249 ~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 294 (323)
T 3qup_A 249 YNYLIGGNRLKQPP----ECMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294 (323)
T ss_dssp HHHHHTTCCCCCCT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHhcCCCCCCCC----ccCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111111 112121 22345889999999999999999999999886
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=345.87 Aligned_cols=260 Identities=24% Similarity=0.341 Sum_probs=204.1
Q ss_pred cCCCccceeccCCcEEEEEEEe-----CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC--C
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-----PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP--R 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~ 474 (673)
+.|++.+.||+|+||.||+|++ .+|+.||+|++.... .....+.+.+|++++.+++||||+++++++... .
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 98 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 98 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc
Confidence 4588899999999999999983 468999999987543 223457889999999999999999999999876 6
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 99 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 99 GIKLIMEFLPSGSLKEYLPKNK--NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp CEEEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred eEEEEEEeCCCCcHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccc
Confidence 6899999999999999996543 3588999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCC---ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccc------cccccccc-c
Q 005864 555 KFLKPGSSN---WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSS------SSSNMNLS-L 624 (673)
Q Consensus 555 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~------~~~~~~~~-~ 624 (673)
......... .....+|..|+|||.+.+..++.++||||+|+++|||++|..|+........ ........ .
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence 887654332 2345678889999999999999999999999999999999998653211100 00000000 1
Q ss_pred ccccC-CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 625 NEILD-PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 625 ~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..... ...+.+. ..+.++.+++.+||+.||.+|||++|+++.|+
T Consensus 254 ~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 298 (302)
T 4e5w_A 254 NTLKEGKRLPCPP----NCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFE 298 (302)
T ss_dssp HHHHTTCCCCCCT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhccCCCCCCC----CCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 11111 1112221 23346889999999999999999999999986
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=340.69 Aligned_cols=250 Identities=24% Similarity=0.323 Sum_probs=206.5
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||+||+|... ++..||+|++...... ..+.+.+|++++++++||||+++++++.+++..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE---DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc---hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 457899999999999999999775 5789999998764332 356789999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe---CCCCceEEecccceee
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL---SSEYEARVSDFGIAKF 556 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~ 556 (673)
|||+++++|.+++...+ .+++..+..++.|++.||+|||+. +++||||||+||++ +.++.+||+|||++..
T Consensus 85 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~ 158 (277)
T 3f3z_A 85 MELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158 (277)
T ss_dssp EECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EeccCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence 99999999999987653 488999999999999999999999 99999999999999 7788999999999987
Q ss_pred cCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCC
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
..... ......||+.|+|||.+.+ .++.++||||+|+++|||++|+.||...... .....+.......+.
T Consensus 159 ~~~~~-~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~ 228 (277)
T 3f3z_A 159 FKPGK-MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDS--------EVMLKIREGTFTFPE 228 (277)
T ss_dssp CCTTS-CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCH
T ss_pred ccCcc-chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHhCCCCCCc
Confidence 75433 3345678999999998865 4899999999999999999999998743221 112222222333322
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+...+..+.+++.+||+.||++|||+.|+++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 229 KDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred hhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 222234567899999999999999999999875
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=348.58 Aligned_cols=246 Identities=20% Similarity=0.327 Sum_probs=204.8
Q ss_pred HhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhh-----HHHHHHHHHHHHHhccCCCcccceeeeeecC
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEI-----SVQREFLNEIKALTEIRHRNIVKFYGFCSHP 473 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 473 (673)
..++|++.+.||+|+||+||+|.. .+|+.||||++........ ...+.+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 356899999999999999999975 4689999999876532211 1234577899999999999999999999999
Q ss_pred CeeeEEEecccCC-ChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 474 RHSFLVYECLERG-SLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 474 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP---RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999777 9999998753 488999999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCCCceecccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
++....... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||..... .....
T Consensus 176 ~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------------~~~~~ 240 (335)
T 3dls_A 176 SAAYLERGK-LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--------------TVEAA 240 (335)
T ss_dssp TCEECCTTC-CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG--------------GTTTC
T ss_pred cceECCCCC-ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH--------------HHhhc
Confidence 998775443 3345679999999999988776 7899999999999999999999874221 11111
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHH
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQL 670 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~ 670 (673)
...+.. .+.++.+++.+||+.||++|||++|+++.
T Consensus 241 ~~~~~~----~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 241 IHPPYL----VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp CCCSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred cCCCcc----cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 221211 23358899999999999999999999863
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=346.24 Aligned_cols=261 Identities=22% Similarity=0.332 Sum_probs=199.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|... +|+.||+|++.... ......+.+.+|+.++++++||||+++++++..++..++||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 57889999999999999999775 59999999986543 23344677889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 82 e~~~~~~l~~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 82 EYCDHTVLHELDRYQ---RGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp ECCSEEHHHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EeCCCchHHHHHhhh---cCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 999999999988765 3488999999999999999999999 9999999999999999999999999999887655
Q ss_pred CCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccc---c---------ccccc
Q 005864 561 SSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN---L---------SLNEI 627 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~---------~~~~~ 627 (673)
........+++.|+|||.+.+ ..++.++||||+|+++|||++|+.||......+....... . .....
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (311)
T 4agu_A 156 SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY 235 (311)
T ss_dssp ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGG
T ss_pred ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccc
Confidence 444556678999999999876 6689999999999999999999999975432211000000 0 00000
Q ss_pred -cCCCCCCCCc------chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 628 -LDPRLPLPSR------NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 628 -~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+.+.. .....+.++.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0001111000 01123456889999999999999999999985
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=347.74 Aligned_cols=260 Identities=23% Similarity=0.328 Sum_probs=197.8
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|.. .+|+.||+|++...........+.+.+|+.++++++||||+++++++..++..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 5689999999999999999976 479999999987644344556778999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 481 ECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
||+++|+|.+++.... ....+++..++.++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 9999999999997521 124588999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.........+++.|+|||.+.+..++.++||||||+++|||++|+.||....... ......+.....+.. ..
T Consensus 189 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~--~~ 260 (310)
T 2wqm_A 189 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL------YSLCKKIEQCDYPPL--PS 260 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCH------HHHHHHHHTTCSCCC--CT
T ss_pred CCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhH------HHHHHHhhcccCCCC--cc
Confidence 4444445678999999999999999999999999999999999999986422110 000111111111110 01
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+.++.+++.+||+.||++|||++++++.|+
T Consensus 261 ~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~ 293 (310)
T 2wqm_A 261 DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAK 293 (310)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 123346889999999999999999999999886
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-41 Score=338.84 Aligned_cols=248 Identities=25% Similarity=0.409 Sum_probs=207.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|... +++.||+|++...........+.+.+|++++.+++||||+++++++.+++..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 57889999999999999999775 58899999987654444444577899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG---RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp CCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EeCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 9999999999998653 488999999999999999999999 9999999999999999999999999999765432
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
......|++.|+|||.+.+..++.++||||||+++|||++|+.||+.....+ ....+.......+..
T Consensus 168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--------~~~~~~~~~~~~~~~--- 234 (284)
T 2vgo_A 168 --RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE--------THRRIVNVDLKFPPF--- 234 (284)
T ss_dssp --CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHTTCCCCCTT---
T ss_pred --ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH--------HHHHHhccccCCCCc---
Confidence 2344678999999999999999999999999999999999999997432211 111222222222222
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+..+.+++.+||+.||.+|||++|+++
T Consensus 235 -~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 235 -LSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp -SCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -CCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 2345889999999999999999999985
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=339.82 Aligned_cols=250 Identities=26% Similarity=0.425 Sum_probs=206.4
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
++|++.+.||+|+||.||+|.+.+++.||+|++...... .+.+.+|++++.+++||||+++++++.+++..++|||
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS----EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE 83 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC----HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC----HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEe
Confidence 578889999999999999999988999999998764322 3678899999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 158 (267)
T 3t9t_A 84 FMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 158 (267)
T ss_dssp CCTTCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred CCCCCcHHHHHhhCc--ccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccc
Confidence 999999999998653 4578999999999999999999999 99999999999999999999999999998653321
Q ss_pred -CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCCCCCcc
Q 005864 562 -SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPSRN 638 (673)
Q Consensus 562 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 638 (673)
.......+++.|+|||.+.+..++.++||||+|+++|||++ |+.||......+ ....+... ....+.
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------~~~~i~~~~~~~~~~-- 228 (267)
T 3t9t_A 159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--------VVEDISTGFRLYKPR-- 228 (267)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------HHHHHHTTCCCCCCT--
T ss_pred ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH--------HHHHHhcCCcCCCCc--
Confidence 11223456788999999998899999999999999999999 899987432211 11111111 111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+..+.+++.+||+.||++|||++|+++.|+
T Consensus 229 --~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~ 260 (267)
T 3t9t_A 229 --LASTHVYQIMNHCWRERPEDRPAFSRLLRQLA 260 (267)
T ss_dssp --TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --cCcHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 12345889999999999999999999999986
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=348.52 Aligned_cols=256 Identities=23% Similarity=0.358 Sum_probs=206.4
Q ss_pred hcCCCccceeccCCcEEEEEEEe--------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL--------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCS 471 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 471 (673)
.++|++.+.||+|+||+||+|++ .+++.||||++.... .....+.+.+|++++.++ +||||+++++++.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 46789999999999999999976 357789999987542 233567899999999999 8999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCC-------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCe
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGS-------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNV 538 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 538 (673)
.++..++||||+++|+|.+++..... ...+++..++.++.|+++||+|||+. +|+||||||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 188 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 188 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceE
Confidence 99999999999999999999986542 13488999999999999999999999 999999999999
Q ss_pred EeCCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccc
Q 005864 539 LLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSS 615 (673)
Q Consensus 539 ll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~ 615 (673)
+++.++.+||+|||++......... .....+++.|+|||++.+..++.++||||||+++|||++ |+.||......+.
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~ 268 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 268 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHH
Confidence 9999999999999999876543321 223456788999999998899999999999999999999 9999874322111
Q ss_pred cccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 616 SSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
. ....... ....+. ..+..+.+++.+||+.||.+|||+.|+++.|+
T Consensus 269 ~-----~~~~~~~--~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 314 (334)
T 2pvf_A 269 F-----KLLKEGH--RMDKPA----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLD 314 (334)
T ss_dssp H-----HHHHHTC--CCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred H-----HHHhcCC--CCCCCc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 0 0000000 111111 22345889999999999999999999999886
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=340.70 Aligned_cols=253 Identities=22% Similarity=0.340 Sum_probs=204.2
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhh---HHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEI---SVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
++|++.+.||+|+||+||+|... +|+.||+|.++....... ...+.+.+|+.++++++||||+++++++.+++..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56889999999999999999876 699999999876432221 13578899999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC----ceEEecccc
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY----EARVSDFGI 553 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg~ 553 (673)
+||||+++++|.+++... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++ .+||+|||+
T Consensus 85 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 999999999999999764 3588999999999999999999999 999999999999998877 799999999
Q ss_pred eeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
+....... ......+++.|+|||.+.+..++.++||||||+++|||++|+.||......+ ....+......
T Consensus 159 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~ 229 (283)
T 3bhy_A 159 AHKIEAGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE--------TLTNISAVNYD 229 (283)
T ss_dssp CEECC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--------HHHHHHTTCCC
T ss_pred ceeccCCC-cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH--------HHHHhHhcccC
Confidence 98765432 2344568999999999998899999999999999999999999987432211 11111111222
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.......+..+.+++.+||+.||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 230 FDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp CCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 221122233456899999999999999999999986
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-41 Score=345.95 Aligned_cols=262 Identities=25% Similarity=0.359 Sum_probs=197.0
Q ss_pred HHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc--CCCcccceeeeeecC---
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI--RHRNIVKFYGFCSHP--- 473 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~~~~~~~--- 473 (673)
...++|++.+.||+|+||.||+|+.. |+.||||++.... ...+..|.+++... +||||+++++++...
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 106 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE------EASWFRETEIYQTVLMRHENILGFIAADIKGTGS 106 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc------cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence 34578999999999999999999885 8999999985431 23344455555554 899999999999876
Q ss_pred -CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcC-----CCCeEEecCCCCCeEeCCCCceE
Q 005864 474 -RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDC-----FPPIVHRDISSKNVLLSSEYEAR 547 (673)
Q Consensus 474 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~k 547 (673)
...++||||+++|+|.++++.. .+++..+..++.|++.||+|||+.+ .++|+||||||+||+++.++.+|
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred CCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence 6789999999999999999764 4889999999999999999999762 23899999999999999999999
Q ss_pred EecccceeecCCCCCC----ceecccccccccccccccCCcCcc------hhHHHHHHHHHHHHhC----------CCCC
Q 005864 548 VSDFGIAKFLKPGSSN----WTEFAGTFGYVAPELAYTMKVTEK------CDVYSFGVLALEVIKG----------KHPR 607 (673)
Q Consensus 548 l~Dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~------~Dv~slG~il~el~~g----------~~p~ 607 (673)
|+|||++......... .....||+.|+|||++.+...+.+ +|||||||++|||++| +.||
T Consensus 183 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~ 262 (337)
T 3mdy_A 183 IADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPY 262 (337)
T ss_dssp ECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccH
Confidence 9999999876543322 124578999999999987766654 9999999999999999 4554
Q ss_pred cccccccccccccc-cccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 608 DFISLLSSSSSNMN-LSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 608 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.............. ........+..+. .......+.++.+++.+||+.||++|||+.|+++.|+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 327 (337)
T 3mdy_A 263 HDLVPSDPSYEDMREIVCIKKLRPSFPN-RWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLA 327 (337)
T ss_dssp TTTSCSSCCHHHHHHHHTTSCCCCCCCG-GGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred hhhcCCCCchhhhHHHHhhhccCccccc-cchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHH
Confidence 32211110000000 0000111111111 0112356778999999999999999999999999986
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=365.21 Aligned_cols=252 Identities=25% Similarity=0.429 Sum_probs=201.4
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.++|++.+.||+|+||+||+|.+.++..||||+++.... ..+.|.+|++++++++||||+++++++.+ +..++||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~ 257 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEe
Confidence 457888999999999999999998888999999875432 24678999999999999999999999876 6789999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++.....
T Consensus 258 e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 333 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 333 (452)
T ss_dssp CCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred hhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence 9999999999997532 13478899999999999999999999 9999999999999999999999999999876433
Q ss_pred CC-CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccC-CCCCCCCc
Q 005864 561 SS-NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILD-PRLPLPSR 637 (673)
Q Consensus 561 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 637 (673)
.. ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+. ...+.. .+++.+.
T Consensus 334 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~--------~~~i~~~~~~~~~~- 404 (452)
T 1fmk_A 334 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------LDQVERGYRMPCPP- 404 (452)
T ss_dssp ---------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--------HHHHHTTCCCCCCT-
T ss_pred ceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHH--------HHHHHcCCCCCCCC-
Confidence 22 1233456789999999998999999999999999999999 9999874322111 111111 1222222
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+..+.+++.+||+.||++|||++++++.|++
T Consensus 405 ---~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~ 437 (452)
T 1fmk_A 405 ---ECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 437 (452)
T ss_dssp ---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 234468899999999999999999999999864
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=342.84 Aligned_cols=258 Identities=24% Similarity=0.399 Sum_probs=194.4
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.++|++.+.||+|+||+||+|+.. ..||+|+++.... .....+.+.+|+.++++++||||+++++++ .....++||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAP-TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCC-CHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 467999999999999999999874 3599999875432 334567899999999999999999999976 455689999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 99 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 99 QWCEGSSLYHHLHASE--TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp ECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred EecCCCcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccc
Confidence 9999999999997653 4589999999999999999999999 9999999999999999999999999999865432
Q ss_pred --CCCceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC
Q 005864 561 --SSNWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635 (673)
Q Consensus 561 --~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
........||+.|+|||.+. +..++.++||||+|+++|||++|+.||......+... .........+...
T Consensus 174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~-- 248 (289)
T 3og7_A 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQII---EMVGRGSLSPDLS-- 248 (289)
T ss_dssp ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHH---HHHHHTSCCCCTT--
T ss_pred cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHH---HHhcccccCcchh--
Confidence 22234467899999999986 6678889999999999999999999997432211100 0000001111111
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
......+..+.+++.+||+.||.+|||++|+++.|++
T Consensus 249 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~ 285 (289)
T 3og7_A 249 -KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEE 285 (289)
T ss_dssp -SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 1112234568999999999999999999999999863
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=353.28 Aligned_cols=252 Identities=24% Similarity=0.293 Sum_probs=194.5
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||+||+|+.. +|+.||||++...... .+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 94 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----DENVQREIINHRSLRHPNIVRFKEVILTPTHLAII 94 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS----CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc----cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEE
Confidence 357999999999999999999775 7999999998754322 35678999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc--eEEecccceeec
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE--ARVSDFGIAKFL 557 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~~~~~ 557 (673)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++..
T Consensus 95 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~ 168 (361)
T 3uc3_A 95 MEYASGGELYERICNAG---RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSS 168 (361)
T ss_dssp EECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred EEeCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence 99999999999997653 488999999999999999999999 9999999999999987765 999999999754
Q ss_pred CCCCCCceecccccccccccccccCCcCcc-hhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCC
Q 005864 558 KPGSSNWTEFAGTFGYVAPELAYTMKVTEK-CDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
... .......||+.|+|||++.+..++.+ +||||+||++|||++|+.||......... ......+.......+.
T Consensus 169 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~----~~~~~~~~~~~~~~~~ 243 (361)
T 3uc3_A 169 VLH-SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY----RKTIQRILSVKYSIPD 243 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCH----HHHHHHHHTTCCCCCT
T ss_pred ccc-CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHH----HHHHHHHhcCCCCCCC
Confidence 322 22344679999999999988887665 89999999999999999999754322111 1111222222222221
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
. ...+.++.+++.+||+.||++|||+.|+++
T Consensus 244 ~--~~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 244 D--IRISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp T--SCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred c--CCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 1 112345889999999999999999999985
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-41 Score=355.27 Aligned_cols=251 Identities=23% Similarity=0.316 Sum_probs=192.4
Q ss_pred cCCCcc-ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhc-cCCCcccceeeeeec----CC
Q 005864 402 KNFDAE-QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTE-IRHRNIVKFYGFCSH----PR 474 (673)
Q Consensus 402 ~~~~~~-~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~----~~ 474 (673)
++|.+. +.||+|+||+||+|... +|+.||||++... ..+.+|++++.+ .+||||+++++++.. .+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~ 132 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 132 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCc
Confidence 355555 68999999999999765 6899999998532 345678887754 489999999999865 56
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC---CCceEEecc
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS---EYEARVSDF 551 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Df 551 (673)
..++||||+++|+|.+++...+. ..+++..+..++.||+.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 133 ~~~lv~E~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DF 208 (400)
T 1nxk_A 133 CLLIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 208 (400)
T ss_dssp EEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred EEEEEEEeCCCCcHHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEec
Confidence 78999999999999999987532 4589999999999999999999999 9999999999999997 788999999
Q ss_pred cceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
|+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ......+....
T Consensus 209 G~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~----~~~~~~i~~~~ 283 (400)
T 1nxk_A 209 GFAKETTSH-NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----PGMKTRIRMGQ 283 (400)
T ss_dssp TTCEECC------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSC----CSHHHHHHHTC
T ss_pred ccccccCCC-CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcccccc----HHHHHHHHcCc
Confidence 999876432 2234567899999999999999999999999999999999999999743322110 00111122222
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+...+...+.++.+++.+||+.||++|||+.|+++
T Consensus 284 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 284 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp CCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 22222222344556899999999999999999999986
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-42 Score=348.10 Aligned_cols=254 Identities=25% Similarity=0.410 Sum_probs=208.5
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
..++|++.+.||+|+||+||+|.+. +++.||+|.+.... ...+.+.+|+.++++++||||+++++++.+++..++
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 86 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT----MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS----THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH----HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence 4567889999999999999999776 48899999986532 236778999999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
||||+++++|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 87 v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp EEECCTTEEHHHHHHHCCT-TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred EEEcCCCCcHHHHHHhccc-CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 9999999999999987543 4589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCCCCC
Q 005864 559 PGSSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636 (673)
Q Consensus 559 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
..... .....+++.|+|||.+.+..++.++||||+|+++|+|++ |..||........ ........ ....+
T Consensus 163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~-----~~~~~~~~--~~~~~- 234 (288)
T 3kfa_A 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-----YELLEKDY--RMERP- 234 (288)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH-----HHHHHTTC--CCCCC-
T ss_pred CCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-----HHHHhccC--CCCCC-
Confidence 43322 223456788999999998899999999999999999999 9999874322111 00111111 11111
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+..+.+++.+||+.||++|||++|+++.|+
T Consensus 235 ---~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~ 267 (288)
T 3kfa_A 235 ---EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 267 (288)
T ss_dssp ---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHH
Confidence 122346889999999999999999999999885
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=342.92 Aligned_cols=255 Identities=18% Similarity=0.251 Sum_probs=205.0
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 479 (673)
++|++.+.||+|+||+||+|.. .+|+.||||++.... ..+.+.+|+.++..+ +|+|++++++++..+...++|
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 5789999999999999999976 579999999886432 134577899999999 799999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc-----eEEecccce
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE-----ARVSDFGIA 554 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfg~~ 554 (673)
|||+ +++|.+++...+ ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 85 ~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~ 158 (298)
T 1csn_A 85 IDLL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158 (298)
T ss_dssp EECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred EEec-CCCHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence 9999 999999998754 3589999999999999999999999 9999999999999987776 999999999
Q ss_pred eecCCCCC-------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccc
Q 005864 555 KFLKPGSS-------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEI 627 (673)
Q Consensus 555 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 627 (673)
........ ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........ ......+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-----~~~~~~~ 233 (298)
T 1csn_A 159 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN-----KQKYERI 233 (298)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH-----HHHHHHH
T ss_pred cccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc-----HHHHHHH
Confidence 98754332 12446789999999999999999999999999999999999999975322111 0000000
Q ss_pred cCCCCCCC-CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 628 LDPRLPLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 628 ~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.......+ .......+.++.+++.+||+.||++|||++++++.|+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~ 279 (298)
T 1csn_A 234 GEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 279 (298)
T ss_dssp HHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred HhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 00000000 0001123456899999999999999999999999886
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-42 Score=355.77 Aligned_cols=261 Identities=17% Similarity=0.232 Sum_probs=200.3
Q ss_pred hcCCCccceeccCCcEEEEEEEeCC------CCEEEEEeeccchhhhhHH--------HHHHHHHHHHHhccCCCcccce
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPS------GEVVAVKKFHSLLLSEISV--------QREFLNEIKALTEIRHRNIVKF 466 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~--------~~~~~~e~~~l~~l~h~niv~l 466 (673)
.++|++.+.||+|+||+||+|.+.. ++.||||++.........+ ...+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4579999999999999999997754 4789999986543211111 1234556777888899999999
Q ss_pred eeeeecC----CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeC-
Q 005864 467 YGFCSHP----RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS- 541 (673)
Q Consensus 467 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~- 541 (673)
++++... ...++||||+ +++|.+++.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA--KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEES
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEec
Confidence 9998764 4579999999 999999998753 4589999999999999999999999 999999999999999
Q ss_pred -CCCceEEecccceeecCCCCCC-------ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccc
Q 005864 542 -SEYEARVSDFGIAKFLKPGSSN-------WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLL 613 (673)
Q Consensus 542 -~~~~~kl~Dfg~~~~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 613 (673)
.++.+||+|||+++.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 8899999999999876433211 13345999999999999999999999999999999999999999742211
Q ss_pred cccccc----cccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 614 SSSSSN----MNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 614 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...... ......+.+++.++. ...+.++.+++..||+.||++||+++++++.|+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~ 325 (364)
T 3op5_A 268 PKYVRDSKIRYRENIASLMDKCFPA-----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILL 325 (364)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHSCT-----TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHhccc-----ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 100000 001111122211110 012346889999999999999999999999885
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=353.06 Aligned_cols=251 Identities=26% Similarity=0.405 Sum_probs=191.9
Q ss_pred CCCccceeccCCcEEEEEEEeC--CC--CEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec-CCeee
Q 005864 403 NFDAEQCIGIGGQASVYRGELP--SG--EVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH-PRHSF 477 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~ 477 (673)
.|++.+.||+|+||+||+|.+. ++ ..||||.+... ......+.+.+|+.++++++||||+++++++.+ ++..+
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~ 167 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 167 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC--SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence 4667789999999999999763 22 36899988653 233457889999999999999999999999754 56789
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 168 lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 242 (373)
T 3c1x_A 168 VVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 242 (373)
T ss_dssp EEEECCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEEECCCCCCHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccc
Confidence 9999999999999998654 4578899999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCC----CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCC-
Q 005864 558 KPGSS----NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPR- 631 (673)
Q Consensus 558 ~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 631 (673)
..... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||......+. ...+....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~--------~~~~~~~~~ 314 (373)
T 3c1x_A 243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI--------TVYLLQGRR 314 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH--------HHHHHTTCC
T ss_pred cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH--------HHHHHcCCC
Confidence 43221 1233456789999999999999999999999999999999 6777764322111 11111111
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+. ..+..+.+++.+||+.||++|||++|+++.|+
T Consensus 315 ~~~p~----~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~ 351 (373)
T 3c1x_A 315 LLQPE----YCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 351 (373)
T ss_dssp CCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111 22345889999999999999999999999886
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-41 Score=345.74 Aligned_cols=252 Identities=27% Similarity=0.462 Sum_probs=198.6
Q ss_pred cCCCccceeccCCcEEEEEEEeCC-----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS-----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
.+|...+.||+|+||+||+|.... +..||||.++... .......+.+|+.++.+++||||+++++++...+..
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 121 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM 121 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence 456678999999999999997642 2469999987542 233466799999999999999999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 122 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 122 MIITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEEeCCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 99999999999999998653 4588999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-C
Q 005864 557 LKPGSSN---WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-R 631 (673)
Q Consensus 557 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~ 631 (673)
....... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+.+. +
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~--------~~~~~~~~~~ 268 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE--------VMKAINDGFR 268 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------HHHHHHTTCC
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH--------HHHHHHCCCc
Confidence 6543221 122345788999999998899999999999999999999 999986432211 11111111 1
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+.+. ..+..+.+++.+||+.||++||++.|+++.|+
T Consensus 269 ~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 305 (333)
T 1mqb_A 269 LPTPM----DCPSAIYQLMMQCWQQERARRPKFADIVSILD 305 (333)
T ss_dssp CCCCT----TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCcc----cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 22222 23345889999999999999999999999886
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-42 Score=358.29 Aligned_cols=245 Identities=14% Similarity=0.135 Sum_probs=192.8
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHH---HHHhccCCCccccee-------ee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEI---KALTEIRHRNIVKFY-------GF 469 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~---~~l~~l~h~niv~l~-------~~ 469 (673)
.++|.+.+.||+|+||+||+|.+ .+|+.||||++...........+.+.+|+ ..+++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 35788899999999999999986 46999999999765444444578899999 555566899999998 55
Q ss_pred eecCC-----------------eeeEEEecccCCChHHHHhcCC----CCccchHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 005864 470 CSHPR-----------------HSFLVYECLERGSLAEILSNDG----SIKEFSWIVRTNVIKSVANALSYMHHDCFPPI 528 (673)
Q Consensus 470 ~~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 528 (673)
+..++ ..++||||+ +|+|.+++...+ ....+++..+..|+.||+.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 55443 278999999 579999997642 123466788999999999999999999 99
Q ss_pred EEecCCCCCeEeCCCCceEEecccceeecCCCCCCceecccccccccccccccC-----------CcCcchhHHHHHHHH
Q 005864 529 VHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTM-----------KVTEKCDVYSFGVLA 597 (673)
Q Consensus 529 vH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----------~~~~~~Dv~slG~il 597 (673)
+||||||+||+++.++.+||+|||+++... .......| +.|+|||++.+. .++.++|||||||++
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~---~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il 303 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG---ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVI 303 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT---CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC---CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHH
Confidence 999999999999999999999999998643 23344567 999999999887 899999999999999
Q ss_pred HHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 598 LEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 598 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
|||++|+.||....... ....+... . . ..+.++.+++.+||+.||++|||+.|+++
T Consensus 304 ~elltg~~Pf~~~~~~~--------~~~~~~~~-~---~----~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 304 YWIWCADLPITKDAALG--------GSEWIFRS-C---K----NIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHSSCCC------C--------CSGGGGSS-C---C----CCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHCCCCCccccccc--------chhhhhhh-c---c----CCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99999999987432211 11111111 1 1 11245889999999999999999999985
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-42 Score=354.84 Aligned_cols=257 Identities=24% Similarity=0.382 Sum_probs=206.8
Q ss_pred HHhcCCCccceeccCCcEEEEEEEeCC------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeee
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGELPS------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCS 471 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 471 (673)
...++|++.+.||+|+||+||+|.... ++.||+|.+.... .....+.+.+|+.++.++ +||||+++++++.
T Consensus 43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 345789999999999999999997642 3479999987643 233467899999999999 8999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCC-----------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGS-----------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL 540 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill 540 (673)
+++..++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEE
Confidence 99999999999999999999975321 23478999999999999999999999 99999999999999
Q ss_pred CCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccc
Q 005864 541 SSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSS 617 (673)
Q Consensus 541 ~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~ 617 (673)
+.++.+||+|||++......... .....+++.|+|||.+.+..++.++||||||+++|||++ |..||........
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~-- 275 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK-- 275 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH--
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH--
Confidence 99999999999999866443322 223456789999999998899999999999999999998 9999874321111
Q ss_pred cccccccccccCCC--CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 618 SNMNLSLNEILDPR--LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 618 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
........ ...+. ..+..+.+++.+||+.||.+|||+.|+++.|+
T Consensus 276 ------~~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 322 (333)
T 2i1m_A 276 ------FYKLVKDGYQMAQPA----FAPKNIYSIMQACWALEPTHRPTFQQICSFLQ 322 (333)
T ss_dssp ------HHHHHHHTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ------HHHHHhcCCCCCCCC----CCCHHHHHHHHHHhccChhhCcCHHHHHHHHH
Confidence 11111111 11111 12345889999999999999999999999885
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-41 Score=353.54 Aligned_cols=248 Identities=23% Similarity=0.362 Sum_probs=198.5
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC--CCcccceeeeeecCCeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR--HRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv 479 (673)
..|++.+.||+|+||+||+|...+++.||||++..... .....+.+.+|+.++.+++ ||||+++++++..++..++|
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 45999999999999999999988899999999875432 3345678999999999996 59999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|| +.+++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++ ++.+||+|||+++.+..
T Consensus 135 ~E-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp EE-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred Ee-cCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 99 67889999998753 578889999999999999999999 999999999999996 57999999999987654
Q ss_pred CCC--Cceeccccccccccccccc-----------CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccc
Q 005864 560 GSS--NWTEFAGTFGYVAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNE 626 (673)
Q Consensus 560 ~~~--~~~~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 626 (673)
... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .......
T Consensus 207 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-------~~~~~~~ 279 (390)
T 2zmd_A 207 DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKLHA 279 (390)
T ss_dssp -------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC-------HHHHHHH
T ss_pred CCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH-------HHHHHHH
Confidence 332 2244679999999999865 4688999999999999999999999963211 0111222
Q ss_pred ccCCCCC--CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 627 ILDPRLP--LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 627 ~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
++++... .+... +.++.+++.+||+.||++|||+.|+++
T Consensus 280 ~~~~~~~~~~~~~~----~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 280 IIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp HHCTTSCCCCCCCS----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhCccccCCCCccc----hHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 3332222 12111 345889999999999999999999985
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=350.16 Aligned_cols=249 Identities=23% Similarity=0.364 Sum_probs=197.3
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCC--CcccceeeeeecCCeeeE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH--RNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~l 478 (673)
.+.|++.+.||+|+||+||+|...+++.||||++..... .....+.+.+|+.++.+++| |||+++++++..++..++
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 86 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 86 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeecccc-chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEE
Confidence 356889999999999999999998999999999875432 33446789999999999986 999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
||| +.+|+|.+++...+ .+++.++..++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++...
T Consensus 87 v~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 87 VME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EEC-CCSEEHHHHHHHSC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred EEe-CCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 999 56789999998753 588899999999999999999999 999999999999997 5789999999998765
Q ss_pred CCCC--Cceeccccccccccccccc-----------CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccc
Q 005864 559 PGSS--NWTEFAGTFGYVAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625 (673)
Q Consensus 559 ~~~~--~~~~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 625 (673)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ......
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-------~~~~~~ 231 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-------QISKLH 231 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS-------HHHHHH
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh-------HHHHHH
Confidence 4332 2235679999999999865 6789999999999999999999999863211 011112
Q ss_pred cccCCCCC--CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 EILDPRLP--LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ~~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+++... .+... +.++.+++.+||+.||.+|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~----~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 232 AIIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp HHHCTTSCCCCCCCS----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhcCCcccCCcccC----CHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 22222221 11111 235889999999999999999999985
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-42 Score=351.31 Aligned_cols=260 Identities=18% Similarity=0.276 Sum_probs=194.3
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||+|+||+||+|... +|+.||+|++...... .....+.+|+.++++++||||+++++++..++..++||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc--ccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence 46889999999999999999775 7999999998654221 12234567999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++ +|.+++...+ ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 80 e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 153 (324)
T 3mtl_A 80 EYLDK-DLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153 (324)
T ss_dssp ECCSE-EHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred ccccc-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence 99985 9999988754 4588999999999999999999999 9999999999999999999999999999876544
Q ss_pred CCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-------cccccccccc----
Q 005864 561 SSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-------NMNLSLNEIL---- 628 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-------~~~~~~~~~~---- 628 (673)
........+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+.... .....+....
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchh
Confidence 444455678999999999876 5689999999999999999999999975332111000 0000000000
Q ss_pred -----CCCCCCCC--cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 629 -----DPRLPLPS--RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 629 -----~~~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+...... ......+.++.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000000 001122356889999999999999999999975
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=368.46 Aligned_cols=253 Identities=25% Similarity=0.387 Sum_probs=211.3
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||+||+|... +|+.||||++...........+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 357899999999999999999775 7999999998765443344567899999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe---CCCCceEEecccceee
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL---SSEYEARVSDFGIAKF 556 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~ 556 (673)
|||+.+|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++..
T Consensus 105 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK---RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp ECCCCSCBHHHHHHTCS---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred EecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 99999999999998653 488999999999999999999999 99999999999999 5678999999999987
Q ss_pred cCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCC
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
..... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .....+.......+.
T Consensus 179 ~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~~~~ 248 (484)
T 3nyv_A 179 FEASK-KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEY--------DILKKVEKGKYTFEL 248 (484)
T ss_dssp BCCCC-SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCS
T ss_pred ccccc-ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCCCCCCC
Confidence 65432 3345679999999999866 6899999999999999999999999743321 112222233333333
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+...+.++.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 249 PQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 344455667999999999999999999999985
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=336.19 Aligned_cols=251 Identities=25% Similarity=0.353 Sum_probs=203.6
Q ss_pred cCCCccc-eeccCCcEEEEEEEeC---CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQ-CIGIGGQASVYRGELP---SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~-~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
++|.+.+ .||+|+||+||+|.+. +++.||||+++... .....+.+.+|++++.+++||||+++++++ ..+..+
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~ 85 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALM 85 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc--chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcE
Confidence 3455555 8999999999999753 57889999997642 334567899999999999999999999999 456689
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++++|.+++.... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 86 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 86 LVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEEECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEeCCCCCHHHHHHhCC--ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 9999999999999997543 4589999999999999999999999 9999999999999999999999999999887
Q ss_pred CCCCCC---ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CC
Q 005864 558 KPGSSN---WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RL 632 (673)
Q Consensus 558 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 632 (673)
...... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+. ...+... ..
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~--------~~~i~~~~~~ 232 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV--------MAFIEQGKRM 232 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH--------HHHHHTTCCC
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH--------HHHHhcCCcC
Confidence 543322 123346789999999988889999999999999999998 9999874322111 1111111 11
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+. ..+.++.+++.+||+.||++||++.|+++.|+
T Consensus 233 ~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 268 (287)
T 1u59_A 233 ECPP----ECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 268 (287)
T ss_dssp CCCT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC----CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1221 23446899999999999999999999999885
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-41 Score=335.82 Aligned_cols=249 Identities=25% Similarity=0.423 Sum_probs=198.2
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||+|+||.||+|... +|+.||||.+...........+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 57889999999999999999875 79999999987654444445678999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++...+ .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 91 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 91 EYVSGGELFDYICKHG---RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp ECCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred eccCCCcHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 9999999999997653 478899999999999999999999 9999999999999999999999999999876433
Q ss_pred CCCceecccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
. ......+++.|+|||.+.+..+ +.++||||+|+++|||++|+.||+...... ....+.......+..
T Consensus 165 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~~~~-- 233 (276)
T 2h6d_A 165 E-FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT--------LFKKIRGGVFYIPEY-- 233 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCCCCCTT--
T ss_pred c-ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH--------HHHHhhcCcccCchh--
Confidence 2 2234568999999999987765 689999999999999999999987432211 111111111122211
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+..+.+++.+||+.||++|||++|+++
T Consensus 234 --~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 234 --LNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp --SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred --cCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 2345889999999999999999999986
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-41 Score=342.31 Aligned_cols=258 Identities=24% Similarity=0.341 Sum_probs=204.1
Q ss_pred CCccceeccCCcEEEEEEEeC-----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--CCee
Q 005864 404 FDAEQCIGIGGQASVYRGELP-----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH--PRHS 476 (673)
Q Consensus 404 ~~~~~~ig~G~~g~vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 476 (673)
|++.+.||+|+||+||++.+. +|+.||||+++.. ......+.+.+|++++++++||||+++++++.+ ....
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 110 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASL 110 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc--cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceE
Confidence 488999999999999988642 6889999999764 223456789999999999999999999999987 4578
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||+++|+|.+++.... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 111 QLVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EEEECCCTTCBHHHHGGGSC----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEecccCCcHHHHHhhCC----CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccc
Confidence 99999999999999997653 88999999999999999999999 999999999999999999999999999998
Q ss_pred cCCCCCC---ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccc----c--ccccccccccc
Q 005864 557 LKPGSSN---WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSS----S--SSNMNLSLNEI 627 (673)
Q Consensus 557 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~----~--~~~~~~~~~~~ 627 (673)
....... .....++..|+|||.+.+..++.++||||+|+++|||++|+.||........ . .........+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (318)
T 3lxp_A 184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL 263 (318)
T ss_dssp CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHH
Confidence 7654322 2334578889999999998999999999999999999999999864321100 0 00000011111
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+......+ .....+.++.+++.+||+.||++|||++|+++.|+
T Consensus 264 ~~~~~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 306 (318)
T 3lxp_A 264 LERGERLP--RPDKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306 (318)
T ss_dssp HHTTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HhcccCCC--CCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHH
Confidence 11111111 11123346899999999999999999999999886
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=348.59 Aligned_cols=262 Identities=21% Similarity=0.344 Sum_probs=209.8
Q ss_pred HHHHHhcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeee
Q 005864 396 EIIRATKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGF 469 (673)
Q Consensus 396 ~~~~~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 469 (673)
++....++|++.+.||+|+||.||+|.+. +++.||+|.+.... .......+.+|+.+++.++||||++++++
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 96 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGV 96 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCCEeeeEEE
Confidence 34445678999999999999999999654 47889999987542 23345678999999999999999999999
Q ss_pred eecCCeeeEEEecccCCChHHHHhcCC-------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC
Q 005864 470 CSHPRHSFLVYECLERGSLAEILSNDG-------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS 542 (673)
Q Consensus 470 ~~~~~~~~lv~e~~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 542 (673)
+.+++..++||||+++|+|.+++...+ ....+++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 97 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~ 173 (322)
T 1p4o_A 97 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 173 (322)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECT
T ss_pred EccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcC
Confidence 999999999999999999999997532 123468899999999999999999999 9999999999999999
Q ss_pred CCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccc
Q 005864 543 EYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSN 619 (673)
Q Consensus 543 ~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~ 619 (673)
++.+||+|||++......... .....+++.|+|||.+.+..++.++||||+|+++|||++ |+.||......+
T Consensus 174 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~----- 248 (322)
T 1p4o_A 174 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----- 248 (322)
T ss_dssp TCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH-----
T ss_pred CCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHH-----
Confidence 999999999999865432211 123456789999999998899999999999999999999 899987432211
Q ss_pred cccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 620 MNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....+......... ...+..+.+++.+||+.||++|||+.|+++.|++
T Consensus 249 ---~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~ 296 (322)
T 1p4o_A 249 ---VLRFVMEGGLLDKP---DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296 (322)
T ss_dssp ---HHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGG
T ss_pred ---HHHHHHcCCcCCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 11111111111111 1223458899999999999999999999999863
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=342.60 Aligned_cols=247 Identities=21% Similarity=0.386 Sum_probs=198.8
Q ss_pred cCCCccceeccCCcEEEEEEEeCC-C-------CEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS-G-------EVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP 473 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 473 (673)
++|.+.+.||+|+||+||+|.... + +.||+|.+.... ....+.+.+|+.++++++||||+++++++.++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH---RNYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG---GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc---HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 578889999999999999996643 3 479999986532 23467899999999999999999999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc--------
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE-------- 545 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-------- 545 (673)
+..++||||+++|+|.+++...+ ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKKNK--NCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHHTG--GGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred CCCEEEEECCCCCCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccce
Confidence 99999999999999999998753 4488999999999999999999999 9999999999999998887
Q ss_pred eEEecccceeecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCC-Ccccccccccccccccc
Q 005864 546 ARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHP-RDFISLLSSSSSNMNLS 623 (673)
Q Consensus 546 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p-~~~~~~~~~~~~~~~~~ 623 (673)
+||+|||++..... .....+++.|+|||.+.+ ..++.++||||||+++|||++|..| |........
T Consensus 160 ~kl~Dfg~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~-------- 227 (289)
T 4fvq_A 160 IKLSDPGISITVLP----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK-------- 227 (289)
T ss_dssp EEECCCCSCTTTSC----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--------
T ss_pred eeeccCcccccccC----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHH--------
Confidence 99999999864422 234567899999999987 6789999999999999999996554 432211100
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 624 LNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..........+... +.++.+++.+||+.||++|||++|+++.|++
T Consensus 228 -~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 272 (289)
T 4fvq_A 228 -LQFYEDRHQLPAPK----AAELANLINNCMDYEPDHRPSFRAIIRDLNS 272 (289)
T ss_dssp -HHHHHTTCCCCCCS----SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHT
T ss_pred -HHHhhccCCCCCCC----CHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 00011111111111 2247899999999999999999999999874
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=348.39 Aligned_cols=252 Identities=25% Similarity=0.371 Sum_probs=198.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCE----EEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEV----VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
++|++.+.||+|+||+||+|.+. +|+. ||+|.+.... .....+.+.+|+.++.+++||||+++++++. ++..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 89 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSL 89 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT--SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc--cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCcc
Confidence 46888999999999999999764 4554 7788765432 1222456778999999999999999999986 4568
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++|+||+++|+|.+++...+ ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 90 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 164 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQHR--GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADL 164 (325)
T ss_dssp EEEEECCTTCBSHHHHHSSG--GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred EEEEEeCCCCCHHHHHHHcc--ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccc
Confidence 89999999999999998653 4688899999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCC
Q 005864 557 LKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 557 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
...... ......++..|+|||++.+..++.++||||||+++|||++ |+.||......+.. ..... .....
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-----~~~~~--~~~~~ 237 (325)
T 3kex_A 165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP-----DLLEK--GERLA 237 (325)
T ss_dssp SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHH-----HHHHT--TCBCC
T ss_pred cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHH-----HHHHc--CCCCC
Confidence 654332 2344567889999999999999999999999999999999 99999743221110 00000 00111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+.. .+.++.+++.+||+.||++|||++|+++.|+
T Consensus 238 ~~~~----~~~~~~~li~~~l~~dp~~Rps~~el~~~l~ 272 (325)
T 3kex_A 238 QPQI----CTIDVYMVMVKCWMIDENIRPTFKELANEFT 272 (325)
T ss_dssp CCTT----BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHH
T ss_pred CCCc----CcHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111 2224778999999999999999999999885
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-41 Score=344.13 Aligned_cols=259 Identities=20% Similarity=0.343 Sum_probs=199.1
Q ss_pred cCCCcc-ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeE
Q 005864 402 KNFDAE-QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 402 ~~~~~~-~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 478 (673)
+.|++. +.||+|+||+||+|... +|+.||||++.... ....+.+.+|++++.++ +||||+++++++.+++..++
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l 88 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS---SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc---chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 467774 78999999999999764 79999999986542 22356788999999985 79999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc---eEEeccccee
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE---ARVSDFGIAK 555 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~~~ 555 (673)
||||+++|+|.+++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++.
T Consensus 89 v~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~ 162 (316)
T 2ac3_A 89 VFEKMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGS 162 (316)
T ss_dssp EEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred EEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence 99999999999999865 3488899999999999999999999 9999999999999998776 9999999997
Q ss_pred ecCCCCC-------Cceeccccccccccccccc-----CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc----
Q 005864 556 FLKPGSS-------NWTEFAGTFGYVAPELAYT-----MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN---- 619 (673)
Q Consensus 556 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~---- 619 (673)
....... ......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+.....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 242 (316)
T 2ac3_A 163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242 (316)
T ss_dssp -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CC
T ss_pred ccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccc
Confidence 6542211 1223458999999999875 56889999999999999999999999753321110000
Q ss_pred ---cccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 620 ---MNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 620 ---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.......+.......+...+...+.++.+++.+||+.||++|||++|+++
T Consensus 243 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 00111222223333322222234557899999999999999999999986
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-41 Score=373.79 Aligned_cols=251 Identities=20% Similarity=0.259 Sum_probs=213.1
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeee
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 477 (673)
..++|++.+.||+|+||+||+|+.. +++.||||+++..........+.+..|..++..+ +||+|+++++++.+.+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 3467999999999999999999765 6889999999865444444567788999999988 7999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 419 lV~E~~~gg~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG---RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEeCcCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 9999999999999998753 488999999999999999999999 9999999999999999999999999999875
Q ss_pred CCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 558 KPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
...........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ......++......+..
T Consensus 493 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~--------~~~~~~i~~~~~~~p~~ 564 (674)
T 3pfq_A 493 IWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--------DELFQSIMEHNVAYPKS 564 (674)
T ss_dssp CCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHSSCCCCCTT
T ss_pred ccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH--------HHHHHHHHhCCCCCCcc
Confidence 5444455667899999999999999999999999999999999999999974322 22334444445444432
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCH-----HHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTM-----QTVC 668 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~-----~~v~ 668 (673)
.+.++.+++.+||+.||++||++ +|++
T Consensus 565 ----~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~ 596 (674)
T 3pfq_A 565 ----MSKEAVAICKGLMTKHPGKRLGCGPEGERDIK 596 (674)
T ss_dssp ----SCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHH
T ss_pred ----CCHHHHHHHHHHccCCHHHCCCCCCCcHHHHh
Confidence 33458899999999999999997 6665
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-41 Score=344.76 Aligned_cols=261 Identities=25% Similarity=0.310 Sum_probs=206.5
Q ss_pred cCCCccceeccCCcEEEEEEEe-----CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeee--cCC
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-----PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS--HPR 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~ 474 (673)
++|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++. ...
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 99 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ 99 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC---HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC---HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc
Confidence 5788999999999999999983 468899999987542 334677999999999999999999999986 456
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLA 174 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHHG--GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred eEEEEEeecCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccc
Confidence 6899999999999999998643 3589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCC---ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccc------cccccccc
Q 005864 555 KFLKPGSSN---WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS------SNMNLSLN 625 (673)
Q Consensus 555 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~------~~~~~~~~ 625 (673)
......... .....+++.|+|||.+.+..++.++||||||+++|||++|+.||.......... ........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (327)
T 3lxl_A 175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLL 254 (327)
T ss_dssp EECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHH
T ss_pred eecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHH
Confidence 987544322 223457888999999999899999999999999999999999986432210000 00000011
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+.+......+ .....+..+.+++.+||+.||++|||++|+++.|+
T Consensus 255 ~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~ 299 (327)
T 3lxl_A 255 ELLEEGQRLP--APPACPAEVHELMKLCWAPSPQDRPSFSALGPQLD 299 (327)
T ss_dssp HHHHTTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhhcccCCC--CCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111111111 11223446899999999999999999999999886
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-41 Score=357.73 Aligned_cols=255 Identities=22% Similarity=0.294 Sum_probs=195.3
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhh-----hhHHHHHHHHHHHHHhccCCCcccceeeeeecC
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLS-----EISVQREFLNEIKALTEIRHRNIVKFYGFCSHP 473 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 473 (673)
..++|.+.+.||+|+||+||+|... +++.||||++...... .......+.+|+.++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 4578999999999999999999764 6899999998764322 11223458899999999999999999999854
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC---ceEEec
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY---EARVSD 550 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~D 550 (673)
+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred CceEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEee
Confidence 4578999999999999998765 3589999999999999999999999 999999999999997544 599999
Q ss_pred ccceeecCCCCCCceeccccccccccccccc---CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccc
Q 005864 551 FGIAKFLKPGSSNWTEFAGTFGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEI 627 (673)
Q Consensus 551 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 627 (673)
||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ......+
T Consensus 286 FG~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~-------~~~~~~i 357 (419)
T 3i6u_A 286 FGHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-------VSLKDQI 357 (419)
T ss_dssp SSTTTSCC------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS-------CCHHHHH
T ss_pred cccceecCCC-ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch-------HHHHHHH
Confidence 9999876432 23345679999999999853 56788999999999999999999999742211 1111122
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...........+...+..+.+++.+||+.||++|||++|+++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 358 TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 222333222222334567999999999999999999999986
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-41 Score=348.14 Aligned_cols=260 Identities=22% Similarity=0.244 Sum_probs=202.7
Q ss_pred HHHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-----CCcccceeeeee
Q 005864 398 IRATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-----HRNIVKFYGFCS 471 (673)
Q Consensus 398 ~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~l~~~~~ 471 (673)
....++|++.+.||+|+||+||+|+. .+++.||||++... ....+.+..|+.++..++ ||||+++++++.
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~ 106 (360)
T 3llt_A 31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFM 106 (360)
T ss_dssp CEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEE
T ss_pred eEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCCCCCeecccceee
Confidence 33457899999999999999999977 46899999998643 223566778999999986 999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC---------
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS--------- 542 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--------- 542 (673)
..+..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.
T Consensus 107 ~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~ 181 (360)
T 3llt_A 107 YYDHMCLIFEPL-GPSLYEIITRNNY-NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLIT 181 (360)
T ss_dssp ETTEEEEEECCC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEE
T ss_pred ECCeeEEEEcCC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccc
Confidence 999999999999 8899999987542 3588999999999999999999999 9999999999999975
Q ss_pred ----------------CCceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCC
Q 005864 543 ----------------EYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606 (673)
Q Consensus 543 ----------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p 606 (673)
++.+||+|||++...... .....||+.|+|||++.+..++.++||||+||++|||++|+.|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p 258 (360)
T 3llt_A 182 VRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY---HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLL 258 (360)
T ss_dssp EECTTTCCEEEEEEESCCCEEECCCTTCEETTSC---CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred hhcccccccccccccCCCCEEEEeccCceecCCC---CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCC
Confidence 788999999999875432 2346789999999999999999999999999999999999999
Q ss_pred Cccccccccccc-------ccc--------ccccccc-----CCCCCCCCcchH--------------HHHHHHHHHHHH
Q 005864 607 RDFISLLSSSSS-------NMN--------LSLNEIL-----DPRLPLPSRNIQ--------------DKLISILEVALL 652 (673)
Q Consensus 607 ~~~~~~~~~~~~-------~~~--------~~~~~~~-----~~~~~~~~~~~~--------------~~~~~l~~li~~ 652 (673)
|......+.... ... ....... ....+....... .....+.+++.+
T Consensus 259 f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 338 (360)
T 3llt_A 259 FRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYS 338 (360)
T ss_dssp CCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHH
Confidence 964322110000 000 0000000 000010000000 011457899999
Q ss_pred cccCCCCCCCCHHHHHH
Q 005864 653 CLEESPESRPTMQTVCQ 669 (673)
Q Consensus 653 cl~~dp~~Rps~~~v~~ 669 (673)
||+.||++|||++|+++
T Consensus 339 ~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 339 ILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HCCSSGGGSCCHHHHTT
T ss_pred HhcCChhhCCCHHHHhc
Confidence 99999999999999975
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-41 Score=363.53 Aligned_cols=252 Identities=23% Similarity=0.335 Sum_probs=207.0
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||+||+|... +|+.||||++....... .....+.+|++++++++||||+++++++.+.+..++|
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccc-hHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 457999999999999999999775 79999999987543222 2357789999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeC---CCCceEEecccceee
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS---SEYEARVSDFGIAKF 556 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~~~~ 556 (673)
|||+++|+|.+.+...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||++..
T Consensus 100 ~e~~~~~~L~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp ECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 99999999999987653 488999999999999999999999 999999999999995 456799999999986
Q ss_pred cCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCC
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
.... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... .....+.......+.
T Consensus 174 ~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~~~~ 243 (486)
T 3mwu_A 174 FQQN-TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--------DILKRVETGKYAFDL 243 (486)
T ss_dssp BCCC-----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCSCS
T ss_pred CCCC-CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCC
Confidence 6443 23345679999999999875 5899999999999999999999999743221 112222333333333
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+...+.++.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 244 PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 344455667899999999999999999999986
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-41 Score=337.47 Aligned_cols=251 Identities=22% Similarity=0.416 Sum_probs=204.2
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.++|++.+.||+|+||+||+|...+++.||+|.+..... ..+.+.+|++++++++||||+++++++.. +..++||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~ 86 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc----cHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEE
Confidence 467889999999999999999988888999999865422 25678899999999999999999999864 5689999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+||+|||++......
T Consensus 87 e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 87 EYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp ECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred ecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 9999999999997542 12588999999999999999999999 9999999999999999999999999999877543
Q ss_pred CCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCCCCCc
Q 005864 561 SSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPSR 637 (673)
Q Consensus 561 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 637 (673)
... .....++..|+|||.+.+..++.++||||||+++|||++ |+.||......+. ...+... ....+.
T Consensus 163 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--------~~~~~~~~~~~~~~- 233 (279)
T 1qpc_A 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV--------IQNLERGYRMVRPD- 233 (279)
T ss_dssp CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--------HHHHHTTCCCCCCT-
T ss_pred ccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHH--------HHHHhcccCCCCcc-
Confidence 221 123446778999999988889999999999999999999 9999874322111 1111111 111111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+.++.+++.+||+.||++|||++++++.|+
T Consensus 234 ---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 265 (279)
T 1qpc_A 234 ---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (279)
T ss_dssp ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred ---cccHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 22346889999999999999999999999886
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-41 Score=341.98 Aligned_cols=250 Identities=26% Similarity=0.354 Sum_probs=203.1
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|.+.+.||+|+||+||+|+.. +|+.||+|.+..... ...+.+.+|+.++.+++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA---FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc---cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 457899999999999999999775 799999999875422 2245688999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe---CCCCceEEecccceee
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL---SSEYEARVSDFGIAKF 556 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~ 556 (673)
|||+++++|.+++...+ .+++..+..++.|++.||+|||+. +++||||||+||++ +.++.+||+|||++..
T Consensus 85 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~ 158 (304)
T 2jam_A 85 MQLVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158 (304)
T ss_dssp ECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred EEcCCCccHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence 99999999999997653 478899999999999999999999 99999999999999 7788999999999975
Q ss_pred cCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCC
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
.... ......|++.|+|||.+.+..++.++||||+|+++|||++|+.||...... .....+.......+.
T Consensus 159 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--------~~~~~i~~~~~~~~~ 228 (304)
T 2jam_A 159 EQNG--IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--------KLFEKIKEGYYEFES 228 (304)
T ss_dssp CCCB--TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--------HHHHHHHHCCCCCCT
T ss_pred cCCC--ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--------HHHHHHHcCCCCCCc
Confidence 4322 234456899999999999999999999999999999999999998643211 111111122222222
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+.++.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 229 PFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 222234456899999999999999999999985
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-41 Score=346.40 Aligned_cols=266 Identities=19% Similarity=0.258 Sum_probs=209.5
Q ss_pred CcccHHHHHHHhcCCCcc-ceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccce
Q 005864 390 GKIVYEEIIRATKNFDAE-QCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKF 466 (673)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~-~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l 466 (673)
+.+.++......+.|.+. +.||+|+||+||+|... +|+.||+|++...... ......+.+|+.++..++ ||||+++
T Consensus 16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~iv~~ 94 (327)
T 3lm5_A 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG-QDCRAEILHEIAVLELAKSCPRVINL 94 (327)
T ss_dssp CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETT-EECHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc-hHHHHHHHHHHHHHHhccCCCCEEEE
Confidence 344455555666778877 88999999999999775 6999999998765333 234677889999999994 6999999
Q ss_pred eeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC---C
Q 005864 467 YGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS---E 543 (673)
Q Consensus 467 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~ 543 (673)
++++..++..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. +
T Consensus 95 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~ 170 (327)
T 3lm5_A 95 HEVYENTSEIILILEYAAGGEIFSLCLPEL-AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPL 170 (327)
T ss_dssp EEEEECSSEEEEEEECCTTEEGGGGGSSCC--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTB
T ss_pred EEEEEeCCeEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCC
Confidence 999999999999999999999999986542 24589999999999999999999999 9999999999999998 7
Q ss_pred CceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccc
Q 005864 544 YEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLS 623 (673)
Q Consensus 544 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~ 623 (673)
+.+||+|||++....... ......||+.|+|||++.+..++.++||||+|+++|||++|+.||......+.
T Consensus 171 ~~~kL~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-------- 241 (327)
T 3lm5_A 171 GDIKIVDFGMSRKIGHAC-ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET-------- 241 (327)
T ss_dssp CCEEECCGGGCEEC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--------
T ss_pred CcEEEeeCccccccCCcc-ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH--------
Confidence 899999999998765432 23446789999999999999999999999999999999999999974322111
Q ss_pred cccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 LNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+.......+.......+..+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 242 YLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 1111111111122222234456889999999999999999999975
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-41 Score=338.62 Aligned_cols=253 Identities=25% Similarity=0.382 Sum_probs=199.2
Q ss_pred cCCCccceeccCCcEEEEEEEeCC----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeee-cCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS-HPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~ 476 (673)
..|++.+.||+|+||+||+|.+.+ +..||+|.+... ......+.+.+|+.++++++||||+++++++. .++..
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 102 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC--CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence 468888999999999999997642 235899988753 33345678999999999999999999999864 45678
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 103 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~ 177 (298)
T 3f66_A 103 LVVLPYMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARD 177 (298)
T ss_dssp EEEEECCTTCBHHHHHHCTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCC
T ss_pred EEEEeCCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccc
Confidence 99999999999999997643 4578899999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC----CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCC
Q 005864 557 LKPGSS----NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPR 631 (673)
Q Consensus 557 ~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
...... ......+|+.|+|||.+.+..++.++||||+|+++|||++ |..||......+ .........
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~--------~~~~~~~~~ 249 (298)
T 3f66_A 178 MYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--------ITVYLLQGR 249 (298)
T ss_dssp CSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT--------HHHHHHTTC
T ss_pred ccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH--------HHHHHhcCC
Confidence 643221 1233557789999999999999999999999999999999 555554322111 111111111
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...... ..+..+.+++.+||+.||++|||++|+++.|+
T Consensus 250 ~~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 287 (298)
T 3f66_A 250 RLLQPE---YCPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 287 (298)
T ss_dssp CCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCc---cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111 12345889999999999999999999999986
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=344.35 Aligned_cols=258 Identities=24% Similarity=0.356 Sum_probs=203.5
Q ss_pred HHHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhc--cCCCcccceeeeeecCC-
Q 005864 398 IRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTE--IRHRNIVKFYGFCSHPR- 474 (673)
Q Consensus 398 ~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~- 474 (673)
....++|.+.+.||+|+||+||+|.. +|+.||||++... ..+.+.+|++++.. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~ 110 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNG 110 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence 44457899999999999999999988 5999999998643 23567788888887 78999999999998765
Q ss_pred ---eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHh--------hcCCCCeEEecCCCCCeEeCCC
Q 005864 475 ---HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH--------HDCFPPIVHRDISSKNVLLSSE 543 (673)
Q Consensus 475 ---~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivH~dlk~~Nill~~~ 543 (673)
..++||||+++|+|.+++... .+++..++.++.|++.||+||| +. +|+||||||+||+++.+
T Consensus 111 ~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~ 183 (342)
T 1b6c_B 111 TWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKN 183 (342)
T ss_dssp SCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTT
T ss_pred ccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCC
Confidence 789999999999999999764 4889999999999999999999 77 99999999999999999
Q ss_pred CceEEecccceeecCCCCCC----ceecccccccccccccccC------CcCcchhHHHHHHHHHHHHhC----------
Q 005864 544 YEARVSDFGIAKFLKPGSSN----WTEFAGTFGYVAPELAYTM------KVTEKCDVYSFGVLALEVIKG---------- 603 (673)
Q Consensus 544 ~~~kl~Dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~el~~g---------- 603 (673)
+.+||+|||++......... .....||+.|+|||.+.+. .++.++||||||+++|||++|
T Consensus 184 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~ 263 (342)
T 1b6c_B 184 GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 263 (342)
T ss_dssp SCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred CCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCccccc
Confidence 99999999999877544322 2345789999999998765 344789999999999999999
Q ss_pred CCCCcccccccccccccccccccccCCCCC--CCCc-chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 604 KHPRDFISLLSSSSSNMNLSLNEILDPRLP--LPSR-NIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 604 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+.||......... .......+...... .+.. .....+..+.+++.+||+.||++|||+.||++.|+
T Consensus 264 ~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~ 332 (342)
T 1b6c_B 264 QLPYYDLVPSDPS---VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS 332 (342)
T ss_dssp CCTTTTTSCSSCC---HHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred ccCccccCcCccc---HHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 6776532211100 00111111111111 1111 12355667999999999999999999999999986
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-41 Score=345.58 Aligned_cols=261 Identities=26% Similarity=0.345 Sum_probs=195.6
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHH--HHHHHHhccCCCcccceeeeee-----cC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFL--NEIKALTEIRHRNIVKFYGFCS-----HP 473 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~--~e~~~l~~l~h~niv~l~~~~~-----~~ 473 (673)
.++|++.+.||+|+||+||+|+. +++.||||++.... ...+. .|+..+..++||||+++++++. ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 84 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN------RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGR 84 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSC
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc------hhhHHHHHHHHHHHhccCcchhhheecccccccCCC
Confidence 36788999999999999999977 78999999986432 22333 3444455689999999998653 23
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcC------CCCeEEecCCCCCeEeCCCCceE
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDC------FPPIVHRDISSKNVLLSSEYEAR 547 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------~~~ivH~dlk~~Nill~~~~~~k 547 (673)
...++||||+++|+|.+++.... .++..+..++.|+++||+|||+.. .++|+||||||+||+++.++.+|
T Consensus 85 ~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 85 MEYLLVMEYYPNGSLXKYLSLHT----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEEEECCCTTCBHHHHHHHCC----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred ceEEEEEecCCCCcHHHHHhhcc----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 35689999999999999997653 588899999999999999999873 23899999999999999999999
Q ss_pred EecccceeecCCCC--------CCceeccccccccccccccc-------CCcCcchhHHHHHHHHHHHHhCCCCCccccc
Q 005864 548 VSDFGIAKFLKPGS--------SNWTEFAGTFGYVAPELAYT-------MKVTEKCDVYSFGVLALEVIKGKHPRDFISL 612 (673)
Q Consensus 548 l~Dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~-------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~ 612 (673)
|+|||++..+.... .......||+.|+|||++.+ ..++.++|||||||++|||++|..||.....
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~ 240 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence 99999998765322 11224568999999999876 4567899999999999999999887642221
Q ss_pred cccccccc---------cc-----ccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 613 LSSSSSNM---------NL-----SLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 613 ~~~~~~~~---------~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
........ .. .......+.++.........+.++.+++.+||+.||++|||++|+++.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~ 314 (336)
T 3g2f_A 241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA 314 (336)
T ss_dssp CCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred hhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHH
Confidence 11100000 00 00111122222222233346667999999999999999999999999886
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-41 Score=343.99 Aligned_cols=250 Identities=24% Similarity=0.412 Sum_probs=196.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCE----EEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEV----VAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
++|++.+.||+|+||+||+|.+. +++. ||+|.+.... .....+.+.+|+.++.+++||||+++++++..+. .
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS--SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence 57899999999999999999764 4554 5777765432 2234678899999999999999999999998765 7
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++|+||+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 92 ~~v~~~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEECCCSSCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred eEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 89999999999999998754 4588999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC--C
Q 005864 557 LKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP--R 631 (673)
Q Consensus 557 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~ 631 (673)
....... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||+.....+. ...+.. .
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~---------~~~~~~~~~ 237 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI---------SSILEKGER 237 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH---------HHHHHTTCC
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH---------HHHHHcCCC
Confidence 6443322 233456788999999999999999999999999999999 9999974322111 111111 1
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+.+.. .+.++.+++.+||+.||.+|||++|+++.|+
T Consensus 238 ~~~~~~----~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 274 (327)
T 3lzb_A 238 LPQPPI----CTIDVYMIMRKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CCCCTT----BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCcc----CCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 222222 2345889999999999999999999999886
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=336.82 Aligned_cols=251 Identities=24% Similarity=0.371 Sum_probs=199.4
Q ss_pred CCCccceeccCCcEEEEEEEeC-C---CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee-e
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-S---GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS-F 477 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~ 477 (673)
.|...+.||+|+||+||+|.+. + +..||+|.+... ......+.+.+|+.++++++||||+++++++.+.+.. +
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 99 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI--TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH 99 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc--ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcE
Confidence 4556689999999999999753 2 337999998753 3334567899999999999999999999999876655 9
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+|+||+.+|+|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++..
T Consensus 100 ~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 174 (298)
T 3pls_A 100 VLLPYMCHGDLLQFIRSPQ--RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDI 174 (298)
T ss_dssp EEECCCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred EEEecccCCCHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence 9999999999999998743 4578999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCC----CCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCC-cccccccccccccccccccccCC-C
Q 005864 558 KPGS----SNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPR-DFISLLSSSSSNMNLSLNEILDP-R 631 (673)
Q Consensus 558 ~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~-~ 631 (673)
.... .......+++.|+|||.+.+..++.++||||||+++|||++|..|+ ......+ ....+... .
T Consensus 175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~--------~~~~~~~~~~ 246 (298)
T 3pls_A 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD--------LTHFLAQGRR 246 (298)
T ss_dssp TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG--------HHHHHHTTCC
T ss_pred cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH--------HHHHhhcCCC
Confidence 4321 2223456788999999999999999999999999999999966654 3221110 00111111 1
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+.+. ..+..+.+++.+||+.||.+|||++++++.|+
T Consensus 247 ~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~ 283 (298)
T 3pls_A 247 LPQPE----YCPDSLYQVMQQCWEADPAVRPTFRVLVGEVE 283 (298)
T ss_dssp CCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCc----cchHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11111 12345889999999999999999999999986
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=333.51 Aligned_cols=252 Identities=25% Similarity=0.342 Sum_probs=204.8
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||.||+|... +|+.||||++..... ....+.+.+|+.+++.++||||+++++++.+++..++|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC--TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc--hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 467899999999999999999775 799999999865432 23467889999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
+||+++++|.+++... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||.+.....
T Consensus 84 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 157 (276)
T 2yex_A 84 LEYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRY 157 (276)
T ss_dssp EECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred EEecCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCC
Confidence 9999999999998754 3588999999999999999999999 999999999999999999999999999986643
Q ss_pred CC--CCceecccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCC
Q 005864 560 GS--SNWTEFAGTFGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636 (673)
Q Consensus 560 ~~--~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
.. .......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||+....... ............+
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-------~~~~~~~~~~~~~- 229 (276)
T 2yex_A 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ-------EYSDWKEKKTYLN- 229 (276)
T ss_dssp TTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSH-------HHHHHHTTCTTST-
T ss_pred CcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHH-------HHHHhhhcccccC-
Confidence 22 22344678999999999987765 7799999999999999999999974322110 0011111111111
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+..+.+++.+||+.||++|||++|+++
T Consensus 230 -~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 230 -PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp -TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 11233456889999999999999999999975
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=356.36 Aligned_cols=258 Identities=20% Similarity=0.294 Sum_probs=197.0
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC------
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP------ 473 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 473 (673)
.++|++.+.||+|+||+||+|... +|+.||||++.... ......+.+.+|+.+++.++||||+++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG-GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc-cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 367999999999999999999764 68999999997653 2334567888999999999999999999999654
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccc
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGI 553 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 553 (673)
...++||||+++ ++.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred CeEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 356999999987 57666643 378899999999999999999999 999999999999999999999999999
Q ss_pred eeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------------
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM------------- 620 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~------------- 620 (673)
++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......+......
T Consensus 211 a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~ 289 (464)
T 3ttj_A 211 ARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289 (464)
T ss_dssp C-----C-CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred eeecCCC-cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 9876432 23455789999999999999999999999999999999999999997543221100000
Q ss_pred -ccccccccCCC----------------CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 -NLSLNEILDPR----------------LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 -~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.......+... .+...........++.+++.+||+.||++|||++|+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000011111 11111122223567999999999999999999999985
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-41 Score=362.94 Aligned_cols=252 Identities=25% Similarity=0.388 Sum_probs=202.9
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.+.|++.+.||+|+||+||+|+.. +++.||+|++....... .....+.+|+.+++.++||||+++++++.+++..++|
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST-SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc-hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 346899999999999999999875 68999999987653222 2356788999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC---CceEEecccceee
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE---YEARVSDFGIAKF 556 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~~~ 556 (673)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.. +.+||+|||++..
T Consensus 115 ~e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 115 MECYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 9999999999998765 3488899999999999999999999 99999999999999764 4599999999987
Q ss_pred cCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCC
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
..... ......||+.|+|||++. ..++.++||||+||++|+|++|+.||...... .....+.......+.
T Consensus 189 ~~~~~-~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--------~~~~~i~~~~~~~~~ 258 (494)
T 3lij_A 189 FENQK-KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--------EILRKVEKGKYTFDS 258 (494)
T ss_dssp CBTTB-CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHTCCCCCS
T ss_pred CCCCc-cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCc
Confidence 75432 334567999999999876 56999999999999999999999999743221 122222233333333
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+...+..+.+++.+||+.||.+|||+.|+++
T Consensus 259 ~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 259 PEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp GGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 334445567899999999999999999999875
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-41 Score=363.60 Aligned_cols=253 Identities=25% Similarity=0.353 Sum_probs=205.2
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhh----------hHHHHHHHHHHHHHhccCCCcccceeee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSE----------ISVQREFLNEIKALTEIRHRNIVKFYGF 469 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~----------~~~~~~~~~e~~~l~~l~h~niv~l~~~ 469 (673)
.++|.+.+.||+|+||+||+|... +++.||+|++....... ....+.+.+|+.++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467999999999999999999775 68899999987643221 1235678999999999999999999999
Q ss_pred eecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC---ce
Q 005864 470 CSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY---EA 546 (673)
Q Consensus 470 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~ 546 (673)
+.+++..++||||+++|+|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH---KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccE
Confidence 999999999999999999999997653 489999999999999999999999 999999999999998775 69
Q ss_pred EEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccc
Q 005864 547 RVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNE 626 (673)
Q Consensus 547 kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 626 (673)
||+|||++....... ......||+.|+|||.+. ..++.++||||+||++|+|++|+.||..... ......
T Consensus 189 kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--------~~~~~~ 258 (504)
T 3q5i_A 189 KIVDFGLSSFFSKDY-KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND--------QDIIKK 258 (504)
T ss_dssp EECCCTTCEECCTTS-CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHH
T ss_pred EEEECCCCEEcCCCC-ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHH
Confidence 999999998775432 334567999999999876 4689999999999999999999999974322 112222
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 627 ILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.......+...+...+.++.+++.+||+.||.+|||++|+++
T Consensus 259 i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 259 VEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 2233333332233344567999999999999999999999975
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=340.68 Aligned_cols=255 Identities=22% Similarity=0.349 Sum_probs=204.4
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeee--cCCeee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS--HPRHSF 477 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~ 477 (673)
.++|++.+.||+|+||+||+|... +|+.||+|.+...... ....+.+.+|+.++++++||||+++++++. .....+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC-HHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 357889999999999999999775 6999999998754322 334678999999999999999999999884 466889
Q ss_pred EEEecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCC-----eEEecCCCCCeEeCCCCceEEecc
Q 005864 478 LVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPP-----IVHRDISSKNVLLSSEYEARVSDF 551 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivH~dlk~~Nill~~~~~~kl~Df 551 (673)
+||||+++|+|.+++.... ....+++..++.++.|++.||+|||+. + ++||||||+||+++.++.+||+||
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~df 160 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDF 160 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCC
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence 9999999999999997642 223489999999999999999999999 7 999999999999999999999999
Q ss_pred cceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
|++..............|++.|+|||.+.+..++.++||||||+++|||++|+.||......+. ...+....
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--------~~~i~~~~ 232 (279)
T 2w5a_A 161 GLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL--------AGKIREGK 232 (279)
T ss_dssp CHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--------HHHHHHTC
T ss_pred chheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHH--------HHHHhhcc
Confidence 9998765433333445789999999999998999999999999999999999999874322111 11111111
Q ss_pred C-CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHh
Q 005864 632 L-PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671 (673)
Q Consensus 632 ~-~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L 671 (673)
. ..+. ..+.++.+++.+||+.||++|||++|+++.+
T Consensus 233 ~~~~~~----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 233 FRRIPY----RYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp CCCCCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred cccCCc----ccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 1 1111 2234588999999999999999999999865
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-41 Score=335.43 Aligned_cols=252 Identities=21% Similarity=0.359 Sum_probs=200.4
Q ss_pred hcCCCccceeccCCcEEEEEEEeCC----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPS----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
.++|.+.+.||+|+||+||+|.+.. +..||+|.+.... .....+.+.+|+.++++++||||+++++++.+ +..
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~ 87 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPT 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSC
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCC
Confidence 4678899999999999999997532 3469999987642 23346789999999999999999999999865 456
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||+++++|.+++...+ ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 88 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 88 WIIMELYPYGELGHYLERNK--NSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEEECCTTCBHHHHHHHHT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEEecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 89999999999999997653 3588999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCC-CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccC-CCCC
Q 005864 557 LKPGSS-NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILD-PRLP 633 (673)
Q Consensus 557 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 633 (673)
...... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+. ...+.. ...+
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~--------~~~~~~~~~~~ 234 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV--------IGVLEKGDRLP 234 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH--------HHHHHHTCCCC
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH--------HHHHhcCCCCC
Confidence 644322 2233456789999999998899999999999999999998 9999863322111 000000 1112
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+.. .+..+.+++.+||+.||++|||+.|+++.|+
T Consensus 235 ~~~~----~~~~l~~li~~~l~~~p~~Rps~~ell~~L~ 269 (281)
T 3cc6_A 235 KPDL----CPPVLYTLMTRCWDYDPSDRPRFTELVCSLS 269 (281)
T ss_dssp CCTT----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC----CCHHHHHHHHHHccCCchhCcCHHHHHHHHH
Confidence 2211 2345889999999999999999999999886
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-41 Score=344.26 Aligned_cols=264 Identities=23% Similarity=0.353 Sum_probs=209.8
Q ss_pred HHHHHHHhcCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccce
Q 005864 394 YEEIIRATKNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKF 466 (673)
Q Consensus 394 ~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l 466 (673)
..++....++|++.+.||+|+||+||+|.+ .+++.||||+++... .....+.+.+|+.++.++ +||||+++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 334444567899999999999999999974 357899999987643 233467899999999999 79999999
Q ss_pred eeeeecCC-eeeEEEecccCCChHHHHhcCCC-------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEec
Q 005864 467 YGFCSHPR-HSFLVYECLERGSLAEILSNDGS-------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRD 532 (673)
Q Consensus 467 ~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~d 532 (673)
++++..++ ..++||||+++|+|.+++..... ...+++..+..++.|+++||+|||+. +|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 99987654 58999999999999999987542 12288999999999999999999999 999999
Q ss_pred CCCCCeEeCCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcc
Q 005864 533 ISSKNVLLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDF 609 (673)
Q Consensus 533 lk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~ 609 (673)
|||+||+++.++.+||+|||++......... .....+|+.|+|||.+.+..++.++||||||+++|||++ |..||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 9999999999999999999999876543322 223457889999999999999999999999999999998 9999874
Q ss_pred cccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 610 ISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
........ ...... .....+. ..+..+.+++.+||+.||.+|||+.|+++.|+
T Consensus 254 ~~~~~~~~----~~~~~~--~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 306 (316)
T 2xir_A 254 VKIDEEFC----RRLKEG--TRMRAPD----YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 306 (316)
T ss_dssp CCCSHHHH----HHHHHT--CCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cchhHHHH----HHhccC--ccCCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 32211100 000000 0111111 12345889999999999999999999999886
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-41 Score=339.26 Aligned_cols=252 Identities=27% Similarity=0.363 Sum_probs=196.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|.+.+.||+|+||+||+|... +|+.||+|++..... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS--QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc--chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 56889999999999999999764 689999999876532 223578899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe---CCCCceEEecccceee
Q 005864 481 ECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL---SSEYEARVSDFGIAKF 556 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~~ 556 (673)
||+++|+|.+++.... ....+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++..
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~ 176 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence 9999999999986431 124588999999999999999999999 99999999999999 4567899999999986
Q ss_pred cCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCC
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
.... .......|++.|+|||.+. ..++.++||||+|+++|||++|+.||......+.... ............
T Consensus 177 ~~~~-~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~------~~~~~~~~~~~~ 248 (285)
T 3is5_A 177 FKSD-EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQK------ATYKEPNYAVEC 248 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH------HHHCCCCCCC--
T ss_pred cCCc-ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhh------hccCCccccccc
Confidence 6433 2234567899999999875 5689999999999999999999999974322111000 000011111110
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+.++.+++.+||+.||++|||++|+++
T Consensus 249 ---~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 249 ---RPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ---CcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 012345889999999999999999999985
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-41 Score=348.84 Aligned_cols=264 Identities=23% Similarity=0.273 Sum_probs=199.2
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhh--hHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSE--ISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
..++|++.+.||+|+||.||+|... +|+.||||++....... ....+.+.+|++++++++||||+++++++.+.+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4578999999999999999999875 59999999987543222 11234688999999999999999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||+++ +|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 161 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNS--LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKS 161 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCC--SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGST
T ss_pred EEEEEcCCC-CHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEeccccee
Confidence 999999987 8999887653 4578889999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccccccc-
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLSLNEI- 627 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~~~~~- 627 (673)
............+|+.|+|||.+.+. .++.++||||+||++|||++|..||......+..... ....+...
T Consensus 162 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 241 (346)
T 1ua2_A 162 FGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC 241 (346)
T ss_dssp TTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTT
T ss_pred ccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhc
Confidence 75544445567789999999998754 4889999999999999999999998754322110000 00000000
Q ss_pred -----c-CCCCCCCC--cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 628 -----L-DPRLPLPS--RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 628 -----~-~~~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
. ....+... ......+.++.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 242 SLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp SSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 00000000 001122356899999999999999999999986
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=337.80 Aligned_cols=252 Identities=24% Similarity=0.330 Sum_probs=199.1
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
+|.....||+|+||+||+|.. .+++.||||.+.... ....+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 99 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFME 99 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC---C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc---hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEE
Confidence 345556899999999999976 468899999986542 2345778999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-CCceEEecccceeecCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-EYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~~~~~~~~ 560 (673)
|+++++|.+++........+++..+..++.|++.||+|||+. +++||||||+||+++. ++.+||+|||++......
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~ 176 (295)
T 2clq_A 100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI 176 (295)
T ss_dssp CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-
T ss_pred eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCC
Confidence 999999999998765445577889999999999999999999 9999999999999987 899999999999877544
Q ss_pred CCCceecccccccccccccccCC--cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
........|++.|+|||.+.+.. ++.++||||||+++|||++|+.||......... ... ..........+.
T Consensus 177 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~--~~~~~~~~~~~~-- 249 (295)
T 2clq_A 177 NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA---MFK--VGMFKVHPEIPE-- 249 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH---HHH--HHHHCCCCCCCT--
T ss_pred CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH---HHh--hccccccccccc--
Confidence 33344567899999999987644 789999999999999999999998643211100 000 000011111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.++.+++.+||+.||++|||+.|+++
T Consensus 250 --~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 250 --SMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp --TSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred --cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22345889999999999999999999985
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=345.95 Aligned_cols=247 Identities=17% Similarity=0.127 Sum_probs=199.4
Q ss_pred hcCCCccceeccCCcEEEEEEE------eCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC---CCcccceeeeee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGE------LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR---HRNIVKFYGFCS 471 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~ 471 (673)
.++|.+.+.||+|+||+||+|. ..+++.||||++.... ..++..|++++..++ |+||+++++++.
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~------~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN------PWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC------HHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC------hhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 3678899999999999999993 4568999999986542 345677888888886 999999999999
Q ss_pred cCCeeeEEEecccCCChHHHHhcCC--CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-------
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDG--SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS------- 542 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~------- 542 (673)
.++..++||||+++|+|.+++...+ ....+++..+..++.||++||+|||+. +|+||||||+||+++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC--
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccc
Confidence 9999999999999999999997532 235689999999999999999999999 9999999999999998
Q ss_pred ----CCceEEecccceeecCCC--CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccc
Q 005864 543 ----EYEARVSDFGIAKFLKPG--SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS 616 (673)
Q Consensus 543 ----~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~ 616 (673)
++.+||+|||+++.+... ........||++|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--- 291 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG--- 291 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT---
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC---
Confidence 899999999999876422 22334567999999999999999999999999999999999999998632110
Q ss_pred ccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCC-CCHHHHHHHhh
Q 005864 617 SSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESR-PTMQTVCQLLC 672 (673)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R-ps~~~v~~~L~ 672 (673)
... ....+.... ....+.+++..|++.+|.+| |+++++.+.|+
T Consensus 292 ----~~~----~~~~~~~~~-----~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~ 335 (365)
T 3e7e_A 292 ----ECK----PEGLFRRLP-----HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLK 335 (365)
T ss_dssp ----EEE----ECSCCTTCS-----SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHH
T ss_pred ----cee----echhccccC-----cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHH
Confidence 001 111111111 13347789999999999998 67888777664
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=335.05 Aligned_cols=252 Identities=26% Similarity=0.388 Sum_probs=201.7
Q ss_pred hcCCCccc-eeccCCcEEEEEEEe---CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 401 TKNFDAEQ-CIGIGGQASVYRGEL---PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 401 ~~~~~~~~-~ig~G~~g~vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
..+|.+.+ .||+|+||+||+|.+ .+++.||||+++... ......+.+.+|+.++..++||||+++++++ ..+..
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 35677777 999999999999954 347889999987643 2334467899999999999999999999999 56678
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||+++++|.+++...+ .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++..
T Consensus 93 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQNR---HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEEEECCTTEEHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEeCCCCCHHHHHHhCc---CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 99999999999999998753 488899999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCCc---eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-C
Q 005864 557 LKPGSSNW---TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-R 631 (673)
Q Consensus 557 ~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~ 631 (673)
........ ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+. ...+... .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~--------~~~~~~~~~ 238 (291)
T 1xbb_A 167 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV--------TAMLEKGER 238 (291)
T ss_dssp CCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--------HHHHHTTCC
T ss_pred eccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH--------HHHHHcCCC
Confidence 75443321 22345688999999998889999999999999999999 9999874322111 0111111 1
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+. ..+..+.+++.+||+.||++|||+.|+++.|+
T Consensus 239 ~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 275 (291)
T 1xbb_A 239 MGCPA----GCPREMYDLMNLCWTYDVENRPGFAAVELRLR 275 (291)
T ss_dssp CCCCT----TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCCC----CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111 23346899999999999999999999999986
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=340.59 Aligned_cols=258 Identities=23% Similarity=0.340 Sum_probs=196.6
Q ss_pred HHhcCCCccceeccCCcEEEEEEEeC----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGELP----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
...++|.+.+.||+|+||+||+|... +++.||+|.++.... .....+.+.+|+.++.+++||||+++++++.+.+
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 109 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS-SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMS 109 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC-CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC--
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc-chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecc
Confidence 34577889999999999999999653 345899999875432 2334678999999999999999999999997755
Q ss_pred -----eeeEEEecccCCChHHHHhcCC---CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCce
Q 005864 475 -----HSFLVYECLERGSLAEILSNDG---SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEA 546 (673)
Q Consensus 475 -----~~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 546 (673)
..++||||+++|+|.+++.... ....+++..++.++.|+++||.|||+. +|+||||||+||+++.++.+
T Consensus 110 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~ 186 (313)
T 3brb_A 110 SQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTV 186 (313)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCE
T ss_pred ccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcE
Confidence 3499999999999999985431 235689999999999999999999999 99999999999999999999
Q ss_pred EEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccc
Q 005864 547 RVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLS 623 (673)
Q Consensus 547 kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~ 623 (673)
||+|||++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |..||......+ .
T Consensus 187 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--------~ 258 (313)
T 3brb_A 187 CVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE--------M 258 (313)
T ss_dssp EECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--------H
T ss_pred EEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH--------H
Confidence 9999999987644321 2233457889999999999999999999999999999999 889987432211 1
Q ss_pred cccccCCC-CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 624 LNEILDPR-LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 624 ~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+.... ...+ ...+..+.+++.+||+.||++|||+.++++.|+
T Consensus 259 ~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 304 (313)
T 3brb_A 259 YDYLLHGHRLKQP----EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLE 304 (313)
T ss_dssp HHHHHTTCCCCCB----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHcCCCCCCC----ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 11111111 1111 123346899999999999999999999999986
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=337.34 Aligned_cols=248 Identities=25% Similarity=0.402 Sum_probs=206.4
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+.|+..+.||+|+||.||+|.. .+|+.||+|++..... ....+.+.+|+.++..++||||+++++++.+++..++||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC--STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 5688999999999999999976 4699999999875432 234678999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.+++... .+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 100 e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 172 (303)
T 3a7i_A 100 EYLGGGSALDLLEPG----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT 172 (303)
T ss_dssp ECCTTEEHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTT
T ss_pred EeCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcc
Confidence 999999999999753 488999999999999999999999 9999999999999999999999999999887654
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........|++.|+|||.+.+..++.++||||||+++|||++|+.||.......... .......+.+ +.
T Consensus 173 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-----~~~~~~~~~~--~~---- 241 (303)
T 3a7i_A 173 QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF-----LIPKNNPPTL--EG---- 241 (303)
T ss_dssp BCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-----HHHHSCCCCC--CS----
T ss_pred ccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHH-----HhhcCCCCCC--cc----
Confidence 444455678999999999999999999999999999999999999987432211100 0000001111 11
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+..+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 270 (303)
T 3a7i_A 242 NYSKPLKEFVEACLNKEPSFRPTAKELLK 270 (303)
T ss_dssp SCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred ccCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 12345889999999999999999999975
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-41 Score=342.51 Aligned_cols=264 Identities=23% Similarity=0.309 Sum_probs=198.2
Q ss_pred HhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhh--hhHHHHHHHHHHHHHhcc---CCCcccceeeeeecC
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLS--EISVQREFLNEIKALTEI---RHRNIVKFYGFCSHP 473 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~ 473 (673)
..++|++.+.||+|+||+||+|++ .+|+.||||++...... .......+.+|+.+++++ +||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357899999999999999999986 47999999998653221 111123455677776666 499999999999765
Q ss_pred C-----eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEE
Q 005864 474 R-----HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARV 548 (673)
Q Consensus 474 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 548 (673)
. ..++||||++ |+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP-PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEE
Confidence 4 4789999998 599999987643 3489999999999999999999999 9999999999999999999999
Q ss_pred ecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cc
Q 005864 549 SDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MN 621 (673)
Q Consensus 549 ~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~ 621 (673)
+|||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......+..... ..
T Consensus 162 ~Dfg~a~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (308)
T 3g33_A 162 ADFGLARIYSYQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240 (308)
T ss_dssp CSCSCTTTSTTC-CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred eeCccccccCCC-cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 999999865432 2334567899999999999999999999999999999999999999643322110000 00
Q ss_pred cccc-------cccCCCCCCC-CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 622 LSLN-------EILDPRLPLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 622 ~~~~-------~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+. ..+.+..+.+ .....+.+.++.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 0000 0000000000 0001123356889999999999999999999985
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-41 Score=340.03 Aligned_cols=253 Identities=28% Similarity=0.454 Sum_probs=195.9
Q ss_pred cCCCccceeccCCcEEEEEEEeC--CCC--EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP--SGE--VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
++|++.+.||+|+||+||+|++. +++ .||||+++..........+.+.+|+.++.+++||||+++++++..+. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 57899999999999999999753 333 68999987654444556788999999999999999999999998765 88
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+|+||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 97 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp EEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eeEecccCCCHHHHHHhcc--CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccccc
Confidence 9999999999999997643 4588999999999999999999999 9999999999999999999999999999887
Q ss_pred CCCCCC---ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC--C
Q 005864 558 KPGSSN---WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP--R 631 (673)
Q Consensus 558 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~ 631 (673)
...... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ ....+... .
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--------~~~~~~~~~~~ 243 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ--------ILHKIDKEGER 243 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------HHHHHHTSCCC
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH--------HHHHHHccCCC
Confidence 544332 223457788999999998889999999999999999999 999987432211 11111111 1
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+.+ ...+.++.+++.+||+.||++|||+.++++.|+
T Consensus 244 ~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~ 280 (291)
T 1u46_A 244 LPRP----EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLL 280 (291)
T ss_dssp CCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC----cCcCHHHHHHHHHHccCCcccCcCHHHHHHHHH
Confidence 1111 123446899999999999999999999999886
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-41 Score=349.63 Aligned_cols=256 Identities=11% Similarity=0.018 Sum_probs=184.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc--CCCccccee-------eeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI--RHRNIVKFY-------GFCS 471 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~-------~~~~ 471 (673)
.+|.+.+.||+|+||+||+|.+. +|+.||||++...........+.+.+|+.++..+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45888999999999999999865 7999999999876544555567788885544444 699988755 4443
Q ss_pred cC-----------------CeeeEEEecccCCChHHHHhcCCCCccchHHHH------HHHHHHHHHHHHHHhhcCCCCe
Q 005864 472 HP-----------------RHSFLVYECLERGSLAEILSNDGSIKEFSWIVR------TNVIKSVANALSYMHHDCFPPI 528 (673)
Q Consensus 472 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~~i~~~l~~LH~~~~~~i 528 (673)
.+ ...++||||++ |+|.+++...+ ..+.+..+ ..++.||++||+|||++ +|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~i 215 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD--FVYVFRGDEGILALHILTAQLIRLAANLQSK---GL 215 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH--HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc--cccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CC
Confidence 22 33799999999 79999998642 22344555 77889999999999999 99
Q ss_pred EEecCCCCCeEeCCCCceEEecccceeecCCCCCCceeccccccccccccccc--CCcCcchhHHHHHHHHHHHHhCCCC
Q 005864 529 VHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHP 606 (673)
Q Consensus 529 vH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p 606 (673)
+||||||+||+++.++.+||+|||+++.... ......+++.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGT---RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETTC---EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecCC---CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999987642 2224567799999999987 6799999999999999999999999
Q ss_pred CcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 607 RDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
|........... ...............+ .....+..+.+++.+||+.||++|||+.|+++
T Consensus 293 f~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 293 FGLVTPGIKGSW-KRPSLRVPGTDSLAFG--SCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TTBCCTTCTTCC-CBCCTTSCCCCSCCCT--TSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCcCcccccch-hhhhhhhccccccchh--hccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 975422111000 0000011111111111 11133456899999999999999999999874
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=336.75 Aligned_cols=257 Identities=18% Similarity=0.256 Sum_probs=199.8
Q ss_pred HhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeee-ecCCeee
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFC-SHPRHSF 477 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~ 477 (673)
..++|++.+.||+|+||+||+|.. .+++.||||++..... .+.+.+|+.++..++|++++..++++ ..++..+
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNV 81 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceE
Confidence 457899999999999999999976 5789999998654321 23577899999999988877777666 5677889
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe---CCCCceEEecccce
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL---SSEYEARVSDFGIA 554 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~ 554 (673)
+||||+ +++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||++
T Consensus 82 lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a 155 (296)
T 4hgt_A 82 MVMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155 (296)
T ss_dssp EEEECC-CCBHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred EEEEcc-CCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence 999999 899999998543 3589999999999999999999999 99999999999999 78899999999999
Q ss_pred eecCCCCC-------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccc
Q 005864 555 KFLKPGSS-------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEI 627 (673)
Q Consensus 555 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 627 (673)
........ ......||+.|+|||.+.+..++.++|||||||++|||++|+.||......... .....+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-----~~~~~~ 230 (296)
T 4hgt_A 156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKR-----QKYERI 230 (296)
T ss_dssp EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSS-----SHHHHH
T ss_pred eeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhh-----hhhhhh
Confidence 87754332 123467899999999999999999999999999999999999999753321110 011111
Q ss_pred cCCCCCCCC-cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 628 LDPRLPLPS-RNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 628 ~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.......+. ......+.++.+++.+||+.||++|||++++++.|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (296)
T 4hgt_A 231 SEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred hcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHH
Confidence 111111110 000112356899999999999999999999999886
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-41 Score=352.48 Aligned_cols=260 Identities=23% Similarity=0.360 Sum_probs=191.0
Q ss_pred HhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCC--e
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPR--H 475 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~ 475 (673)
..++|++.+.||+|+||.||+|.+ .+|+.||||++..... .....+.+.+|+.++..+. ||||+++++++..++ .
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQ-NSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--C-CHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 457899999999999999999976 4799999999865432 2334677889999999997 999999999997544 6
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccccee
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 555 (673)
.++||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 157 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSR 157 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEecccC-cCHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccc
Confidence 899999998 4999999763 478899999999999999999999 99999999999999999999999999998
Q ss_pred ecCCC---------------------CCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccc
Q 005864 556 FLKPG---------------------SSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLL 613 (673)
Q Consensus 556 ~~~~~---------------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 613 (673)
.+... ....+...||+.|+|||++.+ ..++.++||||+||++|||++|+.||......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 237 (388)
T 3oz6_A 158 SFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTM 237 (388)
T ss_dssp ESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred cccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 76431 112234579999999999876 67899999999999999999999999754322
Q ss_pred ccccccc-------ccccccccCC----------------CCCCCCcchH-------------HHHHHHHHHHHHcccCC
Q 005864 614 SSSSSNM-------NLSLNEILDP----------------RLPLPSRNIQ-------------DKLISILEVALLCLEES 657 (673)
Q Consensus 614 ~~~~~~~-------~~~~~~~~~~----------------~~~~~~~~~~-------------~~~~~l~~li~~cl~~d 657 (673)
....... ......+..+ .... ..... ..+.++.+++.+||+.|
T Consensus 238 ~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~d 316 (388)
T 3oz6_A 238 NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNK-RDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFN 316 (388)
T ss_dssp HHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----C-CCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSS
T ss_pred HHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCH-HHhCcchhhhcccccccccCCHHHHHHHHHhhccC
Confidence 1110000 0000000000 0000 00000 12346889999999999
Q ss_pred CCCCCCHHHHHH
Q 005864 658 PESRPTMQTVCQ 669 (673)
Q Consensus 658 p~~Rps~~~v~~ 669 (673)
|++|||++|+++
T Consensus 317 P~~R~t~~e~l~ 328 (388)
T 3oz6_A 317 PNKRISANDALK 328 (388)
T ss_dssp GGGSCCHHHHTT
T ss_pred cccCCCHHHHhC
Confidence 999999999975
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=340.00 Aligned_cols=251 Identities=26% Similarity=0.385 Sum_probs=201.9
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
..+.|++.+.||+|+||.||+|... +|+.||+|.+.... ..+.+.+|+.++.+++||||+++++++..++..++
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 3567999999999999999999775 59999999986532 24578899999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
||||+++|+|.+++.... ..+++..+..++.|++.||.|||+. +++|+||||+||+++.++.+||+|||++....
T Consensus 102 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLRN--KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176 (314)
T ss_dssp EEECCTTEEHHHHHHHHT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECB
T ss_pred EeecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhh
Confidence 999999999999997432 4588999999999999999999999 99999999999999999999999999998776
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
..........|++.|+|||.+.+..++.++||||||+++|||++|+.||.......... .......+....
T Consensus 177 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-----~~~~~~~~~~~~---- 247 (314)
T 3com_A 177 DTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF-----MIPTNPPPTFRK---- 247 (314)
T ss_dssp TTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-----HHHHSCCCCCSS----
T ss_pred hhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH-----HHhcCCCcccCC----
Confidence 54444455678999999999999899999999999999999999999987433221100 000001111111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+..+.+++.+||+.||.+|||+.|+++
T Consensus 248 ~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 248 PELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1123446889999999999999999999975
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-40 Score=335.51 Aligned_cols=254 Identities=22% Similarity=0.348 Sum_probs=207.4
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchh------hhhHHHHHHHHHHHHHhccC-CCcccceeeeeec
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLL------SEISVQREFLNEIKALTEIR-HRNIVKFYGFCSH 472 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~ 472 (673)
.++|++.+.||+|+||.||+|... +|+.||||++..... ......+.+.+|++++.+++ ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 468999999999999999999775 689999999865421 11234567889999999995 9999999999999
Q ss_pred CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 473 PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
++..++||||+++++|.+++... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEeccc
Confidence 99999999999999999999864 3588999999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCCCceecccccccccccccc------cCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccc
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAY------TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNE 626 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~------~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 626 (673)
++....... ......+++.|+|||.+. ...++.++||||||+++|||++|+.||....... ....
T Consensus 170 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~~ 240 (298)
T 1phk_A 170 FSCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML--------MLRM 240 (298)
T ss_dssp TCEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHH
T ss_pred chhhcCCCc-ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH--------HHHH
Confidence 998775432 334567899999999875 4568899999999999999999999986432211 1111
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 627 ILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+.......+.......+..+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 241 IMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 2222222222223344567999999999999999999999975
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-41 Score=345.91 Aligned_cols=261 Identities=19% Similarity=0.225 Sum_probs=196.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC----CCCEEEEEeeccchhhhhH--------HHHHHHHHHHHHhccCCCcccceeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP----SGEVVAVKKFHSLLLSEIS--------VQREFLNEIKALTEIRHRNIVKFYGF 469 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~--------~~~~~~~e~~~l~~l~h~niv~l~~~ 469 (673)
++|.+.+.||+|+||+||+|... ++..||+|++......... ....+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 57899999999999999999875 5788999998754321111 12346788999999999999999999
Q ss_pred eec----CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-
Q 005864 470 CSH----PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY- 544 (673)
Q Consensus 470 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~- 544 (673)
+.. ....++||||+ +++|.+++...+ .+++..+..++.||+.||+|||+. +|+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~ 189 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG---TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNP 189 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG---BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSST
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCC
Confidence 987 67889999999 999999998653 689999999999999999999999 999999999999999887
Q ss_pred -ceEEecccceeecCCCCC-------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccc
Q 005864 545 -EARVSDFGIAKFLKPGSS-------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS 616 (673)
Q Consensus 545 -~~kl~Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~ 616 (673)
.+||+|||+++.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~ 269 (345)
T 2v62_A 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA 269 (345)
T ss_dssp TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH
T ss_pred CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH
Confidence 999999999987643221 123457899999999999999999999999999999999999999632110000
Q ss_pred ccccccccccccCCCCCCCC-c--chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 617 SSNMNLSLNEILDPRLPLPS-R--NIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
. ..........++... . .....+.++.+++.+||+.||++|||++++++.|++
T Consensus 270 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 325 (345)
T 2v62_A 270 V----QTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNP 325 (345)
T ss_dssp H----HHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCT
T ss_pred H----HHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 0 000000000111000 0 000223468999999999999999999999999864
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=334.44 Aligned_cols=248 Identities=21% Similarity=0.302 Sum_probs=200.1
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeee
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 477 (673)
..++|++.+.||+|+||+||+|... +++.||+|++....... .....+.+|+..+..+ +||||+++++++.+++..+
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGS-VDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTS-HHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccccc-HHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 3467999999999999999999775 79999999987643332 3456788999999999 9999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCC-CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-------------
Q 005864 478 LVYECLERGSLAEILSNDGS-IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE------------- 543 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~------------- 543 (673)
+||||+++|+|.+++..... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------------
T ss_pred EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccc
Confidence 99999999999999976421 13488999999999999999999999 99999999999999844
Q ss_pred ------CceEEecccceeecCCCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccc
Q 005864 544 ------YEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS 616 (673)
Q Consensus 544 ------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~ 616 (673)
..+||+|||.+....... ...|++.|+|||.+.+. .++.++||||||+++|||++|..|+......
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~--- 237 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW--- 237 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH---
T ss_pred cccCCceEEEEcccccccccCCcc----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHH---
Confidence 479999999998765432 24589999999998765 5668999999999999999999876432211
Q ss_pred ccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 617 SSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.....+.... ..+.++.+++.+||+.||++|||+.|+++
T Consensus 238 --------~~~~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 238 --------HEIRQGRLPRIPQ---VLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp --------HHHHTTCCCCCSS---CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --------HHHHcCCCCCCCc---ccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 1111122211111 12345889999999999999999999985
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=335.81 Aligned_cols=256 Identities=18% Similarity=0.258 Sum_probs=202.3
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeee-ecCCeeeE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFC-SHPRHSFL 478 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~l 478 (673)
.++|++.+.||+|+||+||+|+. .+|+.||||++..... .+.+.+|+.++..++|+++++.++++ ..++..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 46799999999999999999976 5799999998765422 24578999999999988877776665 56677899
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeC---CCCceEEeccccee
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS---SEYEARVSDFGIAK 555 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~~~ 555 (673)
||||+ +++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++ .++.+||+|||++.
T Consensus 83 v~e~~-~~~L~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 156 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEEec-CCCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence 99999 899999998543 4589999999999999999999999 999999999999994 78899999999998
Q ss_pred ecCCCCC-------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccccc
Q 005864 556 FLKPGSS-------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEIL 628 (673)
Q Consensus 556 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 628 (673)
....... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||........ ......+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~~~~ 231 (296)
T 3uzp_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK-----RQKYERIS 231 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS-----SSHHHHHH
T ss_pred cccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhh-----hhhhhhhc
Confidence 7754432 12446789999999999999999999999999999999999999975322111 00111111
Q ss_pred CCCCCCCC-cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 629 DPRLPLPS-RNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 629 ~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
......+. ......+.++.+++.+||+.||++|||++++++.|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 276 (296)
T 3uzp_A 232 EKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 276 (296)
T ss_dssp HHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHH
T ss_pred ccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHH
Confidence 11111110 000122346899999999999999999999999986
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-41 Score=346.68 Aligned_cols=262 Identities=20% Similarity=0.272 Sum_probs=193.8
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
..++|++.+.||+|+||+||+|... +|+.||||++..... .....+.+.+|+.++++++||||+++++++.+++..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc-ccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 3568999999999999999999754 789999999875432 22345677899999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeC-----CCCceEEecccc
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS-----SEYEARVSDFGI 553 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-----~~~~~kl~Dfg~ 553 (673)
||||+++ +|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++ +++.+||+|||+
T Consensus 111 v~e~~~~-~L~~~~~~~~---~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~ 183 (329)
T 3gbz_A 111 IFEYAEN-DLKKYMDKNP---DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGL 183 (329)
T ss_dssp EEECCSE-EHHHHHHHCT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTH
T ss_pred EEecCCC-CHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCC
Confidence 9999985 9999998764 488999999999999999999999 999999999999994 455699999999
Q ss_pred eeecCCCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------ccccc
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-------NLSLN 625 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-------~~~~~ 625 (673)
+..............+|+.|+|||++.+. .++.++||||+||++|||++|+.||......+...... ...+.
T Consensus 184 a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (329)
T 3gbz_A 184 ARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP 263 (329)
T ss_dssp HHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred ccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhh
Confidence 98775544445556789999999998874 48999999999999999999999997433221100000 00000
Q ss_pred ---c--ccCCCCCC-CCcchH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 ---E--ILDPRLPL-PSRNIQ-----DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ---~--~~~~~~~~-~~~~~~-----~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
. ......+. ...... ..+.++.+++.+||+.||++|||++|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0 00000000 000111 12356889999999999999999999986
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=332.08 Aligned_cols=252 Identities=21% Similarity=0.291 Sum_probs=200.6
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhh-hHHHHHHHHHHHHHhccCCCcccceeeeee--cCCee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSE-ISVQREFLNEIKALTEIRHRNIVKFYGFCS--HPRHS 476 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~ 476 (673)
.++|++.+.||+|+||.||+|... +++.||+|++....... ....+.+.+|+.++++++||||+++++++. +.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999874 68999999987653322 334678999999999999999999999984 45678
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||++++ |.+++..... ..+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPE-KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTT-CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEehhccCC-HHHHHHhCcc-cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 9999999986 7777766432 4689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC--CceecccccccccccccccCC--cCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCC
Q 005864 557 LKPGSS--NWTEFAGTFGYVAPELAYTMK--VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRL 632 (673)
Q Consensus 557 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~--~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (673)
...... ......|++.|+|||.+.+.. ++.++||||||+++|||++|+.||......+ ....+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--------~~~~i~~~~~ 230 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYK--------LFENIGKGSY 230 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--------HHHHHHHCCC
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHH--------HHHHHhcCCC
Confidence 654322 223456899999999987644 4779999999999999999999997432211 1111112222
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.. .+..+.+++.+||+.||++|||++|+++
T Consensus 231 ~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 231 AIPGD----CGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp CCCSS----SCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCCCc----cCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22222 2345889999999999999999999986
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=339.83 Aligned_cols=253 Identities=23% Similarity=0.390 Sum_probs=200.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEE--EEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVV--AVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~v--avK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 477 (673)
++|++.+.||+|+||.||+|+.. +|..+ |+|.++... .....+.+.+|++++.++ +||||+++++++.+++..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc--chHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 57899999999999999999764 56644 999886532 233456789999999999 8999999999999999999
Q ss_pred EEEecccCCChHHHHhcCC-------------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC
Q 005864 478 LVYECLERGSLAEILSNDG-------------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY 544 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 544 (673)
+||||+++|+|.+++...+ ....+++..++.++.|+++||+|||+. +|+||||||+||+++.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCC
Confidence 9999999999999998653 124589999999999999999999999 999999999999999999
Q ss_pred ceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccc
Q 005864 545 EARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLS 623 (673)
Q Consensus 545 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~ 623 (673)
.+||+|||+++..... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+.
T Consensus 180 ~~kL~Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~-------- 250 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL-------- 250 (327)
T ss_dssp CEEECCTTCEESSCEE-CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--------
T ss_pred eEEEcccCcCcccccc-ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHH--------
Confidence 9999999999743221 12233456789999999988889999999999999999998 9999874332111
Q ss_pred cccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 624 LNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 624 ~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+... ....+. ..+..+.+++.+||+.||++|||++|+++.|+
T Consensus 251 ~~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 296 (327)
T 1fvr_A 251 YEKLPQGYRLEKPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLN 296 (327)
T ss_dssp HHHGGGTCCCCCCT----TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhhcCCCCCCCC----CCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111111 111111 22345889999999999999999999999885
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-41 Score=367.09 Aligned_cols=252 Identities=25% Similarity=0.431 Sum_probs=205.3
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.++|++.+.||+|+||+||+|.+.++..||||+++.... ..+.|.+|+++|++++||||+++++++.+ +..++||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~ 340 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEee
Confidence 467888999999999999999998888999999875432 24678999999999999999999999876 6789999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.++++... ...+++.++..++.||++||+|||++ +|+||||||+|||+++++.+||+|||+++.....
T Consensus 341 e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 416 (535)
T 2h8h_A 341 EYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 416 (535)
T ss_dssp CCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH
T ss_pred ehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCC
Confidence 9999999999997532 13478999999999999999999999 9999999999999999999999999999765422
Q ss_pred CC-CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCCCCCc
Q 005864 561 SS-NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPSR 637 (673)
Q Consensus 561 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 637 (673)
.. ......++..|+|||.+.+..++.++|||||||++|||++ |+.||......+. ...+... +++.+.
T Consensus 417 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~--------~~~i~~~~~~~~~~- 487 (535)
T 2h8h_A 417 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV--------LDQVERGYRMPCPP- 487 (535)
T ss_dssp HHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHH--------HHHHHTTCCCCCCT-
T ss_pred ceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH--------HHHHHcCCCCCCCC-
Confidence 11 1123446788999999998899999999999999999999 9999874322111 1111111 122222
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+..+.+++.+||+.||++|||++++++.|++
T Consensus 488 ---~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~ 520 (535)
T 2h8h_A 488 ---ECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 520 (535)
T ss_dssp ---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred ---CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 233458899999999999999999999999864
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=341.29 Aligned_cols=255 Identities=25% Similarity=0.385 Sum_probs=201.7
Q ss_pred hcCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
.++|++.+.||+|+||.||+|++ .+++.||||.+.... .......+.+|+.++++++||||+++++++..++
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 106 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC--SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL 106 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc--chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC
Confidence 36799999999999999999974 357799999986432 2334567899999999999999999999999999
Q ss_pred eeeEEEecccCCChHHHHhcCCC----CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC---CCceE
Q 005864 475 HSFLVYECLERGSLAEILSNDGS----IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS---EYEAR 547 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~k 547 (673)
..++||||+++|+|.+++..... ...+++..++.++.|++.||.|||+. +|+||||||+||+++. +..+|
T Consensus 107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~k 183 (327)
T 2yfx_A 107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 183 (327)
T ss_dssp SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEE
Confidence 99999999999999999987542 13488999999999999999999999 9999999999999984 44699
Q ss_pred EecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccc
Q 005864 548 VSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSL 624 (673)
Q Consensus 548 l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~ 624 (673)
|+|||++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+ ..
T Consensus 184 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--------~~ 255 (327)
T 2yfx_A 184 IGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE--------VL 255 (327)
T ss_dssp ECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--------HH
T ss_pred ECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHH--------HH
Confidence 999999976533221 2234567889999999998899999999999999999998 999987432211 11
Q ss_pred ccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 625 NEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 625 ~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+... ....+. ..+..+.+++.+||+.||.+|||+.|+++.|+
T Consensus 256 ~~~~~~~~~~~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 256 EFVTSGGRMDPPK----NCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300 (327)
T ss_dssp HHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhcCCCCCCCC----CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 111111 111111 22345889999999999999999999999875
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=345.82 Aligned_cols=254 Identities=22% Similarity=0.347 Sum_probs=204.6
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhH--------------HHHHHHHHHHHHhccCCCccccee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEIS--------------VQREFLNEIKALTEIRHRNIVKFY 467 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~--------------~~~~~~~e~~~l~~l~h~niv~l~ 467 (673)
++|.+.+.||+|+||.||+|.. +|+.||||++......... ..+.+.+|+.++.+++||||++++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 5789999999999999999988 9999999998764332211 127899999999999999999999
Q ss_pred eeeecCCeeeEEEecccCCChHHH------HhcCCCCccchHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEe
Q 005864 468 GFCSHPRHSFLVYECLERGSLAEI------LSNDGSIKEFSWIVRTNVIKSVANALSYMHH-DCFPPIVHRDISSKNVLL 540 (673)
Q Consensus 468 ~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill 540 (673)
+++.+++..++||||+++|+|.++ +.... ...+++..+..++.|++.||+|||+ . +++||||||+||++
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY-TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS-CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc-ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 999999999999999999999998 55421 2568999999999999999999999 8 99999999999999
Q ss_pred CCCCceEEecccceeecCCCCCCceecccccccccccccccC-CcCc-chhHHHHHHHHHHHHhCCCCCccccccccccc
Q 005864 541 SSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTM-KVTE-KCDVYSFGVLALEVIKGKHPRDFISLLSSSSS 618 (673)
Q Consensus 541 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~-~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~ 618 (673)
+.++.+||+|||.+...... ......|++.|+|||.+.+. .++. ++||||||+++|||++|+.||........
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--- 260 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK--KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVE--- 260 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT--EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHH---
T ss_pred cCCCcEEEeccccccccccc--cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHH---
Confidence 99999999999999876433 33456789999999999877 6666 99999999999999999999974322100
Q ss_pred ccccccccccCCCCCCCC---------------cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 619 NMNLSLNEILDPRLPLPS---------------RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.......+. ......+.++.+++.+||+.||.+|||+.|+++
T Consensus 261 ----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 261 ----LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp ----HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ----HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 01111111111110 001223456899999999999999999999986
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-41 Score=345.80 Aligned_cols=261 Identities=24% Similarity=0.371 Sum_probs=200.0
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|+.. +|+.||||++.... ......+.+.+|+.++.+++||||+++++++.+.+..++||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 57889999999999999999775 59999999986543 23334567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 104 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 177 (331)
T 4aaa_A 104 EFVDHTILDDLELFPN---GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177 (331)
T ss_dssp ECCSEEHHHHHHHSTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecCCcchHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence 9999999998876543 488999999999999999999999 9999999999999999999999999999876554
Q ss_pred CCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc----------------ccc
Q 005864 561 SSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM----------------NLS 623 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~----------------~~~ 623 (673)
........|++.|+|||.+.+. .++.++||||+|+++|||++|+.||......+...... ...
T Consensus 178 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (331)
T 4aaa_A 178 GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPV 257 (331)
T ss_dssp ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGG
T ss_pred ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccc
Confidence 4444556789999999998775 68999999999999999999999997443221100000 000
Q ss_pred cccccCCCCCCCCc---chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 LNEILDPRLPLPSR---NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 ~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+....... .....+..+.+++.+||+.||++|||++|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 258 FAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00001111111000 11123456999999999999999999999875
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=333.95 Aligned_cols=247 Identities=28% Similarity=0.411 Sum_probs=195.6
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-CeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP-RHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lv 479 (673)
.++|++.+.||+|+||+||+|+. .|+.||||.++... ..+.+.+|++++.+++||||+++++++.+. +..++|
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv 93 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 93 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEE
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh-----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEE
Confidence 46789999999999999999987 48899999986532 356789999999999999999999997654 578999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.+++...+ ...+++..+..++.|+++||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 94 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 94 TEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp ECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred EecCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 99999999999997643 12378899999999999999999999 999999999999999999999999999976533
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCCCCCc
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPSR 637 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 637 (673)
. .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||......+. ...+... ....+
T Consensus 170 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~--------~~~~~~~~~~~~~-- 236 (278)
T 1byg_A 170 T---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDV--------VPRVEKGYKMDAP-- 236 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGH--------HHHHTTTCCCCCC--
T ss_pred c---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHH--------HHHHhcCCCCCCc--
Confidence 2 223457889999999998899999999999999999998 9999874322111 1111111 11111
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+..+.+++.+||+.||++|||+.|+++.|+
T Consensus 237 --~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~ 269 (278)
T 1byg_A 237 --DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 269 (278)
T ss_dssp --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --ccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHH
Confidence 123446889999999999999999999999886
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-40 Score=336.77 Aligned_cols=257 Identities=21% Similarity=0.297 Sum_probs=200.8
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeee----cCCe
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS----HPRH 475 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----~~~~ 475 (673)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++. ....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence 36799999999999999999976 57999999988653 2334678899999999999999999999986 3457
Q ss_pred eeEEEecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 476 SFLVYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
.++|+||+++|+|.+++.... ....+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 889999999999999997631 124689999999999999999999999 9999999999999999999999999998
Q ss_pred eecCCCCCC---------ceecccccccccccccccCC---cCcchhHHHHHHHHHHHHhCCCCCccccccccccccccc
Q 005864 555 KFLKPGSSN---------WTEFAGTFGYVAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNL 622 (673)
Q Consensus 555 ~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~---~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~ 622 (673)
......... .....|++.|+|||.+.+.. ++.++||||||+++|||++|+.||+........ ...
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~ 258 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS---VAL 258 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC---HHH
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch---hhH
Confidence 765321111 12245689999999987544 688999999999999999999998643211100 000
Q ss_pred ccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 623 SLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.... ....+.. ...+..+.+++.+||+.||.+|||++|+++.|+
T Consensus 259 ~~~~--~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 302 (317)
T 2buj_A 259 AVQN--QLSIPQS----PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLE 302 (317)
T ss_dssp HHHC--C--CCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred Hhhc--cCCCCcc----ccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhh
Confidence 0000 0111111 122346899999999999999999999999985
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=345.32 Aligned_cols=256 Identities=20% Similarity=0.290 Sum_probs=195.0
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC------
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR------ 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 474 (673)
++|++.+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+.+++.++||||+++++++..++
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS-SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCcccc-CHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 5788999999999999999976 4799999999865432 3344677899999999999999999999997653
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++||||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 175 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLA 175 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecc
Confidence 459999999 78999999763 478899999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccccc-
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLSLN- 625 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~~~- 625 (673)
+..... .....+|+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+..... ......
T Consensus 176 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 176 RQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp EECCSS---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred cccccc---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 876432 344678999999999877 67999999999999999999999999754322110000 000000
Q ss_pred -------cccC--CCCCCC--CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 -------EILD--PRLPLP--SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 -------~~~~--~~~~~~--~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+. +..... .......+..+.+++.+||+.||++|||++|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0000 000000 0011123456889999999999999999999986
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-40 Score=349.62 Aligned_cols=200 Identities=22% Similarity=0.361 Sum_probs=169.2
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-----C
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP-----R 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 474 (673)
.++|++.+.||+|+||.||+|.+. +|+.||||++.... ......+.+.+|+.+++.++||||+++++++... +
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF-EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT-TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh-cChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 357999999999999999999764 68899999997543 2334567899999999999999999999999765 5
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++||||+++ +|.+++... ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~lv~e~~~~-~L~~~~~~~---~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 104 ELYIVLEIADS-DLKKLFKTP---IFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp CEEEEEECCSE-EHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEecCCc-CHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 68999999875 999999865 3589999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC----------------------Cceeccccccccccccc-ccCCcCcchhHHHHHHHHHHHHhCCCCCc
Q 005864 555 KFLKPGSS----------------------NWTEFAGTFGYVAPELA-YTMKVTEKCDVYSFGVLALEVIKGKHPRD 608 (673)
Q Consensus 555 ~~~~~~~~----------------------~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~il~el~~g~~p~~ 608 (673)
+....... ......||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 97654321 23556789999999986 56679999999999999999999766654
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=366.91 Aligned_cols=244 Identities=25% Similarity=0.361 Sum_probs=196.0
Q ss_pred eeccCCcEEEEEEEeC---CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEecccC
Q 005864 409 CIGIGGQASVYRGELP---SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 409 ~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
.||+|+||+||+|.+. ++..||||+++... .....+++.+|++++++++|||||++++++.. +..++||||+++
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~ 419 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGG 419 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCC
Confidence 7999999999999763 46679999997642 22346789999999999999999999999976 568999999999
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCc-
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW- 564 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~- 564 (673)
|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.........
T Consensus 420 g~L~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~ 494 (613)
T 2ozo_A 420 GPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT 494 (613)
T ss_dssp CBHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred CcHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence 99999997643 4589999999999999999999999 99999999999999999999999999998664332211
Q ss_pred --eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCCCCCcchH
Q 005864 565 --TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPSRNIQ 640 (673)
Q Consensus 565 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 640 (673)
....+++.|+|||++.+..++.++|||||||++|||++ |+.||......+. ...+... ++..+.
T Consensus 495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~--------~~~i~~~~~~~~p~---- 562 (613)
T 2ozo_A 495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV--------MAFIEQGKRMECPP---- 562 (613)
T ss_dssp -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHH--------HHHHHTTCCCCCCT----
T ss_pred eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH--------HHHHHcCCCCCCCC----
Confidence 22345688999999999999999999999999999998 9999975332111 1111111 222222
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+.++.+++.+||+.||++||++.++++.|+
T Consensus 563 ~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 594 (613)
T 2ozo_A 563 ECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 594 (613)
T ss_dssp TCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 23446899999999999999999999999886
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=341.32 Aligned_cols=259 Identities=26% Similarity=0.383 Sum_probs=204.9
Q ss_pred cCCCccceeccCCcEEEEEEEe-----CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC--
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-----PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR-- 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-- 474 (673)
++|++.+.||+|+||.||+|++ .+|+.||||++... .....+.+.+|++++++++||||+++++++...+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 5688899999999999999973 46889999998753 2334678999999999999999999999987644
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~ 192 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKHK--ERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLT 192 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHST--TSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred ceEEEEECCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcch
Confidence 7899999999999999998754 3588999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCC---ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccc--ccccccc-----cccc
Q 005864 555 KFLKPGSSN---WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLL--SSSSSNM-----NLSL 624 (673)
Q Consensus 555 ~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~~~-----~~~~ 624 (673)
......... .....++..|+|||.+.+..++.++||||||+++|||++|..|+...... +...... ....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (326)
T 2w1i_A 193 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 272 (326)
T ss_dssp EECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred hhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHH
Confidence 887544322 12345677899999999888999999999999999999999997632110 0000000 0001
Q ss_pred ccccCC--CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 625 NEILDP--RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 625 ~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+.+.. +.+.+. ..+.++.+++.+||+.||++|||+.|+++.|+
T Consensus 273 ~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~ 318 (326)
T 2w1i_A 273 IELLKNNGRLPRPD----GCPDEIYMIMTECWNNNVNQRPSFRDLALRVD 318 (326)
T ss_dssp HHHHHTTCCCCCCT----TCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred HHHhhcCCCCCCCC----cccHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 111111 122222 23346899999999999999999999999986
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=334.56 Aligned_cols=245 Identities=20% Similarity=0.375 Sum_probs=202.0
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec------
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH------ 472 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------ 472 (673)
...+|++.+.||+|+||.||+|... +|+.||+|++.... ..+.+|++++.+++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence 3467899999999999999999875 79999999986542 245689999999999999999998854
Q ss_pred ----------CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC
Q 005864 473 ----------PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS 542 (673)
Q Consensus 473 ----------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~ 542 (673)
....++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+. +|+||||||+||++++
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVD 157 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEE
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcC
Confidence 445799999999999999997643 24588999999999999999999999 9999999999999999
Q ss_pred CCceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccc
Q 005864 543 EYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNL 622 (673)
Q Consensus 543 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~ 622 (673)
++.+||+|||++....... ......+++.|+|||.+.+..++.++||||||+++|||++|..|+......
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~--------- 227 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDG-KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKF--------- 227 (284)
T ss_dssp TTEEEECCCTTCEESSCCS-CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHH---------
T ss_pred CCCEEECcchhheeccccc-cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHH---------
Confidence 9999999999998775433 234456899999999999999999999999999999999999997532111
Q ss_pred ccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 623 SLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.........+ . ..+..+.+++.+||+.||++|||+.|+++.|+
T Consensus 228 -~~~~~~~~~~--~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~ 270 (284)
T 2a19_B 228 -FTDLRDGIIS--D----IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLT 270 (284)
T ss_dssp -HHHHHTTCCC--T----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -HHHhhccccc--c----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 1111111111 1 12234789999999999999999999999875
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=344.27 Aligned_cols=261 Identities=23% Similarity=0.303 Sum_probs=199.0
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--------
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH-------- 472 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 472 (673)
++|++.+.||+|+||+||+|+. .+|+.||||++...... ......+.+|+.+++.++||||+++++++..
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCS-SSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccccc-ccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 5789999999999999999977 57999999998654322 2234567899999999999999999999976
Q ss_pred CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 473 PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
.+..++||||+++ +|.+.+.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVL--VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CceEEEEEeccCC-CHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence 3468999999986 7888776653 3589999999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCC----CCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-------cc
Q 005864 553 IAKFLKPGS----SNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-------NM 620 (673)
Q Consensus 553 ~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-------~~ 620 (673)
+++.+.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........... ..
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 998765322 22344678999999998876 4579999999999999999999999874322110000 00
Q ss_pred ccccc-----cccCC-C-CCCCCcchHHH------HHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 NLSLN-----EILDP-R-LPLPSRNIQDK------LISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 ~~~~~-----~~~~~-~-~~~~~~~~~~~------~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+. +..+. . ........... ...+.+++.+||+.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 00000 00000 0 00000111111 345889999999999999999999985
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-40 Score=331.87 Aligned_cols=249 Identities=23% Similarity=0.352 Sum_probs=198.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec----CCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH----PRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~ 476 (673)
..|.+.+.||+|+||+||+|... ++..||+|.+...... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC-HHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 34777889999999999999764 6889999998764332 3456789999999999999999999999864 4568
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCC--eEEecCCCCCeEeC-CCCceEEecccc
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPP--IVHRDISSKNVLLS-SEYEARVSDFGI 553 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~-~~~~~kl~Dfg~ 553 (673)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+. + ++||||||+||+++ +++.+||+|||+
T Consensus 105 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 9999999999999999864 3478899999999999999999999 7 99999999999998 788999999999
Q ss_pred eeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
+..... .......|++.|+|||.+. +.++.++||||+|+++|+|++|+.||........ ....+.....+
T Consensus 179 ~~~~~~--~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-------~~~~~~~~~~~ 248 (290)
T 1t4h_A 179 ATLKRA--SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-------IYRRVTSGVKP 248 (290)
T ss_dssp GGGCCT--TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-------HHHHHTTTCCC
T ss_pred cccccc--cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH-------HHHHHhccCCc
Confidence 975432 2334567899999999876 4589999999999999999999999874322111 11111111111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.......+.++.+++.+||+.||.+|||++|+++
T Consensus 249 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 249 --ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp --GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 1111122345899999999999999999999986
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=339.81 Aligned_cols=254 Identities=23% Similarity=0.306 Sum_probs=197.8
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhh-----hhHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLS-----EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
.++|.+.+.||+|+||.||+|... +|+.||||.+...... .......+.+|++++.+++||||+++++++..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 457999999999999999999765 6889999998654321 1223456889999999999999999999997665
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc---eEEecc
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE---ARVSDF 551 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Df 551 (673)
.++||||+++|+|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+||
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred -eEEEEecCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccC
Confidence 89999999999999999765 3588999999999999999999999 9999999999999987654 999999
Q ss_pred cceeecCCCCCCceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccccc
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEIL 628 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 628 (673)
|++...... .......|++.|+|||++. ...++.++||||||+++|||++|+.||....... .....+.
T Consensus 162 g~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------~~~~~~~ 233 (322)
T 2ycf_A 162 GHSKILGET-SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-------SLKDQIT 233 (322)
T ss_dssp TTCEECCCC-HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-------CHHHHHH
T ss_pred ccceecccc-cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-------HHHHHHH
Confidence 999876432 1223456899999999874 5678899999999999999999999987432110 0111111
Q ss_pred CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 629 DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 629 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..........+...+..+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 234 SGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 12222211222233456899999999999999999999985
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-40 Score=354.56 Aligned_cols=194 Identities=23% Similarity=0.377 Sum_probs=155.2
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-----Ce
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP-----RH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 475 (673)
++|++.+.||+|+||+||+|.+. +|+.||||++.... ......+.+.+|+.+++.++|||||++++++... ..
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF-EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh-cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 57999999999999999999765 79999999986543 2334567899999999999999999999999433 56
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccccee
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 555 (673)
.++||||+. |+|.+++... ..+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTP---VYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLAR 204 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEEeccc-cchhhhcccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccch
Confidence 899999985 6999999765 3589999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCC---------------------------CCceeccccccccccccc-ccCCcCcchhHHHHHHHHHHHHhC
Q 005864 556 FLKPGS---------------------------SNWTEFAGTFGYVAPELA-YTMKVTEKCDVYSFGVLALEVIKG 603 (673)
Q Consensus 556 ~~~~~~---------------------------~~~~~~~~~~~y~aPE~~-~~~~~~~~~Dv~slG~il~el~~g 603 (673)
...... .......||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 764321 122445789999999976 466799999999999999999994
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-41 Score=349.85 Aligned_cols=255 Identities=22% Similarity=0.298 Sum_probs=201.5
Q ss_pred cCCCccceeccCCcEEEEEEEe----CCCCEEEEEeeccchhh-hhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL----PSGEVVAVKKFHSLLLS-EISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 475 (673)
++|++.+.||+|+||+||+|+. .+|+.||||+++..... .....+.+.+|++++..+ +||||+++++++..++.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5789999999999999999977 47899999998754321 112345577899999999 69999999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccccee
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 555 (673)
.++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred EEEEeecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 999999999999999998653 488999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCC-Cceeccccccccccccccc--CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCC
Q 005864 556 FLKPGSS-NWTEFAGTFGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRL 632 (673)
Q Consensus 556 ~~~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (673)
....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .......+.....
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~----~~~~~~~~~~~~~ 283 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS----QAEISRRILKSEP 283 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC----HHHHHHHHHHCCC
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch----HHHHHHHHhccCC
Confidence 7643222 2334679999999999885 3478899999999999999999999873321111 0111111111222
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRP-----TMQTVCQL 670 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~~ 670 (673)
+.+. ..+..+.+++.+||+.||++|| +++|+++.
T Consensus 284 ~~~~----~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 284 PYPQ----EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp CCCT----TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred CCCc----ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 2222 2234588999999999999999 99999863
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-41 Score=339.54 Aligned_cols=252 Identities=21% Similarity=0.343 Sum_probs=197.7
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.+.|++.+.||+|+||+||+|... +|+.||+|.+.... ....+.+.+|+.++..++||||+++++++..++..++|
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC---HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 467899999999999999999875 58999999986542 22467888999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++++|.+++.... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 95 ~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLELD--RGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK 169 (302)
T ss_dssp EECCTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred EEeCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999987643 3588999999999999999999999 999999999999999999999999998764322
Q ss_pred CCCCceeccccccccccccc-----ccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCC
Q 005864 560 GSSNWTEFAGTFGYVAPELA-----YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~-----~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
.........|++.|+|||.+ .+..++.++||||||+++|||++|+.||......... ..+.....+.
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--------~~~~~~~~~~ 241 (302)
T 2j7t_A 170 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL--------LKIAKSDPPT 241 (302)
T ss_dssp HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH--------HHHHHSCCCC
T ss_pred cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH--------HHHhccCCcc
Confidence 11122345689999999988 3667899999999999999999999998743321110 0010011000
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.......+..+.+++.+||+.||++|||+.|+++
T Consensus 242 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 242 -LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -cCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0011223446889999999999999999999975
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-41 Score=349.43 Aligned_cols=255 Identities=16% Similarity=0.209 Sum_probs=199.4
Q ss_pred cCCCccceeccCCcEEEEEEEeCC---------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccc-------
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS---------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVK------- 465 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~------- 465 (673)
++|++.+.||+|+||+||+|+... ++.||+|.+... +.+.+|++++.+++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence 578999999999999999997753 889999998643 35778999999999999998
Q ss_pred --------eeeeeec-CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCC
Q 005864 466 --------FYGFCSH-PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSK 536 (673)
Q Consensus 466 --------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~ 536 (673)
+++++.. ++..++||||+ +++|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+
T Consensus 114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~ 188 (352)
T 2jii_A 114 TPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP-KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAE 188 (352)
T ss_dssp CTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGG
T ss_pred CCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHH
Confidence 5677765 67889999999 999999998652 24589999999999999999999999 9999999999
Q ss_pred CeEeCCCC--ceEEecccceeecCCCCC-------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCC
Q 005864 537 NVLLSSEY--EARVSDFGIAKFLKPGSS-------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPR 607 (673)
Q Consensus 537 Nill~~~~--~~kl~Dfg~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~ 607 (673)
||+++.++ .+||+|||+++.+..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||
T Consensus 189 NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 268 (352)
T 2jii_A 189 NIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPW 268 (352)
T ss_dssp GEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred HEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 99999998 899999999987643221 123357899999999999989999999999999999999999999
Q ss_pred cccccccccccccccccccccCC--CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 608 DFISLLSSSSSNMNLSLNEILDP--RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
......... ........... .+......+...+.++.+++.+||+.||++|||++|+++.|+
T Consensus 269 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~ 332 (352)
T 2jii_A 269 TNCLPNTED---IMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLE 332 (352)
T ss_dssp GGGTTCHHH---HHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred ccCCcCHHH---HHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHH
Confidence 754311100 00000000000 000000011122346899999999999999999999999986
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=339.56 Aligned_cols=254 Identities=25% Similarity=0.384 Sum_probs=195.8
Q ss_pred HHHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeec---
Q 005864 398 IRATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSH--- 472 (673)
Q Consensus 398 ~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~--- 472 (673)
....++|++.+.||+|+||.||+|++ .+|+.||||++..... ..+.+.+|+.++.++ +||||+++++++..
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (326)
T 2x7f_A 20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 95 (326)
T ss_dssp CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS----TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC-
T ss_pred cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc----cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC
Confidence 33467899999999999999999977 4799999999865322 246788999999999 89999999999976
Q ss_pred ---CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEe
Q 005864 473 ---PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVS 549 (673)
Q Consensus 473 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 549 (673)
.+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~ 171 (326)
T 2x7f_A 96 PGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLV 171 (326)
T ss_dssp -CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred ccccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEe
Confidence 467899999999999999998653 24588899999999999999999999 99999999999999999999999
Q ss_pred cccceeecCCCCCCceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccc
Q 005864 550 DFGIAKFLKPGSSNWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSL 624 (673)
Q Consensus 550 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 624 (673)
|||++..............|++.|+|||.+. +..++.++||||||+++|||++|+.||........... .
T Consensus 172 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~-----~ 246 (326)
T 2x7f_A 172 DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL-----I 246 (326)
T ss_dssp CCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-----H
T ss_pred eCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH-----h
Confidence 9999987654433344567899999999986 56789999999999999999999999874332211100 0
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 625 NEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+... . ...+..+.+++.+||+.||.+|||++|+++
T Consensus 247 ~~~~~~~~~--~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 247 PRNPAPRLK--S---KKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHSCCCCCS--C---SCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hcCccccCC--c---cccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 000011111 0 112345889999999999999999999986
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-41 Score=339.60 Aligned_cols=263 Identities=25% Similarity=0.414 Sum_probs=185.7
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
..++|++.+.||+|+||.||+|... +++.||||++..... ....+++.+|+.++.+++||||+++++++..++..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc--chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 3468999999999999999999764 689999999865422 2345678899999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcC-----CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccc
Q 005864 479 VYECLERGSLAEILSND-----GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGI 553 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~-----~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 553 (673)
||||+++|+|.+++... .....+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 99999999999998641 1224589999999999999999999999 999999999999999999999999999
Q ss_pred eeecCCCCC-----Cceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccc
Q 005864 554 AKFLKPGSS-----NWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEI 627 (673)
Q Consensus 554 ~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 627 (673)
+........ ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||...................
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~- 246 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS- 246 (303)
T ss_dssp HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCC-
T ss_pred hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCc-
Confidence 976543221 1234568999999999875 568999999999999999999999997543221110000000000
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...... ........+.++.+++.+||+.||.+|||+.|+++
T Consensus 247 ~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 247 LETGVQ-DKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TTC------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccccc-cchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 000000 00001122345889999999999999999999985
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-40 Score=341.23 Aligned_cols=257 Identities=20% Similarity=0.287 Sum_probs=193.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC------
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR------ 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 474 (673)
++|++.+.||+|+||+||+|... +|+.||||++..... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccC-ChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 57999999999999999999764 689999999875432 2344677889999999999999999999997654
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++||||+++ +|.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 174 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 174 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred ceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecc
Confidence 67999999986 78888863 378899999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccc-------------
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMN------------- 621 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~------------- 621 (673)
+..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......+.......
T Consensus 175 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 175 RTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTS
T ss_pred cccccc-cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 865432 223446789999999999999999999999999999999999999975432211000000
Q ss_pred -ccccccc--CC--------------CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 622 -LSLNEIL--DP--------------RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 622 -~~~~~~~--~~--------------~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....... .+ ..+.........+.++.+++.+||+.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0000000 00 011111122334667999999999999999999999986
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-40 Score=365.22 Aligned_cols=245 Identities=26% Similarity=0.389 Sum_probs=196.5
Q ss_pred ceeccCCcEEEEEEEeC---CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEeccc
Q 005864 408 QCIGIGGQASVYRGELP---SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLE 484 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 484 (673)
+.||+|+||+||+|.+. .++.||||+++... .+....+++.+|++++.+++|||||++++++.. +..++||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG-GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence 47999999999999552 46789999987643 233446789999999999999999999999965 45789999999
Q ss_pred CCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCC-
Q 005864 485 RGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN- 563 (673)
Q Consensus 485 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~- 563 (673)
+|+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.+......
T Consensus 453 ~g~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 453 LGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp TEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCCHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 99999999765 3588999999999999999999999 9999999999999999999999999999876543321
Q ss_pred --ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCCCCCcch
Q 005864 564 --WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPSRNI 639 (673)
Q Consensus 564 --~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 639 (673)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+. ...+... +...+.
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~--------~~~i~~~~~~~~p~--- 595 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV--------TAMLEKGERMGCPA--- 595 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--------HHHHHTTCCCCCCT---
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH--------HHHHHcCCCCCCCC---
Confidence 223456788999999999999999999999999999998 9999974332111 1111111 112222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+.++.+++.+||+.||++|||+++|++.|+
T Consensus 596 -~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~ 627 (635)
T 4fl3_A 596 -GCPREMYDLMNLCWTYDVENRPGFAAVELRLR 627 (635)
T ss_dssp -TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 23356899999999999999999999999986
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-40 Score=345.16 Aligned_cols=258 Identities=23% Similarity=0.346 Sum_probs=202.7
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||+||+|.+. +|+.||+|++.... .....+.+.+|+.++++++||||+++++++..++..++|
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 109 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 109 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEE
Confidence 357899999999999999999775 68999999987642 233567899999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.+++...+ .+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||++.....
T Consensus 110 ~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 110 MEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp ECCCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EECCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 99999999999998753 4788999999999999999999831 799999999999999999999999999875532
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc--------c-----------
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN--------M----------- 620 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~--------~----------- 620 (673)
. ......||+.|+|||++.+..++.++||||||+++|||++|+.||......+..... .
T Consensus 185 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 185 S--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp H--C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred c--cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence 1 223457899999999999999999999999999999999999999743221100000 0
Q ss_pred ---------------ccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 ---------------NLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
......+.....+. ......+.++.+++.+||+.||++|||++|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIVNEPPPK--LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp -----------CCCHHHHHHHHHHSCCCC--CCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred cccccccCCCCcccchhhhhHHhccCCCC--CCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 00000000000000 001112446889999999999999999999985
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-40 Score=343.66 Aligned_cols=270 Identities=21% Similarity=0.290 Sum_probs=201.7
Q ss_pred cHHHHHHHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhh--------hhHHHHHHHHHHHHHhccCCCccc
Q 005864 393 VYEEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLS--------EISVQREFLNEIKALTEIRHRNIV 464 (673)
Q Consensus 393 ~~~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~~~~e~~~l~~l~h~niv 464 (673)
...++....++|.+.+.||+|+||.||+|...+|+.||||++...... +....+.+.+|+.++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 456778888999999999999999999999888999999998653221 223457899999999999999999
Q ss_pred ceeeeeec-----CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeE
Q 005864 465 KFYGFCSH-----PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVL 539 (673)
Q Consensus 465 ~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil 539 (673)
++++++.. ....++||||++ |+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR--IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNIL 166 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT--SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEE
Confidence 99999843 336799999998 58888887643 4689999999999999999999999 9999999999999
Q ss_pred eCCCCceEEecccceeecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc
Q 005864 540 LSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS 618 (673)
Q Consensus 540 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~ 618 (673)
++.++.+||+|||++...... .......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~ 245 (362)
T 3pg1_A 167 LADNNDITICDFNLAREDTAD-ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNK 245 (362)
T ss_dssp ECTTCCEEECCTTC----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred EcCCCCEEEEecCcccccccc-cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999999999999999754332 22344678999999999876 6789999999999999999999999975332111000
Q ss_pred cc---------------ccccccccCCCC-CCCCcch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 619 NM---------------NLSLNEILDPRL-PLPSRNI----QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 619 ~~---------------~~~~~~~~~~~~-~~~~~~~----~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.. .....+.+.... ..+...+ ...+..+.+++.+||+.||++|||+.|+++
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 00 000000011111 1111111 122456889999999999999999999985
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=341.44 Aligned_cols=250 Identities=24% Similarity=0.333 Sum_probs=184.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeee--------
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCS-------- 471 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~-------- 471 (673)
.+|++.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|+.++.++. ||||+++++++.
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC---chHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 57899999999999999999764 7999999998553 2334677899999999996 999999999984
Q ss_pred cCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCC--eEEecCCCCCeEeCCCCceEEe
Q 005864 472 HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPP--IVHRDISSKNVLLSSEYEARVS 549 (673)
Q Consensus 472 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~ 549 (673)
.....++|+||++ |+|.+++........+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~ 180 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLC 180 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBC
T ss_pred CCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEe
Confidence 3445789999996 69999987643335689999999999999999999998 7 9999999999999999999999
Q ss_pred cccceeecCCCCCC------------ceeccccccccccccc---ccCCcCcchhHHHHHHHHHHHHhCCCCCccccccc
Q 005864 550 DFGIAKFLKPGSSN------------WTEFAGTFGYVAPELA---YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLS 614 (673)
Q Consensus 550 Dfg~~~~~~~~~~~------------~~~~~~~~~y~aPE~~---~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~ 614 (673)
|||++......... .....+|+.|+|||.+ .+..++.++||||||+++|||++|+.||.......
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~ 260 (337)
T 3ll6_A 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR 260 (337)
T ss_dssp CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH
Confidence 99999876433221 1134589999999998 56678999999999999999999999987432211
Q ss_pred ccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 615 SSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+.......+.. ...+..+.+++.+||+.||++|||+.|+++.|+
T Consensus 261 ------------~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 304 (337)
T 3ll6_A 261 ------------IVNGKYSIPPH--DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ 304 (337)
T ss_dssp -----------------CCCCTT--CCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred ------------hhcCcccCCcc--cccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 11111111100 011223778999999999999999999999885
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-40 Score=332.93 Aligned_cols=251 Identities=23% Similarity=0.371 Sum_probs=193.8
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec------
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH------ 472 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------ 472 (673)
..++|++.+.||+|+||.||+|+.. +|+.||||++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 79 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK 79 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhh
Confidence 3467899999999999999999764 7999999998643 2346788999999999999999999998854
Q ss_pred -------CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc
Q 005864 473 -------PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE 545 (673)
Q Consensus 473 -------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~ 545 (673)
.+..++||||+++|+|.+++.... ..+++..++.++.|+++||+|||++ +++||||||+||+++.++.
T Consensus 80 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 80 PMTAVKKKSTLFIQMEYCENGTLYDLIHSEN--LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp ------CEEEEEEEEECCCSCBHHHHHHHSC--GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSC
T ss_pred hhcccccCCceEEEEecCCCCCHHHhhhccc--cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCC
Confidence 456789999999999999998653 4578889999999999999999999 9999999999999999999
Q ss_pred eEEecccceeecCCCC--------------CCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccc
Q 005864 546 ARVSDFGIAKFLKPGS--------------SNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFI 610 (673)
Q Consensus 546 ~kl~Dfg~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~ 610 (673)
+||+|||++....... .......|++.|+|||.+.+. .++.++||||+|+++|||++ ||...
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~ 231 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG 231 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc
Confidence 9999999998654321 122345689999999998764 68999999999999999998 44311
Q ss_pred ccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 611 SLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
... ......+.......+.......+..+.+++.+||+.||++|||++|+++
T Consensus 232 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 232 MER-------VNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHH-------HHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhH-------HHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 100 0011111111222222222334456889999999999999999999986
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-40 Score=330.14 Aligned_cols=254 Identities=23% Similarity=0.331 Sum_probs=205.5
Q ss_pred HHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
...++|++.+.||+|+||+||+|... +++.||+|++...... ....+.+.+|++++++++||||+++++++...+..+
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc-hHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 34568999999999999999999775 7999999998754332 234677899999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC---CceEEecccce
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE---YEARVSDFGIA 554 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~~ 554 (673)
+|+||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.+ +.+||+|||++
T Consensus 98 lv~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKRK---RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EEECCCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEEccCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 9999999999999987643 488999999999999999999999 99999999999999764 46999999999
Q ss_pred eecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCC
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
....... ......+++.|+|||.+.+ .++.++||||||+++|+|++|+.||......+ ....+.......
T Consensus 172 ~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--------~~~~~~~~~~~~ 241 (287)
T 2wei_A 172 TCFQQNT-KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD--------ILKRVETGKYAF 241 (287)
T ss_dssp GTBCCCS-SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCCCC
T ss_pred eeecCCC-ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH--------HHHHHHcCCCCC
Confidence 8664332 2234568899999998865 48999999999999999999999987432211 111111222222
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+...+...+.++.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 242 DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 22222234456899999999999999999999986
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-39 Score=342.22 Aligned_cols=197 Identities=21% Similarity=0.304 Sum_probs=171.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc------CCCcccceeeeeecCC
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI------RHRNIVKFYGFCSHPR 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~~ 474 (673)
.+|++.+.||+|+||+||+|... +++.||||++.... ...+.+.+|+.++..+ .|+||+++++++...+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~----~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 172 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK----RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc----chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence 56899999999999999999665 58999999987532 2345677788888777 5779999999999999
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc--eEEeccc
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE--ARVSDFG 552 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfg 552 (673)
..++||||+. ++|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 173 ~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG 247 (429)
T 3kvw_A 173 HICMTFELLS-MNLYELIKKNKF-QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFG 247 (429)
T ss_dssp EEEEEECCCC-CBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred eEEEEEeccC-CCHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecc
Confidence 9999999997 599999987542 3489999999999999999999999 9999999999999999887 9999999
Q ss_pred ceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccc
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFI 610 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 610 (673)
++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 248 ~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 248 SSCYEHQR---VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp TCEETTCC---CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cceecCCc---ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 99865432 23467899999999999999999999999999999999999998643
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=340.26 Aligned_cols=259 Identities=23% Similarity=0.335 Sum_probs=200.4
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-----C
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP-----R 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 474 (673)
.++|++.+.||+|+||.||+|... +++.||||++... ......+.+.+|++++.+++||||+++++++... .
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT--TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc--cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 357999999999999999999765 6889999998753 2333457889999999999999999999999654 3
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++|+||+++ +|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~iv~e~~~~-~L~~~l~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 175 (364)
T 3qyz_A 104 DVYIVQDLMET-DLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLA 175 (364)
T ss_dssp CEEEEEECCSE-EHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEcccCc-CHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcce
Confidence 67999999985 999999764 388999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC---Cceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------ccc
Q 005864 555 KFLKPGSS---NWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-------NLS 623 (673)
Q Consensus 555 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-------~~~ 623 (673)
........ ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||......+...... ...
T Consensus 176 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 255 (364)
T 3qyz_A 176 RVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255 (364)
T ss_dssp EECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHH
T ss_pred EecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 87654322 1244578999999998654 458999999999999999999999997543221110000 000
Q ss_pred ccc--------c---cCCCCCCC-CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 LNE--------I---LDPRLPLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 ~~~--------~---~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
... . .......+ .......+.++.+++.+||+.||++|||++|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 0 00000000 0001122356889999999999999999999985
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=334.22 Aligned_cols=252 Identities=21% Similarity=0.306 Sum_probs=173.8
Q ss_pred hcCCCccc-eeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec----CC
Q 005864 401 TKNFDAEQ-CIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH----PR 474 (673)
Q Consensus 401 ~~~~~~~~-~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~ 474 (673)
.++|.+.+ .||+|+||+||+|... +|+.||||++.... ...+ +....+..++||||+++++++.. ..
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~---e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 99 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQ---EVDHHWQASGGPHIVCILDVYENMHHGKR 99 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHH---HHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHH---HHHHHHHhcCCCChHHHHHHHhhccCCCc
Confidence 35788854 6999999999999776 69999999986431 1122 22334566799999999999875 45
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC---CCceEEecc
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS---EYEARVSDF 551 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Df 551 (673)
..++||||+++|+|.+++..... ..+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Df 175 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQERGD-QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDF 175 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC-C-CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred eEEEEEeccCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecc
Confidence 58999999999999999987543 4689999999999999999999999 9999999999999986 455999999
Q ss_pred cceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
|++...... ......+|+.|+|||++.+..++.++||||||+++|||++|+.||......... ......+....
T Consensus 176 g~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----~~~~~~~~~~~ 249 (336)
T 3fhr_A 176 GFAKETTQN--ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS----PGMKRRIRLGQ 249 (336)
T ss_dssp TTCEEC------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------
T ss_pred ccceecccc--ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh----hhHHHhhhccc
Confidence 999876432 234457899999999998889999999999999999999999998643221110 00111111122
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+...+...+.++.+++.+||+.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 250 YGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp -CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 22222222334556899999999999999999999986
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-40 Score=336.65 Aligned_cols=255 Identities=21% Similarity=0.335 Sum_probs=198.4
Q ss_pred HhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
..++|++.+.||+|+||+||+|.... .||+|+++..... ....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDN-EDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCC-CCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCC-HHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 35678999999999999999998753 5999998754322 22345677899999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++++|.+++...+ ..+++..+..++.|++.||+|||+. +++||||||+||+++ ++.+||+|||++.....
T Consensus 108 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDAK--IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp CBCCCSEEHHHHTTSSC--CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred eecccCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 99999999999998653 4588899999999999999999999 999999999999998 67999999999876532
Q ss_pred C-----CCCceeccccccccccccccc---------CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccc
Q 005864 560 G-----SSNWTEFAGTFGYVAPELAYT---------MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625 (673)
Q Consensus 560 ~-----~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 625 (673)
. ........|++.|+|||.+.. ..++.++||||||+++|||++|+.||......... ....
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-----~~~~ 256 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAII-----WQMG 256 (319)
T ss_dssp ------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHH-----HHHH
T ss_pred ccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-----HHhc
Confidence 1 122234568999999999864 45788999999999999999999999743221110 0000
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....+.... ...+.++.+++.+||+.||++|||+++++++|++
T Consensus 257 ~~~~~~~~~-----~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~ 299 (319)
T 2y4i_B 257 TGMKPNLSQ-----IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEK 299 (319)
T ss_dssp TTCCCCCCC-----SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTT
T ss_pred cCCCCCCCc-----CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 111111110 0122348899999999999999999999999864
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=328.59 Aligned_cols=254 Identities=22% Similarity=0.342 Sum_probs=187.2
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||+||+|+. .+|+.||+|++...... ....+.+.++...++.++||||+++++++.+++..++|
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CH-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCc-HHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 36789999999999999999976 47999999998764322 23344555666668888999999999999999999999
Q ss_pred EecccCCChHHHHhcC-CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 480 YECLERGSLAEILSND-GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|||+++ +|.+++... .....+++..+..++.|++.||+|||+++ +++||||||+||+++.++.+||+|||++....
T Consensus 85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 999985 888877542 12246899999999999999999999852 89999999999999999999999999998764
Q ss_pred CCCCCceeccccccccccccc----ccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC-CCC
Q 005864 559 PGSSNWTEFAGTFGYVAPELA----YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP-RLP 633 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 633 (673)
... ......|++.|+|||.+ .+..++.++||||+|+++|||++|+.||+..... .......... ...
T Consensus 162 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-------~~~~~~~~~~~~~~ 233 (290)
T 3fme_A 162 DDV-AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-------FQQLKQVVEEPSPQ 233 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-------HHHHHHHHHSCCCC
T ss_pred ccc-cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch-------HHHHHHHhccCCCC
Confidence 432 22335689999999996 5667899999999999999999999998732111 0011111111 111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+. ...+.++.+++.+||+.||++|||++|+++
T Consensus 234 ~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 234 LPA---DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CCT---TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ccc---ccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 111 122345889999999999999999999975
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=332.67 Aligned_cols=252 Identities=22% Similarity=0.303 Sum_probs=197.1
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeec--CCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSH--PRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~ 477 (673)
++|++.+.||+|+||+||+|.. .+|+.||||+++.. ..+.+.+|+.++++++ ||||+++++++.+ ....+
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 5789999999999999999976 57999999998643 2467889999999997 9999999999987 56789
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-ceEEecccceee
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-EARVSDFGIAKF 556 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~ 556 (673)
+||||+++++|.+++.. +++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++.
T Consensus 110 lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~ 180 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 180 (330)
T ss_dssp EEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceE
Confidence 99999999999999853 77888999999999999999999 999999999999999776 899999999987
Q ss_pred cCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccc--------------------
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSS-------------------- 615 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-------------------- 615 (673)
...... .....++..|+|||.+.+ ..++.++||||+||++|||++|+.||........
T Consensus 181 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 259 (330)
T 3nsz_A 181 YHPGQE-YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 259 (330)
T ss_dssp CCTTCC-CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred cCCCCc-cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHH
Confidence 754432 344678999999999877 6689999999999999999999999842111000
Q ss_pred cccccccccccccCCCCC------CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 616 SSSNMNLSLNEILDPRLP------LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..........+....... .........+.++.+++.+||+.||++|||++|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp TTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000000000000000 000111123456899999999999999999999986
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-39 Score=346.88 Aligned_cols=296 Identities=22% Similarity=0.213 Sum_probs=143.8
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS 81 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 81 (673)
|+|++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+++...+..|.++++|++|+|++|++..+.+
T Consensus 42 n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~ 121 (477)
T 2id5_A 42 NRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLD 121 (477)
T ss_dssp SCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECT
T ss_pred CccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCCh
Confidence 34444444444444444444444444444444444444444444444444443333344444444444444444444444
Q ss_pred cccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCC
Q 005864 82 EVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKS 161 (673)
Q Consensus 82 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~ 161 (673)
..|..+++|++|+|++|.+....+..|.++++|+.|+|++|.++...+..+..+++|+.|++++|.+.+..+..+..+++
T Consensus 122 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~ 201 (477)
T 2id5_A 122 YMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYR 201 (477)
T ss_dssp TTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTT
T ss_pred hHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcc
Confidence 44444444444444444444444444444444444444444444433334444444444444444444444444444444
Q ss_pred CCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecC
Q 005864 162 LNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241 (673)
Q Consensus 162 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~ 241 (673)
|+.|++++|.+.+.++.......+|+.|++++|.+++..+..+..+++|+.|+|++|.+++..+..|..+++|+.|+|++
T Consensus 202 L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 281 (477)
T 2id5_A 202 LKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVG 281 (477)
T ss_dssp CCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCS
T ss_pred cceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCC
Confidence 55555444444433333333333455555555555432223445555555555555555554444455555555555555
Q ss_pred CcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCC
Q 005864 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIP 297 (673)
Q Consensus 242 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~ 297 (673)
|.+.+..|..|..+++|+.|+|++|++++..+..|..+++|+.|++++|++.+.++
T Consensus 282 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 282 GQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp SCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGG
T ss_pred CccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccc
Confidence 55554445555555555555555555555544455555555555555555554443
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=338.90 Aligned_cols=256 Identities=20% Similarity=0.290 Sum_probs=182.4
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC------C
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP------R 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 474 (673)
++|++.+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+.+++.++||||+++++++... .
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 6799999999999999999975 479999999986543 2233467788999999999999999999998654 5
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++|+||+ +++|.+++.. ..+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a 179 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 179 (367)
T ss_dssp CCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC----
T ss_pred eEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccc
Confidence 679999998 6799998875 3488999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cccc---
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNLS--- 623 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~~--- 623 (673)
+.... ......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+..... ....
T Consensus 180 ~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~ 256 (367)
T 2fst_X 180 RHTAD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred ccccc---cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 86542 2344678999999999876 67899999999999999999999999754322110000 0000
Q ss_pred -----cccccCCCCCCCCcch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 -----LNEILDPRLPLPSRNI----QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 -----~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+..-...+.... ...+..+.+++.+||+.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 257 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 0000000000011111 112356889999999999999999999985
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-40 Score=344.37 Aligned_cols=257 Identities=21% Similarity=0.249 Sum_probs=192.9
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC------e
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR------H 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~ 475 (673)
.+|.+.+.||+|+||+||+|+...+..||+|++..... ...+|+++++.++||||+++++++...+ .
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 46889999999999999999988777799998864321 1236999999999999999999995433 3
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeC-CCCceEEecccce
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS-SEYEARVSDFGIA 554 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~~ 554 (673)
.++||||++++.+............+++..+..++.|+++||+|||+. +|+||||||+||+++ .++.+||+|||++
T Consensus 113 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a 189 (394)
T 4e7w_A 113 LNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSA 189 (394)
T ss_dssp EEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence 789999999854444332222224588999999999999999999999 999999999999999 7899999999999
Q ss_pred eecCCCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------c----c
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-------N----L 622 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-------~----~ 622 (673)
+....... .....+|+.|+|||.+.+. .++.++||||+||++|||++|+.||......+...... . .
T Consensus 190 ~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 190 KILIAGEP-NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp EECCTTCC-CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred ccccCCCC-CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 87754332 3446789999999998764 58999999999999999999999997543221100000 0 0
Q ss_pred ccccccCCCCCCC-Ccch-----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 623 SLNEILDPRLPLP-SRNI-----QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 623 ~~~~~~~~~~~~~-~~~~-----~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.........++.. ...+ ...+.++.+++.+||+.||++|||+.|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 0000111111110 0001 113456899999999999999999999985
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=346.96 Aligned_cols=256 Identities=18% Similarity=0.260 Sum_probs=201.4
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCC-CcccceeeeeecCCeeeE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH-RNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~l 478 (673)
.++|++.+.||+|+||.||+|.+ .+|+.||||++..... ...+.+|++++..++| +++..+..++...+..++
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 36799999999999999999976 5799999998764322 2357789999999976 556666667778888999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe---CCCCceEEeccccee
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL---SSEYEARVSDFGIAK 555 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~~~ 555 (673)
||||+ +++|.+++.... ..+++..++.|+.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++
T Consensus 81 vme~~-g~sL~~ll~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~ 154 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFCS--RKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154 (483)
T ss_dssp EEECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEECC-CCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcce
Confidence 99999 899999998643 4589999999999999999999999 99999999999999 578899999999999
Q ss_pred ecCCCCCC-------ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccccccc
Q 005864 556 FLKPGSSN-------WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEIL 628 (673)
Q Consensus 556 ~~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 628 (673)
.+...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ......+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~-----~~~~~~i~ 229 (483)
T 3sv0_A 155 KYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-----KQKYEKIS 229 (483)
T ss_dssp ECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH-----HHHHHHHH
T ss_pred eccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH-----HHHHHHHh
Confidence 87544321 1256799999999999999999999999999999999999999975322110 00001111
Q ss_pred CCCCCCCC-cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 629 DPRLPLPS-RNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 629 ~~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
........ ......+.++.+++..||+.||++||++++|++.|+
T Consensus 230 ~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~ 274 (483)
T 3sv0_A 230 EKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFR 274 (483)
T ss_dssp HHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHH
T ss_pred hccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 00000000 000122346899999999999999999999999886
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=333.11 Aligned_cols=263 Identities=20% Similarity=0.305 Sum_probs=199.4
Q ss_pred HhcCCCccceeccCCcEEEEEEEe--CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc---CCCcccceeeeee---
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGEL--PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI---RHRNIVKFYGFCS--- 471 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~--- 471 (673)
+.++|++.+.||+|+||+||+|+. .+|+.||+|++....... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc-cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 457899999999999999999987 468899999987543221 1123455677766666 8999999999987
Q ss_pred --cCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEe
Q 005864 472 --HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVS 549 (673)
Q Consensus 472 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 549 (673)
.....++||||++ |+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCT-TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhccc-CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 5567899999998 599999987542 3488999999999999999999999 99999999999999999999999
Q ss_pred cccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------ccc
Q 005864 550 DFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MNL 622 (673)
Q Consensus 550 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~~ 622 (673)
|||++...... .......+++.|+|||.+.+..++.++||||||+++|||++|+.||......+..... ...
T Consensus 163 Dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 163 DFGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 241 (326)
T ss_dssp SCCSCCCCCGG-GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGG
T ss_pred cCcccccccCC-CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcc
Confidence 99999765422 2234467899999999999989999999999999999999999999753321110000 000
Q ss_pred cc-------ccccCCC-CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 623 SL-------NEILDPR-LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 623 ~~-------~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+ ...+... ...........+..+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 0000000 00000111223456889999999999999999999985
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-39 Score=334.07 Aligned_cols=259 Identities=22% Similarity=0.309 Sum_probs=198.4
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-----C
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP-----R 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 474 (673)
.++|.+.+.||+|+||+||+|... +|+.||||++... ........+.+|+.++++++||||+++++++..+ .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc--ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 357889999999999999999775 6899999998643 2333466788999999999999999999998654 6
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a 159 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVISTQ----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLA 159 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccC-ccHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecccc
Confidence 7899999998 5999998763 488999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCC----------ceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc----
Q 005864 555 KFLKPGSSN----------WTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN---- 619 (673)
Q Consensus 555 ~~~~~~~~~----------~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~---- 619 (673)
......... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||............
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~ 239 (353)
T 2b9h_A 160 RIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGII 239 (353)
T ss_dssp EECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH
T ss_pred cccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence 876532211 123468999999998764 67899999999999999999999999754321100000
Q ss_pred ---c-c--------cccccccCCCCCCCCc----chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 620 ---M-N--------LSLNEILDPRLPLPSR----NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 620 ---~-~--------~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
. . ....+........+.. .....+.++.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 0 0000000000000000 01123456889999999999999999999986
|
| >3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=364.69 Aligned_cols=313 Identities=35% Similarity=0.558 Sum_probs=231.3
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCcc-ccCCCCCCEEEcccCccccccCccccCCC----------------
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGE-IGNLMQLTNLEIDNNQLFGQIPRSLRNLA---------------- 64 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~-~~~l~~L~~L~L~~n~i~~~~~~~l~~l~---------------- 64 (673)
|++++.+|..|+++++|++|+|++|.+++.+|.. |.++++|++|+|++|.+++.+|..+..++
T Consensus 304 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~ 383 (768)
T 3rgz_A 304 NHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGP 383 (768)
T ss_dssp SEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEE
T ss_pred CcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCC
Confidence 6677778888888888888888888877666655 77777777777777777766666555544
Q ss_pred -----------CCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhh
Q 005864 65 -----------SLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIG 133 (673)
Q Consensus 65 -----------~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 133 (673)
+|++|++++|++++..+..|..+++|++|+|++|.+++..+..+..+++|+.|++++|.+++..|..+.
T Consensus 384 ~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~ 463 (768)
T 3rgz_A 384 ILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELM 463 (768)
T ss_dssp CCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGG
T ss_pred cChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHc
Confidence 455555555555555666677777777777777777777777777777777777777777777777777
Q ss_pred ccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEE
Q 005864 134 KLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYL 213 (673)
Q Consensus 134 ~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 213 (673)
.+++|++|++++|++++..|..+..+++|++|+|++|++++.+|.++..+++|+.|++++|.+++.+|..+..+++|+.|
T Consensus 464 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 543 (768)
T 3rgz_A 464 YVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWL 543 (768)
T ss_dssp GCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEE
T ss_pred CCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEE
Confidence 77777777777777777777777777778888888887777777777777788888888888777777777778888888
Q ss_pred EccCCcCccCCchhhh----------------------------------------------------------------
Q 005864 214 NLSNNQFRKEFPVELE---------------------------------------------------------------- 229 (673)
Q Consensus 214 ~l~~n~l~~~~~~~~~---------------------------------------------------------------- 229 (673)
++++|++++.+|..+.
T Consensus 544 ~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~ 623 (768)
T 3rgz_A 544 DLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGH 623 (768)
T ss_dssp ECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEE
T ss_pred ECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceeccc
Confidence 8888877765554332
Q ss_pred ------cccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCcc-c
Q 005864 230 ------KLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTG-F 302 (673)
Q Consensus 230 ------~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~-~ 302 (673)
.+++|+.|+|++|++++.+|..++.+++|+.|+|++|++++.+|..+..+++|+.|||++|+++|.+|.... .
T Consensus 624 ~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l 703 (768)
T 3rgz_A 624 TSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 703 (768)
T ss_dssp CCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGC
T ss_pred CchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCC
Confidence 245677888888888888888888888888888888888888888888888888888888888888876432 3
Q ss_pred ccCccccccCCc
Q 005864 303 QYDPIQALRGNR 314 (673)
Q Consensus 303 ~~~~~~~~~~n~ 314 (673)
.......+..|+
T Consensus 704 ~~L~~L~ls~N~ 715 (768)
T 3rgz_A 704 TMLTEIDLSNNN 715 (768)
T ss_dssp CCCSEEECCSSE
T ss_pred CCCCEEECcCCc
Confidence 334444555543
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-40 Score=344.23 Aligned_cols=259 Identities=21% Similarity=0.225 Sum_probs=194.0
Q ss_pred HHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC----
Q 005864 399 RATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP---- 473 (673)
Q Consensus 399 ~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---- 473 (673)
...++|++.+.||+|+||+||+|.. .+|+.||||++..... ...+|+++++.++||||+++++++...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-------hHHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 4557899999999999999999976 5799999999865421 223699999999999999999998442
Q ss_pred ----------------------------------CeeeEEEecccCCChHHHHhcC-CCCccchHHHHHHHHHHHHHHHH
Q 005864 474 ----------------------------------RHSFLVYECLERGSLAEILSND-GSIKEFSWIVRTNVIKSVANALS 518 (673)
Q Consensus 474 ----------------------------------~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~ 518 (673)
...++||||+++ +|.+.+... .....+++..+..++.|+++||+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 347899999995 888777542 12245899999999999999999
Q ss_pred HHhhcCCCCeEEecCCCCCeEeC-CCCceEEecccceeecCCCCCCceecccccccccccccccC-CcCcchhHHHHHHH
Q 005864 519 YMHHDCFPPIVHRDISSKNVLLS-SEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVL 596 (673)
Q Consensus 519 ~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~i 596 (673)
|||+. +|+||||||+||+++ .++.+||+|||+++...... ......+|+.|+|||.+.+. .++.++||||+||+
T Consensus 156 ~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 156 FIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE-PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 99999 999999999999997 68899999999998775433 23445789999999998765 48999999999999
Q ss_pred HHHHHhCCCCCccccccccccccc-------c-------cccccccCCCCCCCC---cchHHHHHHHHHHHHHcccCCCC
Q 005864 597 ALEVIKGKHPRDFISLLSSSSSNM-------N-------LSLNEILDPRLPLPS---RNIQDKLISILEVALLCLEESPE 659 (673)
Q Consensus 597 l~el~~g~~p~~~~~~~~~~~~~~-------~-------~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dp~ 659 (673)
+|||++|+.||......+...... . ....+...+...... ......+.++.+++.+||+.||+
T Consensus 232 l~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 232 FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 999999999997543221110000 0 000000011111000 00011234589999999999999
Q ss_pred CCCCHHHHHH
Q 005864 660 SRPTMQTVCQ 669 (673)
Q Consensus 660 ~Rps~~~v~~ 669 (673)
+|||+.|+++
T Consensus 312 ~R~t~~e~l~ 321 (383)
T 3eb0_A 312 LRINPYEAMA 321 (383)
T ss_dssp GSCCHHHHHT
T ss_pred hCCCHHHHhc
Confidence 9999999984
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-39 Score=328.85 Aligned_cols=250 Identities=23% Similarity=0.356 Sum_probs=196.7
Q ss_pred HhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC--CCcccceeeeeecCCeee
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR--HRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~ 477 (673)
..++|++.+.||+|+||.||+|...+|+.||||++..... .....+.+.+|+.++.+++ ||||+++++++..++..+
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 104 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccc-cccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence 3567999999999999999999998899999999865432 2335678999999999997 599999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||| +.+++|.+++...+ .+++..+..++.|+++||+|||+. +|+||||||+||++++ +.+||+|||++...
T Consensus 105 lv~e-~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKKKK---SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQM 176 (313)
T ss_dssp EEEC-CCSEEHHHHHHHCS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC-
T ss_pred EEEe-cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccc
Confidence 9999 66789999998753 578899999999999999999999 9999999999999974 79999999999876
Q ss_pred CCCCC--Cceeccccccccccccccc-----------CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccccccc
Q 005864 558 KPGSS--NWTEFAGTFGYVAPELAYT-----------MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSL 624 (673)
Q Consensus 558 ~~~~~--~~~~~~~~~~y~aPE~~~~-----------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 624 (673)
..... ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||...... ....
T Consensus 177 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-------~~~~ 249 (313)
T 3cek_A 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ-------ISKL 249 (313)
T ss_dssp -------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH-------HHHH
T ss_pred cCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH-------HHHH
Confidence 44322 1234568999999999865 46888999999999999999999998632110 0111
Q ss_pred ccccCCCC--CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 625 NEILDPRL--PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 625 ~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....++.. ..+... +.++.+++.+||+.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 250 HAIIDPNHEIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp HHHHCTTSCCCCCCCS----CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHhcccccCCcccc----hHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 12222221 111111 245889999999999999999999985
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-39 Score=359.48 Aligned_cols=253 Identities=24% Similarity=0.397 Sum_probs=202.0
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC----CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH 475 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 475 (673)
..++|++.+.||+|+||+||+|.+. .+..||+|.++.. ......+.+.+|+.++++++||||+++++++. ++.
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~ 464 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENP 464 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST--TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSS
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCc
Confidence 3467888999999999999999764 2567999988654 23344678999999999999999999999985 456
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccccee
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 555 (673)
.++||||+++|+|.+++...+ ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVRK--FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHTT--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred eEEEEEcCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCe
Confidence 899999999999999998653 3588999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCC-CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccC-CCC
Q 005864 556 FLKPGSS-NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILD-PRL 632 (673)
Q Consensus 556 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ 632 (673)
....... ......+++.|+|||.+.+..++.++||||||+++|||++ |..||......+. ...+.. ...
T Consensus 540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~--------~~~i~~~~~~ 611 (656)
T 2j0j_A 540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV--------IGRIENGERL 611 (656)
T ss_dssp SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--------HHHHHHTCCC
T ss_pred ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHH--------HHHHHcCCCC
Confidence 7644322 1233456789999999998899999999999999999997 9999874322111 111111 112
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+.+. ..+..+.+++.+||+.||++|||+.|+++.|+
T Consensus 612 ~~~~----~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~ 647 (656)
T 2j0j_A 612 PMPP----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647 (656)
T ss_dssp CCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCc----cccHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 2222 22345889999999999999999999999886
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=337.57 Aligned_cols=255 Identities=22% Similarity=0.320 Sum_probs=195.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee----
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS---- 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~---- 476 (673)
++|.+.+.||+|+||+||+|... +|+.||||++..... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ-SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEeccccc-chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 57889999999999999999764 699999999876432 234467889999999999999999999999876654
Q ss_pred --eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 477 --FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 477 --~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
++||||++ ++|.+++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a 191 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 191 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC
T ss_pred eEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcc
Confidence 99999998 588888743 388999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------cccc--
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-------NLSL-- 624 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-------~~~~-- 624 (673)
+..... .....||+.|+|||.+.+ ..++.++||||+||++|||++|+.||......+...... ....
T Consensus 192 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 192 RHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred cccccC---cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHH
Confidence 865432 344678999999999877 678999999999999999999999997543221100000 0000
Q ss_pred ------ccccCCCCCCCCcch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 625 ------NEILDPRLPLPSRNI----QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 625 ------~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..........+.... ...+.++.+++.+||+.||++|||++|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 000000000000111 122456899999999999999999999985
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-39 Score=337.65 Aligned_cols=266 Identities=21% Similarity=0.238 Sum_probs=187.8
Q ss_pred HHHHHHhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC
Q 005864 395 EEIIRATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP 473 (673)
Q Consensus 395 ~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 473 (673)
++.....++|++.+.||+|+||+||+|... +|+.||||++..... ....+.+++..+..++||||+++++++...
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~~l~~l~h~niv~~~~~~~~~ 91 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR----FRNRELQIMQDLAVLHHPNIVQLQSYFYTL 91 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT----CCCHHHHHHHHHHHHCCTTBCCEEEEEEEE
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc----ccHHHHHHHHHHHhcCCCCcccHHHhhhcc
Confidence 455667789999999999999999999774 699999998855322 234566788888999999999999999653
Q ss_pred Ce-------eeEEEecccCCChHHHHhc-CCCCccchHHHHHHHHHHHHHHHHHHh--hcCCCCeEEecCCCCCeEeCC-
Q 005864 474 RH-------SFLVYECLERGSLAEILSN-DGSIKEFSWIVRTNVIKSVANALSYMH--HDCFPPIVHRDISSKNVLLSS- 542 (673)
Q Consensus 474 ~~-------~~lv~e~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~i~~~l~~LH--~~~~~~ivH~dlk~~Nill~~- 542 (673)
+. .++||||+++ +|.+.+.. ......+++..+..++.|++.|+.||| +. +|+||||||+||+++.
T Consensus 92 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~ 167 (360)
T 3e3p_A 92 GERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEA 167 (360)
T ss_dssp CSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETT
T ss_pred ccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCC
Confidence 33 7899999987 55544432 222356888999999999999999999 87 9999999999999997
Q ss_pred CCceEEecccceeecCCCCCCceecccccccccccccccCC-cCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-
Q 005864 543 EYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM- 620 (673)
Q Consensus 543 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~- 620 (673)
++.+||+|||++....... ......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.............
T Consensus 168 ~~~~kl~Dfg~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~ 246 (360)
T 3e3p_A 168 DGTLKLCDFGSAKKLSPSE-PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVR 246 (360)
T ss_dssp TTEEEECCCTTCBCCCTTS-CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred CCcEEEeeCCCceecCCCC-CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHH
Confidence 8999999999998765433 234467899999999986554 8999999999999999999999997533211100000
Q ss_pred ------ccccc---------cccCC-CCCC---CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 ------NLSLN---------EILDP-RLPL---PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 ------~~~~~---------~~~~~-~~~~---~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+. ...+. ..+. ........+.++.+++.+||+.||.+|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 247 VLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000 00000 0000 00000113457999999999999999999999975
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-39 Score=339.46 Aligned_cols=257 Identities=21% Similarity=0.284 Sum_probs=198.7
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC--------CCcccceeeeee-
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR--------HRNIVKFYGFCS- 471 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~- 471 (673)
++|++.+.||+|+||+||+|+. .+|+.||||++... ....+.+.+|+.+++.++ ||||+++++++.
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 6799999999999999999976 46889999998643 234567889999999996 788999999987
Q ss_pred ---cCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC----
Q 005864 472 ---HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY---- 544 (673)
Q Consensus 472 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---- 544 (673)
.....++||||+ ++++.+++.... ...+++..+..++.||+.||+|||+++ +|+||||||+||+++.++
T Consensus 113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~ 188 (397)
T 1wak_A 113 SGVNGTHICMVFEVL-GHHLLKWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIR 188 (397)
T ss_dssp EETTEEEEEEEECCC-CCBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHH
T ss_pred cCCCCceEEEEEecc-CccHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhh
Confidence 556789999999 556766665542 245899999999999999999999963 899999999999999775
Q ss_pred ---------------------------------------------ceEEecccceeecCCCCCCceeccccccccccccc
Q 005864 545 ---------------------------------------------EARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELA 579 (673)
Q Consensus 545 ---------------------------------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~ 579 (673)
.+||+|||++...... .....||+.|+|||++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~---~~~~~gt~~y~aPE~~ 265 (397)
T 1wak_A 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH---FTEDIQTRQYRSLEVL 265 (397)
T ss_dssp HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---SCSCCSCGGGCCHHHH
T ss_pred hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---CccCCCCCcccCChhh
Confidence 7999999999876432 3445789999999999
Q ss_pred ccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------------cc------cccccccCCC-----CC--
Q 005864 580 YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------------MN------LSLNEILDPR-----LP-- 633 (673)
Q Consensus 580 ~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------------~~------~~~~~~~~~~-----~~-- 633 (673)
.+..++.++|||||||++|||++|+.||......+..... .. ....+.+... ..
T Consensus 266 ~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (397)
T 1wak_A 266 IGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKL 345 (397)
T ss_dssp HTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCC
T ss_pred cCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccccc
Confidence 9999999999999999999999999999743221100000 00 0000000000 00
Q ss_pred C----------CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 L----------PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~----------~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
. ........+..+.+++.+||+.||++|||++|+++
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 346 KPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0 00123456678999999999999999999999985
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-39 Score=330.46 Aligned_cols=256 Identities=19% Similarity=0.281 Sum_probs=200.5
Q ss_pred cCCCccceeccCCcEEEEEEEe--CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCc------ccceeeeeecC
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL--PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN------IVKFYGFCSHP 473 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~ 473 (673)
++|++.+.||+|+||+||+|.. .+|+.||||+++.. ....+.+.+|+.++..++|++ ++++++++...
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~ 89 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH 89 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC
Confidence 5789999999999999999976 36889999998643 223567888999999987664 99999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-----------
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS----------- 542 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~----------- 542 (673)
+..++||||+ +++|.+++...+. ..+++..+..++.|+++||+|||++ +|+||||||+||+++.
T Consensus 90 ~~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 90 GHICIVFELL-GLSTYDFIKENGF-LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC---
T ss_pred CcEEEEEcCC-CCCHHHHHHhcCC-CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcc
Confidence 9999999999 8899999987642 4588999999999999999999999 9999999999999987
Q ss_pred --------CCceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccc
Q 005864 543 --------EYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLS 614 (673)
Q Consensus 543 --------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~ 614 (673)
++.+||+|||++...... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||......+
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 241 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDEH---HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE 241 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTSC---CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH
T ss_pred ccccccccCCCceEeeCcccccCccc---cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence 668999999999875432 234578999999999999999999999999999999999999997432211
Q ss_pred ccccc-------ccccc-----cccc-CCCCCC-------------------CCcchHHHHHHHHHHHHHcccCCCCCCC
Q 005864 615 SSSSN-------MNLSL-----NEIL-DPRLPL-------------------PSRNIQDKLISILEVALLCLEESPESRP 662 (673)
Q Consensus 615 ~~~~~-------~~~~~-----~~~~-~~~~~~-------------------~~~~~~~~~~~l~~li~~cl~~dp~~Rp 662 (673)
..... ..... .... ...... ........+.++.+++.+||+.||.+||
T Consensus 242 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 321 (339)
T 1z57_A 242 HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRI 321 (339)
T ss_dssp HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccccc
Confidence 00000 00000 0000 000000 0001123456799999999999999999
Q ss_pred CHHHHHH
Q 005864 663 TMQTVCQ 669 (673)
Q Consensus 663 s~~~v~~ 669 (673)
|++|+++
T Consensus 322 t~~ell~ 328 (339)
T 1z57_A 322 TLREALK 328 (339)
T ss_dssp CHHHHTT
T ss_pred CHHHHhc
Confidence 9999975
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=330.68 Aligned_cols=257 Identities=21% Similarity=0.307 Sum_probs=191.3
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeee---------
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS--------- 471 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--------- 471 (673)
++|.+.+.||+|+||.||+|... +|+.||+|++... .....+.+.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 87 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDD 87 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC-
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccc
Confidence 57889999999999999999876 5899999998653 2345678899999999999999999999873
Q ss_pred -----cCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeC-CCCc
Q 005864 472 -----HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS-SEYE 545 (673)
Q Consensus 472 -----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~ 545 (673)
+....++||||++ |+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+++ +++.
T Consensus 88 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 159 (320)
T 2i6l_A 88 VGSLTELNSVYIVQEYME-TDLANVLEQG----PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLV 159 (320)
T ss_dssp ---CCSCSEEEEEEECCS-EEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTE
T ss_pred cccccccCceeEEeeccC-CCHHHHhhcC----CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCe
Confidence 3467899999998 5999999653 478899999999999999999999 999999999999997 5679
Q ss_pred eEEecccceeecCCCC---CCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-
Q 005864 546 ARVSDFGIAKFLKPGS---SNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM- 620 (673)
Q Consensus 546 ~kl~Dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~- 620 (673)
+||+|||++....... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+......
T Consensus 160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 239 (320)
T 2i6l_A 160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILE 239 (320)
T ss_dssp EEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred EEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 9999999998764322 12234567899999998765 678999999999999999999999997543221100000
Q ss_pred ------ccccccc-------cCCCCCCCCc----chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 ------NLSLNEI-------LDPRLPLPSR----NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 ------~~~~~~~-------~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+. .......+.. .....+.++.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 240 SIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 0000000 0000000000 01123456899999999999999999999985
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-39 Score=352.03 Aligned_cols=261 Identities=26% Similarity=0.309 Sum_probs=202.5
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec------C
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH------P 473 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~ 473 (673)
.++|++.+.||+|+||+||+|.+. +|+.||||++.... .....+.+.+|++++.+++||||+++++++.. .
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~--~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL--SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC--CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC--CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 368999999999999999999764 69999999987542 23446789999999999999999999999765 6
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCc---eEEec
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYE---ARVSD 550 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~D 550 (673)
+..++||||+++|+|.+++........+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcc
Confidence 77899999999999999998866555688999999999999999999999 9999999999999997765 99999
Q ss_pred ccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc------cccccc
Q 005864 551 FGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS------NMNLSL 624 (673)
Q Consensus 551 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~------~~~~~~ 624 (673)
||++....... ......|++.|+|||.+.+..++.++||||+|+++|||++|+.||........... ......
T Consensus 168 FG~a~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~ 246 (676)
T 3qa8_A 168 LGYAKELDQGE-LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVV 246 (676)
T ss_dssp CCCCCBTTSCC-CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCS
T ss_pred ccccccccccc-ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhh
Confidence 99998765432 23456789999999999999999999999999999999999999864211100000 000001
Q ss_pred cc------ccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHH
Q 005864 625 NE------ILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTV 667 (673)
Q Consensus 625 ~~------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v 667 (673)
.+ .+....+.+.......+..+.+++.+||+.||++|||++|+
T Consensus 247 ~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 247 YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 11 11122233333444566789999999999999999999774
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-39 Score=329.61 Aligned_cols=255 Identities=23% Similarity=0.321 Sum_probs=178.2
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHH-HHhccCCCcccceeeeeecCCeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIK-ALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
++|++.+.||+|+||.||+|... +|+.||||++..... .....++..|+. +++.++||||+++++++..++..++|
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD--EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC--HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC--chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 57888999999999999999774 799999999876432 223445555665 77778999999999999999999999
Q ss_pred EecccCCChHHHHhcC--CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 480 YECLERGSLAEILSND--GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
|||+++ +|.+++... .....+++..+..++.|++.||.|||+.. +++||||||+||+++.++.+||+|||++...
T Consensus 100 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 100 MELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp ECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred EeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 999986 888877631 11245889999999999999999999952 8999999999999999999999999999866
Q ss_pred CCCCCCceeccccccccccccc----ccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 558 KPGSSNWTEFAGTFGYVAPELA----YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~----~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
.... ......|++.|+|||.+ .+..++.++||||||+++|||++|+.||....... .....+.....+
T Consensus 177 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-------~~~~~~~~~~~~ 248 (327)
T 3aln_A 177 VDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-------DQLTQVVKGDPP 248 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCCCSCCC
T ss_pred cccc-ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-------HHHHHHhcCCCC
Confidence 4322 22334689999999998 45678999999999999999999999987432110 111111111111
Q ss_pred -CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 -LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 -~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.......+..+.+++.+||+.||++|||+.|+++
T Consensus 249 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 249 QLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 111111123446899999999999999999999975
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-39 Score=340.79 Aligned_cols=249 Identities=25% Similarity=0.360 Sum_probs=186.8
Q ss_pred CCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEEe
Q 005864 403 NFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 481 (673)
.|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.++.++ +|||||++++++.+++..++|||
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E 89 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE 89 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence 34456889999999998876678999999998643 234577899999887 89999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCcc----chHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-------------C
Q 005864 482 CLERGSLAEILSNDGSIKE----FSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-------------Y 544 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~----l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-------------~ 544 (673)
|++ |+|.+++........ .++..+..++.||+.||+|||+. +|+||||||+||+++.+ +
T Consensus 90 ~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~ 165 (434)
T 2rio_A 90 LCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENL 165 (434)
T ss_dssp CCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSC
T ss_pred cCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCce
Confidence 996 599999987542111 13334578999999999999999 99999999999999754 4
Q ss_pred ceEEecccceeecCCCCCC----ceeccccccccccccccc-------CCcCcchhHHHHHHHHHHHHh-CCCCCccccc
Q 005864 545 EARVSDFGIAKFLKPGSSN----WTEFAGTFGYVAPELAYT-------MKVTEKCDVYSFGVLALEVIK-GKHPRDFISL 612 (673)
Q Consensus 545 ~~kl~Dfg~~~~~~~~~~~----~~~~~~~~~y~aPE~~~~-------~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~ 612 (673)
.+||+|||++......... .....||+.|+|||++.+ ..++.++|||||||++|||++ |+.||+....
T Consensus 166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~ 245 (434)
T 2rio_A 166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245 (434)
T ss_dssp EEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT
T ss_pred EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh
Confidence 8999999999987554322 234579999999999865 668999999999999999999 9999863221
Q ss_pred ccccccccccccccccC-CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 613 LSSSSSNMNLSLNEILD-PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 613 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
... ........ +.. ........+.++.+++.+||+.||++|||+.|+++
T Consensus 246 ~~~------~i~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 246 RES------NIIRGIFSLDEM--KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHH------HHHHTCCCCCCC--TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hHH------HHhcCCCCcccc--cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 110 00000000 011 11123456678999999999999999999999985
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=345.05 Aligned_cols=199 Identities=20% Similarity=0.351 Sum_probs=154.4
Q ss_pred cCCCc-cceeccCCcEEEEEEEeC---CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeee--cCCe
Q 005864 402 KNFDA-EQCIGIGGQASVYRGELP---SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS--HPRH 475 (673)
Q Consensus 402 ~~~~~-~~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~ 475 (673)
+.|++ .+.||+|+||+||+|+.. +++.||||++..... ...+.+|+.++++++||||+++++++. .+..
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 34555 558999999999999865 578999999865422 246778999999999999999999995 4678
Q ss_pred eeEEEecccCCChHHHHhcCC------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe----CCCCc
Q 005864 476 SFLVYECLERGSLAEILSNDG------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL----SSEYE 545 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~ 545 (673)
.++||||+++ +|.+++.... ....+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.
T Consensus 95 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 95 VWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCc
Confidence 8999999975 8888875321 122489999999999999999999999 99999999999999 67789
Q ss_pred eEEecccceeecCCCC---CCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcc
Q 005864 546 ARVSDFGIAKFLKPGS---SNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDF 609 (673)
Q Consensus 546 ~kl~Dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~ 609 (673)
+||+|||+++...... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||..
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 9999999998765332 223446789999999998874 589999999999999999999999964
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=343.65 Aligned_cols=254 Identities=24% Similarity=0.301 Sum_probs=191.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC------C
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP------R 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 474 (673)
.+|++.+.||+|+||.||+|++. +|+.||||++.... +...+|+++++.++|||||++++++... .
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~ 126 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcce
Confidence 35888999999999999999875 69999999986532 1234699999999999999999998532 2
Q ss_pred eeeEEEecccCCChHHHHhcC-CCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-CceEEeccc
Q 005864 475 HSFLVYECLERGSLAEILSND-GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFG 552 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg 552 (673)
..++||||+++ ++.+.+... .....+++..+..++.||++||+|||+. +|+||||||+||+++.+ +.+||+|||
T Consensus 127 ~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 127 YLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred eEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccch
Confidence 35799999987 666665431 1224689999999999999999999999 99999999999999965 578999999
Q ss_pred ceeecCCCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------cc--
Q 005864 553 IAKFLKPGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-------NL-- 622 (673)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-------~~-- 622 (673)
+++.+..... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+...... ..
T Consensus 203 ~a~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 203 SAKQLVRGEP-NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp TCEECCTTCC-CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred hhhhcccCCC-ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 9987654332 3346789999999998764 78999999999999999999999997543221110000 00
Q ss_pred -----ccccccCCCCCCCCcchH-----HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 623 -----SLNEILDPRLPLPSRNIQ-----DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 623 -----~~~~~~~~~~~~~~~~~~-----~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+...+... ...+. ..+.++.+++.+||+.||++|||+.|+++
T Consensus 282 ~~~~~~~~~~~~p~~~--~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIK--AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHCSCCCCCCCCCCC--CCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhhChhhhhhccCccC--CCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 00011111111 01111 12456899999999999999999999975
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-39 Score=327.31 Aligned_cols=247 Identities=22% Similarity=0.330 Sum_probs=192.9
Q ss_pred HHHHhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhh---HHHHHHHHHHHHHhcc----CCCcccceee
Q 005864 397 IIRATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEI---SVQREFLNEIKALTEI----RHRNIVKFYG 468 (673)
Q Consensus 397 ~~~~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l----~h~niv~l~~ 468 (673)
.....++|++.+.||+|+||.||+|.. .+|+.||||++........ .....+.+|+.++.++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 344567899999999999999999976 4689999999865432211 1234466799999988 8999999999
Q ss_pred eeecCCeeeEEEec-ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeC-CCCce
Q 005864 469 FCSHPRHSFLVYEC-LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS-SEYEA 546 (673)
Q Consensus 469 ~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~ 546 (673)
++...+..++|+|| +.+++|.+++...+ .+++..+..++.|+++||+|||+. +|+||||||+||+++ .++.+
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEKG---PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence 99999999999999 78999999998753 488999999999999999999999 999999999999999 88999
Q ss_pred EEecccceeecCCCCCCceecccccccccccccccCCcC-cchhHHHHHHHHHHHHhCCCCCcccccccccccccccccc
Q 005864 547 RVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVT-EKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLN 625 (673)
Q Consensus 547 kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 625 (673)
||+|||++...... ......|+..|+|||++.+..+. .++||||+|+++|||++|+.||......
T Consensus 180 kl~dfg~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------------ 245 (312)
T 2iwi_A 180 KLIDFGSGALLHDE--PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEI------------ 245 (312)
T ss_dssp EECCCSSCEECCSS--CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH------------
T ss_pred EEEEcchhhhcccC--cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHH------------
Confidence 99999999876543 23456689999999998876664 5899999999999999999998743211
Q ss_pred cccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 626 EILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.......+.. .+..+.+++.+||+.||++|||++|+++
T Consensus 246 --~~~~~~~~~~----~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 246 --LEAELHFPAH----VSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp --HHTCCCCCTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred --hhhccCCccc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111222211 2345889999999999999999999986
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=339.25 Aligned_cols=318 Identities=21% Similarity=0.219 Sum_probs=178.2
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccc-cCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLS-GSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI 80 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~ 80 (673)
|+|++..|..|+++++|++|+|++|.+. .+.+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..
T Consensus 40 n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 119 (455)
T 3v47_A 40 NSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAV 119 (455)
T ss_dssp SCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHH
T ss_pred CccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccc
Confidence 5566666666666666666666666665 233455666666666666666666555666666666666666666666532
Q ss_pred c--cccCCCCCccEEEccCCccccccccC-ccccCCCcEEEcccCccCccCChhhhcc--ccccccccccccccccCCcc
Q 005864 81 S--EVFGIYPNLTFLDISHNNFYGEIWSS-WGKCQQLGTLNFSMNNITGSIPPEIGKL--YQLHKLDFSLNQIVGEIPIE 155 (673)
Q Consensus 81 ~--~~~~~l~~L~~L~L~~n~i~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~l~~l--~~L~~L~l~~n~i~~~~~~~ 155 (673)
+ ..|..+++|++|+|++|.+++..+.. +.++++|++|++++|.+++..+..+..+ .+|+.|++++|.+.+..+..
T Consensus 120 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~ 199 (455)
T 3v47_A 120 LSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYW 199 (455)
T ss_dssp HHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTC
T ss_pred cCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhh
Confidence 2 23666666666666666666554444 5666666666666666666555555444 22333333333332211111
Q ss_pred --------ccCCCCCCEEEccCccccccCCcccc---------------------------------------CCCCCCE
Q 005864 156 --------LGNLKSLNYLVLNGNKLSGNLPRVLG---------------------------------------SLSELEY 188 (673)
Q Consensus 156 --------l~~l~~L~~L~L~~n~l~~~~~~~l~---------------------------------------~l~~L~~ 188 (673)
+..+++|++|++++|++++..+..+. ..++|+.
T Consensus 200 ~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 279 (455)
T 3v47_A 200 LGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKT 279 (455)
T ss_dssp TTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCE
T ss_pred ccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceE
Confidence 11234555555555555432222111 1135666
Q ss_pred EEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccc
Q 005864 189 LDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNL 268 (673)
Q Consensus 189 L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l 268 (673)
|++++|.+++..|..+..+++|+.|++++|++++..|..|..+++|+.|++++|.+++..+..|..+++|++|+|++|++
T Consensus 280 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 359 (455)
T 3v47_A 280 CDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHI 359 (455)
T ss_dssp EECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCC
T ss_pred EEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcc
Confidence 66666666555555566666666666666666655555566666666666666666555555556666666666666666
Q ss_pred cccCccccccCCCccEEEccCccccCCCCCC-cccccCccccccCCcCCCCC
Q 005864 269 SGLIPSCFEGMHGLSCIDISYNELLGLIPNS-TGFQYDPIQALRGNRGLCGD 319 (673)
Q Consensus 269 ~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~ 319 (673)
++..|..|..+++|++|++++|++++.++.. ..........+.+|+..|..
T Consensus 360 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 411 (455)
T 3v47_A 360 RALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 411 (455)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred cccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCC
Confidence 6555555666666666666666666554443 23334444555566555543
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-39 Score=330.60 Aligned_cols=244 Identities=22% Similarity=0.350 Sum_probs=199.8
Q ss_pred HhcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhh---HHHHHHHHHHHHHhccC--CCcccceeeeeecC
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEI---SVQREFLNEIKALTEIR--HRNIVKFYGFCSHP 473 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~ 473 (673)
..++|++.+.||+|+||+||+|.. .+|+.||||++........ ...+.+.+|+.++.+++ ||||+++++++..+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 356799999999999999999975 4789999999876432211 12345678999999996 59999999999999
Q ss_pred CeeeEEEecccC-CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeC-CCCceEEecc
Q 005864 474 RHSFLVYECLER-GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS-SEYEARVSDF 551 (673)
Q Consensus 474 ~~~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Df 551 (673)
+..++|+|++.+ ++|.+++... ..+++..+..++.|+++||+|||+. +|+||||||+||+++ +++.+||+||
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCC
T ss_pred CcEEEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 999999999986 8999999865 3478899999999999999999999 999999999999999 7789999999
Q ss_pred cceeecCCCCCCceecccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP 630 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 630 (673)
|++...... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||....... ..
T Consensus 195 g~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--------------~~ 258 (320)
T 3a99_A 195 GSGALLKDT--VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII--------------RG 258 (320)
T ss_dssp TTCEECCSS--CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHH--------------HC
T ss_pred ccccccccc--cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhh--------------cc
Confidence 999876532 2344678999999999887665 678999999999999999999987432111 11
Q ss_pred CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 631 RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 631 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.. .+.++.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 259 QVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp CCCCSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ccccccc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1111111 2235889999999999999999999986
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-39 Score=332.65 Aligned_cols=255 Identities=21% Similarity=0.292 Sum_probs=195.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe-----
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH----- 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 475 (673)
++|.+.+.||+|+||+||+|... +|+.||||++.... ......+.+.+|+.+++.++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 56888999999999999999764 69999999987643 223346788999999999999999999999987654
Q ss_pred -eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 476 -SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 476 -~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
.++||||++ |+|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 173 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 173 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred eEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccc
Confidence 499999998 488887743 388999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------cccc--
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-------NLSL-- 624 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-------~~~~-- 624 (673)
...... .....+|+.|+|||.+.+ ..++.++||||+|+++|||++|+.||......+...... ....
T Consensus 174 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 174 RHADAE---MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp TC-----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTT
T ss_pred cCCCCC---ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 765322 334578999999999876 678999999999999999999999997543221100000 0000
Q ss_pred ----------ccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 625 ----------NEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 625 ----------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...-..............+.++.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000000000000111233456899999999999999999999985
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=337.92 Aligned_cols=246 Identities=23% Similarity=0.339 Sum_probs=185.9
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+|+..+.||+|+||+||.....+|+.||||++..... ..+.+|+.+++++ +|||||++++++.+.+..++||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~ 97 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAI 97 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEE
Confidence 46888899999999997766666899999999865322 2345799999999 7999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-----CCceEEeccccee
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-----EYEARVSDFGIAK 555 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-----~~~~kl~Dfg~~~ 555 (673)
||++ |+|.+++.... ....+..+..++.||+.||+|||+. +|+||||||+||+++. ...+||+|||+++
T Consensus 98 E~~~-g~L~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~ 171 (432)
T 3p23_A 98 ELCA-ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171 (432)
T ss_dssp ECCS-EEHHHHHHSSS--CCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEE
T ss_pred ECCC-CCHHHHHHhcC--CCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEeccccee
Confidence 9997 49999998754 2234445678999999999999999 9999999999999953 2358899999998
Q ss_pred ecCCCC---CCceecccccccccccccc---cCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccccccc
Q 005864 556 FLKPGS---SNWTEFAGTFGYVAPELAY---TMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEIL 628 (673)
Q Consensus 556 ~~~~~~---~~~~~~~~~~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~ 628 (673)
...... .......||+.|+|||++. ...++.++||||+||++|||++ |..||....... .....
T Consensus 172 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~---------~~~~~ 242 (432)
T 3p23_A 172 KLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ---------ANILL 242 (432)
T ss_dssp CC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH---------HHHHT
T ss_pred eccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH---------HHHHh
Confidence 765432 2234467999999999987 4567889999999999999999 999986321110 00000
Q ss_pred CC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 629 DP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 629 ~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.. .... ..........+.+++.+||+.||++|||++|+++
T Consensus 243 ~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 243 GACSLDC-LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TCCCCTT-SCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccCCccc-cCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 00 0110 0111234456889999999999999999999984
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=332.05 Aligned_cols=257 Identities=21% Similarity=0.282 Sum_probs=196.8
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-----------CCcccceeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-----------HRNIVKFYGF 469 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~ 469 (673)
++|.+.+.||+|+||+||+|.. .+|+.||||++.... ...+.+.+|+.++.+++ ||||++++++
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc----cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 5789999999999999999976 478999999987432 23566788999999886 8999999999
Q ss_pred eecCC----eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeC----
Q 005864 470 CSHPR----HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS---- 541 (673)
Q Consensus 470 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~---- 541 (673)
+...+ ..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||+++ +|+||||||+||+++
T Consensus 95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVFEVL-GENLLALIKKYEH-RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EEEEETTEEEEEEEECCC-CEEHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEET
T ss_pred hhccCCCCceEEEEEecC-CCCHHHHHHHhhc-cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCC
Confidence 97644 789999999 8899999987542 34889999999999999999999953 899999999999994
Q ss_pred --CCCceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc
Q 005864 542 --SEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN 619 (673)
Q Consensus 542 --~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~ 619 (673)
..+.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||............
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEH---YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBC---CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CcCcceEEEcccccccccCCC---CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 4457999999999876432 23457899999999999999999999999999999999999999743211000000
Q ss_pred --c---------------------------ccccccccCCCC-------CCCCcchHHHHHHHHHHHHHcccCCCCCCCC
Q 005864 620 --M---------------------------NLSLNEILDPRL-------PLPSRNIQDKLISILEVALLCLEESPESRPT 663 (673)
Q Consensus 620 --~---------------------------~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps 663 (673)
. ......+..... ..........+.++.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 0 000000000000 0001122456778999999999999999999
Q ss_pred HHHHHH
Q 005864 664 MQTVCQ 669 (673)
Q Consensus 664 ~~~v~~ 669 (673)
++|+++
T Consensus 328 ~~ell~ 333 (373)
T 1q8y_A 328 AGGLVN 333 (373)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 999986
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-38 Score=330.34 Aligned_cols=200 Identities=22% Similarity=0.294 Sum_probs=170.2
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CC-----cccceeeeeecC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HR-----NIVKFYGFCSHP 473 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~~ 473 (673)
.++|++.+.||+|+||+||+|... +|+.||||+++.. .....++..|+.++..++ |+ +|+++++++...
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 468999999999999999999765 6889999998743 223566778888888874 44 599999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeC--CCCceEEecc
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS--SEYEARVSDF 551 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~--~~~~~kl~Df 551 (673)
+..++||||+++ +|.+++..... ..+++..+..++.|++.||.|||.+. .+|+||||||+||+++ .++.+||+||
T Consensus 129 ~~~~lv~e~~~~-~L~~~l~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~-~~ivHrDlkp~NIll~~~~~~~~kL~DF 205 (382)
T 2vx3_A 129 NHLCLVFEMLSY-NLYDLLRNTNF-RGVSLNLTRKFAQQMCTALLFLATPE-LSIIHCDLKPENILLCNPKRSAIKIVDF 205 (382)
T ss_dssp TEEEEEEECCCC-BHHHHHHHTTT-SCCCHHHHHHHHHHHHHHHHHHTSTT-TCEECCCCSGGGEEESSTTSCCEEECCC
T ss_pred CceEEEEecCCC-CHHHHHhhcCc-CCCCHHHHHHHHHHHHHHHHHhccCC-CCEEcCCCCcccEEEecCCCCcEEEEec
Confidence 999999999975 99999987542 35899999999999999999999521 1899999999999995 4678999999
Q ss_pred cceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccc
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFI 610 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 610 (673)
|+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 206 G~a~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 206 GSSCQLGQR---IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TTCEETTCC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cCceecccc---cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999876432 23467899999999999999999999999999999999999999743
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-38 Score=317.00 Aligned_cols=230 Identities=14% Similarity=0.082 Sum_probs=184.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|.+. +|+.||||++...........+.+.+|+..+.+++||||+++++++.+++..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 57999999999999999999775 58999999998765544556788999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++++|.++++.. ....++.+++.|++.||+|||++ +|+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc--------
Confidence 999999999999643 23446788999999999999999 99999999999999999999998543
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
|++ .++.++|||||||++|||++|+.||......+.. .............+.....
T Consensus 175 ------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 230 (286)
T 3uqc_A 175 ------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGL-----APAERDTAGQPIEPADIDR 230 (286)
T ss_dssp ------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCS-----EECCBCTTSCBCCHHHHCT
T ss_pred ------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhh-----HHHHHHhccCCCChhhccc
Confidence 333 3688999999999999999999999854322110 0001111111111111112
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+.++.+++.+||+.||++| |+.|+++.|+
T Consensus 231 ~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~ 261 (286)
T 3uqc_A 231 DIPFQISAVAARSVQGDGGIR-SASTLLNLMQ 261 (286)
T ss_dssp TSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcccCCccC-CHHHHHHHHH
Confidence 334568999999999999999 9999999986
|
| >2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-37 Score=335.04 Aligned_cols=313 Identities=21% Similarity=0.199 Sum_probs=288.1
Q ss_pred CccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccccc
Q 005864 3 HLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISE 82 (673)
Q Consensus 3 ~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~ 82 (673)
+++ .+|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|.+++..|.+|.++++|++|+|++|+++.++..
T Consensus 22 ~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 98 (477)
T 2id5_A 22 RFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLG 98 (477)
T ss_dssp CCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTT
T ss_pred CcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcc
Confidence 455 6777775 6899999999999998899999999999999999999988899999999999999999999999999
Q ss_pred ccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCC
Q 005864 83 VFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSL 162 (673)
Q Consensus 83 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L 162 (673)
.|..+++|++|+|++|.+....+..|.++++|++|+|++|.++...+..|..+++|++|++++|.+++..+..+..+++|
T Consensus 99 ~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 178 (477)
T 2id5_A 99 VFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGL 178 (477)
T ss_dssp SSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTC
T ss_pred cccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCC
Confidence 99999999999999999999989999999999999999999999889999999999999999999997766779999999
Q ss_pred CEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCC
Q 005864 163 NYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHN 242 (673)
Q Consensus 163 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N 242 (673)
+.|+|++|.+.+..+..|..+++|+.|++++|...+.++.......+|+.|++++|+++...+..|..+++|+.|+|++|
T Consensus 179 ~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 258 (477)
T 2id5_A 179 IVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYN 258 (477)
T ss_dssp CEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSS
T ss_pred cEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCC
Confidence 99999999999888889999999999999999987777777777779999999999999877778999999999999999
Q ss_pred cCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCc-ccccCccccccCCcCCCC
Q 005864 243 FLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNST-GFQYDPIQALRGNRGLCG 318 (673)
Q Consensus 243 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~-~~~~~~~~~~~~n~~~c~ 318 (673)
.+++..+..|..+++|+.|+|++|++++..|..|..+++|+.|++++|.+++.++..+ .........+.+|++.|.
T Consensus 259 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 259 PISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp CCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred cCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCc
Confidence 9998888889999999999999999999999999999999999999999999877643 345566778899998885
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-38 Score=322.57 Aligned_cols=253 Identities=20% Similarity=0.277 Sum_probs=179.8
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||.||+|... +|+.||||++...... ....+.+.++..+++.++||||+++++++..++..++|
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNK-EENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCH-HHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccc-hHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 357888999999999999999875 7999999998764322 22344555666678888999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH-DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|||+ ++.+..+..... ..+++..+..++.|+++||+|||+ . +++||||||+||+++.++.+||+|||++....
T Consensus 103 ~e~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 103 MELM-GTCAEKLKKRMQ--GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp ECCC-SEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred Eecc-CCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 9999 446655554322 458899999999999999999998 6 89999999999999999999999999997664
Q ss_pred CCCCCceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 559 PGSSNWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
... ......+++.|+|||.+. ...++.++||||||+++|||++|+.||...... ......+.....+
T Consensus 177 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~~ 248 (318)
T 2dyl_A 177 DDK-AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD-------FEVLTKVLQEEPP 248 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH-------HHHHHHHHHSCCC
T ss_pred CCc-cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc-------HHHHHHHhccCCC
Confidence 332 223456899999999984 556889999999999999999999998742111 0011111111111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
... .....+.++.+++.+||+.||.+|||++|+++
T Consensus 249 ~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 249 LLP-GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CCC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCC-ccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 000 00112345889999999999999999999975
|
| >3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-37 Score=333.74 Aligned_cols=306 Identities=23% Similarity=0.249 Sum_probs=266.7
Q ss_pred cCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccc-cCccccCCCCCcEEEccCcccccccccccC
Q 005864 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQ-IPRSLRNLASLNRVHLEQNHLTGNISEVFG 85 (673)
Q Consensus 7 ~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~-~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~ 85 (673)
.+|. +. ++|++|+|++|.|++..|..|+++++|++|+|++|.+.+. .+..|.++++|++|+|++|+++++.+..|.
T Consensus 24 ~lp~-l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 100 (455)
T 3v47_A 24 QVPE-LP--AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFN 100 (455)
T ss_dssp SCCC-CC--TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTT
T ss_pred cCCC-CC--CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhcc
Confidence 5566 33 7899999999999998899999999999999999999744 467899999999999999999999999999
Q ss_pred CCCCccEEEccCCccccccc--cCccccCCCcEEEcccCccCccCChh-hhccccccccccccccccccCCccccCC--C
Q 005864 86 IYPNLTFLDISHNNFYGEIW--SSWGKCQQLGTLNFSMNNITGSIPPE-IGKLYQLHKLDFSLNQIVGEIPIELGNL--K 160 (673)
Q Consensus 86 ~l~~L~~L~L~~n~i~~~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~-l~~l~~L~~L~l~~n~i~~~~~~~l~~l--~ 160 (673)
.+++|++|+|++|.+++..+ ..+..+++|++|+|++|.+++..|.. +.++++|++|++++|++++..+..+..+ .
T Consensus 101 ~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~ 180 (455)
T 3v47_A 101 GLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGK 180 (455)
T ss_dssp TCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTC
T ss_pred CcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccc
Confidence 99999999999999987444 44999999999999999999887776 8999999999999999998888888776 7
Q ss_pred CCCEEEccCccccccCCccc--------cCCCCCCEEEeCCCCCCCcCCccccc--------------------------
Q 005864 161 SLNYLVLNGNKLSGNLPRVL--------GSLSELEYLDLSTNKLSGSIPETLGN-------------------------- 206 (673)
Q Consensus 161 ~L~~L~L~~n~l~~~~~~~l--------~~l~~L~~L~l~~n~l~~~~~~~l~~-------------------------- 206 (673)
+|+.|++++|.+.+..+..+ ..+++|+.|++++|.+++..|..+..
T Consensus 181 ~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~ 260 (455)
T 3v47_A 181 HFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTN 260 (455)
T ss_dssp EEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCS
T ss_pred cccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhh
Confidence 99999999999996555433 36689999999999987655544332
Q ss_pred -------------cccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCc
Q 005864 207 -------------LLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIP 273 (673)
Q Consensus 207 -------------l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 273 (673)
.++|+.|++++|.+++..|..+..+++|+.|++++|.+.+..|..|..+++|++|+|++|.+++..+
T Consensus 261 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 340 (455)
T 3v47_A 261 FKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDS 340 (455)
T ss_dssp SCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECG
T ss_pred hccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcCh
Confidence 2589999999999999999999999999999999999998888899999999999999999999999
Q ss_pred cccccCCCccEEEccCccccCCCCCCc-ccccCccccccCCcC
Q 005864 274 SCFEGMHGLSCIDISYNELLGLIPNST-GFQYDPIQALRGNRG 315 (673)
Q Consensus 274 ~~~~~~~~L~~l~l~~N~l~~~~~~~~-~~~~~~~~~~~~n~~ 315 (673)
..|..+++|++|++++|.+++..|... .........+.+|.-
T Consensus 341 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 383 (455)
T 3v47_A 341 RMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQL 383 (455)
T ss_dssp GGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred hHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCcc
Confidence 999999999999999999999877643 445555666676653
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-38 Score=326.85 Aligned_cols=256 Identities=19% Similarity=0.261 Sum_probs=197.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CC-CEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCc------ccceeeeeecC
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SG-EVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN------IVKFYGFCSHP 473 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~ 473 (673)
++|++.+.||+|+||+||+|... ++ +.||+|+++.. ....+.+.+|+.+++.++|++ ++.+++++...
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 94 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH 94 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC
Confidence 57999999999999999999764 44 68999998643 223567888999999998766 89999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEe-------------
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLL------------- 540 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill------------- 540 (673)
+..++||||+ ++++.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+||++
T Consensus 95 ~~~~lv~e~~-~~~l~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 95 GHMCIAFELL-GKNTFEFLKENNF-QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp TEEEEEEECC-CCBHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-
T ss_pred CeEEEEEecc-CCChHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccc
Confidence 9999999999 5677777765432 4589999999999999999999999 99999999999999
Q ss_pred ------CCCCceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccc
Q 005864 541 ------SSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLS 614 (673)
Q Consensus 541 ------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~ 614 (673)
+.++.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......+
T Consensus 170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 246 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFGSATFDHEH---HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246 (355)
T ss_dssp CCCEEEESCCCEEECCCTTCEETTSC---CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred cccccccCCCcEEEeecCcccccccc---ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 56789999999999875432 234578999999999999999999999999999999999999997432211
Q ss_pred ccc-------ccccccc------ccccCCCCCCC-------------------CcchHHHHHHHHHHHHHcccCCCCCCC
Q 005864 615 SSS-------SNMNLSL------NEILDPRLPLP-------------------SRNIQDKLISILEVALLCLEESPESRP 662 (673)
Q Consensus 615 ~~~-------~~~~~~~------~~~~~~~~~~~-------------------~~~~~~~~~~l~~li~~cl~~dp~~Rp 662 (673)
... ....... ..........+ .......+.++.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 326 (355)
T 2eu9_A 247 HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRI 326 (355)
T ss_dssp HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSC
T ss_pred HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCc
Confidence 000 0000000 00000000000 001123355789999999999999999
Q ss_pred CHHHHHH
Q 005864 663 TMQTVCQ 669 (673)
Q Consensus 663 s~~~v~~ 669 (673)
|++|+++
T Consensus 327 t~~e~l~ 333 (355)
T 2eu9_A 327 TLAEALL 333 (355)
T ss_dssp CHHHHTT
T ss_pred CHHHHhc
Confidence 9999974
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-37 Score=309.51 Aligned_cols=230 Identities=22% Similarity=0.330 Sum_probs=180.3
Q ss_pred cCCCcc-ceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHH-hccCCCcccceeeeeec----CC
Q 005864 402 KNFDAE-QCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKAL-TEIRHRNIVKFYGFCSH----PR 474 (673)
Q Consensus 402 ~~~~~~-~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~ 474 (673)
++|.+. +.||+|+||.||+|.. .+|+.||+|++... ..+.+|+.++ +..+||||+++++++.. ..
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 88 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 88 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence 456666 7899999999999976 47999999998542 3456788887 55589999999999876 67
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC---CCceEEecc
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS---EYEARVSDF 551 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Df 551 (673)
..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Df 164 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 164 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred eEEEEEeecCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecc
Confidence 78999999999999999987542 4589999999999999999999999 9999999999999998 788999999
Q ss_pred cceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
|++.... +..++.++||||+||++|||++|+.||......... ......+....
T Consensus 165 g~a~~~~----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~----~~~~~~~~~~~ 218 (299)
T 3m2w_A 165 GFAKETT----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS----PGMKTRIRMGQ 218 (299)
T ss_dssp TTCEECT----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-----------CCSCCSSCTTC
T ss_pred ccccccc----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh----HHHHHHHhhcc
Confidence 9987542 234678999999999999999999999743321110 11111122222
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+.......+.++.+++.+||+.||++|||++|+++
T Consensus 219 ~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 219 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp CSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 22222222234567999999999999999999999986
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-37 Score=346.54 Aligned_cols=236 Identities=22% Similarity=0.333 Sum_probs=191.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC--CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCe----
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP--SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRH---- 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 475 (673)
++|++.+.||+|+||+||+|.+. +|+.||||++... ........+.+|+.++.+++||||+++++++...+.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS--GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS--CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc--CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 57999999999999999999875 6899999988653 233456788999999999999999999999987655
Q ss_pred -eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 476 -SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 476 -~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
.++||||+++++|.+++.. .+++.++..++.||+.||.|||++ +|+||||||+||+++.+ .+||+|||++
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp EEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred eeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccc
Confidence 6999999999999988754 489999999999999999999999 99999999999999986 8999999999
Q ss_pred eecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCC
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (673)
+..... ....||++|+|||++.+.. +.++|||||||++|||++|..||..... + .++
T Consensus 229 ~~~~~~----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~----------------~-~~~- 285 (681)
T 2pzi_A 229 SRINSF----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV----------------D-GLP- 285 (681)
T ss_dssp EETTCC----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC----------------S-SCC-
T ss_pred hhcccC----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc----------------c-ccc-
Confidence 876543 4457899999999987654 8899999999999999999888763110 0 011
Q ss_pred CCcchHHHHHHHHHHHHHcccCCCCCCCC-HHHHHHHh
Q 005864 635 PSRNIQDKLISILEVALLCLEESPESRPT-MQTVCQLL 671 (673)
Q Consensus 635 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps-~~~v~~~L 671 (673)
........+..+.+++.+||+.||++||+ ++++.+.|
T Consensus 286 ~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l 323 (681)
T 2pzi_A 286 EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQL 323 (681)
T ss_dssp TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHH
T ss_pred ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHH
Confidence 11122234467899999999999999995 55555443
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-36 Score=334.78 Aligned_cols=184 Identities=25% Similarity=0.242 Sum_probs=132.2
Q ss_pred ccccccccccccccccCCccccCCCCCCEEEccCccccccCC-ccccCCCCCCEEEeCCCCCCCcCCccccccccccEEE
Q 005864 136 YQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLP-RVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLN 214 (673)
Q Consensus 136 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 214 (673)
++|++|++++|.++ ..|..+..+++|+.|++++|++.+..+ ..+..+++|+.|++++|.+++..|..+..+++|+.|+
T Consensus 376 ~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 454 (606)
T 3vq2_A 376 NSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLK 454 (606)
T ss_dssp SCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred CcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEE
Confidence 33333333334333 233455566667777777777765555 5677777777788877777777777777888888888
Q ss_pred ccCCcCcc-CCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCcccc
Q 005864 215 LSNNQFRK-EFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELL 293 (673)
Q Consensus 215 l~~n~l~~-~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~ 293 (673)
+++|.+++ ..|..+..+++|+.|++++|.+++..|..+..+++|++|++++|++++..|..+..+++|+.|++++|+++
T Consensus 455 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 534 (606)
T 3vq2_A 455 MAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE 534 (606)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC
T ss_pred CCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc
Confidence 88888876 36777888888888888888888777778888888888888888888888888888888888888888888
Q ss_pred CCCCCCcccc-cCccccccCCcCCCCCC
Q 005864 294 GLIPNSTGFQ-YDPIQALRGNRGLCGDV 320 (673)
Q Consensus 294 ~~~~~~~~~~-~~~~~~~~~n~~~c~~~ 320 (673)
..++....+. ......+.+|++.|+.+
T Consensus 535 ~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 535 TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 6555433333 35566788888887543
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-37 Score=324.26 Aligned_cols=244 Identities=14% Similarity=0.112 Sum_probs=181.8
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCC-Ccccce---------eee-
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH-RNIVKF---------YGF- 469 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l---------~~~- 469 (673)
..|...+.||+|+||+||+|.+ .+|+.||||++...........+.+.+|+.++..++| +|.... .+.
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 4567788999999999999975 4799999999875433333446779999999999987 222111 111
Q ss_pred -----------eec-----CCeeeEEEecccCCChHHHHhc----CCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeE
Q 005864 470 -----------CSH-----PRHSFLVYECLERGSLAEILSN----DGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIV 529 (673)
Q Consensus 470 -----------~~~-----~~~~~lv~e~~~~gsL~~~l~~----~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~iv 529 (673)
+.. ....+++|+++ +++|.+++.. ......+++..+..++.|+++||+|||++ +|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 111 12346677755 5799999852 12235689999999999999999999999 999
Q ss_pred EecCCCCCeEeCCCCceEEecccceeecCCCCCCceeccccccccccccc----------ccCCcCcchhHHHHHHHHHH
Q 005864 530 HRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELA----------YTMKVTEKCDVYSFGVLALE 599 (673)
Q Consensus 530 H~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~----------~~~~~~~~~Dv~slG~il~e 599 (673)
||||||+||+++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++||
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~---~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~e 309 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS---AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYW 309 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE---ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc---cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999999865432 344567 999999998 55668899999999999999
Q ss_pred HHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 600 VIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 600 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
|++|+.||....... ....++..... .+.++.+++.+||+.||++|||+.|+++
T Consensus 310 lltg~~Pf~~~~~~~--------~~~~~~~~~~~--------~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 310 IWCADLPNTDDAALG--------GSEWIFRSCKN--------IPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHSSCCCCTTGGGS--------CSGGGGSSCCC--------CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHCCCCCCCcchhh--------hHHHHHhhccc--------CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999999997433211 11112221111 1245889999999999999999888754
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-35 Score=326.55 Aligned_cols=296 Identities=21% Similarity=0.215 Sum_probs=212.3
Q ss_pred CCCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccc
Q 005864 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI 80 (673)
Q Consensus 1 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~ 80 (673)
+|+|++..|.+|+++++|++|+|++|.++++.|..|+++++|++|+|++|++++..|.+|.++++|++|+|++|+++++.
T Consensus 42 ~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~ 121 (606)
T 3t6q_A 42 FNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSID 121 (606)
T ss_dssp TCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGG
T ss_pred CCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCC
Confidence 47899888999999999999999999999888999999999999999999999888899999999999999999999888
Q ss_pred ccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhcccccc--ccccccccccccCCccccC
Q 005864 81 SEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLH--KLDFSLNQIVGEIPIELGN 158 (673)
Q Consensus 81 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~--~L~l~~n~i~~~~~~~l~~ 158 (673)
+..|..+++|++|+|++|.+++.....+..+++|++|++++|.+++..+..++.+++|+ .|++++|.+++..|..+..
T Consensus 122 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~ 201 (606)
T 3t6q_A 122 FIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDS 201 (606)
T ss_dssp GSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTT
T ss_pred cchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhh
Confidence 88899999999999999999876666666689999999999999987788888888888 7788888777655443321
Q ss_pred C---------------------------------------------------CCCCEEEccCccccccCCccccCCCCCC
Q 005864 159 L---------------------------------------------------KSLNYLVLNGNKLSGNLPRVLGSLSELE 187 (673)
Q Consensus 159 l---------------------------------------------------~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 187 (673)
. .+|+.|++++|.+++..+..|..+++|+
T Consensus 202 ~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 281 (606)
T 3t6q_A 202 AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQ 281 (606)
T ss_dssp CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCS
T ss_pred ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCC
Confidence 1 0445555555555555555555566666
Q ss_pred EEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcc-cccCCCcccEEEecCc
Q 005864 188 YLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPP-QICNLESLEKLNVSHN 266 (673)
Q Consensus 188 ~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~-~~~~l~~L~~L~l~~N 266 (673)
+|++++|.++ .+|..+..+++|++|++++|.+++..|..+..+++|+.|++++|.+.+.++. .+..+++|++|++++|
T Consensus 282 ~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n 360 (606)
T 3t6q_A 282 ELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHD 360 (606)
T ss_dssp EEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSS
T ss_pred EEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCC
Confidence 6666666665 4555555566666666666666555555555555555555555555543333 2555555555555555
Q ss_pred cccccC--ccccccCCCccEEEccCccccCCCC
Q 005864 267 NLSGLI--PSCFEGMHGLSCIDISYNELLGLIP 297 (673)
Q Consensus 267 ~l~~~~--~~~~~~~~~L~~l~l~~N~l~~~~~ 297 (673)
.+++.. +..+..+++|++|++++|++.+..|
T Consensus 361 ~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 393 (606)
T 3t6q_A 361 DIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKT 393 (606)
T ss_dssp CCCEEEESTTTTTTCTTCCEEECCSCSCEEECT
T ss_pred ccccccCcchhcccCCCCCEEECCCCcCCcCCH
Confidence 555443 4445555555555555555554444
|
| >3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-35 Score=328.69 Aligned_cols=299 Identities=21% Similarity=0.243 Sum_probs=169.8
Q ss_pred CCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEcc
Q 005864 17 NLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDIS 96 (673)
Q Consensus 17 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 96 (673)
+|++|++++|.+++..+..|+++++|++|++++|+++ .+|..+..+++|++|++++|++++..+..+..+++|++|+++
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 333 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIK 333 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECC
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECC
Confidence 4556666666666555555666666666666666655 445555556666666666666655555555566666666666
Q ss_pred CCcccc-ccccCccccCCCcEEEcccCccCccC--ChhhhccccccccccccccccccCCccccCCCCCCEEEccCcccc
Q 005864 97 HNNFYG-EIWSSWGKCQQLGTLNFSMNNITGSI--PPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLS 173 (673)
Q Consensus 97 ~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~ 173 (673)
+|.+.+ .....+..+++|++|++++|.+++.. +..+..+++|++|++++|++.+..+..+..+++|++|++++|+++
T Consensus 334 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 413 (606)
T 3t6q_A 334 GNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLK 413 (606)
T ss_dssp SCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEE
T ss_pred CCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCC
Confidence 665542 22333555566666666666655443 445555666666666666655555555555666666666666655
Q ss_pred ccCCc-cccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccC---CchhhhcccCCCeEeecCCcCCCCCc
Q 005864 174 GNLPR-VLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKE---FPVELEKLVQLSELDLSHNFLGGEIP 249 (673)
Q Consensus 174 ~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~---~~~~~~~l~~L~~L~ls~N~l~~~~~ 249 (673)
+..+. .+..+++|+.|++++|.+++..|..+..+++|+.|++++|++++. .+..+..+++|+.|++++|.+++..|
T Consensus 414 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 493 (606)
T 3t6q_A 414 VKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQ 493 (606)
T ss_dssp CCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECT
T ss_pred CcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccCh
Confidence 44332 255556666666666666555555555566666666666655541 22345555566666666666655555
Q ss_pred ccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCC-cccccCccccccCCcCCC
Q 005864 250 PQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNS-TGFQYDPIQALRGNRGLC 317 (673)
Q Consensus 250 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~-~~~~~~~~~~~~~n~~~c 317 (673)
..|..+++|+.|+|++|++++..|..+..++.| .|++++|++++.+|.. ..........+.+|++.|
T Consensus 494 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 561 (606)
T 3t6q_A 494 HAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDC 561 (606)
T ss_dssp TTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEEC
T ss_pred hhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccc
Confidence 555666666666666666665555566666666 6666666666555442 122333445555565555
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=332.12 Aligned_cols=306 Identities=24% Similarity=0.358 Sum_probs=261.7
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccC-----------------CCcccc--CCCCCCEEEcccCccccccCccccC
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGS-----------------VPGEIG--NLMQLTNLEIDNNQLFGQIPRSLRN 62 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~-----------------~~~~~~--~l~~L~~L~L~~n~i~~~~~~~l~~ 62 (673)
|+|++ +|+.++++++|++|+|++|.+++. +|..++ ++++|++|+|++|++.+.+|..|.+
T Consensus 193 n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~ 271 (636)
T 4eco_A 193 NNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKA 271 (636)
T ss_dssp CEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTT
T ss_pred CCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhc
Confidence 67888 999999999999999999999985 899999 9999999999999999999999999
Q ss_pred CCCCcEEEccCcc-ccc-ccccccCCC------CCccEEEccCCcccccccc--CccccCCCcEEEcccCccCccCChhh
Q 005864 63 LASLNRVHLEQNH-LTG-NISEVFGIY------PNLTFLDISHNNFYGEIWS--SWGKCQQLGTLNFSMNNITGSIPPEI 132 (673)
Q Consensus 63 l~~L~~L~L~~n~-i~~-~~~~~~~~l------~~L~~L~L~~n~i~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~~l 132 (673)
+++|++|+|++|+ +++ ..+..+..+ ++|++|+|++|+++ ..+. .++++++|+.|++++|.+++.+| .+
T Consensus 272 l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~ 349 (636)
T 4eco_A 272 LPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AF 349 (636)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CC
T ss_pred CCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hh
Confidence 9999999999998 887 666666665 99999999999999 5566 89999999999999999998888 89
Q ss_pred hccccccccccccccccccCCccccCCCC-CCEEEccCccccccCCccccCCC--CCCEEEeCCCCCCCcCCcccc----
Q 005864 133 GKLYQLHKLDFSLNQIVGEIPIELGNLKS-LNYLVLNGNKLSGNLPRVLGSLS--ELEYLDLSTNKLSGSIPETLG---- 205 (673)
Q Consensus 133 ~~l~~L~~L~l~~n~i~~~~~~~l~~l~~-L~~L~L~~n~l~~~~~~~l~~l~--~L~~L~l~~n~l~~~~~~~l~---- 205 (673)
..+++|++|++++|+++ .+|..+..+++ |++|++++|.++ .+|..+..++ +|+.|++++|.+++..|..+.
T Consensus 350 ~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~ 427 (636)
T 4eco_A 350 GSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDP 427 (636)
T ss_dssp EEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCS
T ss_pred CCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhccccc
Confidence 99999999999999998 88888999999 999999999999 7777777654 899999999999988888888
Q ss_pred ---ccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccc-cCC-------CcccEEEecCccccccCcc
Q 005864 206 ---NLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQI-CNL-------ESLEKLNVSHNNLSGLIPS 274 (673)
Q Consensus 206 ---~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~-~~l-------~~L~~L~l~~N~l~~~~~~ 274 (673)
.+++|+.|++++|+++...+..+..+++|+.|+|++|.++ .+|... ... ++|+.|+|++|+++ .+|.
T Consensus 428 ~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~ 505 (636)
T 4eco_A 428 TPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSD 505 (636)
T ss_dssp SCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCG
T ss_pred ccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccCh
Confidence 7889999999999999665566777899999999999998 555443 322 28999999999998 4566
Q ss_pred ccc--cCCCccEEEccCccccCCCCCCcccccCccccccCCc
Q 005864 275 CFE--GMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNR 314 (673)
Q Consensus 275 ~~~--~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~ 314 (673)
.+. .+++|+.|++++|++++.++............+.+|+
T Consensus 506 ~~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~ 547 (636)
T 4eco_A 506 DFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQR 547 (636)
T ss_dssp GGSTTTCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSCB
T ss_pred hhhhccCCCcCEEECCCCCCCCcChhhhcCCCCCEEECCCCc
Confidence 665 8999999999999999844444445555556665544
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=341.98 Aligned_cols=68 Identities=25% Similarity=0.347 Sum_probs=43.3
Q ss_pred ccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCcc--------------------cccCcccccc
Q 005864 252 ICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTG--------------------FQYDPIQALR 311 (673)
Q Consensus 252 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~--------------------~~~~~~~~~~ 311 (673)
|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++++.+|.... +.......+.
T Consensus 476 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~ 555 (844)
T 3j0a_A 476 FEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDIT 555 (844)
T ss_dssp SSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEE
T ss_pred hcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhHhCCcCEEEec
Confidence 45556666777777777666666666666666666666666655543221 2234556788
Q ss_pred CCcCCCCC
Q 005864 312 GNRGLCGD 319 (673)
Q Consensus 312 ~n~~~c~~ 319 (673)
+|++.|+.
T Consensus 556 ~Np~~C~c 563 (844)
T 3j0a_A 556 HNKFICEC 563 (844)
T ss_dssp EECCCCSS
T ss_pred CCCccccc
Confidence 99999853
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-37 Score=316.92 Aligned_cols=244 Identities=16% Similarity=0.130 Sum_probs=186.6
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhh-----hhHHHHHHHHHHHHHhccC---------CCccccee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLS-----EISVQREFLNEIKALTEIR---------HRNIVKFY 467 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~---------h~niv~l~ 467 (673)
++|++.+.||+|+||+||+|++ +|+.||||++...... .....+.+.+|+.+++.++ |||||++.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 20 EKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred ccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 5688899999999999999988 7899999999765321 2223467888999988886 55555555
Q ss_pred e-----------------eeec-------------CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHH
Q 005864 468 G-----------------FCSH-------------PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANAL 517 (673)
Q Consensus 468 ~-----------------~~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l 517 (673)
+ ++.+ ++..++||||+++|++.+.+.. ..+++..+..++.||+.||
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHHH
Confidence 4 4443 6789999999999987777644 3478999999999999999
Q ss_pred HHHh-hcCCCCeEEecCCCCCeEeCCCC--------------------ceEEecccceeecCCCCCCceecccccccccc
Q 005864 518 SYMH-HDCFPPIVHRDISSKNVLLSSEY--------------------EARVSDFGIAKFLKPGSSNWTEFAGTFGYVAP 576 (673)
Q Consensus 518 ~~LH-~~~~~~ivH~dlk~~Nill~~~~--------------------~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aP 576 (673)
+||| +. +|+||||||+|||++.++ .+||+|||+|+..... ...||+.|+||
T Consensus 175 ~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-----~~~gt~~y~aP 246 (336)
T 2vuw_A 175 AVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-----IVVFCDVSMDE 246 (336)
T ss_dssp HHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-----EEECCCCTTCS
T ss_pred HHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-----cEEEeecccCh
Confidence 9999 88 999999999999999887 8999999999876532 35789999999
Q ss_pred cccccCCcCcchhHHHHHHH-HHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHccc
Q 005864 577 ELAYTMKVTEKCDVYSFGVL-ALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLE 655 (673)
Q Consensus 577 E~~~~~~~~~~~Dv~slG~i-l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 655 (673)
|++.+.. +.++||||+|++ .+++++|..||....+..... ....... ..............+.++.+++.+||+
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~s~~~~dli~~~L~ 321 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLT---DKMLKQM-TFKTKCNTPAMKQIKRKIQEFHRTMLN 321 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHH---HHHHHTC-CCSSCCCSHHHHHHHHHHHHHHHHGGG
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHH---Hhhhhhh-ccCcccchhhhhhcCHHHHHHHHHHhc
Confidence 9998766 889999998777 778888999986432211100 0000010 111112223455678889999999999
Q ss_pred CCCCCCCCHHHHH
Q 005864 656 ESPESRPTMQTVC 668 (673)
Q Consensus 656 ~dp~~Rps~~~v~ 668 (673)
.| |++|++
T Consensus 322 ~d-----sa~e~l 329 (336)
T 2vuw_A 322 FS-----SATDLL 329 (336)
T ss_dssp SS-----SHHHHH
T ss_pred cC-----CHHHHH
Confidence 76 999988
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-35 Score=321.83 Aligned_cols=159 Identities=18% Similarity=0.211 Sum_probs=100.3
Q ss_pred cCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCc--CCccccccccccEEEccCCcCcc-CCchhhhcccC
Q 005864 157 GNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGS--IPETLGNLLKVHYLNLSNNQFRK-EFPVELEKLVQ 233 (673)
Q Consensus 157 ~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~--~~~~l~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~ 233 (673)
..+++|++|++++|.+++..|..+..+++|+.|++++|.+++. .|..+..+++|+.|++++|++++ ..+..+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 4456666666666666665666666666666666666666642 23456666666667776666665 33334566666
Q ss_pred CCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCC-CcccccCccccccC
Q 005864 234 LSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPN-STGFQYDPIQALRG 312 (673)
Q Consensus 234 L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~-~~~~~~~~~~~~~~ 312 (673)
|+.|++++|.+++..|..+. ++|+.|+|++|+++.+ |..+..+++|+.|++++|+++..++. ...........+.+
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~i-p~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 506 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSI-PKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHD 506 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCC-CTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCS
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCccc-ChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecC
Confidence 67777777766654444333 5777777777777744 44444777788888888887765554 33444455566777
Q ss_pred CcCCCC
Q 005864 313 NRGLCG 318 (673)
Q Consensus 313 n~~~c~ 318 (673)
|++.|+
T Consensus 507 N~~~c~ 512 (562)
T 3a79_B 507 NPWDCT 512 (562)
T ss_dssp CCBCCC
T ss_pred CCcCCC
Confidence 777764
|
| >4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-35 Score=329.34 Aligned_cols=304 Identities=17% Similarity=0.247 Sum_probs=179.9
Q ss_pred ccCCCccc--CCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCc-ccc-ccCccccCC------CCCcEEEccCcc
Q 005864 6 GAIPPSVG--NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQ-LFG-QIPRSLRNL------ASLNRVHLEQNH 75 (673)
Q Consensus 6 ~~~p~~~~--~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~-i~~-~~~~~l~~l------~~L~~L~L~~n~ 75 (673)
+.+|+.++ ++++|++|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..+..+ ++|++|+|++|+
T Consensus 237 ~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~ 316 (636)
T 4eco_A 237 QYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNN 316 (636)
T ss_dssp HHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSC
T ss_pred ccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCc
Confidence 34777777 77888888888887777777777777888888888877 776 666666665 777777777777
Q ss_pred ccccccc--ccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhcccc-ccccccccccccccC
Q 005864 76 LTGNISE--VFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQ-LHKLDFSLNQIVGEI 152 (673)
Q Consensus 76 i~~~~~~--~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~-L~~L~l~~n~i~~~~ 152 (673)
++. .+. .|..+++|++|+|++|.+++..+ .+..+++|+.|++++|.++ .+|..+..+++ |++|++++|.++ .+
T Consensus 317 l~~-ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~l 392 (636)
T 4eco_A 317 LKT-FPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YI 392 (636)
T ss_dssp CSS-CCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SC
T ss_pred CCc-cCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-cc
Confidence 773 344 67777777777777777775445 6666666666666666666 55555666666 666666666665 45
Q ss_pred CccccCCC--CCCEEEccCccccccCCcccc-------CCCCCCEEEeCCCCCCCcCCccccccc---------------
Q 005864 153 PIELGNLK--SLNYLVLNGNKLSGNLPRVLG-------SLSELEYLDLSTNKLSGSIPETLGNLL--------------- 208 (673)
Q Consensus 153 ~~~l~~l~--~L~~L~L~~n~l~~~~~~~l~-------~l~~L~~L~l~~n~l~~~~~~~l~~l~--------------- 208 (673)
|..+..++ +|++|++++|.+++..|..+. .+++|+.|++++|.++...+..+..++
T Consensus 393 p~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i 472 (636)
T 4eco_A 393 PNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEI 472 (636)
T ss_dssp CSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBC
T ss_pred chhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCc
Confidence 55444432 555555555555544444444 344444444444444422222222334
Q ss_pred ----------------cccEEEccCCcCccCCchhhh--cccCCCeEeecCCcCCCCCcccccCCCcccEEEe------c
Q 005864 209 ----------------KVHYLNLSNNQFRKEFPVELE--KLVQLSELDLSHNFLGGEIPPQICNLESLEKLNV------S 264 (673)
Q Consensus 209 ----------------~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l------~ 264 (673)
+|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+| +
T Consensus 473 ~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls 550 (636)
T 4eco_A 473 PKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQ 550 (636)
T ss_dssp CSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTT
T ss_pred CHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccc
Confidence 5555555555555 3444443 55555555555555554 5555555555555555 3
Q ss_pred CccccccCccccccCCCccEEEccCccccCCCCCCcccccCccccccCCcCCC
Q 005864 265 HNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLC 317 (673)
Q Consensus 265 ~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c 317 (673)
+|++.+.+|..+..+++|++|++++|++ +.+|.... .......+.+|+..|
T Consensus 551 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~-~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 551 GNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT-PNISVLDIKDNPNIS 601 (636)
T ss_dssp CCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC-TTCCEEECCSCTTCE
T ss_pred cCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh-CcCCEEECcCCCCcc
Confidence 3455555555555566666666666665 33343222 334444555555544
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=326.54 Aligned_cols=318 Identities=21% Similarity=0.254 Sum_probs=210.7
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCcccc-----ccC----ccccCCCCCcEEEcc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFG-----QIP----RSLRNLASLNRVHLE 72 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~-----~~~----~~l~~l~~L~~L~L~ 72 (673)
|+|++..|..|+++++|++|+|++|.+++..|..|.++++|+.|++++|...+ .+| ..|..+++|++|+++
T Consensus 258 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~ 337 (680)
T 1ziw_A 258 NNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNME 337 (680)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECC
T ss_pred CCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECC
Confidence 34444444455555555555555555554444444444444444444332211 111 145556666666666
Q ss_pred CcccccccccccCCCCCccEEEccCC----------------------------ccccccccCccccCCCcEEEcccCcc
Q 005864 73 QNHLTGNISEVFGIYPNLTFLDISHN----------------------------NFYGEIWSSWGKCQQLGTLNFSMNNI 124 (673)
Q Consensus 73 ~n~i~~~~~~~~~~l~~L~~L~L~~n----------------------------~i~~~~~~~~~~l~~L~~L~L~~n~l 124 (673)
+|++.++.+..|..+++|++|++++| +++++.+..+..+++|+.|++++|.+
T Consensus 338 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 417 (680)
T 1ziw_A 338 DNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEI 417 (680)
T ss_dssp SCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcC
Confidence 66666666666666666666555544 34444445555566666666666666
Q ss_pred CccCC-hhhhccccccccccccccccccCCccccCCCCCCEEEccCcccc--ccCCccccCCCCCCEEEeCCCCCCCcCC
Q 005864 125 TGSIP-PEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLS--GNLPRVLGSLSELEYLDLSTNKLSGSIP 201 (673)
Q Consensus 125 ~~~~~-~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~--~~~~~~l~~l~~L~~L~l~~n~l~~~~~ 201 (673)
++.++ ..+.++++|++|++++|++.+..+..+..+++|+.|++++|.++ +..|..|..+++|+.|++++|.+++..+
T Consensus 418 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~ 497 (680)
T 1ziw_A 418 GQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANIND 497 (680)
T ss_dssp EEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCT
T ss_pred ccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCCh
Confidence 54333 45556666666666666666555566666666666666666665 3566777888888888888888887777
Q ss_pred ccccccccccEEEccCCcCccCCc--------hhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCc
Q 005864 202 ETLGNLLKVHYLNLSNNQFRKEFP--------VELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIP 273 (673)
Q Consensus 202 ~~l~~l~~L~~L~l~~n~l~~~~~--------~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 273 (673)
..|..+++|+.|++++|++++..+ ..|..+++|+.|+|++|.++...+..|.++++|+.|+|++|+++++.+
T Consensus 498 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~ 577 (680)
T 1ziw_A 498 DMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPA 577 (680)
T ss_dssp TTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred hhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCH
Confidence 778888888888888888876422 236778888899999998885544568889999999999999998888
Q ss_pred cccccCCCccEEEccCccccCCCCCCc--ccccCccccccCCcCCCCC
Q 005864 274 SCFEGMHGLSCIDISYNELLGLIPNST--GFQYDPIQALRGNRGLCGD 319 (673)
Q Consensus 274 ~~~~~~~~L~~l~l~~N~l~~~~~~~~--~~~~~~~~~~~~n~~~c~~ 319 (673)
..|..+++|+.|++++|++++.+|... .+.......+.+|++.|+.
T Consensus 578 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 578 SVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTC 625 (680)
T ss_dssp TTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCC
T ss_pred hHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCC
Confidence 888889999999999999988877644 3556667788999999964
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=317.87 Aligned_cols=118 Identities=25% Similarity=0.248 Sum_probs=71.6
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS 81 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 81 (673)
|+|+ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|.+|.++++|++|+|++|+|+.++.
T Consensus 10 n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~ 86 (520)
T 2z7x_B 10 NGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISC 86 (520)
T ss_dssp SCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEEC
T ss_pred CCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCc
Confidence 4555 4555554 566666666666665555666666666666666666665556666666666666666666664433
Q ss_pred cccCCCCCccEEEccCCccccc-cccCccccCCCcEEEcccCccC
Q 005864 82 EVFGIYPNLTFLDISHNNFYGE-IWSSWGKCQQLGTLNFSMNNIT 125 (673)
Q Consensus 82 ~~~~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~ 125 (673)
. .+++|++|+|++|.+++. .+..++++++|++|++++|.++
T Consensus 87 ~---~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~ 128 (520)
T 2z7x_B 87 H---PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLE 128 (520)
T ss_dssp C---CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCC
T ss_pred c---ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccc
Confidence 3 556666666666666542 3455666666666666666554
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=321.30 Aligned_cols=318 Identities=21% Similarity=0.226 Sum_probs=216.8
Q ss_pred CCCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccc
Q 005864 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI 80 (673)
Q Consensus 1 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~ 80 (673)
.|+|++..+.+|.++++|++|+|++|.+++..++.|+++++|++|+|++|.++...+.+|.++++|++|++++|+++.+.
T Consensus 37 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~ 116 (570)
T 2z63_A 37 FNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE 116 (570)
T ss_dssp SCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCST
T ss_pred CCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCC
Confidence 36778777778888888888888888888777788888888888888888888777778888888888888888888777
Q ss_pred ccccCCCCCccEEEccCCccccc-cccCccccCCCcEEEcccCccCccCChhhhcccc----------------------
Q 005864 81 SEVFGIYPNLTFLDISHNNFYGE-IWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQ---------------------- 137 (673)
Q Consensus 81 ~~~~~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~---------------------- 137 (673)
...|+.+++|++|+|++|.+++. .+..++++++|++|++++|.+++..+..++.+++
T Consensus 117 ~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~ 196 (570)
T 2z63_A 117 NFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGA 196 (570)
T ss_dssp TCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTT
T ss_pred CccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHH
Confidence 66678888888888888887763 3677777888888888877776544443333333
Q ss_pred --------------------------------------------------------------------------------
Q 005864 138 -------------------------------------------------------------------------------- 137 (673)
Q Consensus 138 -------------------------------------------------------------------------------- 137 (673)
T Consensus 197 ~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~ 276 (570)
T 2z63_A 197 FKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIID 276 (570)
T ss_dssp TTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTT
T ss_pred hccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchh
Confidence
Q ss_pred -------ccccccccccccccCCccc------------------------------------------cCCCCCCEEEcc
Q 005864 138 -------LHKLDFSLNQIVGEIPIEL------------------------------------------GNLKSLNYLVLN 168 (673)
Q Consensus 138 -------L~~L~l~~n~i~~~~~~~l------------------------------------------~~l~~L~~L~L~ 168 (673)
|+.|++++|.+. .+|..+ ..+++|++|+++
T Consensus 277 ~~~~l~~L~~L~l~~~~l~-~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~ 355 (570)
T 2z63_A 277 LFNCLTNVSSFSLVSVTIE-RVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLS 355 (570)
T ss_dssp TTGGGTTCSEEEEESCEEC-SCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECC
T ss_pred hhcCcCcccEEEecCccch-hhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCc
Confidence 333333333322 111111 233455555555
Q ss_pred CccccccC--Ccc-----------------------ccCCCCCCEEEeCCCCCCCcCC-ccccccccccEEEccCCcCcc
Q 005864 169 GNKLSGNL--PRV-----------------------LGSLSELEYLDLSTNKLSGSIP-ETLGNLLKVHYLNLSNNQFRK 222 (673)
Q Consensus 169 ~n~l~~~~--~~~-----------------------l~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~l~~n~l~~ 222 (673)
+|.+++.. +.. +..+++|+.|++++|.+.+..+ ..+..+++|+.|++++|.+++
T Consensus 356 ~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~ 435 (570)
T 2z63_A 356 RNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV 435 (570)
T ss_dssp SSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEE
T ss_pred CCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccc
Confidence 55554322 223 4555566666666666554443 356666777777777777776
Q ss_pred CCchhhhcccCCCeEeecCCcCC-CCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCC-c
Q 005864 223 EFPVELEKLVQLSELDLSHNFLG-GEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNS-T 300 (673)
Q Consensus 223 ~~~~~~~~l~~L~~L~ls~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~-~ 300 (673)
..|..+..+++|+.|++++|.+. +.+|..+..+++|+.|++++|++++..|..|..+++|++|++++|++++.+|.. .
T Consensus 436 ~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 515 (570)
T 2z63_A 436 AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFD 515 (570)
T ss_dssp CCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred cchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhh
Confidence 66777777777777777777776 456677777777777888777777777777777788888888888877776653 2
Q ss_pred ccccCccccccCCcCCCCC
Q 005864 301 GFQYDPIQALRGNRGLCGD 319 (673)
Q Consensus 301 ~~~~~~~~~~~~n~~~c~~ 319 (673)
.........+.+|++.|..
T Consensus 516 ~l~~L~~L~l~~N~~~~~~ 534 (570)
T 2z63_A 516 RLTSLQKIWLHTNPWDCSC 534 (570)
T ss_dssp TCTTCCEEECCSSCBCCCT
T ss_pred cccCCcEEEecCCcccCCC
Confidence 3444556667777776653
|
| >3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-34 Score=327.91 Aligned_cols=296 Identities=22% Similarity=0.260 Sum_probs=254.4
Q ss_pred CCCccccCCCcccCCCCCCEEEeeCCcc-ccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccc
Q 005864 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSL-SGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGN 79 (673)
Q Consensus 1 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i-~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~ 79 (673)
.|+|++..|.+|+++++|++|+|++|.. ..+.|..|.++++|++|+|++|.+.+..|.+|.++++|++|+|++|.+++.
T Consensus 33 ~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~ 112 (844)
T 3j0a_A 33 FNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDA 112 (844)
T ss_dssp SCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSC
T ss_pred CCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcc
Confidence 4788888899999999999999999954 444488899999999999999999988899999999999999999999874
Q ss_pred ccc--ccCCCCCccEEEccCCccccccc-cCccccCCCcEEEcccCccCccCChhhhcc--ccccccccccccccccCCc
Q 005864 80 ISE--VFGIYPNLTFLDISHNNFYGEIW-SSWGKCQQLGTLNFSMNNITGSIPPEIGKL--YQLHKLDFSLNQIVGEIPI 154 (673)
Q Consensus 80 ~~~--~~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l--~~L~~L~l~~n~i~~~~~~ 154 (673)
.+. .|..+++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..+..+ ++|+.|++++|.+.+..+.
T Consensus 113 ~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~ 192 (844)
T 3j0a_A 113 VLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSV 192 (844)
T ss_dssp CSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCC
T ss_pred cccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCcccccccc
Confidence 443 48899999999999999987654 578899999999999999998888888877 8899999999999887777
Q ss_pred cccCCCC------CCEEEccCccccccCCccccC--------------------------------------CCCCCEEE
Q 005864 155 ELGNLKS------LNYLVLNGNKLSGNLPRVLGS--------------------------------------LSELEYLD 190 (673)
Q Consensus 155 ~l~~l~~------L~~L~L~~n~l~~~~~~~l~~--------------------------------------l~~L~~L~ 190 (673)
.+..+++ |+.|++++|.+++..+..+.. .++|+.|+
T Consensus 193 ~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~ 272 (844)
T 3j0a_A 193 DWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLD 272 (844)
T ss_dssp CCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEE
T ss_pred chhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEE
Confidence 7766655 999999999876554433321 26899999
Q ss_pred eCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccc
Q 005864 191 LSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSG 270 (673)
Q Consensus 191 l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 270 (673)
+++|.+.+..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+++..+..|..+++|+.|++++|++++
T Consensus 273 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~ 352 (844)
T 3j0a_A 273 LSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAI 352 (844)
T ss_dssp CTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCC
T ss_pred CCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCc
Confidence 99999988888889999999999999999998888899999999999999999998888899999999999999999998
Q ss_pred cCccccccCCCccEEEccCccccCCC
Q 005864 271 LIPSCFEGMHGLSCIDISYNELLGLI 296 (673)
Q Consensus 271 ~~~~~~~~~~~L~~l~l~~N~l~~~~ 296 (673)
..+..|..+++|+.|++++|.+++..
T Consensus 353 ~~~~~~~~l~~L~~L~Ls~N~l~~i~ 378 (844)
T 3j0a_A 353 IQDQTFKFLEKLQTLDLRDNALTTIH 378 (844)
T ss_dssp CCSSCSCSCCCCCEEEEETCCSCCCS
T ss_pred cChhhhcCCCCCCEEECCCCCCCccc
Confidence 88888999999999999999988643
|
| >3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-34 Score=319.47 Aligned_cols=171 Identities=19% Similarity=0.243 Sum_probs=157.6
Q ss_pred ChhhhccccccccccccccccccCC-ccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCC-cCCccccc
Q 005864 129 PPEIGKLYQLHKLDFSLNQIVGEIP-IELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSG-SIPETLGN 206 (673)
Q Consensus 129 ~~~l~~l~~L~~L~l~~n~i~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~-~~~~~l~~ 206 (673)
+..+..+++|+.|++++|++.+..+ ..+..+++|++|++++|.+++..|..+..+++|++|++++|.+++ ..|..+..
T Consensus 392 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 471 (606)
T 3vq2_A 392 SANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFAN 471 (606)
T ss_dssp CCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT
T ss_pred hhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhcc
Confidence 4567889999999999999997777 688999999999999999999899999999999999999999987 47889999
Q ss_pred cccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCC-CccEE
Q 005864 207 LLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMH-GLSCI 285 (673)
Q Consensus 207 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-~L~~l 285 (673)
+++|+.|++++|++++..|..|..+++|+.|++++|++++..|..+..+++|+.|+|++|+++.+ |..+..++ +|+.|
T Consensus 472 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~-p~~~~~l~~~L~~l 550 (606)
T 3vq2_A 472 TTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETS-KGILQHFPKSLAFF 550 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCE-ESCGGGSCTTCCEE
T ss_pred CCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCccc-CHhHhhhcccCcEE
Confidence 99999999999999999999999999999999999999988899999999999999999999955 66688887 59999
Q ss_pred EccCccccCCCCCCc
Q 005864 286 DISYNELLGLIPNST 300 (673)
Q Consensus 286 ~l~~N~l~~~~~~~~ 300 (673)
++++|++.+.++..+
T Consensus 551 ~l~~N~~~c~c~~~~ 565 (606)
T 3vq2_A 551 NLTNNSVACICEHQK 565 (606)
T ss_dssp ECCSCCCCCSSTTHH
T ss_pred EccCCCcccCCccHH
Confidence 999999999887643
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-34 Score=300.03 Aligned_cols=290 Identities=21% Similarity=0.186 Sum_probs=194.9
Q ss_pred ccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCcc
Q 005864 12 VGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLT 91 (673)
Q Consensus 12 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 91 (673)
+.++++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|+++.++...|..+++|+
T Consensus 65 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~ 144 (390)
T 3o6n_A 65 LDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLT 144 (390)
T ss_dssp HHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCc
Confidence 46666666666666666655555666666666666666666655556666666666666666666666555566666666
Q ss_pred EEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCcc
Q 005864 92 FLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNK 171 (673)
Q Consensus 92 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~ 171 (673)
+|+|++|.+++..+..+.++++|++|++++|.+++. .+..+++|+.|++++|.+++ +...++|+.|++++|.
T Consensus 145 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~ 216 (390)
T 3o6n_A 145 TLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNS 216 (390)
T ss_dssp EEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSC
T ss_pred EEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc-----cCCCCcceEEECCCCe
Confidence 666666666665556666666666666666666643 23445556666666665542 1233567777777777
Q ss_pred ccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCccc
Q 005864 172 LSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQ 251 (673)
Q Consensus 172 l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~ 251 (673)
++.... ...++|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..|..+++|+.|++++|+++ .+|..
T Consensus 217 l~~~~~---~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~ 290 (390)
T 3o6n_A 217 INVVRG---PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLY 290 (390)
T ss_dssp CCEEEC---CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC-EEECS
T ss_pred eeeccc---cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCc-ccCcc
Confidence 764422 2246788888888888743 46778888888888888888777888888888888888888887 45666
Q ss_pred ccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCcccccCccccccCCcCCCC
Q 005864 252 ICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCG 318 (673)
Q Consensus 252 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~ 318 (673)
+..+++|+.|++++|++++. |..+..+++|+.|++++|+++... ...+.......+.+|++.|.
T Consensus 291 ~~~l~~L~~L~L~~n~l~~~-~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 291 GQPIPTLKVLDLSHNHLLHV-ERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp SSCCTTCCEEECCSSCCCCC-GGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHH
T ss_pred cCCCCCCCEEECCCCcceec-CccccccCcCCEEECCCCccceeC--chhhccCCEEEcCCCCccch
Confidence 67788888888888888754 556777888888888888887664 23344555666777776663
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-34 Score=322.68 Aligned_cols=276 Identities=21% Similarity=0.255 Sum_probs=193.3
Q ss_pred cCCCccc--CCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCc-ccc-ccCccccCCC-------CCcEEEccCcc
Q 005864 7 AIPPSVG--NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQ-LFG-QIPRSLRNLA-------SLNRVHLEQNH 75 (673)
Q Consensus 7 ~~p~~~~--~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~-i~~-~~~~~l~~l~-------~L~~L~L~~n~ 75 (673)
.+|+.++ ++++|++|+|++|.+.+.+|..|.++++|+.|+|++|+ +++ .+|..+..++ +|+.|+|++|+
T Consensus 480 ~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~ 559 (876)
T 4ecn_A 480 YENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNN 559 (876)
T ss_dssp HTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSC
T ss_pred cCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCc
Confidence 5999988 99999999999999999999999999999999999998 887 6777666555 99999999999
Q ss_pred cccccc-cccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhcccc-ccccccccccccccCC
Q 005864 76 LTGNIS-EVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQ-LHKLDFSLNQIVGEIP 153 (673)
Q Consensus 76 i~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~-L~~L~l~~n~i~~~~~ 153 (673)
++.++. ..|..+++|++|+|++|.++ ..+ .+..+++|+.|+|++|.++ .+|..+..+++ |+.|+|++|.++ .+|
T Consensus 560 L~~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp 635 (876)
T 4ecn_A 560 LEEFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIP 635 (876)
T ss_dssp CCBCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCC
T ss_pred CCccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCc
Confidence 994433 28999999999999999998 444 8899999999999999999 78888999998 999999999988 677
Q ss_pred ccccCCCC--CCEEEccCccccccCCccc---c--CCCCCCEEEeCCCCCCCcCCccc-cccccccEEEccCCcCccCCc
Q 005864 154 IELGNLKS--LNYLVLNGNKLSGNLPRVL---G--SLSELEYLDLSTNKLSGSIPETL-GNLLKVHYLNLSNNQFRKEFP 225 (673)
Q Consensus 154 ~~l~~l~~--L~~L~L~~n~l~~~~~~~l---~--~l~~L~~L~l~~n~l~~~~~~~l-~~l~~L~~L~l~~n~l~~~~~ 225 (673)
..+..++. |+.|+|++|++++.+|... . .+++|+.|+|++|.++ .+|..+ ..+++|+.|+|++|+++...+
T Consensus 636 ~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip~ 714 (876)
T 4ecn_A 636 NIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTSIPE 714 (876)
T ss_dssp SCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSCCCT
T ss_pred hhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCccCh
Confidence 77666543 7777777777765444221 1 2235555555555555 333332 345555555555555552222
Q ss_pred hhhhc-------ccCCCeEeecCCcCCCCCccccc--CCCcccEEEecCccccccCccccccCCCccEEEccC
Q 005864 226 VELEK-------LVQLSELDLSHNFLGGEIPPQIC--NLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISY 289 (673)
Q Consensus 226 ~~~~~-------l~~L~~L~ls~N~l~~~~~~~~~--~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~ 289 (673)
..+.. +++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++
T Consensus 715 ~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~ 785 (876)
T 4ecn_A 715 NSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRH 785 (876)
T ss_dssp TSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCC
T ss_pred HHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCC
Confidence 22211 125555555555555 4444444 55555555555555554 344455555555555543
|
| >4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-34 Score=323.96 Aligned_cols=305 Identities=23% Similarity=0.310 Sum_probs=261.6
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCcccc-----------------CCCcccc--CCCCCCEEEcccCccccccCccccC
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSG-----------------SVPGEIG--NLMQLTNLEIDNNQLFGQIPRSLRN 62 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~-----------------~~~~~~~--~l~~L~~L~L~~n~i~~~~~~~l~~ 62 (673)
|+|++ +|+.|+++++|++|+|++|.+++ .+|..++ ++++|++|+|++|++.+.+|..|.+
T Consensus 435 N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~ 513 (876)
T 4ecn_A 435 NRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYD 513 (876)
T ss_dssp CEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGG
T ss_pred Ccccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhC
Confidence 77888 99999999999999999999998 3888887 9999999999999999999999999
Q ss_pred CCCCcEEEccCcc-ccc-cccccc-------CCCCCccEEEccCCcccccccc--CccccCCCcEEEcccCccCccCChh
Q 005864 63 LASLNRVHLEQNH-LTG-NISEVF-------GIYPNLTFLDISHNNFYGEIWS--SWGKCQQLGTLNFSMNNITGSIPPE 131 (673)
Q Consensus 63 l~~L~~L~L~~n~-i~~-~~~~~~-------~~l~~L~~L~L~~n~i~~~~~~--~~~~l~~L~~L~L~~n~l~~~~~~~ 131 (673)
+++|+.|+|++|+ +++ ..+..+ ..+++|++|+|++|.++ ..+. .++++++|+.|+|++|.++ .+| .
T Consensus 514 L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~ 590 (876)
T 4ecn_A 514 LPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-A 590 (876)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-C
T ss_pred CCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-h
Confidence 9999999999998 887 455444 45569999999999999 5566 8999999999999999999 677 8
Q ss_pred hhccccccccccccccccccCCccccCCCC-CCEEEccCccccccCCccccCCCC--CCEEEeCCCCCCCcCCccc---c
Q 005864 132 IGKLYQLHKLDFSLNQIVGEIPIELGNLKS-LNYLVLNGNKLSGNLPRVLGSLSE--LEYLDLSTNKLSGSIPETL---G 205 (673)
Q Consensus 132 l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~-L~~L~L~~n~l~~~~~~~l~~l~~--L~~L~l~~n~l~~~~~~~l---~ 205 (673)
|+.+++|+.|+|++|+++ .+|..+..+++ |+.|+|++|.++ .+|..+..++. |+.|++++|.+.+.+|... .
T Consensus 591 ~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~ 668 (876)
T 4ecn_A 591 FGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMD 668 (876)
T ss_dssp CCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTT
T ss_pred hcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhc
Confidence 999999999999999999 88888999999 999999999999 77888877654 9999999999987665322 2
Q ss_pred --ccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCC--------CcccEEEecCccccccCccc
Q 005864 206 --NLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNL--------ESLEKLNVSHNNLSGLIPSC 275 (673)
Q Consensus 206 --~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l--------~~L~~L~l~~N~l~~~~~~~ 275 (673)
.+++|+.|+|++|+++...+..+..+++|+.|+|++|.+. .+|..+... ++|+.|+|++|+++ .+|..
T Consensus 669 ~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~ 746 (876)
T 4ecn_A 669 DYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDD 746 (876)
T ss_dssp TCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGG
T ss_pred cccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHH
Confidence 3458999999999999655555668999999999999999 666654432 39999999999999 55777
Q ss_pred cc--cCCCccEEEccCccccCCCCCCcccccCccccccCCc
Q 005864 276 FE--GMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNR 314 (673)
Q Consensus 276 ~~--~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~ 314 (673)
+. .+++|+.|+|++|++++.++............+.+|+
T Consensus 747 l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~ 787 (876)
T 4ecn_A 747 FRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQR 787 (876)
T ss_dssp GSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCB
T ss_pred hhhccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCC
Confidence 76 9999999999999999954445555556666676655
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=293.30 Aligned_cols=255 Identities=29% Similarity=0.472 Sum_probs=173.9
Q ss_pred CCcEEEccCccccc--ccccccCCCCCccEEEccC-CccccccccCccccCCCcEEEcccCccCccCChhhhcccccccc
Q 005864 65 SLNRVHLEQNHLTG--NISEVFGIYPNLTFLDISH-NNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKL 141 (673)
Q Consensus 65 ~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 141 (673)
+++.|+|++|.+++ ..+..|..+++|++|+|++ |.+.+..+..++++++|++|+|++|.+++..|..+.++++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 45555555555554 4444555555555555553 55555555555555566666666666655556666666666666
Q ss_pred ccccccccccCCccccCCCCCCEEEccCccccccCCccccCCC-CCCEEEeCCCCCCCcCCccccccccccEEEccCCcC
Q 005864 142 DFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLS-ELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQF 220 (673)
Q Consensus 142 ~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~-~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 220 (673)
++++|.+++..|..+..+++|++|++++|++++.+|..+..++ +|+.|++++|.+++.+|..+..++ |+.|++++|.+
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 6666666656666666666666666666666666666666665 677777777777666676676665 77777777777
Q ss_pred ccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCc
Q 005864 221 RKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNST 300 (673)
Q Consensus 221 ~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~ 300 (673)
++..|..|..+++|+.|++++|.+++..|. +..+++|++|++++|++++..|..+..+++|+.|++++|++++.+|...
T Consensus 210 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~ 288 (313)
T 1ogq_A 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG 288 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCST
T ss_pred cCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCc
Confidence 777777777777777777777777755444 6777888888888888887778888888888888888888888787776
Q ss_pred ccccCccccccCCcCCCCCCC
Q 005864 301 GFQYDPIQALRGNRGLCGDVE 321 (673)
Q Consensus 301 ~~~~~~~~~~~~n~~~c~~~~ 321 (673)
.+.......+.+|+++||.|.
T Consensus 289 ~l~~L~~l~l~~N~~lc~~p~ 309 (313)
T 1ogq_A 289 NLQRFDVSAYANNKCLCGSPL 309 (313)
T ss_dssp TGGGSCGGGTCSSSEEESTTS
T ss_pred cccccChHHhcCCCCccCCCC
Confidence 666677777888888888764
|
| >2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=309.06 Aligned_cols=128 Identities=19% Similarity=0.213 Sum_probs=112.9
Q ss_pred CCCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccc-
Q 005864 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGN- 79 (673)
Q Consensus 1 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~- 79 (673)
.|+|++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|+|+ .+|.. .+++|++|+|++|+++++
T Consensus 30 ~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~ 106 (520)
T 2z7x_B 30 QNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALP 106 (520)
T ss_dssp SSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCC
T ss_pred CCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCcccccc
Confidence 47899888899999999999999999999888999999999999999999998 45554 899999999999999975
Q ss_pred cccccCCCCCccEEEccCCccccccccCccccCCC--cEEEcccCcc--CccCChhhhc
Q 005864 80 ISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQL--GTLNFSMNNI--TGSIPPEIGK 134 (673)
Q Consensus 80 ~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L--~~L~L~~n~l--~~~~~~~l~~ 134 (673)
.+..|..+++|++|+|++|.+++ ..+..+++| +.|++++|.+ .+..|..+..
T Consensus 107 ~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~ 162 (520)
T 2z7x_B 107 ICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQD 162 (520)
T ss_dssp CCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTT
T ss_pred chhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccc
Confidence 56899999999999999999985 457778888 9999999999 6566655554
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-33 Score=286.06 Aligned_cols=268 Identities=21% Similarity=0.220 Sum_probs=207.8
Q ss_pred CCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEcc
Q 005864 17 NLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDIS 96 (673)
Q Consensus 17 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 96 (673)
+++.++++++.++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|+++++.+..|..+++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 6788888888887 4565554 578888888888887666678888888888888888887777788888888888888
Q ss_pred CCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccc--cCCccccCCCCCCEEEccCccccc
Q 005864 97 HNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVG--EIPIELGNLKSLNYLVLNGNKLSG 174 (673)
Q Consensus 97 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~--~~~~~l~~l~~L~~L~L~~n~l~~ 174 (673)
+|.++..+...+ ++|++|++++|.+++..+..+.++++|+.|++++|.+.. ..+..+..+++|++|++++|.++.
T Consensus 109 ~n~l~~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLKELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCSBCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCCccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 888875443332 678888888888887777778888888888888888753 566777788888888888888874
Q ss_pred cCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccC
Q 005864 175 NLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICN 254 (673)
Q Consensus 175 ~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 254 (673)
+|..+. ++|+.|++++|.+++..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.++ .+|..+..
T Consensus 186 -l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 186 -IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261 (330)
T ss_dssp -CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred -CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhcc
Confidence 444332 77888888888888777778888888888888888888777777888888888888888887 67777888
Q ss_pred CCcccEEEecCccccccCccccccC------CCccEEEccCccccC
Q 005864 255 LESLEKLNVSHNNLSGLIPSCFEGM------HGLSCIDISYNELLG 294 (673)
Q Consensus 255 l~~L~~L~l~~N~l~~~~~~~~~~~------~~L~~l~l~~N~l~~ 294 (673)
+++|++|++++|++++..+..|... +.|+.+++++|++..
T Consensus 262 l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 262 HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred CCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccc
Confidence 8888888888888887777666533 677888888888764
|
| >2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-34 Score=315.31 Aligned_cols=206 Identities=24% Similarity=0.260 Sum_probs=165.5
Q ss_pred CCcEEEcccCccCccC--ChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCC-ccccCCCCCCEE
Q 005864 113 QLGTLNFSMNNITGSI--PPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLP-RVLGSLSELEYL 189 (673)
Q Consensus 113 ~L~~L~L~~n~l~~~~--~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L 189 (673)
+|+.|++++|.+++.. +..+..+++|++|++++|.+.+..+ .+..+++|++|++++|.+++..+ ..+..+++|++|
T Consensus 348 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 426 (570)
T 2z63_A 348 SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 426 (570)
T ss_dssp TCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEE
T ss_pred CCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEEEccCCccccccchhhhhcCCCCCEE
Confidence 3444444444444322 4455666777777777777764433 38888999999999999987655 578899999999
Q ss_pred EeCCCCCCCcCCccccccccccEEEccCCcCc-cCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccc
Q 005864 190 DLSTNKLSGSIPETLGNLLKVHYLNLSNNQFR-KEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNL 268 (673)
Q Consensus 190 ~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l 268 (673)
++++|.+.+..|..+..+++|+.|++++|.++ +..|..+..+++|+.|++++|.+++..|..|..+++|+.|++++|++
T Consensus 427 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 506 (570)
T 2z63_A 427 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQL 506 (570)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred eCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcC
Confidence 99999999888999999999999999999998 56888999999999999999999988899999999999999999999
Q ss_pred cccCccccccCCCccEEEccCccccCCCCCCccc-ccC--ccccccCCcCCCCCC
Q 005864 269 SGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGF-QYD--PIQALRGNRGLCGDV 320 (673)
Q Consensus 269 ~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~-~~~--~~~~~~~n~~~c~~~ 320 (673)
++..+..|..+++|+.|++++|++++.+|..... .+. ....+.+.+ .|..+
T Consensus 507 ~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~~~~~~~-~C~~~ 560 (570)
T 2z63_A 507 KSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSA-KCSGS 560 (570)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGEESCC-BBTTT
T ss_pred CCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhccccCCCch-hhCCC
Confidence 9998899999999999999999999999876544 222 122334444 66554
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=287.55 Aligned_cols=266 Identities=25% Similarity=0.252 Sum_probs=221.5
Q ss_pred CCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEcc
Q 005864 17 NLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDIS 96 (673)
Q Consensus 17 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 96 (673)
+++.++++++.++ .+|..+. ++|+.|+|++|.++...+..|.++++|++|+|++|+++++.+..|..+++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 6889999999888 5666553 688999999999887777888999999999999999988888888999999999999
Q ss_pred CCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccc--cCCccccCCCCCCEEEccCccccc
Q 005864 97 HNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVG--EIPIELGNLKSLNYLVLNGNKLSG 174 (673)
Q Consensus 97 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~--~~~~~l~~l~~L~~L~L~~n~l~~ 174 (673)
+|.++.++...+ ++|++|++++|.++...+..|..+++|+.|++++|.++. ..+..+..+ +|++|++++|++++
T Consensus 111 ~n~l~~l~~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLVEIPPNLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCCSCCSSCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCCccCcccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 998885544333 788999999999987777778889999999999998863 567777777 89999999999885
Q ss_pred cCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccC
Q 005864 175 NLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICN 254 (673)
Q Consensus 175 ~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 254 (673)
+|..+. ++|+.|++++|.+++..+..+..+++|+.|++++|++++..+..+..+++|+.|++++|.++ .+|..+..
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 444443 68889999999998777788888899999999999998887778888899999999999988 77888888
Q ss_pred CCcccEEEecCccccccCccccccC------CCccEEEccCcccc
Q 005864 255 LESLEKLNVSHNNLSGLIPSCFEGM------HGLSCIDISYNELL 293 (673)
Q Consensus 255 l~~L~~L~l~~N~l~~~~~~~~~~~------~~L~~l~l~~N~l~ 293 (673)
+++|+.|++++|++++..+..|... +.|+.|++++|++.
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSC
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCccc
Confidence 8999999999999988877777653 67889999999887
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=313.60 Aligned_cols=298 Identities=20% Similarity=0.167 Sum_probs=179.6
Q ss_pred CccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccccc
Q 005864 3 HLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISE 82 (673)
Q Consensus 3 ~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~ 82 (673)
.++...+..++++++|++|+|++|.|++..+..|+.+++|++|+|++|.+++..|..|.++++|++|+|++|.++.+++.
T Consensus 62 ~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~ 141 (597)
T 3oja_B 62 TMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRG 141 (597)
T ss_dssp EESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred CCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHH
Confidence 34444444467777788888888877777777777777888888888877777777777777888888888877777777
Q ss_pred ccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCC
Q 005864 83 VFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSL 162 (673)
Q Consensus 83 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L 162 (673)
.|..+++|++|+|++|.+++..+..|+++++|++|+|++|.+++.. +..+++|+.|++++|.+++. ...++|
T Consensus 142 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l-----~~~~~L 213 (597)
T 3oja_B 142 IFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL-----AIPIAV 213 (597)
T ss_dssp TTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEE-----ECCTTC
T ss_pred HhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccc-----cCCchh
Confidence 7777778888888888777777777777778888888887777542 34455666666666655421 222345
Q ss_pred CEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCC
Q 005864 163 NYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHN 242 (673)
Q Consensus 163 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N 242 (673)
+.|++++|.++...+.. .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|
T Consensus 214 ~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 288 (597)
T 3oja_B 214 EELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNN 288 (597)
T ss_dssp SEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTS
T ss_pred heeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCC
Confidence 55555555554322211 1355555555555553 244555555555555555555555555555555555555555
Q ss_pred cCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCcccccCccccccCCcCCC
Q 005864 243 FLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLC 317 (673)
Q Consensus 243 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c 317 (673)
.+++ +|..+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|++++..+ ..+.......+.+|++.|
T Consensus 289 ~l~~-l~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~L~~L~l~~N~~~~ 359 (597)
T 3oja_B 289 RLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLKL--STHHTLKNLTLSHNDWDC 359 (597)
T ss_dssp CCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCCC--CTTCCCSEEECCSSCEEH
T ss_pred CCCC-CCcccccCCCCcEEECCCCCCCc-cCcccccCCCCCEEECCCCCCCCcCh--hhcCCCCEEEeeCCCCCC
Confidence 5552 34444455555555555555553 24444555555555555555554432 122233334444554444
|
| >1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=294.01 Aligned_cols=253 Identities=31% Similarity=0.487 Sum_probs=212.0
Q ss_pred CCCCEEEcccCcccc--ccCccccCCCCCcEEEccC-cccccccccccCCCCCccEEEccCCccccccccCccccCCCcE
Q 005864 40 MQLTNLEIDNNQLFG--QIPRSLRNLASLNRVHLEQ-NHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGT 116 (673)
Q Consensus 40 ~~L~~L~L~~n~i~~--~~~~~l~~l~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 116 (673)
.+++.|+|++|++.+ .+|..|.++++|++|+|++ |.+.+..+..|..+++|++|+|++|.+++..+..+.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 467788888888876 6777788888888888884 7777777777788888888888888887777777888888888
Q ss_pred EEcccCccCccCChhhhccccccccccccccccccCCccccCCC-CCCEEEccCccccccCCccccCCCCCCEEEeCCCC
Q 005864 117 LNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLK-SLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNK 195 (673)
Q Consensus 117 L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~-~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 195 (673)
|+|++|.+++..|..+..+++|++|++++|++++.+|..+..++ +|+.|++++|++++..|..+..++ |+.|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 88888888877888888888888888888888878888888887 888888888888888888888876 8899999988
Q ss_pred CCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccc
Q 005864 196 LSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSC 275 (673)
Q Consensus 196 l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 275 (673)
+++..|..+..+++|+.|++++|.+++..+. +..+++|+.|++++|.+++.+|..+..+++|+.|+|++|++++.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 8888888888888999999999998865554 777889999999999998889999999999999999999999888876
Q ss_pred cccCCCccEEEccCcc-ccCC
Q 005864 276 FEGMHGLSCIDISYNE-LLGL 295 (673)
Q Consensus 276 ~~~~~~L~~l~l~~N~-l~~~ 295 (673)
..+++|+.+++++|+ ++|.
T Consensus 288 -~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 288 -GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp -TTGGGSCGGGTCSSSEEEST
T ss_pred -ccccccChHHhcCCCCccCC
Confidence 788999999999998 5553
|
| >3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-33 Score=308.84 Aligned_cols=303 Identities=21% Similarity=0.239 Sum_probs=224.6
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS 81 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 81 (673)
|+|++ +|..+. ++|++|+|++|.|++..+..|.++++|++|+|++|+|++..|.+|.++++|++|+|++|+|+.++.
T Consensus 41 ~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~ 117 (562)
T 3a79_B 41 RNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISC 117 (562)
T ss_dssp SCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECS
T ss_pred CCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCc
Confidence 55663 666664 678888888888887777778888888888888888877777778888888888888888776554
Q ss_pred cccCCCCCccEEEccCCcccccc-ccCccccCCCcEEEcccCccCccCChhhhccccc--cccccccccc--cccCCccc
Q 005864 82 EVFGIYPNLTFLDISHNNFYGEI-WSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQL--HKLDFSLNQI--VGEIPIEL 156 (673)
Q Consensus 82 ~~~~~l~~L~~L~L~~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L--~~L~l~~n~i--~~~~~~~l 156 (673)
. .+++|++|+|++|++++.. +..|+++++|++|++++|.++.. .+..+++| ++|++++|.+ ++..|..+
T Consensus 118 ~---~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l 191 (562)
T 3a79_B 118 C---PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESL 191 (562)
T ss_dssp C---CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEE
T ss_pred c---ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccc
Confidence 4 6777888888888877644 46777778888888888777643 33444444 7777777766 44444333
Q ss_pred cCCC----------------------------------------------------------------------------
Q 005864 157 GNLK---------------------------------------------------------------------------- 160 (673)
Q Consensus 157 ~~l~---------------------------------------------------------------------------- 160 (673)
..+.
T Consensus 192 ~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~ 271 (562)
T 3a79_B 192 QIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQ 271 (562)
T ss_dssp EECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHH
T ss_pred cccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHH
Confidence 3322
Q ss_pred -----CCCEEEccCccccccCCccc-----------------------------------------------------cC
Q 005864 161 -----SLNYLVLNGNKLSGNLPRVL-----------------------------------------------------GS 182 (673)
Q Consensus 161 -----~L~~L~L~~n~l~~~~~~~l-----------------------------------------------------~~ 182 (673)
+|++|++++|.+++.+|..+ ..
T Consensus 272 ~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~ 351 (562)
T 3a79_B 272 FFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPS 351 (562)
T ss_dssp HHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSS
T ss_pred hhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccC
Confidence 55666666666665554433 67
Q ss_pred CCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCC--chhhhcccCCCeEeecCCcCCCCCcc-cccCCCccc
Q 005864 183 LSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEF--PVELEKLVQLSELDLSHNFLGGEIPP-QICNLESLE 259 (673)
Q Consensus 183 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~ls~N~l~~~~~~-~~~~l~~L~ 259 (673)
+++|++|++++|.+++..|..+..+++|+.|++++|++++.. |..+..+++|+.|++++|.+++.+|. .+..+++|+
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 789999999999999888889999999999999999998743 46688899999999999999874554 578889999
Q ss_pred EEEecCccccccCccccccCCCccEEEccCccccCCCCCCcccccCccccccCCcC
Q 005864 260 KLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRG 315 (673)
Q Consensus 260 ~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~ 315 (673)
.|++++|++++..|..+. ++|+.|++++|+++..++............+.+|.-
T Consensus 432 ~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l 485 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQL 485 (562)
T ss_dssp EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCC
T ss_pred EEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCC
Confidence 999999999877665543 689999999999997666666666666667777653
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=311.76 Aligned_cols=134 Identities=18% Similarity=0.175 Sum_probs=90.4
Q ss_pred CCCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccc-
Q 005864 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGN- 79 (673)
Q Consensus 1 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~- 79 (673)
+|+|++..|.+|+++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|+++++
T Consensus 35 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 114 (549)
T 2z81_A 35 FNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLG 114 (549)
T ss_dssp SSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSC
T ss_pred CCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccc
Confidence 3567766677777777777777777777766667777777777777777777766666677777777777777777653
Q ss_pred cccccCCCCCccEEEccCCc-cccccccCccccCCCcEEEcccCccCccCChhhhc
Q 005864 80 ISEVFGIYPNLTFLDISHNN-FYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGK 134 (673)
Q Consensus 80 ~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 134 (673)
.+..|..+++|++|++++|. +..+.+..+.++++|++|++++|.+++..|..+..
T Consensus 115 ~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 170 (549)
T 2z81_A 115 VTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS 170 (549)
T ss_dssp SSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT
T ss_pred hhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhc
Confidence 23456667777777777766 44444456666677777777777666655555443
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-33 Score=310.81 Aligned_cols=139 Identities=27% Similarity=0.322 Sum_probs=116.0
Q ss_pred ccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCc-cCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcc
Q 005864 180 LGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFR-KEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESL 258 (673)
Q Consensus 180 l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L 258 (673)
+..+++++.++++.|.+.+..+..+..+++|+.|++++|.+. +..|..|..+++|+.|+|++|++++..|..|.++++|
T Consensus 441 ~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L 520 (635)
T 4g8a_A 441 FLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 520 (635)
T ss_dssp TTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred cccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCC
Confidence 344455566666666666666667777888899999988754 4567889999999999999999998889999999999
Q ss_pred cEEEecCccccccCccccccCCCccEEEccCccccCCCCCCccc--ccCccccccCCcCCCC
Q 005864 259 EKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGF--QYDPIQALRGNRGLCG 318 (673)
Q Consensus 259 ~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~--~~~~~~~~~~n~~~c~ 318 (673)
++|+|++|+|++..+..|..+++|+.|+|++|++++.+|..... .......+.+||+.|+
T Consensus 521 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 521 QVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp CEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 99999999999999999999999999999999999999875542 3466778999999995
|
| >3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-33 Score=293.45 Aligned_cols=301 Identities=22% Similarity=0.182 Sum_probs=259.9
Q ss_pred CCCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccc
Q 005864 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI 80 (673)
Q Consensus 1 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~ 80 (673)
.|+|++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|+++...+..|..+++|++|+|++|+++++.
T Consensus 78 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~ 157 (390)
T 3o6n_A 78 DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIE 157 (390)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCC
T ss_pred CCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccC
Confidence 37888888889999999999999999999988999999999999999999999665666899999999999999999999
Q ss_pred ccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCC
Q 005864 81 SEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLK 160 (673)
Q Consensus 81 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~ 160 (673)
+..|..+++|++|++++|.+++. .+..+++|+.|++++|.++.. ...++|++|++++|.+... +.. ..+
T Consensus 158 ~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~--~~~ 226 (390)
T 3o6n_A 158 DDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGP--VNV 226 (390)
T ss_dssp TTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC--CCS
T ss_pred hhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc-----CCCCcceEEECCCCeeeec-ccc--ccc
Confidence 99999999999999999999865 467789999999999998853 3446899999999999854 332 347
Q ss_pred CCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeec
Q 005864 161 SLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLS 240 (673)
Q Consensus 161 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls 240 (673)
+|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..|..+++|+.|++++|++++ .+..+..+++|+.|+++
T Consensus 227 ~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~ 303 (390)
T 3o6n_A 227 ELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLS 303 (390)
T ss_dssp SCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECC
T ss_pred cccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECC
Confidence 999999999999954 578999999999999999998889999999999999999999986 45666788999999999
Q ss_pred CCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCcccccCccccccCCcCCCCCC
Q 005864 241 HNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCGDV 320 (673)
Q Consensus 241 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 320 (673)
+|++. .+|..+..+++|+.|++++|++++.. +..+++|+.|++++|++.+..... .+.......+.+++..|+.+
T Consensus 304 ~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~~~~~~-~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 304 HNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLRA-LFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp SSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHHH-HTTTCCTTTBCCCCSCCCTT
T ss_pred CCcce-ecCccccccCcCCEEECCCCccceeC---chhhccCCEEEcCCCCccchhHHH-HHHHHHhhcccccCceeccc
Confidence 99998 67778899999999999999998763 678899999999999998754321 12233344566777777654
|
| >1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-33 Score=313.18 Aligned_cols=291 Identities=25% Similarity=0.298 Sum_probs=138.0
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS 81 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 81 (673)
|+|++..+..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.++...+.+|.++++|++|+|++|+++++++
T Consensus 35 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~ 114 (680)
T 1ziw_A 35 NQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKN 114 (680)
T ss_dssp SCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCS
T ss_pred CCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccCh
Confidence 34444444445555555555555555554444445555555555555555543333345555555555555555554444
Q ss_pred cccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhh--ccccccccccccccccccCCccccCC
Q 005864 82 EVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIG--KLYQLHKLDFSLNQIVGEIPIELGNL 159 (673)
Q Consensus 82 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~--~l~~L~~L~l~~n~i~~~~~~~l~~l 159 (673)
..|..+++|++|+|++|.+++..+..+.++++|++|++++|.+++..+..+. .+++|++|++++|.+++..+..+..+
T Consensus 115 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l 194 (680)
T 1ziw_A 115 NPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAI 194 (680)
T ss_dssp CTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGS
T ss_pred hHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhh
Confidence 4455555555555555555444444444555555555555555444433332 22445555555555544444333322
Q ss_pred ---------------------------CCCCEEEccCccccccCCccccCCCC--CCEEEeCCCCCCCcCCccccccccc
Q 005864 160 ---------------------------KSLNYLVLNGNKLSGNLPRVLGSLSE--LEYLDLSTNKLSGSIPETLGNLLKV 210 (673)
Q Consensus 160 ---------------------------~~L~~L~L~~n~l~~~~~~~l~~l~~--L~~L~l~~n~l~~~~~~~l~~l~~L 210 (673)
++|+.|++++|.+++..+..|..++. |+.|++++|.+++..|..|..+++|
T Consensus 195 ~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 274 (680)
T 1ziw_A 195 GRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQL 274 (680)
T ss_dssp SEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred hhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccc
Confidence 23344444444444444444443322 5555555554444444444444455
Q ss_pred cEEEccCCcCccCCchhhhcccCCCeEeecCCcCCC-----CCcc----cccCCCcccEEEecCccccccCccccccCCC
Q 005864 211 HYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGG-----EIPP----QICNLESLEKLNVSHNNLSGLIPSCFEGMHG 281 (673)
Q Consensus 211 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~-----~~~~----~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~ 281 (673)
+.|++++|++++..|..|..+++|+.|++++|...+ .+|. .|..+++|++|++++|.+++..+..|..+++
T Consensus 275 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 354 (680)
T 1ziw_A 275 EYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLIN 354 (680)
T ss_dssp CEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTT
T ss_pred cEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccC
Confidence 555555555444444444444444444444443321 1111 3444555555555555555555555555555
Q ss_pred ccEEEccCccc
Q 005864 282 LSCIDISYNEL 292 (673)
Q Consensus 282 L~~l~l~~N~l 292 (673)
|++|++++|.+
T Consensus 355 L~~L~Ls~n~~ 365 (680)
T 1ziw_A 355 LKYLSLSNSFT 365 (680)
T ss_dssp CCEEECTTCBS
T ss_pred CcEEECCCCch
Confidence 55555555543
|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-33 Score=309.52 Aligned_cols=302 Identities=22% Similarity=0.184 Sum_probs=264.0
Q ss_pred CCCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccc
Q 005864 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI 80 (673)
Q Consensus 1 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~ 80 (673)
.|+|++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.++...+..|.++++|++|+|++|.+++++
T Consensus 84 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~ 163 (597)
T 3oja_B 84 DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIE 163 (597)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCC
T ss_pred CCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCC
Confidence 47899988999999999999999999999999999999999999999999999776777899999999999999999999
Q ss_pred ccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCC
Q 005864 81 SEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLK 160 (673)
Q Consensus 81 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~ 160 (673)
+..|..+++|++|+|++|.+++. .+..+++|+.|++++|.+++. ...++|+.|++++|.+....+ .+ .+
T Consensus 164 ~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~-~~--~~ 232 (597)
T 3oja_B 164 DDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVVRG-PV--NV 232 (597)
T ss_dssp TTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCCEEEC-SC--CS
T ss_pred hhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCccccc-----cCCchhheeeccCCccccccc-cc--CC
Confidence 99999999999999999999865 366789999999999998853 445689999999999985433 22 37
Q ss_pred CCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeec
Q 005864 161 SLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLS 240 (673)
Q Consensus 161 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls 240 (673)
+|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++ +|..+..+++|+.|+|+
T Consensus 233 ~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls 309 (597)
T 3oja_B 233 ELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLS 309 (597)
T ss_dssp CCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECC
T ss_pred CCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECC
Confidence 99999999999995 3678999999999999999998889999999999999999999997 46677789999999999
Q ss_pred CCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCcccccCccccccCCcCCCCCC
Q 005864 241 HNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCGDV 320 (673)
Q Consensus 241 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 320 (673)
+|.+. .+|..+..+++|+.|+|++|.+++.. +..+++|+.|++++|++.+..... .+.......+.++...|+.+
T Consensus 310 ~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~~~-~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 310 HNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSLRA-LFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp SSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHHHH-HTTTCCTTTBCCCCCCCCTT
T ss_pred CCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhHHH-HHHHHhhhccccccccCCcc
Confidence 99999 78888999999999999999998763 677899999999999998764332 22333445677888889875
Q ss_pred C
Q 005864 321 E 321 (673)
Q Consensus 321 ~ 321 (673)
.
T Consensus 385 ~ 385 (597)
T 3oja_B 385 Y 385 (597)
T ss_dssp C
T ss_pred h
Confidence 3
|
| >2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-32 Score=281.00 Aligned_cols=279 Identities=22% Similarity=0.249 Sum_probs=215.0
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS 81 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 81 (673)
|.++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|++++..|.+|..+++|++|+|++|+++.++.
T Consensus 43 ~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~ 119 (332)
T 2ft3_A 43 LGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPP 119 (332)
T ss_dssp SCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSCCS
T ss_pred CCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCccCc
Confidence 3444 5666664 678888888888887777788888888888888888887777888888888888888888886665
Q ss_pred cccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCc--cCChhhhccccccccccccccccccCCccccCC
Q 005864 82 EVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITG--SIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNL 159 (673)
Q Consensus 82 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l 159 (673)
..+ ++|++|++++|.++...+..+.++++|+.|++++|.++. ..+..+..+ +|+.|++++|++++ +|..+.
T Consensus 120 ~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~-- 192 (332)
T 2ft3_A 120 NLP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP-- 192 (332)
T ss_dssp SCC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--
T ss_pred ccc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--
Confidence 544 678888888888887777778888888888888888853 566677777 88888888888874 555443
Q ss_pred CCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEee
Q 005864 160 KSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDL 239 (673)
Q Consensus 160 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 239 (673)
++|++|++++|.+++..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|+++ .+|..+..+++|+.|++
T Consensus 193 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l 271 (332)
T 2ft3_A 193 ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYL 271 (332)
T ss_dssp SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEEC
Confidence 68888888888888777777888888888888888888777777888888888888888887 46667888888888888
Q ss_pred cCCcCCCCCcccccC------CCcccEEEecCcccc--ccCccccccCCCccEEEccCcc
Q 005864 240 SHNFLGGEIPPQICN------LESLEKLNVSHNNLS--GLIPSCFEGMHGLSCIDISYNE 291 (673)
Q Consensus 240 s~N~l~~~~~~~~~~------l~~L~~L~l~~N~l~--~~~~~~~~~~~~L~~l~l~~N~ 291 (673)
++|++++..+..|.. ..+|+.|++++|++. +..|..|..+++|+.+++++|+
T Consensus 272 ~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 272 HTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 888888666666654 356888888888877 5677778888888888888774
|
| >1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-32 Score=278.02 Aligned_cols=279 Identities=22% Similarity=0.248 Sum_probs=231.9
Q ss_pred CccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccccc
Q 005864 3 HLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISE 82 (673)
Q Consensus 3 ~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~ 82 (673)
.++ .+|..+. +.++.|+|++|.+++..+..|+++++|++|+|++|++++..|..|.++++|++|+|++|+++.++..
T Consensus 42 ~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~ 118 (330)
T 1xku_A 42 GLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEK 118 (330)
T ss_dssp CCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSS
T ss_pred Ccc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCccChh
Confidence 344 5666664 6889999999999988777899999999999999999887788899999999999999999876655
Q ss_pred ccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCc--cCChhhhccccccccccccccccccCCccccCCC
Q 005864 83 VFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITG--SIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLK 160 (673)
Q Consensus 83 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~ 160 (673)
.+ ++|++|++++|.+++..+..+.++++|+.|++++|.++. ..+..+..+++|++|++++|.++ .+|..+. +
T Consensus 119 ~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~ 192 (330)
T 1xku_A 119 MP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--P 192 (330)
T ss_dssp CC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--T
T ss_pred hc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--c
Confidence 44 789999999999988888888899999999999998864 66778888999999999999987 4555544 7
Q ss_pred CCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeec
Q 005864 161 SLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLS 240 (673)
Q Consensus 161 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls 240 (673)
+|++|++++|++++..+..|..+++|+.|++++|.+++..+..+..+++|+.|++++|+++ .+|..+..+++|+.|+++
T Consensus 193 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~ 271 (330)
T 1xku_A 193 SLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLH 271 (330)
T ss_dssp TCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECC
T ss_pred cCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECC
Confidence 8999999999999888888999999999999999998777778888999999999999998 567788888999999999
Q ss_pred CCcCCCCCcccccC------CCcccEEEecCccccc--cCccccccCCCccEEEccCcc
Q 005864 241 HNFLGGEIPPQICN------LESLEKLNVSHNNLSG--LIPSCFEGMHGLSCIDISYNE 291 (673)
Q Consensus 241 ~N~l~~~~~~~~~~------l~~L~~L~l~~N~l~~--~~~~~~~~~~~L~~l~l~~N~ 291 (673)
+|++++..+..|.. ...|+.|++++|++.. ..|..|..++.++.+++++|+
T Consensus 272 ~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 272 NNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 99998776666654 3778899999998864 567788889999999998884
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-32 Score=280.14 Aligned_cols=290 Identities=23% Similarity=0.374 Sum_probs=223.9
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS 81 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 81 (673)
|.++. +| .+..+++|++|+|++|.+++..+ +..+++|++|++++|.++.. .++..+++|++|++++|.+....+
T Consensus 54 ~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l~~n~i~~~~~ 127 (347)
T 4fmz_A 54 EKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNEDNISDISP 127 (347)
T ss_dssp SCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEECTTSCCCCCGG
T ss_pred Ccccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEECcCCcccCchh
Confidence 34443 33 47788888888888888885433 88888888888888888743 358888888888888888886654
Q ss_pred cccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCC
Q 005864 82 EVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKS 161 (673)
Q Consensus 82 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~ 161 (673)
+..+++|++|++++|..... ...+..+++|+.|++++|.+....+ +..+++|++|++++|.+.+..+ +..+++
T Consensus 128 --~~~l~~L~~L~l~~n~~~~~-~~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~ 200 (347)
T 4fmz_A 128 --LANLTKMYSLNLGANHNLSD-LSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTS 200 (347)
T ss_dssp --GTTCTTCCEEECTTCTTCCC-CGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTT
T ss_pred --hccCCceeEEECCCCCCccc-ccchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCc
Confidence 77888888888888855432 3347788888888888888875433 7788888888888888874332 778888
Q ss_pred CCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecC
Q 005864 162 LNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241 (673)
Q Consensus 162 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~ 241 (673)
|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++. ..+..+++|+.|++++
T Consensus 201 L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~ 274 (347)
T 4fmz_A 201 LHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGS 274 (347)
T ss_dssp CCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCS
T ss_pred cceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccC
Confidence 8888888888885443 7788899999999999885433 88888999999999988864 4678888999999999
Q ss_pred CcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCcccccCccccccCC
Q 005864 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGN 313 (673)
Q Consensus 242 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n 313 (673)
|.+++. ..+..+++|+.|++++|++++..+..+..+++|++|++++|++++.+| ...+.......+.+|
T Consensus 275 n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N 343 (347)
T 4fmz_A 275 NQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQ 343 (347)
T ss_dssp SCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC
T ss_pred CccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC-hhhhhccceeehhhh
Confidence 998854 457888999999999999988888888899999999999999888776 334444444455554
|
| >2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-32 Score=302.29 Aligned_cols=309 Identities=21% Similarity=0.244 Sum_probs=233.6
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS 81 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 81 (673)
|.++ .+|+.+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|.+|.++++|++|+|++|++++.++
T Consensus 15 ~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 91 (549)
T 2z81_A 15 RSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSS 91 (549)
T ss_dssp SCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCH
T ss_pred Cccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCH
Confidence 4566 6787775 799999999999999889999999999999999999998888999999999999999999999999
Q ss_pred cccCCCCCccEEEccCCccccc-cccCccccCCCcEEEcccCc-cCccCChhhhccccccccccccccccccCCccccCC
Q 005864 82 EVFGIYPNLTFLDISHNNFYGE-IWSSWGKCQQLGTLNFSMNN-ITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNL 159 (673)
Q Consensus 82 ~~~~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~-l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l 159 (673)
..|..+++|++|+|++|.+++. .+..++++++|++|++++|. +....+..+.++++|++|++++|.+++..|..+..+
T Consensus 92 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l 171 (549)
T 2z81_A 92 SWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSI 171 (549)
T ss_dssp HHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTC
T ss_pred HHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhcc
Confidence 8999999999999999999864 35789999999999999998 554455789999999999999999998888888877
Q ss_pred CCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcC--Ccc----------------------------------
Q 005864 160 KSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSI--PET---------------------------------- 203 (673)
Q Consensus 160 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~--~~~---------------------------------- 203 (673)
++|++|++++|.+.......+..+++|++|++++|.+++.. +..
T Consensus 172 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~ 251 (549)
T 2z81_A 172 RDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYIL 251 (549)
T ss_dssp SEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCT
T ss_pred ccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhc
Confidence 77777777766665322222344566666666666655421 000
Q ss_pred ------------------------------------------------------ccccccccEEEccCCcCccCCchhh-
Q 005864 204 ------------------------------------------------------LGNLLKVHYLNLSNNQFRKEFPVEL- 228 (673)
Q Consensus 204 ------------------------------------------------------l~~l~~L~~L~l~~n~l~~~~~~~~- 228 (673)
+...++|+.|++++|.++. +|..+
T Consensus 252 ~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~-ip~~~~ 330 (549)
T 2z81_A 252 ELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFL-VPCSFS 330 (549)
T ss_dssp TCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCC-CCHHHH
T ss_pred cccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCcccc-CCHHHH
Confidence 0112346666666666653 44443
Q ss_pred hcccCCCeEeecCCcCCCCCcc---cccCCCcccEEEecCccccccCc--cccccCCCccEEEccCccccCCCCCCcccc
Q 005864 229 EKLVQLSELDLSHNFLGGEIPP---QICNLESLEKLNVSHNNLSGLIP--SCFEGMHGLSCIDISYNELLGLIPNSTGFQ 303 (673)
Q Consensus 229 ~~l~~L~~L~ls~N~l~~~~~~---~~~~l~~L~~L~l~~N~l~~~~~--~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~ 303 (673)
..+++|+.|++++|.+.+.+|. .++.+++|+.|++++|++++..+ ..+..+++|++|++++|+++..++......
T Consensus 331 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~ 410 (549)
T 2z81_A 331 QHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPE 410 (549)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCCCCSCCCCCT
T ss_pred hcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCccCChhhcccc
Confidence 5678888888888888765543 36677888888888888876643 457778888888888888875444333333
Q ss_pred cCccccccCCc
Q 005864 304 YDPIQALRGNR 314 (673)
Q Consensus 304 ~~~~~~~~~n~ 314 (673)
......+.+|.
T Consensus 411 ~L~~L~Ls~N~ 421 (549)
T 2z81_A 411 KMRFLNLSSTG 421 (549)
T ss_dssp TCCEEECTTSC
T ss_pred cccEEECCCCC
Confidence 34444455543
|
| >4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-31 Score=276.01 Aligned_cols=271 Identities=26% Similarity=0.423 Sum_probs=236.4
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS 81 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 81 (673)
|+|++. |. +.++++|++|+|++|.+++. ..|.++++|++|++++|.+.+..+ +..+++|++|++++|......
T Consensus 76 n~i~~~-~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~- 148 (347)
T 4fmz_A 76 NQITDI-SP-LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDL- 148 (347)
T ss_dssp SCCCCC-GG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC-
T ss_pred Cccccc-hh-hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCcccc-
Confidence 677754 33 99999999999999999953 469999999999999999985433 899999999999999655443
Q ss_pred cccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCC
Q 005864 82 EVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKS 161 (673)
Q Consensus 82 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~ 161 (673)
..+..+++|++|++++|.+....+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+.+..+ +..+++
T Consensus 149 ~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~ 222 (347)
T 4fmz_A 149 SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTR 222 (347)
T ss_dssp GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTT
T ss_pred cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCc
Confidence 348999999999999999986554 8899999999999999995433 8899999999999999985443 888999
Q ss_pred CCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecC
Q 005864 162 LNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241 (673)
Q Consensus 162 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~ 241 (673)
|++|++++|.+++..+ +..+++|++|++++|.+++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++
T Consensus 223 L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~ 296 (347)
T 4fmz_A 223 LNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNN 296 (347)
T ss_dssp CCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCS
T ss_pred CCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcC
Confidence 9999999999995543 88999999999999999853 5688999999999999999975 4688999999999999
Q ss_pred CcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCcccc
Q 005864 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELL 293 (673)
Q Consensus 242 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~ 293 (673)
|.+++..+..+..+++|+.|++++|++++..| +..+++|++|++++|+++
T Consensus 297 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 297 NQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp SCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 99998888999999999999999999998876 889999999999999986
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1.9e-31 Score=287.52 Aligned_cols=264 Identities=32% Similarity=0.419 Sum_probs=146.7
Q ss_pred cccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCc
Q 005864 11 SVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNL 90 (673)
Q Consensus 11 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 90 (673)
.+..+++|++|+|++|.+++..+ +.++++|++|++++|.+.+..+ +.++++|++|+|++|.++++.+ +..+++|
T Consensus 63 ~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 136 (466)
T 1o6v_A 63 GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNL 136 (466)
T ss_dssp TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTC
T ss_pred chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCC
Confidence 36667777777777777764433 6677777777777777664433 6667777777777776665543 6666666
Q ss_pred cEEEccCCccccccc-------------------cCccccCCCcEEEcccCccCccCChhhhcccccccccccccccccc
Q 005864 91 TFLDISHNNFYGEIW-------------------SSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGE 151 (673)
Q Consensus 91 ~~L~L~~n~i~~~~~-------------------~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~ 151 (673)
++|++++|.+.+... ..+.++++|+.|++++|.++.. ..+..+++|++|++++|.+.+.
T Consensus 137 ~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~ 214 (466)
T 1o6v_A 137 NRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDI 214 (466)
T ss_dssp SEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC
T ss_pred CEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccc
Confidence 666666666554221 1244556666666666666633 3456666666666666666543
Q ss_pred CCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcc
Q 005864 152 IPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKL 231 (673)
Q Consensus 152 ~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l 231 (673)
.+ +..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+
T Consensus 215 ~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l 286 (466)
T 1o6v_A 215 TP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGL 286 (466)
T ss_dssp GG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred cc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCC
Confidence 33 44455566666666555532 234555555555555555553322 4455555555555555554322 4445
Q ss_pred cCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccC
Q 005864 232 VQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLG 294 (673)
Q Consensus 232 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~ 294 (673)
++|+.|++++|.+.+..+ +..+++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 287 ~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 287 TALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp TTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred CccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCC
Confidence 555555555555543322 4445555555555555544433 3444455555555554444
|
| >1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=280.83 Aligned_cols=294 Identities=28% Similarity=0.387 Sum_probs=235.6
Q ss_pred CCCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccc
Q 005864 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI 80 (673)
Q Consensus 1 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~ 80 (673)
.|+|++..| +.++++|++|+|++|.+++..+ +.++++|++|++++|.+++..+ +..+++|++|++++|.+.++.
T Consensus 77 ~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~ 150 (466)
T 1o6v_A 77 NNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDIS 150 (466)
T ss_dssp SSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCG
T ss_pred CCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCCh
Confidence 366775543 8888888888888888885544 8888888888888888875433 788888888888888877543
Q ss_pred c-------------------cccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhcccccccc
Q 005864 81 S-------------------EVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKL 141 (673)
Q Consensus 81 ~-------------------~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 141 (673)
. ..+..+++|++|++++|.++.. ..+..+++|++|++++|.+++..+ ++.+++|++|
T Consensus 151 ~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 226 (466)
T 1o6v_A 151 ALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDEL 226 (466)
T ss_dssp GGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEE
T ss_pred hhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEE
Confidence 2 2367788999999999998764 458889999999999999986544 7788999999
Q ss_pred ccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCc
Q 005864 142 DFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFR 221 (673)
Q Consensus 142 ~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 221 (673)
++++|.+++. ..+..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|+++
T Consensus 227 ~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~ 300 (466)
T 1o6v_A 227 SLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLE 300 (466)
T ss_dssp ECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCS
T ss_pred ECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCccc
Confidence 9999998743 467888999999999999986544 8888999999999999985443 788899999999999998
Q ss_pred cCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCcc
Q 005864 222 KEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTG 301 (673)
Q Consensus 222 ~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~ 301 (673)
+..+ +..+++|+.|++++|.+++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|++++.+| ...
T Consensus 301 ~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~ 373 (466)
T 1o6v_A 301 DISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP-LAN 373 (466)
T ss_dssp CCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG-GTT
T ss_pred Cchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch-hhc
Confidence 7544 7888999999999999987655 78889999999999999876 468889999999999999988877 444
Q ss_pred cccCccccccCCcCCC
Q 005864 302 FQYDPIQALRGNRGLC 317 (673)
Q Consensus 302 ~~~~~~~~~~~n~~~c 317 (673)
........+.+|++..
T Consensus 374 l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 374 LTRITQLGLNDQAWTN 389 (466)
T ss_dssp CTTCCEEECCCEEEEC
T ss_pred CCCCCEEeccCCcccC
Confidence 4555555666665543
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.1e-32 Score=279.99 Aligned_cols=282 Identities=18% Similarity=0.146 Sum_probs=234.1
Q ss_pred CCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEE
Q 005864 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFL 93 (673)
Q Consensus 14 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 93 (673)
.++.....++++++++ .+|..+. ++|++|++++|++++..+..|.++++|++|+|++|+++++.+..|..+++|++|
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 4456667888899998 5566554 489999999999987767789999999999999999998888889999999999
Q ss_pred EccCCccccccccCccccCCCcEEEcccCccCccCC-hhhhccccccccccccc-cccccCCccccCCCCCCEEEccCcc
Q 005864 94 DISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIP-PEIGKLYQLHKLDFSLN-QIVGEIPIELGNLKSLNYLVLNGNK 171 (673)
Q Consensus 94 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~n-~i~~~~~~~l~~l~~L~~L~L~~n~ 171 (673)
+|++|++++..+..+.++++|++|++++|.++...+ ..+..+++|++|++++| .+....+..+..+++|++|++++|.
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 999999987777778889999999999999985544 47888999999999998 4776667788899999999999999
Q ss_pred ccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhh---cccCCCeEeecCCcCCC--
Q 005864 172 LSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELE---KLVQLSELDLSHNFLGG-- 246 (673)
Q Consensus 172 l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~---~l~~L~~L~ls~N~l~~-- 246 (673)
+++..+..+..+++|++|++++|.++...+..+..+++|+.|++++|.+++..+..+. ....++.+++++|.+.+
T Consensus 186 l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~ 265 (353)
T 2z80_A 186 LQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDES 265 (353)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHH
T ss_pred cCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcc
Confidence 9988888899999999999999998744333455688999999999999876555443 35678889999998876
Q ss_pred --CCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCC
Q 005864 247 --EIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPN 298 (673)
Q Consensus 247 --~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~ 298 (673)
.+|..+..+++|+.|++++|+++.+.+..|..+++|++|++++|++.+.+|.
T Consensus 266 l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 266 LFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp HHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred hhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCCC
Confidence 3677788999999999999999977666678999999999999999998763
|
| >4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=293.30 Aligned_cols=299 Identities=21% Similarity=0.233 Sum_probs=249.4
Q ss_pred CCCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccc
Q 005864 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI 80 (673)
Q Consensus 1 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~ 80 (673)
+|+|++..|.+|+++++|++|+|++|+|+++.+++|.++++|++|+|++|+|+...+..|.++++|++|+|++|++++++
T Consensus 61 ~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~ 140 (635)
T 4g8a_A 61 FNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE 140 (635)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCST
T ss_pred CCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCC
Confidence 58999888899999999999999999999888999999999999999999999877788999999999999999999999
Q ss_pred ccccCCCCCccEEEccCCccccc-cccCccccCCCcEEEcccCccCccCChhhhccc-----------------------
Q 005864 81 SEVFGIYPNLTFLDISHNNFYGE-IWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLY----------------------- 136 (673)
Q Consensus 81 ~~~~~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~----------------------- 136 (673)
+..|+++++|++|+|++|.++.. .+..++.+++|++|++++|++++..+..+..+.
T Consensus 141 ~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~ 220 (635)
T 4g8a_A 141 NFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGA 220 (635)
T ss_dssp TCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTT
T ss_pred hhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCccc
Confidence 89999999999999999999864 467788999999999999988765444332221
Q ss_pred --------------------------------------------------------------------------------
Q 005864 137 -------------------------------------------------------------------------------- 136 (673)
Q Consensus 137 -------------------------------------------------------------------------------- 136 (673)
T Consensus 221 ~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 300 (635)
T 4g8a_A 221 FKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIID 300 (635)
T ss_dssp TTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTT
T ss_pred ccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhh
Confidence
Q ss_pred -----------------------------------------------------------------------ccccccccc
Q 005864 137 -----------------------------------------------------------------------QLHKLDFSL 145 (673)
Q Consensus 137 -----------------------------------------------------------------------~L~~L~l~~ 145 (673)
+|+.|++++
T Consensus 301 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~ 380 (635)
T 4g8a_A 301 LFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSR 380 (635)
T ss_dssp TTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCS
T ss_pred hhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhc
Confidence 122222222
Q ss_pred cccccc--------------------------------------------------CCccccCCCCCCEEEccCcccccc
Q 005864 146 NQIVGE--------------------------------------------------IPIELGNLKSLNYLVLNGNKLSGN 175 (673)
Q Consensus 146 n~i~~~--------------------------------------------------~~~~l~~l~~L~~L~L~~n~l~~~ 175 (673)
|.+... .+..+..+++++.++++.|.+.+.
T Consensus 381 n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~ 460 (635)
T 4g8a_A 381 NGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVA 460 (635)
T ss_dssp SCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEEC
T ss_pred cccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccc
Confidence 221100 001123334555556666666666
Q ss_pred CCccccCCCCCCEEEeCCCCC-CCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccC
Q 005864 176 LPRVLGSLSELEYLDLSTNKL-SGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICN 254 (673)
Q Consensus 176 ~~~~l~~l~~L~~L~l~~n~l-~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 254 (673)
.+..+..+++|+.|++++|.+ .+..|..|..+++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..+..|.+
T Consensus 461 ~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~ 540 (635)
T 4g8a_A 461 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 540 (635)
T ss_dssp CTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTT
T ss_pred cccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhC
Confidence 677888899999999999985 4467889999999999999999999999999999999999999999999888889999
Q ss_pred CCcccEEEecCccccccCccccccC-CCccEEEccCccccCCCCCC
Q 005864 255 LESLEKLNVSHNNLSGLIPSCFEGM-HGLSCIDISYNELLGLIPNS 299 (673)
Q Consensus 255 l~~L~~L~l~~N~l~~~~~~~~~~~-~~L~~l~l~~N~l~~~~~~~ 299 (673)
+++|+.|+|++|+|++..|..+..+ ++|+.|+|++|+|.+.+.-.
T Consensus 541 l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~ 586 (635)
T 4g8a_A 541 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQ 586 (635)
T ss_dssp CTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGH
T ss_pred CCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcH
Confidence 9999999999999999999999998 68999999999999987643
|
| >2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-31 Score=272.96 Aligned_cols=268 Identities=21% Similarity=0.236 Sum_probs=234.6
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS 81 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 81 (673)
|+++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|++++..+.+|.++++|++|+|++|+++++++
T Consensus 41 ~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 117 (353)
T 2z80_A 41 GSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSS 117 (353)
T ss_dssp TTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCH
T ss_pred CCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCH
Confidence 4566 6777775 599999999999998888899999999999999999998888899999999999999999999888
Q ss_pred cccCCCCCccEEEccCCccccccc-cCccccCCCcEEEcccC-ccCccCChhhhccccccccccccccccccCCccccCC
Q 005864 82 EVFGIYPNLTFLDISHNNFYGEIW-SSWGKCQQLGTLNFSMN-NITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNL 159 (673)
Q Consensus 82 ~~~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n-~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l 159 (673)
..|..+++|++|+|++|+++.+.. ..+.++++|++|++++| .++...+..+..+++|++|++++|.+++..|..+..+
T Consensus 118 ~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l 197 (353)
T 2z80_A 118 SWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSI 197 (353)
T ss_dssp HHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTC
T ss_pred hHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhcc
Confidence 889999999999999999997766 68999999999999999 5787778899999999999999999998889999999
Q ss_pred CCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCcccc---ccccccEEEccCCcCcc----CCchhhhccc
Q 005864 160 KSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLG---NLLKVHYLNLSNNQFRK----EFPVELEKLV 232 (673)
Q Consensus 160 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~---~l~~L~~L~l~~n~l~~----~~~~~~~~l~ 232 (673)
++|++|++++|.++......+..+++|+.|++++|.+++..+..+. ....++.++++++.+++ .+|..+..++
T Consensus 198 ~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~ 277 (353)
T 2z80_A 198 QNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQIS 277 (353)
T ss_dssp SEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCT
T ss_pred ccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhccc
Confidence 9999999999999855444556789999999999999876555443 35678889999998876 3577788999
Q ss_pred CCCeEeecCCcCCCCCccc-ccCCCcccEEEecCccccccCc
Q 005864 233 QLSELDLSHNFLGGEIPPQ-ICNLESLEKLNVSHNNLSGLIP 273 (673)
Q Consensus 233 ~L~~L~ls~N~l~~~~~~~-~~~l~~L~~L~l~~N~l~~~~~ 273 (673)
+|+.|++++|+++ .+|.. |..+++|++|++++|++.+..|
T Consensus 278 ~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 278 GLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp TCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 9999999999999 55555 6899999999999999987644
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=264.98 Aligned_cols=250 Identities=25% Similarity=0.266 Sum_probs=138.1
Q ss_pred CEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccc--ccccCCCCCccEEEcc
Q 005864 19 KGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI--SEVFGIYPNLTFLDIS 96 (673)
Q Consensus 19 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~--~~~~~~l~~L~~L~L~ 96 (673)
+.++++++.++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|+++... +..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 46677777776 4444433 46777777777776444445667777777777777766332 3445556667777777
Q ss_pred CCccccccccCccccCCCcEEEcccCccCccCC-hhhhccccccccccccccccccCCccccCCCCCCEEEccCccccc-
Q 005864 97 HNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIP-PEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSG- 174 (673)
Q Consensus 97 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~- 174 (673)
+|.+... +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.+..+..+..+++|++|++++|.+++
T Consensus 87 ~n~i~~l-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEEEE-EEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCccccC-hhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 7666532 3345566666666666666654333 345555555555555555554444445555555555555555543
Q ss_pred cCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccC
Q 005864 175 NLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICN 254 (673)
Q Consensus 175 ~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 254 (673)
..|..+..+++|+.|++++|.+ ++..|..+..+++|+.|++++|.+++..+..+..
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l------------------------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 221 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQL------------------------EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 221 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCC------------------------CEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTT
T ss_pred cchhHHhhCcCCCEEECCCCCc------------------------CCcCHHHhcCCCCCCEEECCCCccCccChhhccC
Confidence 3444444444555555555544 4444444444445555555555554444444455
Q ss_pred CCcccEEEecCccccccCccccccCC-CccEEEccCccccCCC
Q 005864 255 LESLEKLNVSHNNLSGLIPSCFEGMH-GLSCIDISYNELLGLI 296 (673)
Q Consensus 255 l~~L~~L~l~~N~l~~~~~~~~~~~~-~L~~l~l~~N~l~~~~ 296 (673)
+++|+.|++++|++++..+..+..++ +|+.|++++|++.+..
T Consensus 222 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 222 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp CTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred cccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeeccc
Confidence 55555555555555555555555553 5555555555555543
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=271.40 Aligned_cols=215 Identities=23% Similarity=0.257 Sum_probs=108.3
Q ss_pred cCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCC
Q 005864 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGI 86 (673)
Q Consensus 7 ~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~ 86 (673)
..+.+++++++|++|+|++|.+++. | .|..+++|++|+|++|++++. + +..+++|++|+|++|+++++. +..
T Consensus 33 ~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~~---~~~ 104 (457)
T 3bz5_A 33 TDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNLD---VTP 104 (457)
T ss_dssp TSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCCC---CTT
T ss_pred ccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCceee---cCC
Confidence 3344555555566666666555543 3 455555566666665555532 2 555555555555555555442 555
Q ss_pred CCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEE
Q 005864 87 YPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLV 166 (673)
Q Consensus 87 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~ 166 (673)
+++|++|++++|+++++ .++.+++|++|++++|++++. .++.+++|++|++++|+..+.+ .+..+++|+.|+
T Consensus 105 l~~L~~L~L~~N~l~~l---~~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 176 (457)
T 3bz5_A 105 LTKLTYLNCDTNKLTKL---DVSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLD 176 (457)
T ss_dssp CTTCCEEECCSSCCSCC---CCTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEE
T ss_pred CCcCCEEECCCCcCCee---cCCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEE
Confidence 55555555555555543 145555555555555555542 1444555555555555322222 244445555555
Q ss_pred ccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCC
Q 005864 167 LNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGG 246 (673)
Q Consensus 167 L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~ 246 (673)
+++|++++ ++ +..+++|+.|++++|.+++. .+..+++|+.|++++|++++ +| +..+++|+.|++++|.+++
T Consensus 177 ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 177 CSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp CCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC
T ss_pred CCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCC
Confidence 55555553 22 44444555555555555432 24444455555555555544 22 4444445555555555443
|
| >2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=263.83 Aligned_cols=229 Identities=24% Similarity=0.277 Sum_probs=178.7
Q ss_pred CccEEEccCCccccccccCccccCCCcEEEcccCccCcc--CChhhhccccccccccccccccccCCccccCCCCCCEEE
Q 005864 89 NLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGS--IPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLV 166 (673)
Q Consensus 89 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~--~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~ 166 (673)
+|++|+|++|.++.+....|.++++|++|+|++|.++.. .+..+..+++|++|++++|.+. .++..+..+++|++|+
T Consensus 29 ~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~ 107 (306)
T 2z66_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLD 107 (306)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEE
T ss_pred CCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEE
Confidence 455555555555544444455555555555555555422 2455566777777777777776 4555677788888888
Q ss_pred ccCccccccCC-ccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCcc-CCchhhhcccCCCeEeecCCcC
Q 005864 167 LNGNKLSGNLP-RVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRK-EFPVELEKLVQLSELDLSHNFL 244 (673)
Q Consensus 167 L~~n~l~~~~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~ls~N~l 244 (673)
+++|++++..+ ..+..+++|++|++++|.+.+..+..+..+++|+.|++++|.+++ ..|..+..+++|+.|++++|.+
T Consensus 108 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 187 (306)
T 2z66_A 108 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 187 (306)
T ss_dssp CTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC
T ss_pred CCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCc
Confidence 88888886554 578888899999999999887788888889999999999999986 5788899999999999999999
Q ss_pred CCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCccc--ccCccccccCCcCCCC
Q 005864 245 GGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGF--QYDPIQALRGNRGLCG 318 (673)
Q Consensus 245 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~--~~~~~~~~~~n~~~c~ 318 (673)
++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++|++++..|..... .......+.+|+..|+
T Consensus 188 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 188 EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred CCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 9888889999999999999999999998888999999999999999999988764432 2556778899988775
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.9e-30 Score=272.70 Aligned_cols=253 Identities=24% Similarity=0.260 Sum_probs=201.7
Q ss_pred CCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcc
Q 005864 41 QLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFS 120 (673)
Q Consensus 41 ~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 120 (673)
+...++.+++.++ .+|..+. ++++.|+|++|+|+.+.+..|..+++|++|+|++|.++.+.+..|.++++|++|+|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~ 120 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELF 120 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECC
Confidence 4567777777776 5555443 577778888888877777777788888888888888777777777778888888888
Q ss_pred cCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccC-ccccccCCccccCCCCCCEEEeCCCCCCCc
Q 005864 121 MNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNG-NKLSGNLPRVLGSLSELEYLDLSTNKLSGS 199 (673)
Q Consensus 121 ~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~-n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~ 199 (673)
+|+++...+..|..+++|++|+|++|+++...+..|..+++|++|+|++ |.+....+..|..+++|+.|++++|.++ .
T Consensus 121 ~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~ 199 (440)
T 3zyj_A 121 DNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-E 199 (440)
T ss_dssp SSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-S
T ss_pred CCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-c
Confidence 8888766666777888888888888888766666778888888888887 4455445557888888888888888887 4
Q ss_pred CCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccC
Q 005864 200 IPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGM 279 (673)
Q Consensus 200 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~ 279 (673)
+| .+..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+++..+..|.++++|+.|+|++|++++..+..|..+
T Consensus 200 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 278 (440)
T 3zyj_A 200 IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPL 278 (440)
T ss_dssp CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSC
T ss_pred cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccc
Confidence 55 47788888999999998888888888888899999999999988778888889999999999999998888888889
Q ss_pred CCccEEEccCccccCCCCC
Q 005864 280 HGLSCIDISYNELLGLIPN 298 (673)
Q Consensus 280 ~~L~~l~l~~N~l~~~~~~ 298 (673)
++|+.|+|++|++.+...-
T Consensus 279 ~~L~~L~L~~Np~~CdC~l 297 (440)
T 3zyj_A 279 HHLERIHLHHNPWNCNCDI 297 (440)
T ss_dssp TTCCEEECCSSCEECSSTT
T ss_pred cCCCEEEcCCCCccCCCCc
Confidence 9999999999998876643
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-29 Score=272.79 Aligned_cols=253 Identities=22% Similarity=0.221 Sum_probs=206.6
Q ss_pred CCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcc
Q 005864 41 QLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFS 120 (673)
Q Consensus 41 ~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 120 (673)
+...++.+++.++ .+|..+. ++|+.|+|++|+|+++.+..|..+++|++|+|++|.++++.+..|.++++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 4567777777776 4555443 578888888888887777788888888888888888887777788888888888888
Q ss_pred cCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccC-ccccccCCccccCCCCCCEEEeCCCCCCCc
Q 005864 121 MNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNG-NKLSGNLPRVLGSLSELEYLDLSTNKLSGS 199 (673)
Q Consensus 121 ~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~-n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~ 199 (673)
+|.++...+..|..+++|++|+|++|+++...+..|..+++|+.|++++ |.+....+..|..+++|+.|++++|.+++
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~- 210 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD- 210 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-
Confidence 8888876667788888888888888888866667788888888888888 45554555578888889999999998884
Q ss_pred CCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccC
Q 005864 200 IPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGM 279 (673)
Q Consensus 200 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~ 279 (673)
+| .+..+++|+.|+|++|++++..|..|..+++|+.|++++|.+++..+..|..+++|+.|+|++|++++..+..|..+
T Consensus 211 ~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 289 (452)
T 3zyi_A 211 MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPL 289 (452)
T ss_dssp CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTC
T ss_pred cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccc
Confidence 44 47788899999999999998888889999999999999999988888888999999999999999998888888899
Q ss_pred CCccEEEccCccccCCCCC
Q 005864 280 HGLSCIDISYNELLGLIPN 298 (673)
Q Consensus 280 ~~L~~l~l~~N~l~~~~~~ 298 (673)
++|+.|+|++|++.+...-
T Consensus 290 ~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 290 RYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp TTCCEEECCSSCEECSTTT
T ss_pred cCCCEEEccCCCcCCCCCc
Confidence 9999999999999887653
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.5e-33 Score=297.89 Aligned_cols=234 Identities=20% Similarity=0.206 Sum_probs=152.0
Q ss_pred CCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcc
Q 005864 41 QLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFS 120 (673)
Q Consensus 41 ~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 120 (673)
+|++|+|++|.+++..|..|..+++|++|+|++|.+++..+ |..+++|++|+|++|.+++.. ..++|+.|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEECc
Confidence 66666666666666556666666666666666666665443 666666777777776665433 22566666666
Q ss_pred cCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCcccc-CCCCCCEEEeCCCCCCCc
Q 005864 121 MNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG-SLSELEYLDLSTNKLSGS 199 (673)
Q Consensus 121 ~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~-~l~~L~~L~l~~n~l~~~ 199 (673)
+|.+++..+. .+++|+.|+|++|.+++..|..+..+++|+.|+|++|.+++..|..+. .+++|+.|+|++|.+++.
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 6666654332 245666666666666666566666666777777777777665565554 567777777777777644
Q ss_pred CCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCcccc-ccCcccccc
Q 005864 200 IPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLS-GLIPSCFEG 278 (673)
Q Consensus 200 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~ 278 (673)
. .+..+++|+.|+|++|.+++..+ .+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|.+. +..|..+..
T Consensus 185 ~--~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~ 260 (487)
T 3oja_A 185 K--GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (487)
T ss_dssp E--CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCBCHHHHHHHHTT
T ss_pred c--ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCc-ccchhhccCCCCCEEEcCCCCCcCcchHHHHHh
Confidence 2 23346677777777777776444 3667777777777777777 45666777777777777777776 455566666
Q ss_pred CCCccEEEcc
Q 005864 279 MHGLSCIDIS 288 (673)
Q Consensus 279 ~~~L~~l~l~ 288 (673)
++.|+.++++
T Consensus 261 l~~L~~l~~~ 270 (487)
T 3oja_A 261 NQRVQTVAKQ 270 (487)
T ss_dssp CHHHHHHHHH
T ss_pred CCCCcEEecc
Confidence 6666666654
|
| >3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-29 Score=270.11 Aligned_cols=250 Identities=23% Similarity=0.266 Sum_probs=226.0
Q ss_pred CCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEc
Q 005864 16 TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDI 95 (673)
Q Consensus 16 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 95 (673)
.....++.+++.++ .+|..+. ++++.|+|++|+|+...+..|.++++|++|+|++|+|+.+.+..|..+++|++|+|
T Consensus 43 ~~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 43 NQFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp TTSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred CCCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 35678999999999 6676665 68999999999999888899999999999999999999999999999999999999
Q ss_pred cCCccccccccCccccCCCcEEEcccCccCccCChhhhcccccccccccc-ccccccCCccccCCCCCCEEEccCccccc
Q 005864 96 SHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSL-NQIVGEIPIELGNLKSLNYLVLNGNKLSG 174 (673)
Q Consensus 96 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~-n~i~~~~~~~l~~l~~L~~L~L~~n~l~~ 174 (673)
++|+++.+.+..|..+++|++|+|++|.++...+..|..+++|++|++++ |.+....+..|..+++|++|+|++|.++
T Consensus 120 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~- 198 (440)
T 3zyj_A 120 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR- 198 (440)
T ss_dssp CSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-
T ss_pred CCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-
Confidence 99999988888899999999999999999988888999999999999998 4555555667899999999999999999
Q ss_pred cCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccC
Q 005864 175 NLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICN 254 (673)
Q Consensus 175 ~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 254 (673)
.+| .+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..|..
T Consensus 199 ~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 277 (440)
T 3zyj_A 199 EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTP 277 (440)
T ss_dssp SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSS
T ss_pred ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcc
Confidence 445 4888999999999999999888999999999999999999999999999999999999999999999877788899
Q ss_pred CCcccEEEecCccccc
Q 005864 255 LESLEKLNVSHNNLSG 270 (673)
Q Consensus 255 l~~L~~L~l~~N~l~~ 270 (673)
+++|+.|+|++|++..
T Consensus 278 l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 278 LHHLERIHLHHNPWNC 293 (440)
T ss_dssp CTTCCEEECCSSCEEC
T ss_pred ccCCCEEEcCCCCccC
Confidence 9999999999999863
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-30 Score=258.61 Aligned_cols=224 Identities=22% Similarity=0.176 Sum_probs=150.8
Q ss_pred CEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCC
Q 005864 19 KGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHN 98 (673)
Q Consensus 19 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 98 (673)
++++.+++.++ .+|..+ .++|++|+|++|.++...+..|..+++|++|+|++|.++++.+..|..+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 56777777777 345433 357777777777777666666777777777777777777776777777777777777777
Q ss_pred c-cccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCC
Q 005864 99 N-FYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLP 177 (673)
Q Consensus 99 ~-i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 177 (673)
. ++...+..+..+++|++|++++|.+++..+..+..+++|++|++++|+++...+..+..+++|++|++++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 5 666666667777777777777777776666666666677777777776665555556666666666666666665555
Q ss_pred ccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCC
Q 005864 178 RVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLG 245 (673)
Q Consensus 178 ~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~ 245 (673)
..|..+++|+.|++++|.+++..|..|..+++|+.|++++|++++..+..+..+++|+.|++++|++.
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCcc
Confidence 55666666666666666666555666666666666666666666555555666666666666666655
|
| >3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=271.03 Aligned_cols=285 Identities=24% Similarity=0.258 Sum_probs=238.2
Q ss_pred CCCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccc
Q 005864 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI 80 (673)
Q Consensus 1 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~ 80 (673)
.|+|++. | .++.+++|++|+|++|.+++. + ++.+++|++|++++|++++. + +..+++|++|++++|+++++.
T Consensus 51 ~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~l~ 122 (457)
T 3bz5_A 51 NSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTKLD 122 (457)
T ss_dssp SSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSCCC
T ss_pred CCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCeec
Confidence 3678864 5 799999999999999999965 3 89999999999999999864 3 899999999999999999863
Q ss_pred ccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCC
Q 005864 81 SEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLK 160 (673)
Q Consensus 81 ~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~ 160 (673)
+..+++|++|++++|+++++ .++.+++|+.|++++|...+.+ .+..+++|+.|++++|++++ +| +..++
T Consensus 123 ---~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~ 191 (457)
T 3bz5_A 123 ---VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNK 191 (457)
T ss_dssp ---CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCT
T ss_pred ---CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCC
Confidence 88999999999999999875 3888999999999999655444 47889999999999999986 44 88899
Q ss_pred CCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhccc-------C
Q 005864 161 SLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLV-------Q 233 (673)
Q Consensus 161 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~-------~ 233 (673)
+|+.|++++|++++. .+..+++|+.|++++|.+++ +| +..+++|+.|++++|++++..+..+..+. +
T Consensus 192 ~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~ 265 (457)
T 3bz5_A 192 LLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTD 265 (457)
T ss_dssp TCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCC
T ss_pred CCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCC
Confidence 999999999999965 38899999999999999996 56 88999999999999999987766666554 5
Q ss_pred CCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCcc--------ccccCCCccEEEccCccccCCCCCCcccccC
Q 005864 234 LSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPS--------CFEGMHGLSCIDISYNELLGLIPNSTGFQYD 305 (673)
Q Consensus 234 L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~--------~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~ 305 (673)
|+.|++++|.+.+.+| ++.+++|+.|++++|...+.+|. .+..+++|+.|++++|++++. + .......
T Consensus 266 L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~-l~~l~~L 341 (457)
T 3bz5_A 266 LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D-VSHNTKL 341 (457)
T ss_dssp CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C-CTTCTTC
T ss_pred CCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-c-cccCCcC
Confidence 6777777777766666 57789999999999987665543 356778999999999999995 3 3344444
Q ss_pred ccccccCCc
Q 005864 306 PIQALRGNR 314 (673)
Q Consensus 306 ~~~~~~~n~ 314 (673)
....+.+|.
T Consensus 342 ~~L~l~~N~ 350 (457)
T 3bz5_A 342 KSLSCVNAH 350 (457)
T ss_dssp SEEECCSSC
T ss_pred cEEECCCCC
Confidence 455555554
|
| >3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2e-29 Score=270.62 Aligned_cols=250 Identities=22% Similarity=0.208 Sum_probs=225.3
Q ss_pred CCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEc
Q 005864 16 TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDI 95 (673)
Q Consensus 16 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 95 (673)
.+...++.+++.++ .+|..+. ++|++|+|++|+|++..+..|.++++|+.|+|++|+|+++.+..|..+++|++|+|
T Consensus 54 ~~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 54 NQFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp SSSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEEC
Confidence 34678999999998 5676654 68999999999999888899999999999999999999999999999999999999
Q ss_pred cCCccccccccCccccCCCcEEEcccCccCccCChhhhcccccccccccc-ccccccCCccccCCCCCCEEEccCccccc
Q 005864 96 SHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSL-NQIVGEIPIELGNLKSLNYLVLNGNKLSG 174 (673)
Q Consensus 96 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~-n~i~~~~~~~l~~l~~L~~L~L~~n~l~~ 174 (673)
++|.++.+.+..|..+++|++|+|++|.++...+..|..+++|+.|++++ |.+....+..+..+++|++|+|++|++++
T Consensus 131 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 131 FDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp CSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred CCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 99999988888899999999999999999988788899999999999998 55655555678899999999999999995
Q ss_pred cCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccC
Q 005864 175 NLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICN 254 (673)
Q Consensus 175 ~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 254 (673)
. | .+..+++|+.|+|++|.+++..|..|..+++|+.|++++|++++..+..|..+++|+.|+|++|++++..+..|..
T Consensus 211 ~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 288 (452)
T 3zyi_A 211 M-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTP 288 (452)
T ss_dssp C-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTT
T ss_pred c-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcc
Confidence 4 4 5888999999999999999888999999999999999999999999999999999999999999999777788899
Q ss_pred CCcccEEEecCccccc
Q 005864 255 LESLEKLNVSHNNLSG 270 (673)
Q Consensus 255 l~~L~~L~l~~N~l~~ 270 (673)
+++|+.|+|++|++..
T Consensus 289 l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 289 LRYLVELHLHHNPWNC 304 (452)
T ss_dssp CTTCCEEECCSSCEEC
T ss_pred ccCCCEEEccCCCcCC
Confidence 9999999999998864
|
| >1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=255.03 Aligned_cols=229 Identities=22% Similarity=0.232 Sum_probs=126.4
Q ss_pred CEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccC
Q 005864 43 TNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMN 122 (673)
Q Consensus 43 ~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 122 (673)
+.++++++.++ .+|..+ .++|++|+|++|.++++.+..|..+++|++|+|++|.++++.+..|.++++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 55666666665 334322 345666666666666655555666666666666666665555555555555555555555
Q ss_pred c-cCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCC
Q 005864 123 N-ITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIP 201 (673)
Q Consensus 123 ~-l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~ 201 (673)
. ++...+..+..+++|++|++ ++|.+++..+..+..+++|++|++++|.+++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l------------------------~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 146 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHL------------------------DRCGLQELGPGLFRGLAALQYLYLQDNALQALPD 146 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEEC------------------------TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCccccCHHHhcCCcCCCEEEC------------------------CCCcCCEECHhHhhCCcCCCEEECCCCcccccCH
Confidence 4 44443444444444554544 4444444444444455555555555555544434
Q ss_pred ccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCC
Q 005864 202 ETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHG 281 (673)
Q Consensus 202 ~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~ 281 (673)
..|..+++|+.|++++|++++..+..|..+++|+.|++++|.+++..|..|..+++|+.|++++|++++..+..+..+++
T Consensus 147 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 226 (285)
T 1ozn_A 147 DTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRA 226 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTT
T ss_pred hHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcc
Confidence 44555555555555555555444444555555555555555555555555555566666666666665555555566666
Q ss_pred ccEEEccCccccCCCCC
Q 005864 282 LSCIDISYNELLGLIPN 298 (673)
Q Consensus 282 L~~l~l~~N~l~~~~~~ 298 (673)
|+.|++++|++.+..+.
T Consensus 227 L~~L~l~~N~~~c~~~~ 243 (285)
T 1ozn_A 227 LQYLRLNDNPWVCDCRA 243 (285)
T ss_dssp CCEEECCSSCEECSGGG
T ss_pred cCEEeccCCCccCCCCc
Confidence 66666666666655443
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=252.07 Aligned_cols=236 Identities=23% Similarity=0.287 Sum_probs=162.6
Q ss_pred CCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEE
Q 005864 15 FTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLD 94 (673)
Q Consensus 15 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 94 (673)
.++++.|+|++|.++ .+|..+.++++|++|+|++|.++ .+|..+..+++|++|+|++|+++. .+..|..+++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~-lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRA-LPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCC-CCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCcccc-CcHHHhcCcCCCEEE
Confidence 367777888888777 56666777777888888877777 667777777777777777777773 355677777777777
Q ss_pred ccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccc
Q 005864 95 ISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSG 174 (673)
Q Consensus 95 L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~ 174 (673)
|++|++.+..+..+... ..+..+.++++|++|++++|+++ .+|..+..+++|++|+|++|.+++
T Consensus 157 L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 220 (328)
T 4fcg_A 157 IRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA 220 (328)
T ss_dssp EEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC
T ss_pred CCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc
Confidence 77766655555544320 01122344666666666666666 556666666777777777777763
Q ss_pred cCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccC
Q 005864 175 NLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICN 254 (673)
Q Consensus 175 ~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 254 (673)
+|..+..+++|++|++++|.+.+.+|..+..+++|+.|++++|++.+.+|..+..+++|+.|+|++|.+.+.+|..++.
T Consensus 221 -l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~ 299 (328)
T 4fcg_A 221 -LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQ 299 (328)
T ss_dssp -CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGG
T ss_pred -CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhh
Confidence 4445667777777777777776677777777777777777777777777777777777777777777777777777777
Q ss_pred CCcccEEEecCccccc
Q 005864 255 LESLEKLNVSHNNLSG 270 (673)
Q Consensus 255 l~~L~~L~l~~N~l~~ 270 (673)
+++|+.+++..|.+..
T Consensus 300 L~~L~~l~l~~~~~~~ 315 (328)
T 4fcg_A 300 LPANCIILVPPHLQAQ 315 (328)
T ss_dssp SCTTCEEECCGGGSCC
T ss_pred ccCceEEeCCHHHHHH
Confidence 7777777777665543
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.3e-31 Score=286.85 Aligned_cols=187 Identities=20% Similarity=0.142 Sum_probs=133.5
Q ss_pred eccCCcEEEEEEE-eCCCCEEEEEeeccchh-------hhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeeeEEE
Q 005864 410 IGIGGQASVYRGE-LPSGEVVAVKKFHSLLL-------SEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 410 ig~G~~g~vy~~~-~~~~~~vavK~~~~~~~-------~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.+.|++|.+..++ .-.|+.||||.+..... ......++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 5667777766653 33589999999865321 1233457799999999999 7999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||++|++|.+++...+ +++.. +|+.||+.||+|+|++ |||||||||+|||+++++.+||+|||+|+.....
T Consensus 322 Eyv~G~~L~d~i~~~~---~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE---EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp ECCCSEEHHHHHHTTC---CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred ecCCCCcHHHHHHhCC---CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 9999999999998764 34443 5899999999999999 9999999999999999999999999999977655
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCC
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p 606 (673)
........||++|+|||++.+ .+..++|+||+|++++++.++..|
T Consensus 393 ~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 555566789999999999865 467789999999998887665544
|
| >4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=251.94 Aligned_cols=236 Identities=19% Similarity=0.227 Sum_probs=175.9
Q ss_pred CCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEc
Q 005864 40 MQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNF 119 (673)
Q Consensus 40 ~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 119 (673)
++++.|+|++|+++ .+|..+..+++|++|+|++|.++ ..+..|..+++|++|+|++|.++ ..+..+.++++|++|+|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 45556666666555 44545555555555555555555 33344455555555555555554 23344444455555555
Q ss_pred ccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCc
Q 005864 120 SMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGS 199 (673)
Q Consensus 120 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~ 199 (673)
++|++.+.+|..+... ..+..+..+++|++|+|++|+++ .+|..+..+++|++|++++|.++ .
T Consensus 158 ~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~ 220 (328)
T 4fcg_A 158 RACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS-A 220 (328)
T ss_dssp EEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC-C
T ss_pred CCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC-c
Confidence 5444444444332220 11122445899999999999999 78888999999999999999999 5
Q ss_pred CCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccC
Q 005864 200 IPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGM 279 (673)
Q Consensus 200 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~ 279 (673)
+|..+..+++|+.|++++|++.+..|..+..+++|+.|++++|.+.+.+|..+..+++|+.|+|++|++.+.+|..+..+
T Consensus 221 l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L 300 (328)
T 4fcg_A 221 LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQL 300 (328)
T ss_dssp CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGS
T ss_pred CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhc
Confidence 77789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEccCccccCC
Q 005864 280 HGLSCIDISYNELLGL 295 (673)
Q Consensus 280 ~~L~~l~l~~N~l~~~ 295 (673)
++|+.+++..|.+...
T Consensus 301 ~~L~~l~l~~~~~~~l 316 (328)
T 4fcg_A 301 PANCIILVPPHLQAQL 316 (328)
T ss_dssp CTTCEEECCGGGSCC-
T ss_pred cCceEEeCCHHHHHHH
Confidence 9999999998877654
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-30 Score=265.37 Aligned_cols=267 Identities=19% Similarity=0.181 Sum_probs=215.0
Q ss_pred CCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEcc
Q 005864 17 NLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDIS 96 (673)
Q Consensus 17 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 96 (673)
.++.++++.+.+.......+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..+ |..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 35556666777765555556677789999999998887777888889999999999998886654 8888899999999
Q ss_pred CCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccC
Q 005864 97 HNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNL 176 (673)
Q Consensus 97 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 176 (673)
+|.+++.. ..++|++|++++|.+++..+.. +++|++|++++|++++..+..+..+++|++|++++|.+++..
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 160 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVN 160 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEE
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCccc
Confidence 99887543 3478899999999888654433 577899999999998777778888899999999999998776
Q ss_pred Cccc-cCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCC
Q 005864 177 PRVL-GSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNL 255 (673)
Q Consensus 177 ~~~l-~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 255 (673)
+..+ ..+++|++|++++|.+++. + ....+++|+.|++++|++++..+ .+..+++|+.|++++|.++ .+|..+..+
T Consensus 161 ~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~-~l~~~~~~l 236 (317)
T 3o53_A 161 FAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLV-LIEKALRFS 236 (317)
T ss_dssp GGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCC-EECTTCCCC
T ss_pred HHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCccc-chhhHhhcC
Confidence 6666 4788999999999999854 3 23358899999999999986544 5888999999999999998 678888899
Q ss_pred CcccEEEecCcccc-ccCccccccCCCccEEEccC-ccccCCCC
Q 005864 256 ESLEKLNVSHNNLS-GLIPSCFEGMHGLSCIDISY-NELLGLIP 297 (673)
Q Consensus 256 ~~L~~L~l~~N~l~-~~~~~~~~~~~~L~~l~l~~-N~l~~~~~ 297 (673)
++|+.|++++|++. +..+..+..++.|+.+++++ +.+.+..|
T Consensus 237 ~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 237 QNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp TTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred CCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 99999999999998 67788888999999999984 45555544
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.5e-30 Score=261.22 Aligned_cols=251 Identities=18% Similarity=0.164 Sum_probs=206.6
Q ss_pred cccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccc-cccccC-------CCCCccEEEccCCcccccccc
Q 005864 35 EIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGN-ISEVFG-------IYPNLTFLDISHNNFYGEIWS 106 (673)
Q Consensus 35 ~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~-~~~~~~-------~l~~L~~L~L~~n~i~~~~~~ 106 (673)
.++..++|+.|++++|.+ .+|..+... |+.|+|++|+++.. .+..+. .+++|++|+|++|.+++..+.
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 356677889999999988 567666654 88899999988532 333333 688999999999999877777
Q ss_pred Cc--cccCCCcEEEcccCccCccCChhhhcc-----ccccccccccccccccCCccccCCCCCCEEEccCcccccc--CC
Q 005864 107 SW--GKCQQLGTLNFSMNNITGSIPPEIGKL-----YQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN--LP 177 (673)
Q Consensus 107 ~~--~~l~~L~~L~L~~n~l~~~~~~~l~~l-----~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~--~~ 177 (673)
.+ ..+++|++|+|++|++++. |..+..+ ++|++|++++|++++..+..+..+++|++|++++|++.+. .+
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 65 8899999999999999976 8888887 8999999999999988788999999999999999998754 23
Q ss_pred ccc--cCCCCCCEEEeCCCCCCCc--C-CccccccccccEEEccCCcCccCCc-hhhhcccCCCeEeecCCcCCCCCccc
Q 005864 178 RVL--GSLSELEYLDLSTNKLSGS--I-PETLGNLLKVHYLNLSNNQFRKEFP-VELEKLVQLSELDLSHNFLGGEIPPQ 251 (673)
Q Consensus 178 ~~l--~~l~~L~~L~l~~n~l~~~--~-~~~l~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~ls~N~l~~~~~~~ 251 (673)
..+ ..+++|++|++++|.+++. + ...+..+++|+.|++++|++++..| ..+..+++|+.|++++|.++ .+|..
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~ 271 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG 271 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSS
T ss_pred HHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhh
Confidence 333 7889999999999999832 1 2344577899999999999998764 45667889999999999998 77777
Q ss_pred ccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCC
Q 005864 252 ICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGL 295 (673)
Q Consensus 252 ~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~ 295 (673)
+. ++|++|+|++|+|++. |. +..+++|++|++++|++++.
T Consensus 272 ~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 272 LP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp CC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred cc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 76 8999999999999988 55 88999999999999999863
|
| >3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.1e-30 Score=259.62 Aligned_cols=257 Identities=23% Similarity=0.233 Sum_probs=222.2
Q ss_pred ccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccc
Q 005864 4 LSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEV 83 (673)
Q Consensus 4 i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~ 83 (673)
+...++..+..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+ +..+++|++|+|++|+++++..
T Consensus 22 l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~~-- 97 (317)
T 3o53_A 22 LKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-- 97 (317)
T ss_dssp HHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEEE--
T ss_pred hhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccccC--
Confidence 343444555667899999999999998888999999999999999999986554 9999999999999999986553
Q ss_pred cCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCcccc-CCCCC
Q 005864 84 FGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELG-NLKSL 162 (673)
Q Consensus 84 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~-~l~~L 162 (673)
.++|++|++++|.+++..+.. +++|++|++++|++++..+..+..+++|++|++++|.+++..+..+. .+++|
T Consensus 98 ---~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L 171 (317)
T 3o53_A 98 ---GPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTL 171 (317)
T ss_dssp ---CTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTC
T ss_pred ---CCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcC
Confidence 389999999999999776554 57899999999999988788899999999999999999987777664 78999
Q ss_pred CEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCC
Q 005864 163 NYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHN 242 (673)
Q Consensus 163 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N 242 (673)
++|+|++|.+++.. ....+++|+.|++++|.+++ +|..+..+++|+.|++++|++++ +|..+..+++|+.|++++|
T Consensus 172 ~~L~L~~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N 247 (317)
T 3o53_A 172 EHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGN 247 (317)
T ss_dssp CEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTC
T ss_pred CEEECCCCcCcccc--cccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCC
Confidence 99999999999653 34458999999999999994 55669999999999999999995 5777899999999999999
Q ss_pred cCC-CCCcccccCCCcccEEEecCc-cccccCcc
Q 005864 243 FLG-GEIPPQICNLESLEKLNVSHN-NLSGLIPS 274 (673)
Q Consensus 243 ~l~-~~~~~~~~~l~~L~~L~l~~N-~l~~~~~~ 274 (673)
++. +..+..+..+++|+.|++++| .+++..+.
T Consensus 248 ~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 248 GFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp CCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred CccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 998 778888999999999999955 56665554
|
| >1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.1e-30 Score=260.85 Aligned_cols=250 Identities=21% Similarity=0.254 Sum_probs=212.5
Q ss_pred ccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccc-cccCcccc-------CCCCCcEEEccCcccccccccc
Q 005864 12 VGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLF-GQIPRSLR-------NLASLNRVHLEQNHLTGNISEV 83 (673)
Q Consensus 12 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~-~~~~~~l~-------~l~~L~~L~L~~n~i~~~~~~~ 83 (673)
+...++|+.|++++|.+ .+|..+... |+.|+|++|.+. ...|..+. ++++|++|+|++|++++..+..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 45677899999999999 577777654 999999999995 45565555 7999999999999999776665
Q ss_pred c--CCCCCccEEEccCCccccccccCcccc-----CCCcEEEcccCccCccCChhhhcccccccccccccccccc--CCc
Q 005864 84 F--GIYPNLTFLDISHNNFYGEIWSSWGKC-----QQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGE--IPI 154 (673)
Q Consensus 84 ~--~~l~~L~~L~L~~n~i~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~--~~~ 154 (673)
+ ..+++|++|+|++|.+++. +..+..+ ++|++|+|++|++++..+..|+.+++|++|++++|++.+. .+.
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 193 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLIS 193 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHH
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHH
Confidence 5 8999999999999999987 7777777 9999999999999988889999999999999999997654 233
Q ss_pred cc--cCCCCCCEEEccCccccc---cCCccccCCCCCCEEEeCCCCCCCcCC-ccccccccccEEEccCCcCccCCchhh
Q 005864 155 EL--GNLKSLNYLVLNGNKLSG---NLPRVLGSLSELEYLDLSTNKLSGSIP-ETLGNLLKVHYLNLSNNQFRKEFPVEL 228 (673)
Q Consensus 155 ~l--~~l~~L~~L~L~~n~l~~---~~~~~l~~l~~L~~L~l~~n~l~~~~~-~~l~~l~~L~~L~l~~n~l~~~~~~~~ 228 (673)
.+ ..+++|++|+|++|++++ .....+..+++|+.|++++|.+++..| ..+..+++|+.|+|++|+++ .+|..+
T Consensus 194 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 194 ALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp HSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred HHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 44 789999999999999983 222445688999999999999997664 45677899999999999999 566666
Q ss_pred hcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCcccccc
Q 005864 229 EKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGL 271 (673)
Q Consensus 229 ~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 271 (673)
. ++|+.|++++|++++. |. +..+++|++|++++|++++.
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 5 7999999999999965 65 89999999999999999864
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.95 E-value=9.4e-27 Score=248.51 Aligned_cols=259 Identities=29% Similarity=0.384 Sum_probs=157.3
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS 81 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 81 (673)
|++++ +|+.+ ++|++|++++|.+++. +.. .++|++|++++|++++ +| .|.++++|++|++++|++++++.
T Consensus 101 n~l~~-lp~~~---~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~lp~ 170 (454)
T 1jl5_A 101 NSLTE-LPELP---QSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKLPD 170 (454)
T ss_dssp SCCSS-CCCCC---TTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCCCC
T ss_pred CcCCc-ccccc---CCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcccCC
Confidence 45554 44432 5566666666666532 211 1567777777777774 55 47777777777777777775432
Q ss_pred cccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCC
Q 005864 82 EVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKS 161 (673)
Q Consensus 82 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~ 161 (673)
..++|++|++++|.+++. + .++++++|+.|++++|.+++ +|... ++|++|++++|.++ .+| .+..+++
T Consensus 171 ----~~~~L~~L~L~~n~l~~l-~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~ 238 (454)
T 1jl5_A 171 ----LPPSLEFIAAGNNQLEEL-P-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-ELQNLPF 238 (454)
T ss_dssp ----CCTTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CCTTCTT
T ss_pred ----CcccccEEECcCCcCCcC-c-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-ccCCCCC
Confidence 224677777777777653 2 46677777777777777764 23221 36666677777666 445 3666666
Q ss_pred CCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCcc--CCchh------------
Q 005864 162 LNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRK--EFPVE------------ 227 (673)
Q Consensus 162 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~--~~~~~------------ 227 (673)
|++|++++|++++ +|.. .++|+.|++++|.+++ +|.. .++|+.|++++|++++ ..|..
T Consensus 239 L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~ 310 (454)
T 1jl5_A 239 LTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIR 310 (454)
T ss_dssp CCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCS
T ss_pred CCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCC
Confidence 6666666666663 3322 2456666666665553 3322 1344444554444443 11111
Q ss_pred -hhcc-cCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccC--CCCC
Q 005864 228 -LEKL-VQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLG--LIPN 298 (673)
Q Consensus 228 -~~~l-~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~--~~~~ 298 (673)
+..+ ++|+.|++++|++++ +|.. +++|+.|++++|+++++ |. .+++|++|++++|++++ .+|.
T Consensus 311 ~i~~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~l-p~---~l~~L~~L~L~~N~l~~l~~ip~ 377 (454)
T 1jl5_A 311 SLCDLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAEV-PE---LPQNLKQLHVEYNPLREFPDIPE 377 (454)
T ss_dssp EECCCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSSCCCCCT
T ss_pred cccCCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccccc-cc---hhhhccEEECCCCCCCcCCCChH
Confidence 1122 478888888888874 5543 57888888888888854 44 46788888888888888 4554
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=254.75 Aligned_cols=253 Identities=26% Similarity=0.260 Sum_probs=208.5
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS 81 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 81 (673)
|+|+ .+|..+. ++|++|+|++|.|+. +|. .+++|++|+|++|+|+ .+|. .+++|++|+|++|++++++.
T Consensus 50 n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l~~ 118 (622)
T 3g06_A 50 SGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTHLPA 118 (622)
T ss_dssp SCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCCCCC
T ss_pred CCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCCCCC
Confidence 5677 7788776 899999999999994 454 5789999999999998 4554 77899999999999997655
Q ss_pred cccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCC
Q 005864 82 EVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKS 161 (673)
Q Consensus 82 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~ 161 (673)
.+++|+.|++++|+++.++. .+++|++|+|++|.+++. |. .+++|+.|++++|.++. +| ..+++
T Consensus 119 ----~l~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~-l~---~~~~~ 182 (622)
T 3g06_A 119 ----LPSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTS-LP---MLPSG 182 (622)
T ss_dssp ----CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-CC---CCCTT
T ss_pred ----CCCCcCEEECCCCCCCcCCC----CCCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCC-Cc---ccCCC
Confidence 67889999999999986543 248999999999999853 43 34689999999999984 55 45689
Q ss_pred CCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecC
Q 005864 162 LNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241 (673)
Q Consensus 162 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~ 241 (673)
|+.|++++|.+++ +|. .+++|+.|++++|.++ .+|.. +++|+.|++++|++++ +| ..+++|+.|++++
T Consensus 183 L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~ 250 (622)
T 3g06_A 183 LQELSVSDNQLAS-LPT---LPSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSG 250 (622)
T ss_dssp CCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCS
T ss_pred CcEEECCCCCCCC-CCC---ccchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCC
Confidence 9999999999995 443 2478999999999998 45543 4789999999999997 44 4567999999999
Q ss_pred CcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCC
Q 005864 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPN 298 (673)
Q Consensus 242 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~ 298 (673)
|.|+ .+|. .+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|.
T Consensus 251 N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 251 NRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp SCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred CCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 9998 5665 6789999999999999 4578899999999999999999987664
|
| >3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-28 Score=264.48 Aligned_cols=239 Identities=23% Similarity=0.238 Sum_probs=212.4
Q ss_pred cCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccE
Q 005864 13 GNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTF 92 (673)
Q Consensus 13 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 92 (673)
..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| |..+++|++|+|++|.|+++++ .++|++
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~ 103 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIET 103 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCE
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCE
Confidence 344589999999999999888999999999999999999986655 9999999999999999997654 389999
Q ss_pred EEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCcccc-CCCCCCEEEccCcc
Q 005864 93 LDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELG-NLKSLNYLVLNGNK 171 (673)
Q Consensus 93 L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~-~l~~L~~L~L~~n~ 171 (673)
|++++|.+++..+.. +++|+.|+|++|.+++..|..++.+++|+.|+|++|.+++..|..+. .+++|+.|+|++|.
T Consensus 104 L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~ 180 (487)
T 3oja_A 104 LHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (487)
T ss_dssp EECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCc
Confidence 999999999876654 57899999999999988888999999999999999999988888876 79999999999999
Q ss_pred ccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCC-CCCcc
Q 005864 172 LSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLG-GEIPP 250 (673)
Q Consensus 172 l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~-~~~~~ 250 (673)
+++..+ +..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+. +.+|.
T Consensus 181 l~~~~~--~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~ 256 (487)
T 3oja_A 181 IYDVKG--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (487)
T ss_dssp CCEEEC--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHH
T ss_pred cccccc--cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHH
Confidence 997633 4468999999999999995 45569999999999999999996 6777889999999999999998 67778
Q ss_pred cccCCCcccEEEecC
Q 005864 251 QICNLESLEKLNVSH 265 (673)
Q Consensus 251 ~~~~l~~L~~L~l~~ 265 (673)
.+..++.|+.|+++.
T Consensus 257 ~~~~l~~L~~l~~~~ 271 (487)
T 3oja_A 257 FFSKNQRVQTVAKQT 271 (487)
T ss_dssp HHTTCHHHHHHHHHH
T ss_pred HHHhCCCCcEEeccc
Confidence 888899998888864
|
| >1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-27 Score=252.47 Aligned_cols=238 Identities=26% Similarity=0.312 Sum_probs=121.7
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCC-------------CEEEcccCccccccCccccCCCCCcE
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQL-------------TNLEIDNNQLFGQIPRSLRNLASLNR 68 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L-------------~~L~L~~n~i~~~~~~~l~~l~~L~~ 68 (673)
|+| +.+|++++++++|++|++++|.+++..|..++++++| ++|++++|++++ +|. -.++|++
T Consensus 21 n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~---~~~~L~~ 95 (454)
T 1jl5_A 21 SNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE---LPPHLES 95 (454)
T ss_dssp --------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS---CCTTCSE
T ss_pred Cch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC---CcCCCCE
Confidence 567 6888888888888888888888888888888777654 777777777764 332 1256777
Q ss_pred EEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccc
Q 005864 69 VHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQI 148 (673)
Q Consensus 69 L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i 148 (673)
|++++|.+++++. .+++|++|++++|.++++... .++|++|++++|.+++ +| .++++++|++|++++|++
T Consensus 96 L~l~~n~l~~lp~----~~~~L~~L~l~~n~l~~l~~~----~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l 165 (454)
T 1jl5_A 96 LVASCNSLTELPE----LPQSLKSLLVDNNNLKALSDL----PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSL 165 (454)
T ss_dssp EECCSSCCSSCCC----CCTTCCEEECCSSCCSCCCSC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCC
T ss_pred EEccCCcCCcccc----ccCCCcEEECCCCccCcccCC----CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcC
Confidence 7777777665432 225566666666655532210 1455666666666554 33 355555666666666655
Q ss_pred cccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhh
Q 005864 149 VGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVEL 228 (673)
Q Consensus 149 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~ 228 (673)
++ +|.. .++|++|++++|++++ +| .+..+++|+.|++++|.+++ +|... ++|+.|++++|.++ .+| .+
T Consensus 166 ~~-lp~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp-~~ 233 (454)
T 1jl5_A 166 KK-LPDL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-ELP-EL 233 (454)
T ss_dssp SC-CCCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC-CC
T ss_pred cc-cCCC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-ccc-cc
Confidence 52 3322 1355555555555553 33 35555555555555555553 22221 24555555555554 233 24
Q ss_pred hcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccc
Q 005864 229 EKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSG 270 (673)
Q Consensus 229 ~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 270 (673)
..+++|+.|++++|++++ +|.. +++|+.|++++|++++
T Consensus 234 ~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~ 271 (454)
T 1jl5_A 234 QNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD 271 (454)
T ss_dssp TTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC
T ss_pred CCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc
Confidence 455555555555555542 2221 2344444444444443
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-29 Score=274.09 Aligned_cols=293 Identities=20% Similarity=0.152 Sum_probs=209.8
Q ss_pred CCccc----cCCCcccCCCCCCEEEeeCCccccCCCccc-cCCC----CCCEEEcccCcccc----ccCccccCCCCCcE
Q 005864 2 NHLSG----AIPPSVGNFTNLKGLYLYSNSLSGSVPGEI-GNLM----QLTNLEIDNNQLFG----QIPRSLRNLASLNR 68 (673)
Q Consensus 2 n~i~~----~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~-~~l~----~L~~L~L~~n~i~~----~~~~~l~~l~~L~~ 68 (673)
|+|++ .++..+..+++|++|+|++|.+++..+..+ ..++ +|++|+|++|+++. .++..+..+++|++
T Consensus 38 ~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~ 117 (461)
T 1z7x_W 38 CGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQE 117 (461)
T ss_dssp SCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCE
T ss_pred CCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeE
Confidence 45553 456778888999999999999886544443 3355 69999999999884 44788889999999
Q ss_pred EEccCcccccccccc-----cCCCCCccEEEccCCcccccc----ccCccccCCCcEEEcccCccCccCChhhhc-----
Q 005864 69 VHLEQNHLTGNISEV-----FGIYPNLTFLDISHNNFYGEI----WSSWGKCQQLGTLNFSMNNITGSIPPEIGK----- 134 (673)
Q Consensus 69 L~L~~n~i~~~~~~~-----~~~l~~L~~L~L~~n~i~~~~----~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~----- 134 (673)
|+|++|.++...... +...++|++|+|++|.+++.. +..+..+++|++|++++|.++...+..+..
T Consensus 118 L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~ 197 (461)
T 1z7x_W 118 LHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDS 197 (461)
T ss_dssp EECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHS
T ss_pred EECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcC
Confidence 999999987544332 233567999999999887644 445566788888888888887544444432
Q ss_pred ccccccccccccccccc----CCccccCCCCCCEEEccCccccccC-----CccccCCCCCCEEEeCCCCCCCc----CC
Q 005864 135 LYQLHKLDFSLNQIVGE----IPIELGNLKSLNYLVLNGNKLSGNL-----PRVLGSLSELEYLDLSTNKLSGS----IP 201 (673)
Q Consensus 135 l~~L~~L~l~~n~i~~~----~~~~l~~l~~L~~L~L~~n~l~~~~-----~~~l~~l~~L~~L~l~~n~l~~~----~~ 201 (673)
.++|++|++++|.++.. ++..+..+++|++|++++|.+++.. +..+..+++|+.|++++|.+++. ++
T Consensus 198 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~ 277 (461)
T 1z7x_W 198 PCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLC 277 (461)
T ss_dssp CCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHH
T ss_pred CCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHH
Confidence 45888888888888753 4556667788888888888877532 22233577888888888888753 45
Q ss_pred ccccccccccEEEccCCcCccCCchhhhcc-----cCCCeEeecCCcCCCC----CcccccCCCcccEEEecCccccccC
Q 005864 202 ETLGNLLKVHYLNLSNNQFRKEFPVELEKL-----VQLSELDLSHNFLGGE----IPPQICNLESLEKLNVSHNNLSGLI 272 (673)
Q Consensus 202 ~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l-----~~L~~L~ls~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~ 272 (673)
..+..+++|++|++++|.+++..+..+... ++|+.|++++|.+++. ++..+..+++|++|++++|.+++..
T Consensus 278 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~ 357 (461)
T 1z7x_W 278 RVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAG 357 (461)
T ss_dssp HHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHH
T ss_pred HHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccccc
Confidence 666677888888888888876555555443 5788888888887754 3455666778888888888877655
Q ss_pred cccccc-----CCCccEEEccCccccC
Q 005864 273 PSCFEG-----MHGLSCIDISYNELLG 294 (673)
Q Consensus 273 ~~~~~~-----~~~L~~l~l~~N~l~~ 294 (673)
+..+.. .++|++|++++|.++.
T Consensus 358 ~~~l~~~l~~~~~~L~~L~L~~n~i~~ 384 (461)
T 1z7x_W 358 VRELCQGLGQPGSVLRVLWLADCDVSD 384 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred HHHHHHHHcCCCCceEEEECCCCCCCh
Confidence 544442 5678888888887764
|
| >1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I | Back alignment and structure |
|---|
Probab=99.95 E-value=6.7e-30 Score=275.58 Aligned_cols=294 Identities=21% Similarity=0.176 Sum_probs=233.7
Q ss_pred CCccccCCCc-ccCCCCCCEEEeeCCccccC----CCccccCCCCCCEEEcccCccccccCcccc-CCC----CCcEEEc
Q 005864 2 NHLSGAIPPS-VGNFTNLKGLYLYSNSLSGS----VPGEIGNLMQLTNLEIDNNQLFGQIPRSLR-NLA----SLNRVHL 71 (673)
Q Consensus 2 n~i~~~~p~~-~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~-~l~----~L~~L~L 71 (673)
|+|+...... +..+++|++|+|++|.+++. ++..+..+++|++|+|++|.+.+..+..+. .++ +|++|+|
T Consensus 13 ~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L 92 (461)
T 1z7x_W 13 EELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSL 92 (461)
T ss_dssp CCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEEC
T ss_pred cccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEc
Confidence 4555444333 78889999999999999843 466788899999999999999865554433 355 7999999
Q ss_pred cCccccc----ccccccCCCCCccEEEccCCccccccccCccc-----cCCCcEEEcccCccCccC----Chhhhccccc
Q 005864 72 EQNHLTG----NISEVFGIYPNLTFLDISHNNFYGEIWSSWGK-----CQQLGTLNFSMNNITGSI----PPEIGKLYQL 138 (673)
Q Consensus 72 ~~n~i~~----~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-----l~~L~~L~L~~n~l~~~~----~~~l~~l~~L 138 (673)
++|+++. ..+..|..+++|++|+|++|.+++.....+.. .++|++|++++|+++... +..+..+++|
T Consensus 93 ~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L 172 (461)
T 1z7x_W 93 QNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDF 172 (461)
T ss_dssp TTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTC
T ss_pred cCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCC
Confidence 9999995 34778899999999999999998655554433 468999999999999643 5566778999
Q ss_pred cccccccccccccCCcccc-----CCCCCCEEEccCcccccc----CCccccCCCCCCEEEeCCCCCCCcC-----Cccc
Q 005864 139 HKLDFSLNQIVGEIPIELG-----NLKSLNYLVLNGNKLSGN----LPRVLGSLSELEYLDLSTNKLSGSI-----PETL 204 (673)
Q Consensus 139 ~~L~l~~n~i~~~~~~~l~-----~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~l~~n~l~~~~-----~~~l 204 (673)
++|++++|.+++..+..+. ..++|++|++++|.+++. ++..+..+++|++|++++|.+++.. +..+
T Consensus 173 ~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~ 252 (461)
T 1z7x_W 173 KELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLL 252 (461)
T ss_dssp CEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHT
T ss_pred CEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHh
Confidence 9999999998765444443 356999999999999863 4667788999999999999987543 2223
Q ss_pred cccccccEEEccCCcCccC----CchhhhcccCCCeEeecCCcCCCCCcccccC-----CCcccEEEecCcccccc----
Q 005864 205 GNLLKVHYLNLSNNQFRKE----FPVELEKLVQLSELDLSHNFLGGEIPPQICN-----LESLEKLNVSHNNLSGL---- 271 (673)
Q Consensus 205 ~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~-----l~~L~~L~l~~N~l~~~---- 271 (673)
..+++|+.|++++|.++.. ++..+..+++|+.|++++|.+.+..+..+.. .++|++|++++|.+++.
T Consensus 253 ~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 332 (461)
T 1z7x_W 253 HPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSH 332 (461)
T ss_dssp STTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred cCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHH
Confidence 3578999999999999864 4667778999999999999997655544443 26999999999999876
Q ss_pred CccccccCCCccEEEccCccccCC
Q 005864 272 IPSCFEGMHGLSCIDISYNELLGL 295 (673)
Q Consensus 272 ~~~~~~~~~~L~~l~l~~N~l~~~ 295 (673)
.+..+..+++|++|++++|++...
T Consensus 333 l~~~l~~~~~L~~L~Ls~n~i~~~ 356 (461)
T 1z7x_W 333 FSSVLAQNRFLLELQISNNRLEDA 356 (461)
T ss_dssp HHHHHHHCSSCCEEECCSSBCHHH
T ss_pred HHHHHhhCCCccEEEccCCccccc
Confidence 456677889999999999998764
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-26 Score=229.25 Aligned_cols=210 Identities=24% Similarity=0.222 Sum_probs=153.6
Q ss_pred CccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEcc
Q 005864 89 NLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLN 168 (673)
Q Consensus 89 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~ 168 (673)
+|++|+|++|.+++..+..|.++++|++|++++|.++...+..|..+++|++|++++|.+++..+..+..+++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45555555555554444455555555555555555555555555666666666666666665555666777777777777
Q ss_pred CccccccCCccccCCCCCCEEEeCCCCCCCc-CCccccccccccEEEccCCcCccCCchhhhcccCCC----eEeecCCc
Q 005864 169 GNKLSGNLPRVLGSLSELEYLDLSTNKLSGS-IPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLS----ELDLSHNF 243 (673)
Q Consensus 169 ~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~-~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~----~L~ls~N~ 243 (673)
+|.+++..+..+..+++|++|++++|.+++. +|..+..+++|+.|++++|++++..+..+..+.+|+ .|++++|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 7777766555677788888888888888753 577888888888888888888887777777777777 89999999
Q ss_pred CCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCC
Q 005864 244 LGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNS 299 (673)
Q Consensus 244 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~ 299 (673)
+.+..+.. ....+|+.|++++|++++..+..|..+++|+.|++++|++.+.+|..
T Consensus 189 l~~~~~~~-~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 189 MNFIQPGA-FKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp CCEECTTS-SCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred ccccCccc-cCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 98544444 44458999999999999888888899999999999999999988754
|
| >2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.8e-26 Score=226.81 Aligned_cols=223 Identities=22% Similarity=0.237 Sum_probs=123.0
Q ss_pred EEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCcc
Q 005864 21 LYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNF 100 (673)
Q Consensus 21 L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i 100 (673)
++..+.+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++++.+..|..+++|++|+|++|.+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 444444444 3444332 3556666666665554444555555555555555555555555555555555555555555
Q ss_pred ccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCcccccc-CCcc
Q 005864 101 YGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN-LPRV 179 (673)
Q Consensus 101 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~-~~~~ 179 (673)
++..+..+.++++|++|++++|.+++. .+..+..+++|++|++++|.+++. +|..
T Consensus 89 ~~~~~~~~~~l~~L~~L~l~~n~l~~~------------------------~~~~~~~l~~L~~L~l~~n~l~~~~l~~~ 144 (276)
T 2z62_A 89 QSLALGAFSGLSSLQKLVAVETNLASL------------------------ENFPIGHLKTLKELNVAHNLIQSFKLPEY 144 (276)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCCCS------------------------TTCCCTTCTTCCEEECCSSCCCCCCCCGG
T ss_pred CccChhhhcCCccccEEECCCCCcccc------------------------CchhcccCCCCCEEECcCCccceecCchh
Confidence 554444555555555555555554433 333344455555555555555532 3455
Q ss_pred ccCCCCCCEEEeCCCCCCCcCCcccccccccc----EEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCC
Q 005864 180 LGSLSELEYLDLSTNKLSGSIPETLGNLLKVH----YLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNL 255 (673)
Q Consensus 180 l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~----~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 255 (673)
+..+++|+.|++++|.+++..+..+..+++|+ .|++++|.+++..+..+.. .+|+.|++++|.+++..+..|..+
T Consensus 145 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l 223 (276)
T 2z62_A 145 FSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRL 223 (276)
T ss_dssp GGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTC
T ss_pred hccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhccc
Confidence 55555666666666655544445555555554 6666666666544444433 366777777777665555556667
Q ss_pred CcccEEEecCcccccc
Q 005864 256 ESLEKLNVSHNNLSGL 271 (673)
Q Consensus 256 ~~L~~L~l~~N~l~~~ 271 (673)
++|+.|++++|++.+.
T Consensus 224 ~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 224 TSLQKIWLHTNPWDCS 239 (276)
T ss_dssp CSCCEEECCSSCBCCC
T ss_pred ccccEEEccCCccccc
Confidence 7777777777776643
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-27 Score=255.85 Aligned_cols=186 Identities=13% Similarity=0.172 Sum_probs=147.9
Q ss_pred CccceeccCCcEEEEEEEeCCCCEEEEEeeccchh-----hhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 405 DAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLL-----SEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 405 ~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
...+.||+|+||+||+|.. .++.+++|+...... ......+.+.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3457899999999999955 578889987644222 1222356689999999999999999777777777888999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+||+++. .+||+|||+++....
T Consensus 418 mE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 418 MSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 999999999999875 457999999999999999 9999999999999998 999999999998754
Q ss_pred CCCC-------ceeccccccccccccccc--CCcCcchhHHHHHHHHHHHHhCCCCC
Q 005864 560 GSSN-------WTEFAGTFGYVAPELAYT--MKVTEKCDVYSFGVLALEVIKGKHPR 607 (673)
Q Consensus 560 ~~~~-------~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~ 607 (673)
.... .....||+.|+|||++.. ..|+..+|+||..+-..+-+.++.+|
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 3221 135679999999999976 56888899999999988888877765
|
| >3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=99.93 E-value=8.5e-25 Score=240.39 Aligned_cols=257 Identities=26% Similarity=0.243 Sum_probs=210.1
Q ss_pred CCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEc
Q 005864 16 TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDI 95 (673)
Q Consensus 16 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 95 (673)
.+++.|++++|.++ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|+|+.++. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSLPV----LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSCCCC----CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCcCCC----CCCCCCEEEC
Confidence 35899999999999 6677665 79999999999998 4554 67999999999999997665 7799999999
Q ss_pred cCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCcccccc
Q 005864 96 SHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175 (673)
Q Consensus 96 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~ 175 (673)
++|+++++.. .+++|+.|++++|+++. +|.. +++|++|++++|++++ +|. .+++|+.|++++|.+++
T Consensus 109 s~N~l~~l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~- 175 (622)
T 3g06_A 109 FSNPLTHLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS- 175 (622)
T ss_dssp CSCCCCCCCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-
T ss_pred cCCcCCCCCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-
Confidence 9999987544 57899999999999995 4543 4899999999999984 443 35789999999999995
Q ss_pred CCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCC
Q 005864 176 LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNL 255 (673)
Q Consensus 176 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 255 (673)
+| ..+++|+.|++++|.+++ +|.. +++|+.|++++|.++.. |.. +++|+.|++++|.+++ +| ..+
T Consensus 176 l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l-~~~---~~~L~~L~Ls~N~L~~-lp---~~l 240 (622)
T 3g06_A 176 LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSL-PAL---PSGLKELIVSGNRLTS-LP---VLP 240 (622)
T ss_dssp CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSC-CCC---CTTCCEEECCSSCCSC-CC---CCC
T ss_pred Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccccc-CCC---CCCCCEEEccCCccCc-CC---CCC
Confidence 45 457899999999999984 5543 47899999999999954 432 4789999999999995 55 556
Q ss_pred CcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCcccccCccccccCCcC
Q 005864 256 ESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRG 315 (673)
Q Consensus 256 ~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~ 315 (673)
++|+.|+|++|+|+++.+ .+++|+.|++++|.++..++............+.+|+.
T Consensus 241 ~~L~~L~Ls~N~L~~lp~----~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~N~l 296 (622)
T 3g06_A 241 SELKELMVSGNRLTSLPM----LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPL 296 (622)
T ss_dssp TTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCSCCC
T ss_pred CcCcEEECCCCCCCcCCc----ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecCCCC
Confidence 899999999999996543 67899999999999995544344445555566777764
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.3e-25 Score=218.87 Aligned_cols=202 Identities=23% Similarity=0.304 Sum_probs=113.5
Q ss_pred CCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEcc
Q 005864 17 NLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDIS 96 (673)
Q Consensus 17 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 96 (673)
+.+++++++++++ .+|..+. ++|+.|+|++|+++...+.+|.++++|++|+|++|+++.+++..|..+++|++|+|+
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 4556666666666 3444333 456666666666654444555556666666666665555555555555555555555
Q ss_pred CCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccC
Q 005864 97 HNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNL 176 (673)
Q Consensus 97 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 176 (673)
+|.++...+..|..+++|++|++++|.++.. .+..+..+++|++|+|++|.+++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~------------------------~~~~~~~l~~L~~L~Ls~n~l~~~~ 149 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSL------------------------PPRVFDSLTKLTYLSLGYNELQSLP 149 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCC------------------------CTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCee------------------------CHHHhCcCcCCCEEECCCCcCCccC
Confidence 5555544444455555555555555555444 4444455555555555555555444
Q ss_pred CccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCC
Q 005864 177 PRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLG 245 (673)
Q Consensus 177 ~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~ 245 (673)
+..|..+++|+.|++++|.+++..+..|..+++|+.|++++|++++..+..|..+++|+.|++++|++.
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 444555566666666666665444445555666666666666666555555666666666666666665
|
| >2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.93 E-value=6.8e-25 Score=218.09 Aligned_cols=206 Identities=23% Similarity=0.257 Sum_probs=127.3
Q ss_pred CCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccc
Q 005864 65 SLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFS 144 (673)
Q Consensus 65 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~ 144 (673)
+++.+++++++++.++... .++|++|+|++|.++.+.+..|.++++|++|+|++|.++...+..|
T Consensus 17 ~~~~l~~~~~~l~~ip~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~------------ 81 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIPSNI---PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIF------------ 81 (270)
T ss_dssp TTTEEECTTSCCSSCCSCC---CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTT------------
T ss_pred CCCEEEccCCCCCccCCCC---CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhh------------
Confidence 4566777777766544322 1456666666666665555555555666666666555554333334
Q ss_pred cccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCC
Q 005864 145 LNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEF 224 (673)
Q Consensus 145 ~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~ 224 (673)
..+++|++|++++|++++..+..|..+++|++|++++|.+++..+..|..+++|+.|++++|.+++..
T Consensus 82 ------------~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 149 (270)
T 2o6q_A 82 ------------KELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLP 149 (270)
T ss_dssp ------------SSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred ------------cCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccC
Confidence 44455555555555555444444555555666666666665555555566666666666666666555
Q ss_pred chhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCC
Q 005864 225 PVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIP 297 (673)
Q Consensus 225 ~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~ 297 (673)
+..|..+++|+.|++++|.+++..+..|..+++|++|+|++|++++..+..|..+++|+.|++++|++.+..+
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 5556666677777777777765555566777777777777777777666667777788888888887776654
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-25 Score=222.83 Aligned_cols=160 Identities=26% Similarity=0.267 Sum_probs=81.7
Q ss_pred hhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCcccccccccc
Q 005864 132 IGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVH 211 (673)
Q Consensus 132 l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 211 (673)
+..+++|++|++++|.+++..+..+..+++|++|++++|++++..+..|..+++|++|++++|.+++..+..+..+++|+
T Consensus 81 l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 160 (272)
T 3rfs_A 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLT 160 (272)
T ss_dssp GTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred hcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCC
Confidence 34444444444444444433333344444555555555555444444444555555555555555544444445555555
Q ss_pred EEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCcc
Q 005864 212 YLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNE 291 (673)
Q Consensus 212 ~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~ 291 (673)
.|++++|++++..+..|..+++|+.|++++|.+++..+..+..+++|+.|++++|++.+. ++.|+.+++++|.
T Consensus 161 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~ 233 (272)
T 3rfs_A 161 ELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINK 233 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHH
T ss_pred EEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHh
Confidence 555555555544444455555555555555555554444455555555555555555432 3345566666666
Q ss_pred ccCCCCC
Q 005864 292 LLGLIPN 298 (673)
Q Consensus 292 l~~~~~~ 298 (673)
++|.+|.
T Consensus 234 ~~g~ip~ 240 (272)
T 3rfs_A 234 HSGVVRN 240 (272)
T ss_dssp TGGGBBC
T ss_pred CCCcccC
Confidence 6666554
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.9e-26 Score=238.31 Aligned_cols=255 Identities=20% Similarity=0.204 Sum_probs=135.4
Q ss_pred EEeeCCccccCCCccccCCCCCCEEEcccCccccccC----ccccCCC-CCcEEEccCcccccccccccCCC-----CCc
Q 005864 21 LYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIP----RSLRNLA-SLNRVHLEQNHLTGNISEVFGIY-----PNL 90 (673)
Q Consensus 21 L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~----~~l~~l~-~L~~L~L~~n~i~~~~~~~~~~l-----~~L 90 (673)
+.|++|.+++..|..+...++|++|+|++|.+++..+ .+|..++ +|++|+|++|+++...+..|..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4566666666666555555556666666666665544 5555666 66666666666665544444442 566
Q ss_pred cEEEccCCccccccccCccc----c-CCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccC-CCCCCE
Q 005864 91 TFLDISHNNFYGEIWSSWGK----C-QQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGN-LKSLNY 164 (673)
Q Consensus 91 ~~L~L~~n~i~~~~~~~~~~----l-~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~-l~~L~~ 164 (673)
++|+|++|.+++..+..+.. + ++|++|+|++|.++...+..+... +.. .++|++
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~--------------------l~~~~~~L~~ 142 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQA--------------------FSNLPASITS 142 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH--------------------HTTSCTTCCE
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHH--------------------HHhCCCceeE
Confidence 66666666655444433222 2 455555555555554433333221 112 135555
Q ss_pred EEccCccccccC----CccccCCC-CCCEEEeCCCCCCCcCCcccc----cc-ccccEEEccCCcCccCC----chhhhc
Q 005864 165 LVLNGNKLSGNL----PRVLGSLS-ELEYLDLSTNKLSGSIPETLG----NL-LKVHYLNLSNNQFRKEF----PVELEK 230 (673)
Q Consensus 165 L~L~~n~l~~~~----~~~l~~l~-~L~~L~l~~n~l~~~~~~~l~----~l-~~L~~L~l~~n~l~~~~----~~~~~~ 230 (673)
|+|++|.+++.. +..+..++ +|++|+|++|.+++..+..+. .+ ++|+.|+|++|.+++.. +..+..
T Consensus 143 L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~ 222 (362)
T 3goz_A 143 LNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSS 222 (362)
T ss_dssp EECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHH
T ss_pred EEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhc
Confidence 555555555322 22223333 566666666665544443332 22 36666666666665432 223333
Q ss_pred -ccCCCeEeecCCcCCCCCcc----cccCCCcccEEEecCccccccCc-------cccccCCCccEEEccCccccCC
Q 005864 231 -LVQLSELDLSHNFLGGEIPP----QICNLESLEKLNVSHNNLSGLIP-------SCFEGMHGLSCIDISYNELLGL 295 (673)
Q Consensus 231 -l~~L~~L~ls~N~l~~~~~~----~~~~l~~L~~L~l~~N~l~~~~~-------~~~~~~~~L~~l~l~~N~l~~~ 295 (673)
.++|+.|+|++|.+++..+. .+..+++|+.|+|++|.+.+..+ ..+..+++|+.||+++|++...
T Consensus 223 ~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp SCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred CCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 23666666666666654332 23455667777777776444333 2455666677777777776543
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=217.38 Aligned_cols=202 Identities=25% Similarity=0.253 Sum_probs=91.6
Q ss_pred ccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCc
Q 005864 36 IGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLG 115 (673)
Q Consensus 36 ~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 115 (673)
+.++++|+.+++++|+++ .+|..+. ++|+.|+|++|+++++.+..|..+++|++|+|++|.++++... +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 445555556666555555 3333322 4555555555555555555555555555555555555433221 3333444
Q ss_pred EEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCC
Q 005864 116 TLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNK 195 (673)
Q Consensus 116 ~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 195 (673)
+|+|++|.++ .+|..+..+++|++|++++|++++..+..|..+++|+.|++++|.
T Consensus 81 ~L~Ls~N~l~-------------------------~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 135 (290)
T 1p9a_G 81 TLDLSHNQLQ-------------------------SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE 135 (290)
T ss_dssp EEECCSSCCS-------------------------SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-------------------------cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCC
Confidence 4444444333 223333444444444444444443333444444444444444444
Q ss_pred CCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccc
Q 005864 196 LSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNL 268 (673)
Q Consensus 196 l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l 268 (673)
+++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+++ .+|..+..+.+|+.|+|++|++
T Consensus 136 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred CCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 44333333444444444444444444333333444444444444444444 3333333334444444444433
|
| >1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-24 Score=216.33 Aligned_cols=204 Identities=23% Similarity=0.248 Sum_probs=164.0
Q ss_pred cccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCc
Q 005864 11 SVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNL 90 (673)
Q Consensus 11 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 90 (673)
.++++++++++++++++++ .+|..+. ++|+.|+|++|.+++..+..|..+++|+.|+|++|+|+.+... ..+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 4788999999999999999 5565554 6899999999999988889999999999999999999977553 789999
Q ss_pred cEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCc
Q 005864 91 TFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGN 170 (673)
Q Consensus 91 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n 170 (673)
++|+|++|.++. .+..+..+++|+.|++++|+++...+..|..+++|++|+|++|+++...+..|..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~~-l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQS-LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCSS-CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCCc-CchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 999999999984 4567788899999999999998777777888888888888888877666666677777777777777
Q ss_pred cccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCc
Q 005864 171 KLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFR 221 (673)
Q Consensus 171 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 221 (673)
+++...+..|..+++|+.|+|++|.++ .+|..+...++|+.|+|++|++.
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 777555556667777777777777776 55666666666666666666654
|
| >3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5e-25 Score=219.23 Aligned_cols=229 Identities=19% Similarity=0.185 Sum_probs=182.4
Q ss_pred CCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEc
Q 005864 16 TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDI 95 (673)
Q Consensus 16 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 95 (673)
.++..+.+..+.+... ..+..+++|+.|++++|.+.. ...+..+++|++|+|++|.+++. ..+..+++|++|+|
T Consensus 19 ~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~--~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L 92 (272)
T 3rfs_A 19 AETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS--VQGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLIL 92 (272)
T ss_dssp HHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC--CTTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEEC
T ss_pred HHHHHHHhcCcccccc--cccccccceeeeeeCCCCccc--ccccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEEC
Confidence 3455566666666633 345677888888888888763 23577888888888888888764 36778888888888
Q ss_pred cCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCcccccc
Q 005864 96 SHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175 (673)
Q Consensus 96 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~ 175 (673)
++|.+++..+..+.++++|++|++++|++++..+..|..+++|++|++++|.+++..+..+..+++|+.|++++|++++.
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 172 (272)
T 3rfs_A 93 TGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSL 172 (272)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCcc
Confidence 88888877777788888888888888888877777788888888888888888866666778888999999999998877
Q ss_pred CCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCC
Q 005864 176 LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNL 255 (673)
Q Consensus 176 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 255 (673)
.+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+.+. +++|+.|+++.|.++|.+|..++.+
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 173 PEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred CHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccccc
Confidence 777788889999999999999877777788889999999999988753 4478888999999998888887766
Q ss_pred Cc
Q 005864 256 ES 257 (673)
Q Consensus 256 ~~ 257 (673)
..
T Consensus 246 ~~ 247 (272)
T 3rfs_A 246 AP 247 (272)
T ss_dssp CG
T ss_pred CC
Confidence 54
|
| >3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-26 Score=238.89 Aligned_cols=254 Identities=18% Similarity=0.191 Sum_probs=165.3
Q ss_pred CCCccccCCCcccCCCCCCEEEeeCCccccCCC----ccccCCC-CCCEEEcccCccccccCccccCC-----CCCcEEE
Q 005864 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVP----GEIGNLM-QLTNLEIDNNQLFGQIPRSLRNL-----ASLNRVH 70 (673)
Q Consensus 1 ~n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~----~~~~~l~-~L~~L~L~~n~i~~~~~~~l~~l-----~~L~~L~ 70 (673)
.|++++.+|..+...++|++|+|++|.+++..+ ..|.+++ +|++|+|++|.+++..+..+..+ ++|++|+
T Consensus 7 ~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~ 86 (362)
T 3goz_A 7 LHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLN 86 (362)
T ss_dssp CCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEE
T ss_pred cccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEE
Confidence 478999999998888889999999999998777 7888999 99999999999998878777775 9999999
Q ss_pred ccCcccccccccc----cCCC-CCccEEEccCCccccccccCccc-----cCCCcEEEcccCccCccCChhh----hccc
Q 005864 71 LEQNHLTGNISEV----FGIY-PNLTFLDISHNNFYGEIWSSWGK-----CQQLGTLNFSMNNITGSIPPEI----GKLY 136 (673)
Q Consensus 71 L~~n~i~~~~~~~----~~~l-~~L~~L~L~~n~i~~~~~~~~~~-----l~~L~~L~L~~n~l~~~~~~~l----~~l~ 136 (673)
|++|++++..+.. +..+ ++|++|+|++|.+++.....+.. .++|++|+|++|.++...+..+ ..++
T Consensus 87 Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~ 166 (362)
T 3goz_A 87 LSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIP 166 (362)
T ss_dssp CCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSC
T ss_pred CcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCC
Confidence 9999999776664 4444 89999999999998776655543 3689999999998886444333 3333
Q ss_pred -cccccccccccccccCCccc----cCC-CCCCEEEccCcccccc----CCccccC-CCCCCEEEeCCCCCCCcCC----
Q 005864 137 -QLHKLDFSLNQIVGEIPIEL----GNL-KSLNYLVLNGNKLSGN----LPRVLGS-LSELEYLDLSTNKLSGSIP---- 201 (673)
Q Consensus 137 -~L~~L~l~~n~i~~~~~~~l----~~l-~~L~~L~L~~n~l~~~----~~~~l~~-l~~L~~L~l~~n~l~~~~~---- 201 (673)
+|++|+|++|++++..+..+ ..+ ++|++|+|++|.+++. ++..+.. .++|+.|+|++|.+++..+
T Consensus 167 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~ 246 (362)
T 3goz_A 167 ANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLK 246 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHH
T ss_pred ccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHH
Confidence 66666666666654433222 223 3555555555555531 2222222 2345555555555543222
Q ss_pred ccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCcccccc
Q 005864 202 ETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGL 271 (673)
Q Consensus 202 ~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 271 (673)
..+..+++|+.|++++|.+.+..+..+. .++..+..+++|+.|++++|++...
T Consensus 247 ~~~~~l~~L~~L~L~~n~l~~i~~~~~~-----------------~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 247 LLKDSLKHLQTVYLDYDIVKNMSKEQCK-----------------ALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HTTTTTTTCSEEEEEHHHHTTCCHHHHH-----------------HHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHhcCCCccEEEeccCCccccCHHHHH-----------------HHHHHhccCCceEEEecCCCcCCCc
Confidence 1123334444444444443322222111 1122345556666666666666544
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-26 Score=240.45 Aligned_cols=259 Identities=17% Similarity=0.143 Sum_probs=181.1
Q ss_pred CCCccccCCCCCCEEEcccCccccccC----ccccCCCCCcEEEccCcccc---cccccc-------cCCCCCccEEEcc
Q 005864 31 SVPGEIGNLMQLTNLEIDNNQLFGQIP----RSLRNLASLNRVHLEQNHLT---GNISEV-------FGIYPNLTFLDIS 96 (673)
Q Consensus 31 ~~~~~~~~l~~L~~L~L~~n~i~~~~~----~~l~~l~~L~~L~L~~n~i~---~~~~~~-------~~~l~~L~~L~L~ 96 (673)
.++..+..+++|++|+|++|.++...+ ..|..+++|++|+|++|.+. +..+.. |..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 455667777788888888887775533 33667788888888876544 222222 3677888888888
Q ss_pred CCcccc----ccccCccccCCCcEEEcccCccCccCChhhh----cc---------ccccccccccccccc-cCC---cc
Q 005864 97 HNNFYG----EIWSSWGKCQQLGTLNFSMNNITGSIPPEIG----KL---------YQLHKLDFSLNQIVG-EIP---IE 155 (673)
Q Consensus 97 ~n~i~~----~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~----~l---------~~L~~L~l~~n~i~~-~~~---~~ 155 (673)
+|.++. ..+..+..+++|++|+|++|.++...+..+. .+ ++|++|++++|+++. ..+ ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 888876 3455667778888888888887644333333 33 788888888888862 233 35
Q ss_pred ccCCCCCCEEEccCccccc-----cCCccccCCCCCCEEEeCCCCCC----CcCCccccccccccEEEccCCcCccC---
Q 005864 156 LGNLKSLNYLVLNGNKLSG-----NLPRVLGSLSELEYLDLSTNKLS----GSIPETLGNLLKVHYLNLSNNQFRKE--- 223 (673)
Q Consensus 156 l~~l~~L~~L~L~~n~l~~-----~~~~~l~~l~~L~~L~l~~n~l~----~~~~~~l~~l~~L~~L~l~~n~l~~~--- 223 (673)
+..+++|++|+|++|+++. ..+..+..+++|+.|+|++|.++ ..+|..+..+++|+.|+|++|.+++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 6677888888888888873 23336778888888888888885 45677788888888888888888765
Q ss_pred -Cchhhhc--ccCCCeEeecCCcCCC----CCcccc-cCCCcccEEEecCccccccCc--ccc-ccCCCccEEEccC
Q 005864 224 -FPVELEK--LVQLSELDLSHNFLGG----EIPPQI-CNLESLEKLNVSHNNLSGLIP--SCF-EGMHGLSCIDISY 289 (673)
Q Consensus 224 -~~~~~~~--l~~L~~L~ls~N~l~~----~~~~~~-~~l~~L~~L~l~~N~l~~~~~--~~~-~~~~~L~~l~l~~ 289 (673)
++..+.. +++|+.|+|++|.+++ .+|..+ .++++|+.|++++|++++..+ ..+ ..++.++.+++..
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~~~~~l~~~l~~~~~~~l~~ 339 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFSTRGRGELDE 339 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSHHHHHHHHHHHHHTCCEECC
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchhHHHHHHHHhhhcCcchhhh
Confidence 3445533 7888999999998886 366666 557889999999998887763 222 2344554444433
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.5e-24 Score=208.12 Aligned_cols=199 Identities=17% Similarity=0.175 Sum_probs=103.7
Q ss_pred CCCEEEcccCccccccCccccCCCCCcEEEccCcc-cccccccccCCCCCccEEEccC-CccccccccCccccCCCcEEE
Q 005864 41 QLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNH-LTGNISEVFGIYPNLTFLDISH-NNFYGEIWSSWGKCQQLGTLN 118 (673)
Q Consensus 41 ~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~-i~~~~~~~~~~l~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~ 118 (673)
+|++|++++|+++...+..|.++++|++|++++|+ ++.+.+..|..+++|++|+|++ |.++.+.+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 56666666666655444455556666666666654 5555555555555555555555 555555555555555555555
Q ss_pred cccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCc-cccccCCccccCCCCCC-EEEeCCCCC
Q 005864 119 FSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGN-KLSGNLPRVLGSLSELE-YLDLSTNKL 196 (673)
Q Consensus 119 L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n-~l~~~~~~~l~~l~~L~-~L~l~~n~l 196 (673)
+++|.+++ +|. +..+++|+ .|++|++++| .+++..+..|..+++|+ .|++++|.+
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~---------------------~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTD---------------------IFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGF 168 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCC---------------------SEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCC
T ss_pred CCCCCCcc-ccc-cccccccc---------------------cccEEECCCCcchhhcCcccccchhcceeEEEcCCCCC
Confidence 55555553 222 33333333 0005555555 44444444455555555 555555555
Q ss_pred CCcCCccccccccccEEEccCCc-CccCCchhhhcc-cCCCeEeecCCcCCCCCcccccCCCcccEEEecCc
Q 005864 197 SGSIPETLGNLLKVHYLNLSNNQ-FRKEFPVELEKL-VQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHN 266 (673)
Q Consensus 197 ~~~~~~~l~~l~~L~~L~l~~n~-l~~~~~~~~~~l-~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N 266 (673)
+...+..+.. ++|+.|++++|+ +++..+..|..+ ++|+.|++++|++++ +|.. .+++|+.|+++++
T Consensus 169 ~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 169 TSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred cccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 5222222322 555666666663 555555555555 566666666666652 3322 4556666666554
|
| >2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.8e-24 Score=207.34 Aligned_cols=203 Identities=20% Similarity=0.204 Sum_probs=163.9
Q ss_pred cCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCc-cccccCccccCCCCCcEEEccC-ccccccccccc
Q 005864 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQ-LFGQIPRSLRNLASLNRVHLEQ-NHLTGNISEVF 84 (673)
Q Consensus 7 ~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~l~~l~~L~~L~L~~-n~i~~~~~~~~ 84 (673)
.+|. +. ++|++|+|++|+++++.+..|+++++|++|++++|+ ++...+.+|.++++|++|++++ |+++.+++..|
T Consensus 25 ~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f 101 (239)
T 2xwt_C 25 RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDAL 101 (239)
T ss_dssp SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSE
T ss_pred ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHh
Confidence 5676 54 489999999999998888899999999999999997 8877778999999999999999 99999999999
Q ss_pred CCCCCccEEEccCCccccccccCccccCCCc---EEEcccC-ccCccCChhhhcccccc-ccccccccccccCCccccCC
Q 005864 85 GIYPNLTFLDISHNNFYGEIWSSWGKCQQLG---TLNFSMN-NITGSIPPEIGKLYQLH-KLDFSLNQIVGEIPIELGNL 159 (673)
Q Consensus 85 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~---~L~L~~n-~l~~~~~~~l~~l~~L~-~L~l~~n~i~~~~~~~l~~l 159 (673)
..+++|++|++++|.+++.+ . +..+++|+ .|++++| .++...+..|..+++|+ +|++++|+++...+..+..
T Consensus 102 ~~l~~L~~L~l~~n~l~~lp-~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~- 178 (239)
T 2xwt_C 102 KELPLLKFLGIFNTGLKMFP-D-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG- 178 (239)
T ss_dssp ECCTTCCEEEEEEECCCSCC-C-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-
T ss_pred CCCCCCCEEeCCCCCCcccc-c-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-
Confidence 99999999999999998743 3 88888888 9999999 88877777788888888 8888888887433333433
Q ss_pred CCCCEEEccCcc-ccccCCccccCC-CCCCEEEeCCCCCCCcCCccccccccccEEEccCC
Q 005864 160 KSLNYLVLNGNK-LSGNLPRVLGSL-SELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNN 218 (673)
Q Consensus 160 ~~L~~L~L~~n~-l~~~~~~~l~~l-~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n 218 (673)
++|+.|++++|+ ++...+..|..+ ++|+.|++++|.+++ +|.. .+++|+.|+++++
T Consensus 179 ~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 179 TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 778888888884 776666667777 777777777777763 3332 4556666666654
|
| >2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.3e-26 Score=240.31 Aligned_cols=250 Identities=18% Similarity=0.211 Sum_probs=202.0
Q ss_pred EcccCccccccCccccCCCCCcEEEccCcccccccc----cccCCCCCccEEEccCCccc---cccccCc-------ccc
Q 005864 46 EIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS----EVFGIYPNLTFLDISHNNFY---GEIWSSW-------GKC 111 (673)
Q Consensus 46 ~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~----~~~~~l~~L~~L~L~~n~i~---~~~~~~~-------~~l 111 (673)
.++...+. .++..+..+++|++|+|++|+++...+ ..|..+++|++|+|++|.+. +..+..+ ..+
T Consensus 15 ~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~ 93 (386)
T 2ca6_A 15 AITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKC 93 (386)
T ss_dssp SCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTC
T ss_pred CCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhC
Confidence 33444443 566788899999999999999996644 44778999999999997544 3333333 688
Q ss_pred CCCcEEEcccCccCc----cCChhhhccccccccccccccccccCCcccc----CC---------CCCCEEEccCccccc
Q 005864 112 QQLGTLNFSMNNITG----SIPPEIGKLYQLHKLDFSLNQIVGEIPIELG----NL---------KSLNYLVLNGNKLSG 174 (673)
Q Consensus 112 ~~L~~L~L~~n~l~~----~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~----~l---------~~L~~L~L~~n~l~~ 174 (673)
++|++|+|++|.++. .++..+..+++|++|+|++|.++...+..+. .+ ++|++|+|++|+++.
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~ 173 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 173 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred CcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCc
Confidence 999999999999997 3677889999999999999999754443333 33 899999999999973
Q ss_pred -cCC---ccccCCCCCCEEEeCCCCCCC-----cCCccccccccccEEEccCCcCc----cCCchhhhcccCCCeEeecC
Q 005864 175 -NLP---RVLGSLSELEYLDLSTNKLSG-----SIPETLGNLLKVHYLNLSNNQFR----KEFPVELEKLVQLSELDLSH 241 (673)
Q Consensus 175 -~~~---~~l~~l~~L~~L~l~~n~l~~-----~~~~~l~~l~~L~~L~l~~n~l~----~~~~~~~~~l~~L~~L~ls~ 241 (673)
..+ ..+..+++|+.|++++|.++. ..+..+..+++|+.|+|++|.++ ..+|..+..+++|+.|+|++
T Consensus 174 ~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~ 253 (386)
T 2ca6_A 174 GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLND 253 (386)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTT
T ss_pred HHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCC
Confidence 333 467788999999999999973 33447889999999999999996 55778889999999999999
Q ss_pred CcCCCC----Ccccc--cCCCcccEEEecCccccc----cCcccc-ccCCCccEEEccCccccCCC
Q 005864 242 NFLGGE----IPPQI--CNLESLEKLNVSHNNLSG----LIPSCF-EGMHGLSCIDISYNELLGLI 296 (673)
Q Consensus 242 N~l~~~----~~~~~--~~l~~L~~L~l~~N~l~~----~~~~~~-~~~~~L~~l~l~~N~l~~~~ 296 (673)
|.+++. ++..+ +.+++|+.|+|++|.+++ .+|..+ .++++|+.|++++|++++..
T Consensus 254 n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 254 CLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp CCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 999865 45666 348999999999999998 467666 66899999999999988654
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.91 E-value=3.1e-25 Score=228.42 Aligned_cols=232 Identities=15% Similarity=0.191 Sum_probs=118.5
Q ss_pred CCCcEEEccCcccccccccccCCCCCccEEEccCCccccc-cccCccccCCCcEEEcccCccCccCChhhhccccccccc
Q 005864 64 ASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGE-IWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLD 142 (673)
Q Consensus 64 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 142 (673)
++++.|++++|.+.+..+. +..+++|++|+|++|.+++. .+..+..+++|++|+|++|.+++..+..+..+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 4444444444444433333 22344444444444444432 333344444555555555544444444444455555555
Q ss_pred cccc-ccccc-CCccccCCCCCCEEEccCc-ccccc-CCccccCCC-CCCEEEeCCC--CCC-CcCCccccccccccEEE
Q 005864 143 FSLN-QIVGE-IPIELGNLKSLNYLVLNGN-KLSGN-LPRVLGSLS-ELEYLDLSTN--KLS-GSIPETLGNLLKVHYLN 214 (673)
Q Consensus 143 l~~n-~i~~~-~~~~l~~l~~L~~L~L~~n-~l~~~-~~~~l~~l~-~L~~L~l~~n--~l~-~~~~~~l~~l~~L~~L~ 214 (673)
+++| .+++. .+..+..+++|++|++++| .+++. ++..+..++ +|++|++++| .++ +.++..+..+++|+.|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 5555 34321 3333445555666666655 55532 334455555 6666666666 333 23444555666666666
Q ss_pred ccCCc-CccCCchhhhcccCCCeEeecCCc-CCCCCcccccCCCcccEEEecCccccccCccccccC-CCccEEEccCcc
Q 005864 215 LSNNQ-FRKEFPVELEKLVQLSELDLSHNF-LGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGM-HGLSCIDISYNE 291 (673)
Q Consensus 215 l~~n~-l~~~~~~~~~~l~~L~~L~ls~N~-l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~-~~L~~l~l~~N~ 291 (673)
+++|. +++..+..+..+++|+.|++++|. +.......+..+++|+.|++++| +.. ..+..+ ..+..|++++|.
T Consensus 229 l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~ 304 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSH 304 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCC
T ss_pred CCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCH---HHHHHHHhhCcceEEeccc
Confidence 66666 555555566666666666666664 22222224566677777777776 332 223332 224555577777
Q ss_pred ccCCCCCCc
Q 005864 292 LLGLIPNST 300 (673)
Q Consensus 292 l~~~~~~~~ 300 (673)
+++..|...
T Consensus 305 l~~~~~~~~ 313 (336)
T 2ast_B 305 FTTIARPTI 313 (336)
T ss_dssp SCCTTCSSC
T ss_pred CccccCCcc
Confidence 777666543
|
| >2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.3e-25 Score=228.26 Aligned_cols=254 Identities=17% Similarity=0.207 Sum_probs=205.1
Q ss_pred CCCEEEeeCCccccCCCccccCC--CCCCEEEcccCccccccCccccCCCCCcEEEccCcccccc-cccccCCCCCccEE
Q 005864 17 NLKGLYLYSNSLSGSVPGEIGNL--MQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGN-ISEVFGIYPNLTFL 93 (673)
Q Consensus 17 ~L~~L~L~~n~i~~~~~~~~~~l--~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L 93 (673)
.++.|+++++.+. +..+..+ ++++.|++++|.+.+..+. +..+++|++|+|++|.++.. .+..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4789999998887 5667777 8999999999999866554 56789999999999998865 66788899999999
Q ss_pred EccCCccccccccCccccCCCcEEEcccC-ccCcc-CChhhhccccccccccccc-ccccc-CCccccCCC-CCCEEEcc
Q 005864 94 DISHNNFYGEIWSSWGKCQQLGTLNFSMN-NITGS-IPPEIGKLYQLHKLDFSLN-QIVGE-IPIELGNLK-SLNYLVLN 168 (673)
Q Consensus 94 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~n-~l~~~-~~~~l~~l~~L~~L~l~~n-~i~~~-~~~~l~~l~-~L~~L~L~ 168 (673)
+|++|.+++..+..++.+++|++|+|++| .+++. .+..+..+++|++|++++| .+++. .+..+..++ +|++|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99999998777888889999999999999 67753 5666888999999999999 88754 466677888 99999999
Q ss_pred Cc--ccc-ccCCccccCCCCCCEEEeCCCC-CCCcCCccccccccccEEEccCCc-CccCCchhhhcccCCCeEeecCCc
Q 005864 169 GN--KLS-GNLPRVLGSLSELEYLDLSTNK-LSGSIPETLGNLLKVHYLNLSNNQ-FRKEFPVELEKLVQLSELDLSHNF 243 (673)
Q Consensus 169 ~n--~l~-~~~~~~l~~l~~L~~L~l~~n~-l~~~~~~~l~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~ls~N~ 243 (673)
+| .++ +.++..+..+++|+.|++++|. +++..+..+..+++|+.|++++|. +.......+..+++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 99 454 3456667789999999999999 776777888999999999999995 33333336788999999999999
Q ss_pred CCCCCcccccCC-CcccEEEecCccccccCcccccc
Q 005864 244 LGGEIPPQICNL-ESLEKLNVSHNNLSGLIPSCFEG 278 (673)
Q Consensus 244 l~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~ 278 (673)
++.. .+..+ ..++.|++++|++++..|..+..
T Consensus 283 i~~~---~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 283 VPDG---TLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp SCTT---CHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred cCHH---HHHHHHhhCcceEEecccCccccCCcccc
Confidence 5533 23333 34777779999999988876654
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.1e-24 Score=215.80 Aligned_cols=224 Identities=16% Similarity=0.157 Sum_probs=166.5
Q ss_pred CCcEEEccCccccccccc---ccCCCCCccEEEccCCccccccccCc--cccCCCcEEEcccCccCccCC----hhhhcc
Q 005864 65 SLNRVHLEQNHLTGNISE---VFGIYPNLTFLDISHNNFYGEIWSSW--GKCQQLGTLNFSMNNITGSIP----PEIGKL 135 (673)
Q Consensus 65 ~L~~L~L~~n~i~~~~~~---~~~~l~~L~~L~L~~n~i~~~~~~~~--~~l~~L~~L~L~~n~l~~~~~----~~l~~l 135 (673)
.++.|.+.++.++..... .+..+++|++|+|++|.+.+..+..+ ..+++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 466677776666522111 11234568888888888877777776 778888888888888876444 344567
Q ss_pred ccccccccccccccccCCccccCCCCCCEEEccCcccccc---C-CccccCCCCCCEEEeCCCCCCCcCCc----ccccc
Q 005864 136 YQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN---L-PRVLGSLSELEYLDLSTNKLSGSIPE----TLGNL 207 (673)
Q Consensus 136 ~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~---~-~~~l~~l~~L~~L~l~~n~l~~~~~~----~l~~l 207 (673)
++|++|++++|++.+..+..+..+++|++|+|++|++.+. . +..+..+++|++|++++|.++ .++. .+..+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 8888888888888877778888888888888888887642 1 233467888999999999886 3333 24677
Q ss_pred ccccEEEccCCcCccCCchhhhcc---cCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccE
Q 005864 208 LKVHYLNLSNNQFRKEFPVELEKL---VQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSC 284 (673)
Q Consensus 208 ~~L~~L~l~~n~l~~~~~~~~~~l---~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~ 284 (673)
++|++|+|++|++++..|..+..+ ++|+.|+|++|+++ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~ 298 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDN 298 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccE
Confidence 889999999999988777766666 68999999999998 6676664 7899999999999876 32 678899999
Q ss_pred EEccCccccC
Q 005864 285 IDISYNELLG 294 (673)
Q Consensus 285 l~l~~N~l~~ 294 (673)
|++++|+++.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999998864
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-23 Score=211.14 Aligned_cols=195 Identities=27% Similarity=0.334 Sum_probs=130.8
Q ss_pred ccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCc
Q 005864 36 IGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLG 115 (673)
Q Consensus 36 ~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 115 (673)
++.+++|++|++++|.+.. ++ .+..+++|++|+|++|+++++.+ +..+++|++|+|++|.+++. ..+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCC
Confidence 3455666666666666653 23 46666666666666666665544 66666677777776666543 2466666777
Q ss_pred EEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCC
Q 005864 116 TLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNK 195 (673)
Q Consensus 116 ~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 195 (673)
+|++++|.+++. + .+..+++|++|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|.
T Consensus 111 ~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 111 TLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNK 184 (308)
T ss_dssp EEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCc
Confidence 777777776643 2 36667777777777777764322 6677777777777777774332 7777788888888887
Q ss_pred CCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCC
Q 005864 196 LSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGG 246 (673)
Q Consensus 196 l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~ 246 (673)
+++..+ +..+++|+.|++++|++++.. .+..+++|+.|++++|++++
T Consensus 185 l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 185 ISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred cCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 774432 677778888888888887644 36777788888888888763
|
| >4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-23 Score=213.00 Aligned_cols=225 Identities=18% Similarity=0.160 Sum_probs=185.8
Q ss_pred CCCCEEEeeCCccccCCCc---cccCCCCCCEEEcccCccccccCccc--cCCCCCcEEEccCcccccccc----cccCC
Q 005864 16 TNLKGLYLYSNSLSGSVPG---EIGNLMQLTNLEIDNNQLFGQIPRSL--RNLASLNRVHLEQNHLTGNIS----EVFGI 86 (673)
Q Consensus 16 ~~L~~L~L~~n~i~~~~~~---~~~~l~~L~~L~L~~n~i~~~~~~~l--~~l~~L~~L~L~~n~i~~~~~----~~~~~ 86 (673)
..++.|.+.++.++..... .+..+++|++|+|++|.+.+..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 4578899988887632111 12345779999999999998889888 899999999999999996433 44567
Q ss_pred CCCccEEEccCCccccccccCccccCCCcEEEcccCccCcc----CChhhhccccccccccccccccccCCc----cccC
Q 005864 87 YPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGS----IPPEIGKLYQLHKLDFSLNQIVGEIPI----ELGN 158 (673)
Q Consensus 87 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~l~~n~i~~~~~~----~l~~ 158 (673)
+++|++|+|++|.+.+..+..++.+++|++|+|++|++.+. .+..+..+++|++|++++|+++. .+. .+..
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhc
Confidence 99999999999999988889999999999999999998742 12345788999999999999972 222 2567
Q ss_pred CCCCCEEEccCccccccCCccccCC---CCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCC
Q 005864 159 LKSLNYLVLNGNKLSGNLPRVLGSL---SELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLS 235 (673)
Q Consensus 159 l~~L~~L~L~~n~l~~~~~~~l~~l---~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 235 (673)
+++|++|+|++|++++..|..+..+ ++|++|++++|.++ .+|..+. ++|+.|+|++|++++. |. +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 8999999999999998877777766 69999999999999 6777764 7999999999999975 33 67889999
Q ss_pred eEeecCCcCCC
Q 005864 236 ELDLSHNFLGG 246 (673)
Q Consensus 236 ~L~ls~N~l~~ 246 (673)
.|++++|++++
T Consensus 298 ~L~L~~N~l~~ 308 (310)
T 4glp_A 298 NLTLDGNPFLV 308 (310)
T ss_dssp CEECSSTTTSC
T ss_pred EEECcCCCCCC
Confidence 99999999974
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-23 Score=209.20 Aligned_cols=155 Identities=19% Similarity=0.144 Sum_probs=123.4
Q ss_pred HHHHHHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhh---------------HHHHHHHHHHHHHhccC
Q 005864 395 EEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEI---------------SVQREFLNEIKALTEIR 459 (673)
Q Consensus 395 ~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~---------------~~~~~~~~e~~~l~~l~ 459 (673)
..+......|.+.+.||+|+||.||+|.+.+|+.||+|.++....... .....+.+|+.++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 444555667888899999999999999887899999999864322110 23567899999999999
Q ss_pred CCcccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeE
Q 005864 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVL 539 (673)
Q Consensus 460 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil 539 (673)
| +++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||.|||+. +|+||||||+||+
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NIL 225 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVL 225 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEE
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEE
Confidence 5 677776543 55699999999999998 432 12346999999999999999 9999999999999
Q ss_pred eCCCCceEEecccceeecCCCCCCceecccccccccccccc
Q 005864 540 LSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAY 580 (673)
Q Consensus 540 l~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 580 (673)
++ ++.+||+|||+++.. ..|+|||++.
T Consensus 226 l~-~~~vkl~DFG~a~~~-------------~~~~a~e~l~ 252 (282)
T 1zar_A 226 VS-EEGIWIIDFPQSVEV-------------GEEGWREILE 252 (282)
T ss_dssp EE-TTEEEECCCTTCEET-------------TSTTHHHHHH
T ss_pred EE-CCcEEEEECCCCeEC-------------CCCCHHHHHH
Confidence 99 999999999999743 3468888864
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=199.87 Aligned_cols=182 Identities=23% Similarity=0.265 Sum_probs=134.6
Q ss_pred CCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeC
Q 005864 113 QLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLS 192 (673)
Q Consensus 113 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~ 192 (673)
..+.++++++.++ .+|..+. ++|+.|+|++|.+++..+..+..+++|++|+|++|.+++..+..|..+++|++|+++
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4456666666666 3444333 466777777777776666667777777777777777776666667777777777777
Q ss_pred CCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccC
Q 005864 193 TNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLI 272 (673)
Q Consensus 193 ~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 272 (673)
+|.+++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+++..+..|..+++|++|+|++|++++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 77777666667777778888888888887766666777888888888888888666667788888888888888888777
Q ss_pred ccccccCCCccEEEccCccccCCCC
Q 005864 273 PSCFEGMHGLSCIDISYNELLGLIP 297 (673)
Q Consensus 273 ~~~~~~~~~L~~l~l~~N~l~~~~~ 297 (673)
+..|..+++|+.|++++|++.+...
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBCTTST
T ss_pred HHHHhCCCCCCEEEeeCCceeCCcc
Confidence 7778888888888888888877643
|
| >1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 | Back alignment and structure |
|---|
Probab=99.89 E-value=4.9e-23 Score=208.51 Aligned_cols=195 Identities=21% Similarity=0.305 Sum_probs=104.0
Q ss_pred ccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhcccccc
Q 005864 60 LRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLH 139 (673)
Q Consensus 60 l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 139 (673)
+..+++|++|++++|.++.+. .+..+++|++|+|++|.+++..+ +..+++|++|+|++|.+++. ..+.
T Consensus 37 ~~~l~~L~~L~l~~~~i~~l~--~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~------ 104 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTTIE--GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIA------ 104 (308)
T ss_dssp HHHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGT------
T ss_pred HHHcCCcCEEEeeCCCccCch--hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhc------
Confidence 345556666666666665432 35555666666666666554433 55555555555555555532 2344
Q ss_pred ccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCc
Q 005864 140 KLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQ 219 (673)
Q Consensus 140 ~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 219 (673)
.+++|++|++++|++++. + .+..+++|+.|++++|.+++..+ +..+++|+.|++++|+
T Consensus 105 ------------------~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~ 162 (308)
T 1h6u_A 105 ------------------GLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQ 162 (308)
T ss_dssp ------------------TCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSC
T ss_pred ------------------CCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCc
Confidence 445555555555555432 1 24555555555555555543222 5555555555555555
Q ss_pred CccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccC
Q 005864 220 FRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLG 294 (673)
Q Consensus 220 l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~ 294 (673)
+++..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|++++..+ +..+++|+.|++++|++++
T Consensus 163 l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 163 VSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred CCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 554322 5555556666666665553322 5555666666666666655432 5556666666666666654
|
| >3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-22 Score=197.72 Aligned_cols=179 Identities=26% Similarity=0.282 Sum_probs=98.3
Q ss_pred CCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEcc
Q 005864 17 NLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDIS 96 (673)
Q Consensus 17 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 96 (673)
+.++++++++.++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|+++++.+..|..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3455556655555 3343333 355555555555555555555555555555555555555555555555555555555
Q ss_pred CCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccC
Q 005864 97 HNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNL 176 (673)
Q Consensus 97 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~ 176 (673)
+|+++...+..|..+++|++|+|++| ++++..+..+..+++|++|+|++|++++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N------------------------~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 147 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGN------------------------QLKSLPSGVFDRLTKLKELRLNTNQLQSIP 147 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSS------------------------CCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCC------------------------cCCCcChhHhccCCcccEEECcCCcCCccC
Confidence 55555444444444445555555444 444333334455555666666666655444
Q ss_pred CccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCcc
Q 005864 177 PRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRK 222 (673)
Q Consensus 177 ~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~ 222 (673)
+..|..+++|+.|+|++|.+++..+..|..+++|+.|++++|++..
T Consensus 148 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 148 AGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred HHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 4455566666666666666665555556666666666666666654
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.7e-22 Score=206.18 Aligned_cols=241 Identities=18% Similarity=0.110 Sum_probs=120.4
Q ss_pred CEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccc-ccccccCCCCCccE-EEcc
Q 005864 19 KGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTG-NISEVFGIYPNLTF-LDIS 96 (673)
Q Consensus 19 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~-L~L~ 96 (673)
++++.++++++ .+|..+. +++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+ +...+|.++++|.+ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 45666666666 4454442 466667777776665444566666666666666666533 44455666666554 4444
Q ss_pred CCccccccccCccccCCCcEEEcccCccCccCChhhhcccccccccccc-ccccccCCccccCCCCCCEEEccCcccccc
Q 005864 97 HNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSL-NQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175 (673)
Q Consensus 97 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~-n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~ 175 (673)
+|+++.+.+..|..+++|++|++++|+++...+..+....++..|++.+ +.+....+..|..+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~--------------- 153 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS--------------- 153 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSB---------------
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcc---------------
Confidence 5666666566666666666666666666644444444444444555433 334333333333332
Q ss_pred CCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccC-CcCccCCchhhhcccCCCeEeecCCcCCCCCcccccC
Q 005864 176 LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSN-NQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICN 254 (673)
Q Consensus 176 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 254 (673)
..++.|++++|.++ .++......++|+.|++++ |.++.+.+..|..+++|+.|++++|+|+...+..
T Consensus 154 --------~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~--- 221 (350)
T 4ay9_X 154 --------FESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG--- 221 (350)
T ss_dssp --------SSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS---
T ss_pred --------hhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh---
Confidence 13444555555554 2222222334455555542 3444333344555555555555555555222222
Q ss_pred CCcccEEEecCccccccCccccccCCCccEEEccCc
Q 005864 255 LESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYN 290 (673)
Q Consensus 255 l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N 290 (673)
+.+|+.|.+.++.--...| .+..+++|+.++++++
T Consensus 222 ~~~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 222 LENLKKLRARSTYNLKKLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp CTTCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCH
T ss_pred hccchHhhhccCCCcCcCC-CchhCcChhhCcCCCC
Confidence 2333333333332111223 2455555555555443
|
| >4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.1e-22 Score=205.13 Aligned_cols=233 Identities=24% Similarity=0.188 Sum_probs=185.0
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCcccccc-CccccCCCCCcE-EEccCcccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQI-PRSLRNLASLNR-VHLEQNHLTGN 79 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~-~~~l~~l~~L~~-L~L~~n~i~~~ 79 (673)
|+|+ .+|..+. +++++|+|++|+|+.+.+++|+++++|++|+|++|++.+.+ +.+|.++++|++ +.+..|+|+.+
T Consensus 19 ~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l 95 (350)
T 4ay9_X 19 SKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYI 95 (350)
T ss_dssp TTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEE
T ss_pred CCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCccccc
Confidence 5677 7788774 68999999999999877788999999999999999986544 467899999876 66677999999
Q ss_pred cccccCCCCCccEEEccCCccccccccCccccCCCcEEEccc-CccCccCChhhhccc-cccccccccccccccCCcccc
Q 005864 80 ISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM-NNITGSIPPEIGKLY-QLHKLDFSLNQIVGEIPIELG 157 (673)
Q Consensus 80 ~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~-n~l~~~~~~~l~~l~-~L~~L~l~~n~i~~~~~~~l~ 157 (673)
.+..|..+++|++|++++|+++...+..+....++..|++.+ +.+..+.+..|..+. .++.|++++|+|+. ++....
T Consensus 96 ~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f 174 (350)
T 4ay9_X 96 NPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNSAF 174 (350)
T ss_dssp CTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTTSS
T ss_pred CchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-CChhhc
Confidence 999999999999999999999988888888888899999966 678876677777765 68899999999984 444444
Q ss_pred CCCCCCEEEccC-ccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCC-cCccCCchhhhcccCCC
Q 005864 158 NLKSLNYLVLNG-NKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNN-QFRKEFPVELEKLVQLS 235 (673)
Q Consensus 158 ~l~~L~~L~L~~-n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n-~l~~~~~~~~~~l~~L~ 235 (673)
...+|++|++.+ |.++...++.|..+++|+.|++++|+|+...+..|. +|+.|.+.++ .++ ..| .+..+++|+
T Consensus 175 ~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~---~L~~L~~l~~~~l~-~lP-~l~~l~~L~ 249 (350)
T 4ay9_X 175 NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE---NLKKLRARSTYNLK-KLP-TLEKLVALM 249 (350)
T ss_dssp TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT---TCCEEECTTCTTCC-CCC-CTTTCCSCC
T ss_pred cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhc---cchHhhhccCCCcC-cCC-CchhCcChh
Confidence 567899999975 777755556789999999999999999854444444 4455554443 343 444 467778888
Q ss_pred eEeecCCc
Q 005864 236 ELDLSHNF 243 (673)
Q Consensus 236 ~L~ls~N~ 243 (673)
.++++++.
T Consensus 250 ~l~l~~~~ 257 (350)
T 4ay9_X 250 EASLTYPS 257 (350)
T ss_dssp EEECSCHH
T ss_pred hCcCCCCc
Confidence 88887653
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.85 E-value=4.5e-23 Score=229.50 Aligned_cols=286 Identities=13% Similarity=0.085 Sum_probs=173.2
Q ss_pred CCCcccCCCCCCEEEeeCCccccC----CCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccc------
Q 005864 8 IPPSVGNFTNLKGLYLYSNSLSGS----VPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLT------ 77 (673)
Q Consensus 8 ~p~~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~------ 77 (673)
++..+.++++|++|+|++|.+++. .+..+.++++|+.|+|++|.+.+ ++..+..+++|++|+++.+...
T Consensus 184 l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~ 262 (592)
T 3ogk_B 184 LHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEK 262 (592)
T ss_dssp HHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTS
T ss_pred HHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHH
Confidence 344556778888899988888733 33345678888888888888764 5566677777777777642211
Q ss_pred --------------------cccccccCCCCCccEEEccCCccccccc-cCccccCCCcEEEcccCccCc-cCChhhhcc
Q 005864 78 --------------------GNISEVFGIYPNLTFLDISHNNFYGEIW-SSWGKCQQLGTLNFSMNNITG-SIPPEIGKL 135 (673)
Q Consensus 78 --------------------~~~~~~~~~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~-~~~~~l~~l 135 (673)
...+..+..+++|++|+|++|.+++... ..+..+++|++|+++ +.+.. ..+..+..+
T Consensus 263 ~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~ 341 (592)
T 3ogk_B 263 YMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYC 341 (592)
T ss_dssp SSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHC
T ss_pred HHHhhccccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhC
Confidence 1223344555666666666666543332 224556666666666 33322 222233456
Q ss_pred ccccccccc-----------cccccccCC-ccccCCCCCCEEEccCccccccCCccccC-CCCCCEEEeC----CCCCCC
Q 005864 136 YQLHKLDFS-----------LNQIVGEIP-IELGNLKSLNYLVLNGNKLSGNLPRVLGS-LSELEYLDLS----TNKLSG 198 (673)
Q Consensus 136 ~~L~~L~l~-----------~n~i~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~l~~-l~~L~~L~l~----~n~l~~ 198 (673)
++|++|+++ .|.+++... .....+++|++|+++.|.+++..+..+.. +++|+.|+++ .|.+++
T Consensus 342 ~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~ 421 (592)
T 3ogk_B 342 KQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITD 421 (592)
T ss_dssp TTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSS
T ss_pred CCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccC
Confidence 667777776 244443211 11234667777777767776554444543 6777777774 556664
Q ss_pred c-----CCccccccccccEEEccCCc--CccCCchhhhc-ccCCCeEeecCCcCCCC-CcccccCCCcccEEEecCcccc
Q 005864 199 S-----IPETLGNLLKVHYLNLSNNQ--FRKEFPVELEK-LVQLSELDLSHNFLGGE-IPPQICNLESLEKLNVSHNNLS 269 (673)
Q Consensus 199 ~-----~~~~l~~l~~L~~L~l~~n~--l~~~~~~~~~~-l~~L~~L~ls~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~ 269 (673)
. ++..+..+++|+.|++++|. +++..+..+.. +++|+.|++++|.+++. ++..+..+++|++|+|++|.++
T Consensus 422 ~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~ 501 (592)
T 3ogk_B 422 LPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFS 501 (592)
T ss_dssp CCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCB
T ss_pred chHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCc
Confidence 2 22335567777777776433 55544444443 67788888888877652 3344566788888888888876
Q ss_pred cc-CccccccCCCccEEEccCccccCC
Q 005864 270 GL-IPSCFEGMHGLSCIDISYNELLGL 295 (673)
Q Consensus 270 ~~-~~~~~~~~~~L~~l~l~~N~l~~~ 295 (673)
+. .+..+..+++|++|++++|+++..
T Consensus 502 ~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 502 ERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 44 233445678888888888886654
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.5e-21 Score=181.42 Aligned_cols=131 Identities=27% Similarity=0.255 Sum_probs=49.6
Q ss_pred CCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccc
Q 005864 65 SLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFS 144 (673)
Q Consensus 65 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~ 144 (673)
+|++|+|++|+++++.+..|..+++|++|+|++|+++.+.+..|..+++|++|+|++|+++...+..|..+++|++|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 33344444443333333333334444444444444333333333333333444444333333222233333333333333
Q ss_pred cccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCC
Q 005864 145 LNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNK 195 (673)
Q Consensus 145 ~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 195 (673)
+|++++..+..+..+++|++|++++|++++..+..+..+++|+.|++++|.
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 159 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 159 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCC
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCC
Confidence 333332222223333444444444444443333333334444444444443
|
| >2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.85 E-value=7.4e-21 Score=181.00 Aligned_cols=178 Identities=21% Similarity=0.187 Sum_probs=98.3
Q ss_pred cEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccc
Q 005864 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLN 146 (673)
Q Consensus 67 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n 146 (673)
+.++++++.++.++... .++|++|+|++|.++++.+..|..+++|++|++++|+++...+..|..+++|++|++++|
T Consensus 10 ~~v~c~~~~l~~~p~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTSVPTGI---PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSSCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccCCCCCC---CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 45666666666554322 346777777777776666666666667777777766666554445555666666666666
Q ss_pred cccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCch
Q 005864 147 QIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPV 226 (673)
Q Consensus 147 ~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~ 226 (673)
++++..+..+..+++|++|++++|++++..+..|..+++|+.|++++|.+++..+..+..+++|+.|++++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 6554444445555555555555555554444445555555555555555554444444555555555555554432
Q ss_pred hhhcccCCCeEeecCCcCCCCCcccccC
Q 005864 227 ELEKLVQLSELDLSHNFLGGEIPPQICN 254 (673)
Q Consensus 227 ~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 254 (673)
.+++|+.|+++.|.+++.+|..++.
T Consensus 163 ---~~~~l~~L~~~~n~~~g~ip~~~~~ 187 (208)
T 2o6s_A 163 ---TCPGIRYLSEWINKHSGVVRNSAGS 187 (208)
T ss_dssp ---CTTTTHHHHHHHHHCTTTBBCTTSS
T ss_pred ---CCCCHHHHHHHHHhCCceeeccCcc
Confidence 1224444444445444444444443
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.7e-21 Score=207.31 Aligned_cols=188 Identities=23% Similarity=0.330 Sum_probs=118.4
Q ss_pred CCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccc
Q 005864 65 SLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFS 144 (673)
Q Consensus 65 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~ 144 (673)
+|+.|+|++|+|++++... +++|++|+|++|.|+.++ ..+++|+.|+|++|.|++ +|. +.+ +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l---~~~L~~L~Ls~N~l~~ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNL---PPQITVLEITQNALISLP----ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSCCCSCC---CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCccCHhH---cCCCCEEECcCCCCcccc----cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 5666666666666544333 255666666666665332 334666666666666664 444 433 66666666
Q ss_pred cccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCC
Q 005864 145 LNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEF 224 (673)
Q Consensus 145 ~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~ 224 (673)
+|.+++ +|. .+++|+.|+|++|.+++ +|. .+++|+.|+|++|.+++ +|. |. ++|+.|+|++|+|+. +
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~-l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLES-L 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSS-C
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCc-h
Confidence 666664 443 45677777777777764 343 45677777777777764 555 44 677777777777773 3
Q ss_pred chhhhcccCC-------CeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCC
Q 005864 225 PVELEKLVQL-------SELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMH 280 (673)
Q Consensus 225 ~~~~~~l~~L-------~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 280 (673)
|. +.. +| +.|+|++|.|+ .+|..+..+++|+.|+|++|++++..|..+..+.
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 33 443 55 78888888887 5677777788888888888888877777666543
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.5e-21 Score=183.22 Aligned_cols=157 Identities=20% Similarity=0.231 Sum_probs=126.3
Q ss_pred cccccccccccccCCccccCCCCCCEEEccCccccccCC-ccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccC
Q 005864 139 HKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLP-RVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSN 217 (673)
Q Consensus 139 ~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~ 217 (673)
+.+++++|.++ .+|..+. +.++.|+|++|++++..+ ..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 35666666665 3454443 456788888888886644 4577888888888888888877777888888888888888
Q ss_pred CcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCC
Q 005864 218 NQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIP 297 (673)
Q Consensus 218 n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~ 297 (673)
|++++..+..|..+++|+.|+|++|.+++..|..|..+++|+.|+|++|++++..|..|..+++|+.|++++|++.+..+
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 88888778788888889999999999887778888889999999999999998888889999999999999999988766
Q ss_pred C
Q 005864 298 N 298 (673)
Q Consensus 298 ~ 298 (673)
-
T Consensus 171 l 171 (220)
T 2v70_A 171 L 171 (220)
T ss_dssp G
T ss_pred h
Confidence 4
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.84 E-value=7.2e-21 Score=182.41 Aligned_cols=156 Identities=21% Similarity=0.270 Sum_probs=118.9
Q ss_pred cccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCC
Q 005864 139 HKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNN 218 (673)
Q Consensus 139 ~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n 218 (673)
+.++++++.++ .+|..+. ++|+.|++++|++++..+..|..+++|+.|+|++|.+++..|..|..+++|+.|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 34555666555 4444443 57777777777777666667777778888888888877666777778888888888888
Q ss_pred cCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCC
Q 005864 219 QFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIP 297 (673)
Q Consensus 219 ~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~ 297 (673)
+|+...+..|..+++|+.|+|++|.+++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|++.+...
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 8887666667778888888888888887777788888888888888888888877778888888888888888877554
|
| >3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-22 Score=225.08 Aligned_cols=178 Identities=18% Similarity=0.092 Sum_probs=112.2
Q ss_pred ccCCCCCCEEEeeCCccccCCC----ccccCCCCCCEEEcccCccc----cccCccccCCCCCcEEEccCcccccccccc
Q 005864 12 VGNFTNLKGLYLYSNSLSGSVP----GEIGNLMQLTNLEIDNNQLF----GQIPRSLRNLASLNRVHLEQNHLTGNISEV 83 (673)
Q Consensus 12 ~~~l~~L~~L~L~~n~i~~~~~----~~~~~l~~L~~L~L~~n~i~----~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~ 83 (673)
..++++|++|+|++|.+++... ..+..+++|++|++++|.++ ...+..+.++++|++|+|++|.+.++ +..
T Consensus 160 ~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l-~~~ 238 (592)
T 3ogk_B 160 VTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILEL-VGF 238 (592)
T ss_dssp HHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGG-HHH
T ss_pred HhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHH-HHH
Confidence 3578999999999999886633 34567899999999999997 33445567899999999999999874 477
Q ss_pred cCCCCCccEEEccCCccc---cccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCC-ccccCC
Q 005864 84 FGIYPNLTFLDISHNNFY---GEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIP-IELGNL 159 (673)
Q Consensus 84 ~~~l~~L~~L~L~~n~i~---~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~-~~l~~l 159 (673)
+..+++|++|+++.+... ......+..+++|+.|+++++... .++..+..+++|++|++++|.+++... ..+..+
T Consensus 239 ~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~ 317 (592)
T 3ogk_B 239 FKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKC 317 (592)
T ss_dssp HHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTC
T ss_pred HhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhC
Confidence 888899999999853222 122234455556666666554332 344455556666666666665443222 223445
Q ss_pred CCCCEEEccCccccc-cCCccccCCCCCCEEEeC
Q 005864 160 KSLNYLVLNGNKLSG-NLPRVLGSLSELEYLDLS 192 (673)
Q Consensus 160 ~~L~~L~L~~n~l~~-~~~~~l~~l~~L~~L~l~ 192 (673)
++|+.|+++ +.+.+ .++..+..+++|++|+++
T Consensus 318 ~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~ 350 (592)
T 3ogk_B 318 PNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIE 350 (592)
T ss_dssp TTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEE
T ss_pred cCCCEEecc-CccCHHHHHHHHHhCCCCCEEEee
Confidence 555555555 22221 122222334455555555
|
| >3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.7e-20 Score=201.99 Aligned_cols=189 Identities=24% Similarity=0.315 Sum_probs=134.8
Q ss_pred CCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcc
Q 005864 41 QLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFS 120 (673)
Q Consensus 41 ~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 120 (673)
+|+.|+|++|++++ +|..+ +++|++|+|++|+|+.++ ..+++|++|+|++|+|++++. +.+ +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~~ip----~~l~~L~~L~Ls~N~l~~ip~--l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALISLP----ELPASLEYLDACDNRLSTLPE--LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCSCCCC--CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCcccc----cccCCCCEEEccCCCCCCcch--hhc--CCCEEECC
Confidence 67777777777764 45444 266777777777777544 346777777777777776333 443 77778888
Q ss_pred cCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcC
Q 005864 121 MNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSI 200 (673)
Q Consensus 121 ~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~ 200 (673)
+|.+++ +|. .+++|+.|++++|.+++ +|. .+++|+.|+|++|++++ +|. |. ++|+.|+|++|.|+ .+
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~l 195 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SL 195 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SC
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-ch
Confidence 777775 444 56778888888888774 454 46788888888888885 555 55 78888888888887 55
Q ss_pred Cccccccccc-------cEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCc
Q 005864 201 PETLGNLLKV-------HYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLES 257 (673)
Q Consensus 201 ~~~l~~l~~L-------~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~ 257 (673)
|. +.. +| +.|+|++|+|+. +|..+..+++|+.|+|++|++++.+|..+..+..
T Consensus 196 p~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 196 PA-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CC-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred hh-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 65 544 66 888999998884 6777777888999999999988888877776543
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-20 Score=188.84 Aligned_cols=172 Identities=25% Similarity=0.333 Sum_probs=84.2
Q ss_pred ccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCc
Q 005864 36 IGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLG 115 (673)
Q Consensus 36 ~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 115 (673)
+..+++|+.|++++|.+... + .+..+++|++|+|++|+++++.+ +..+++|++|+|++|.+++. ..+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCC
Confidence 34555666666666666532 2 35556666666666666665443 55666666666666665542 2255555555
Q ss_pred EEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCC
Q 005864 116 TLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNK 195 (673)
Q Consensus 116 ~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 195 (673)
+|++++|++++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..+ +..+++|+.|++++|.
T Consensus 116 ~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 116 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCc
Confidence 555555555532 3344444444444444444422 234444444444444444443222 4444444444444444
Q ss_pred CCCcCCccccccccccEEEccCCcCc
Q 005864 196 LSGSIPETLGNLLKVHYLNLSNNQFR 221 (673)
Q Consensus 196 l~~~~~~~l~~l~~L~~L~l~~n~l~ 221 (673)
+++ ++ .+..+++|+.|++++|+++
T Consensus 190 i~~-l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 190 ISD-LR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp CCB-CG-GGTTCTTCSEEEEEEEEEE
T ss_pred CCC-Ch-hhccCCCCCEEECcCCccc
Confidence 432 11 2333444444444444433
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.5e-20 Score=204.71 Aligned_cols=190 Identities=24% Similarity=0.303 Sum_probs=111.5
Q ss_pred CCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccC
Q 005864 18 LKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISH 97 (673)
Q Consensus 18 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 97 (673)
+..+.++.+.+++..+ +..+++|+.|++++|.|... + .+..+++|+.|+|++|+|.++++ +..+++|+.|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 3344445555543322 44555666666666665532 2 35566666666666666665443 55666666666666
Q ss_pred CccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCC
Q 005864 98 NNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLP 177 (673)
Q Consensus 98 n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 177 (673)
|.+++. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++..|
T Consensus 97 N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 97 NKIKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SCCCCC--TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCCC--hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 666542 2455666666666666666642 3456666666666666666543 456666666666666666665443
Q ss_pred ccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccC
Q 005864 178 RVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKE 223 (673)
Q Consensus 178 ~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~ 223 (673)
+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|++.+.
T Consensus 171 --l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 171 --LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp --GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred --hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 66666666666666666642 2466666666777776666653
|
| >1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A | Back alignment and structure |
|---|
Probab=99.83 E-value=2.1e-20 Score=187.49 Aligned_cols=174 Identities=24% Similarity=0.327 Sum_probs=155.1
Q ss_pred cccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCc
Q 005864 11 SVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNL 90 (673)
Q Consensus 11 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L 90 (673)
.++.+++|++|++++|.+++. + .+..+++|++|+|++|++++..+ +..+++|+.|+|++|+++++. .+..+++|
T Consensus 41 ~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~--~l~~l~~L 114 (291)
T 1h6t_A 41 TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDLS--SLKDLKKL 114 (291)
T ss_dssp CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCGG--GGTTCTTC
T ss_pred chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCCh--hhccCCCC
Confidence 456789999999999999954 3 48999999999999999986544 999999999999999999754 48999999
Q ss_pred cEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCc
Q 005864 91 TFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGN 170 (673)
Q Consensus 91 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n 170 (673)
++|+|++|.+++. ..+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..+ +..+++|+.|++++|
T Consensus 115 ~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N 188 (291)
T 1h6t_A 115 KSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKN 188 (291)
T ss_dssp CEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCC
Confidence 9999999999865 5788999999999999999965 689999999999999999986544 889999999999999
Q ss_pred cccccCCccccCCCCCCEEEeCCCCCCC
Q 005864 171 KLSGNLPRVLGSLSELEYLDLSTNKLSG 198 (673)
Q Consensus 171 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~ 198 (673)
.+++. + .+..+++|+.|++++|.++.
T Consensus 189 ~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 189 HISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred cCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 99954 3 48999999999999999984
|
| >1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A | Back alignment and structure |
|---|
Probab=99.82 E-value=2.4e-20 Score=204.77 Aligned_cols=171 Identities=26% Similarity=0.300 Sum_probs=77.8
Q ss_pred cCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccc
Q 005864 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHK 140 (673)
Q Consensus 61 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 140 (673)
..+++|+.|+|++|.|..+. .|..+++|+.|+|++|.+++..+ +..+++|+.|+|++|.+++. ..+..+++|+.
T Consensus 40 ~~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~ 113 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL--SSLKDLKKLKS 113 (605)
T ss_dssp HHHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC--TTSTTCTTCCE
T ss_pred hcCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC--hhhccCCCCCE
Confidence 34444444445444444332 24444445555555444443332 44444455555555444421 13444444555
Q ss_pred cccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcC
Q 005864 141 LDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQF 220 (673)
Q Consensus 141 L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 220 (673)
|+|++|.+.+. ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+.+..| +..+++|+.|+|++|+|
T Consensus 114 L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i 187 (605)
T 1m9s_A 114 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 187 (605)
T ss_dssp EECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCC
Confidence 55555444421 2344444455555555444432 334444445555555444443322 44444455555555544
Q ss_pred ccCCchhhhcccCCCeEeecCCcCC
Q 005864 221 RKEFPVELEKLVQLSELDLSHNFLG 245 (673)
Q Consensus 221 ~~~~~~~~~~l~~L~~L~ls~N~l~ 245 (673)
++. ..+..+++|+.|+|++|++.
T Consensus 188 ~~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 188 SDL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp CBC--GGGTTCTTCSEEECCSEEEE
T ss_pred CCC--hHHccCCCCCEEEccCCcCc
Confidence 432 23444444455555544444
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.82 E-value=4.7e-20 Score=191.13 Aligned_cols=179 Identities=24% Similarity=0.204 Sum_probs=123.8
Q ss_pred cEEEcccCccCccCChhhhccccccccccccccccccCCcccc-CCCCCCEEEccCccccccCCccccCCCCCCEEEeCC
Q 005864 115 GTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELG-NLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLST 193 (673)
Q Consensus 115 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~-~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~ 193 (673)
+.+++++++++. +|..+. +.++.|+|++|++++..+..+. .+++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 456666666663 443332 2466677777777665555565 677777777777777766666677777777777777
Q ss_pred CCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccc---cCCCcccEEEecCccccc
Q 005864 194 NKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQI---CNLESLEKLNVSHNNLSG 270 (673)
Q Consensus 194 n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~---~~l~~L~~L~l~~N~l~~ 270 (673)
|.+++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.|++..+..| ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 77776656667777777777777777777777777777777777777777775444444 457788888888888887
Q ss_pred cCccccccCCCc--cEEEccCccccCCC
Q 005864 271 LIPSCFEGMHGL--SCIDISYNELLGLI 296 (673)
Q Consensus 271 ~~~~~~~~~~~L--~~l~l~~N~l~~~~ 296 (673)
+.+..+..++.+ +.|+|++|++.+..
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred cCHHHhhhccHhhcceEEecCCCccCCc
Confidence 766777777763 77888888887654
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.81 E-value=9.1e-21 Score=194.02 Aligned_cols=271 Identities=11% Similarity=0.063 Sum_probs=170.8
Q ss_pred ccCCCcccC--CCCCCEEEeeCCccccCCCccccC-CCCCCEEEcccCccc--cccCccccCCCCCcEEEccCccccccc
Q 005864 6 GAIPPSVGN--FTNLKGLYLYSNSLSGSVPGEIGN-LMQLTNLEIDNNQLF--GQIPRSLRNLASLNRVHLEQNHLTGNI 80 (673)
Q Consensus 6 ~~~p~~~~~--l~~L~~L~L~~n~i~~~~~~~~~~-l~~L~~L~L~~n~i~--~~~~~~l~~l~~L~~L~L~~n~i~~~~ 80 (673)
|+++..+.. +.+|+.|.++++- .......+.. +++|+.|||++|+|. ......+ +.+..+.+..| .++
T Consensus 13 g~l~~~l~~~~~~~l~~L~l~g~i-~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~---~I~ 85 (329)
T 3sb4_A 13 GTLISMMTEEEANSITHLTLTGKL-NAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMAN---FVP 85 (329)
T ss_dssp TCGGGGSCHHHHHHCSEEEEEEEE-CHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTT---EEC
T ss_pred CcHHhhccchhhCceeEEEEeccc-cHHHHHHHHHhhccCeEEecCcceeEEecCccccc---ccccccccccc---ccC
Confidence 334444433 6678899988752 2122233444 788999999999887 2221111 22333444444 233
Q ss_pred ccccCC--------CCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccc----
Q 005864 81 SEVFGI--------YPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQI---- 148 (673)
Q Consensus 81 ~~~~~~--------l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i---- 148 (673)
..+|.+ +++|+.|+|.+ .++.+...+|.+|++|+.|++.+|.+..+.+.+|.++.++..+.+..+..
T Consensus 86 ~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~ 164 (329)
T 3sb4_A 86 AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFK 164 (329)
T ss_dssp TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTS
T ss_pred HHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcc
Confidence 455555 66666666666 55556666666666666666666666555555665555555554444221
Q ss_pred cccCCccccCCC--------------------------CCCEEEccCccccccCCccc-cCCCCCCEEEeCCCCCCCcCC
Q 005864 149 VGEIPIELGNLK--------------------------SLNYLVLNGNKLSGNLPRVL-GSLSELEYLDLSTNKLSGSIP 201 (673)
Q Consensus 149 ~~~~~~~l~~l~--------------------------~L~~L~L~~n~l~~~~~~~l-~~l~~L~~L~l~~n~l~~~~~ 201 (673)
.......|..+. ++..+.+.++-.. .....+ ..+++|+.|+|++|.++...+
T Consensus 165 ~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~ 243 (329)
T 3sb4_A 165 NRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPD 243 (329)
T ss_dssp TTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECT
T ss_pred ccccccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecH
Confidence 111222233333 3444444433211 111111 236889999999888886667
Q ss_pred ccccccccccEEEccCCcCccCCchhhhcccCCC-eEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCC
Q 005864 202 ETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLS-ELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMH 280 (673)
Q Consensus 202 ~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~-~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 280 (673)
.+|.++++|+.|++.+| ++.+.+..|.++.+|+ .|++.+ .++.+.+.+|.++++|+.+++++|+++.+.+.+|.+++
T Consensus 244 ~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~ 321 (329)
T 3sb4_A 244 FTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGV 321 (329)
T ss_dssp TTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTC
T ss_pred hhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCc
Confidence 78888889999999887 7777788888888898 999988 67756678888899999999989999888888899999
Q ss_pred CccEEEc
Q 005864 281 GLSCIDI 287 (673)
Q Consensus 281 ~L~~l~l 287 (673)
+|+.++.
T Consensus 322 ~L~~ly~ 328 (329)
T 3sb4_A 322 PSKLIYK 328 (329)
T ss_dssp CCCEEEC
T ss_pred chhhhcc
Confidence 8888763
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.6e-21 Score=217.10 Aligned_cols=227 Identities=13% Similarity=0.115 Sum_probs=112.3
Q ss_pred cCCCCCCEEEeeCCccccCCCcccc-CCCCCCEEEcccC-ccccc-cCccccCCCCCcEEEccCccccccccccc----C
Q 005864 13 GNFTNLKGLYLYSNSLSGSVPGEIG-NLMQLTNLEIDNN-QLFGQ-IPRSLRNLASLNRVHLEQNHLTGNISEVF----G 85 (673)
Q Consensus 13 ~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~n-~i~~~-~~~~l~~l~~L~~L~L~~n~i~~~~~~~~----~ 85 (673)
..+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. .+..+.++++|++|+|++|.+++.....+ .
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~ 181 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCT
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhh
Confidence 3456666666666666655444454 4666666666666 44322 22333356666666666666554333222 2
Q ss_pred CCCCccEEEccCCc--ccccc-ccCccccCCCcEEEcccC----------------------------------------
Q 005864 86 IYPNLTFLDISHNN--FYGEI-WSSWGKCQQLGTLNFSMN---------------------------------------- 122 (673)
Q Consensus 86 ~l~~L~~L~L~~n~--i~~~~-~~~~~~l~~L~~L~L~~n---------------------------------------- 122 (673)
.+++|++|+|++|. +.... ...+..+++|++|++++|
T Consensus 182 ~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l 261 (594)
T 2p1m_B 182 TYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVAL 261 (594)
T ss_dssp TCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHH
T ss_pred cCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHH
Confidence 44566666666554 21110 011123355555555544
Q ss_pred ----------ccCc----cCChhhhccccccccccccccccccC-CccccCCCCCCEEEccCcccccc-CCccccCCCCC
Q 005864 123 ----------NITG----SIPPEIGKLYQLHKLDFSLNQIVGEI-PIELGNLKSLNYLVLNGNKLSGN-LPRVLGSLSEL 186 (673)
Q Consensus 123 ----------~l~~----~~~~~l~~l~~L~~L~l~~n~i~~~~-~~~l~~l~~L~~L~L~~n~l~~~-~~~~l~~l~~L 186 (673)
.+.. .++..+..+++|++|++++|.+++.. ...+..+++|++|++++| +++. ++.....+++|
T Consensus 262 ~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L 340 (594)
T 2p1m_B 262 SGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDL 340 (594)
T ss_dssp HTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTC
T ss_pred hcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCC
Confidence 1111 12222335678888888888765432 222456677777777776 4322 11122345666
Q ss_pred CEEEeC---------CCCCCCcCCcccc-ccccccEEEccCCcCccCCchhhh-cccCCCeEeec
Q 005864 187 EYLDLS---------TNKLSGSIPETLG-NLLKVHYLNLSNNQFRKEFPVELE-KLVQLSELDLS 240 (673)
Q Consensus 187 ~~L~l~---------~n~l~~~~~~~l~-~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~ls 240 (673)
+.|++. .+.+++.....+. .+++|+.|.++.|.+++..+..+. .+++|+.|+++
T Consensus 341 ~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~ 405 (594)
T 2p1m_B 341 RELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLC 405 (594)
T ss_dssp CEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred CEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEee
Confidence 666662 2333322112222 245555555555555543333333 34555555555
|
| >2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.2e-19 Score=171.95 Aligned_cols=151 Identities=23% Similarity=0.272 Sum_probs=85.1
Q ss_pred EEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCc
Q 005864 44 NLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNN 123 (673)
Q Consensus 44 ~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 123 (673)
.+++++++++ .+|..+. ++|+.|+|++|+|+.+.+..|..+++|++|+|++|.++++.+..|.++++|++|+|++|.
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4444444444 2333222 345555555555555444455555555555555555555555555555555555555555
Q ss_pred cCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCC
Q 005864 124 ITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLS 197 (673)
Q Consensus 124 l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 197 (673)
|+.+.+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 55444444555566666666666665555556666666666666666666555556666667777777777664
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.80 E-value=3e-19 Score=172.29 Aligned_cols=156 Identities=24% Similarity=0.287 Sum_probs=118.6
Q ss_pred ccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccC
Q 005864 138 LHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSN 217 (673)
Q Consensus 138 L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~ 217 (673)
-+.++++++.++ .+|..+. ++|++|+|++|.+++..+..|..+++|+.|+|++|.++...+..|..+++|+.|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 345666666665 4454443 6777788888887777677777778888888888887755556677788888888888
Q ss_pred CcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCC
Q 005864 218 NQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIP 297 (673)
Q Consensus 218 n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~ 297 (673)
|++++..+..|..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|++++|++.+.++
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 8888776777778888888888888887 677778888888888888888887777778888888888888888887665
|
| >2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.9e-19 Score=186.54 Aligned_cols=176 Identities=26% Similarity=0.259 Sum_probs=82.5
Q ss_pred CEEEcccCccccccCccccCCCCCcEEEccCcccccccccccC-CCCCccEEEccCCccccccccCccccCCCcEEEccc
Q 005864 43 TNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFG-IYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121 (673)
Q Consensus 43 ~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 121 (673)
+.+++++++++ .+|..+. +.++.|+|++|+|+++.+..|. .+++|++|+|++|+|+.+.+..|.++++|+.|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 45555555555 3343322 2355555555555555544444 455555555555555544444444444444444444
Q ss_pred CccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCC
Q 005864 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIP 201 (673)
Q Consensus 122 n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~ 201 (673)
|+|+... +..|..+++|+.|+|++|+++...+..|..+++|+.|+|++|.+++..+
T Consensus 98 N~l~~~~------------------------~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~ 153 (361)
T 2xot_A 98 NHLHTLD------------------------EFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPV 153 (361)
T ss_dssp SCCCEEC------------------------TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCG
T ss_pred CcCCcCC------------------------HHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCH
Confidence 4444333 3334444444444444444444444444444555555555555443222
Q ss_pred ccc---cccccccEEEccCCcCccCCchhhhcccC--CCeEeecCCcCC
Q 005864 202 ETL---GNLLKVHYLNLSNNQFRKEFPVELEKLVQ--LSELDLSHNFLG 245 (673)
Q Consensus 202 ~~l---~~l~~L~~L~l~~n~l~~~~~~~~~~l~~--L~~L~ls~N~l~ 245 (673)
..| ..+++|+.|+|++|+|++..+..+..++. |+.|+|++|++.
T Consensus 154 ~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 154 ELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp GGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred HHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 222 33445555555555555444444444443 244555555443
|
| >2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.6e-21 Score=214.27 Aligned_cols=290 Identities=18% Similarity=0.155 Sum_probs=178.0
Q ss_pred CCccccCCCccc-CCCCCCEEEeeCC-ccccC-CCccccCCCCCCEEEcccCccccccCcccc----CCCCCcEEEccCc
Q 005864 2 NHLSGAIPPSVG-NFTNLKGLYLYSN-SLSGS-VPGEIGNLMQLTNLEIDNNQLFGQIPRSLR----NLASLNRVHLEQN 74 (673)
Q Consensus 2 n~i~~~~p~~~~-~l~~L~~L~L~~n-~i~~~-~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~----~l~~L~~L~L~~n 74 (673)
|.+++..+..+. .+++|++|+|++| .++.. .+..+.++++|++|+|++|.+++..+..+. .+++|++|++++|
T Consensus 115 ~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~ 194 (594)
T 2p1m_B 115 MVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCL 194 (594)
T ss_dssp CBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTC
T ss_pred cEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEeccc
Confidence 345555555554 5778888888877 55532 233344677888888888877654443333 5567777777777
Q ss_pred c--ccc-ccccccCCCCCccEEEccCCc--------------------------------------------------cc
Q 005864 75 H--LTG-NISEVFGIYPNLTFLDISHNN--------------------------------------------------FY 101 (673)
Q Consensus 75 ~--i~~-~~~~~~~~l~~L~~L~L~~n~--------------------------------------------------i~ 101 (673)
. ++. .....+..+++|++|+|++|. +.
T Consensus 195 ~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~ 274 (594)
T 2p1m_B 195 ASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFW 274 (594)
T ss_dssp CSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCB
T ss_pred CCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCc
Confidence 5 221 111222345677777776651 10
Q ss_pred cc----cccCccccCCCcEEEcccCccCccCC-hhhhccccccccccccccccccC-CccccCCCCCCEEEcc-------
Q 005864 102 GE----IWSSWGKCQQLGTLNFSMNNITGSIP-PEIGKLYQLHKLDFSLNQIVGEI-PIELGNLKSLNYLVLN------- 168 (673)
Q Consensus 102 ~~----~~~~~~~l~~L~~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~n~i~~~~-~~~l~~l~~L~~L~L~------- 168 (673)
.. .+..+..+++|++|+|++|.++.... ..+..+++|++|++++| +.... +.....+++|++|++.
T Consensus 275 ~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~ 353 (594)
T 2p1m_B 275 DAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVM 353 (594)
T ss_dssp TCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCS
T ss_pred ccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCccccc
Confidence 01 11112256899999999999774322 23557889999999988 44222 2222347888888883
Q ss_pred --CccccccCCcccc-CCCCCCEEEeCCCCCCCcCCcccc-ccccccEEEcc--C----CcCccCC-----chhhhcccC
Q 005864 169 --GNKLSGNLPRVLG-SLSELEYLDLSTNKLSGSIPETLG-NLLKVHYLNLS--N----NQFRKEF-----PVELEKLVQ 233 (673)
Q Consensus 169 --~n~l~~~~~~~l~-~l~~L~~L~l~~n~l~~~~~~~l~-~l~~L~~L~l~--~----n~l~~~~-----~~~~~~l~~ 233 (673)
.+.+++.....+. .+++|+.|.++.|.+++..+..+. .+++|+.|+++ + |.++... +..+..+++
T Consensus 354 ~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~ 433 (594)
T 2p1m_B 354 EPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKD 433 (594)
T ss_dssp SCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTT
T ss_pred ccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCC
Confidence 3455533222232 467888888877777755444454 47788888887 3 4555321 122566677
Q ss_pred CCeEeecCCcCCCCCcccccC-CCcccEEEecCccccccCcccc-ccCCCccEEEccCcccc
Q 005864 234 LSELDLSHNFLGGEIPPQICN-LESLEKLNVSHNNLSGLIPSCF-EGMHGLSCIDISYNELL 293 (673)
Q Consensus 234 L~~L~ls~N~l~~~~~~~~~~-l~~L~~L~l~~N~l~~~~~~~~-~~~~~L~~l~l~~N~l~ 293 (673)
|+.|++++ .+++..+..+.. +++|+.|+|++|.+++.....+ ..+++|+.|++++|+++
T Consensus 434 L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 434 LRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp CCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred ccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 88888866 555544445554 6778888888887765544444 56777888888888774
|
| >2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.4e-19 Score=169.93 Aligned_cols=152 Identities=19% Similarity=0.236 Sum_probs=91.4
Q ss_pred EEEcccCccccccCccccCCCCCcEEEccCccccccc-ccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccC
Q 005864 44 NLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNI-SEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMN 122 (673)
Q Consensus 44 ~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~-~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 122 (673)
.+++++|.++ .+|..+. ..+++|+|++|+|+++. ...|..+++|++|+|++|.|+++.+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 4555555554 2333222 23445555555555442 234555555555555555555555555566666666666666
Q ss_pred ccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCC
Q 005864 123 NITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSG 198 (673)
Q Consensus 123 ~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~ 198 (673)
.+++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..|..+++|+.|++++|.+..
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 6665555556666666666666666666666666677777777777777776666677777777777777777764
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.1e-19 Score=176.67 Aligned_cols=142 Identities=18% Similarity=0.222 Sum_probs=109.4
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCE--EEEEeeccchhh---------------------hhHHHHHHHHHHHHHh
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEV--VAVKKFHSLLLS---------------------EISVQREFLNEIKALT 456 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~--vavK~~~~~~~~---------------------~~~~~~~~~~e~~~l~ 456 (673)
..-|++.+.||+|+||.||+|.. .+|+. ||||+++..... .......+.+|+..+.
T Consensus 46 ~~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 125 (258)
T 1zth_A 46 GYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLE 125 (258)
T ss_dssp TSEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHH
T ss_pred CCchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHH
Confidence 33467889999999999999987 68999 999987543211 0112246889999999
Q ss_pred ccCCCcc--cceeeeeecCCeeeEEEecccC-C----ChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHh-hcCCCCe
Q 005864 457 EIRHRNI--VKFYGFCSHPRHSFLVYECLER-G----SLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH-HDCFPPI 528 (673)
Q Consensus 457 ~l~h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH-~~~~~~i 528 (673)
+++|+++ ..++++ +..++||||+.+ | +|.++... .++..+..++.|++.|+.||| +. +|
T Consensus 126 ~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~~---gi 192 (258)
T 1zth_A 126 RAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQEA---EL 192 (258)
T ss_dssp HHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHTS---CE
T ss_pred HHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHHC---CE
Confidence 9988864 334432 356899999953 4 66665432 234567789999999999999 88 99
Q ss_pred EEecCCCCCeEeCCCCceEEecccceeec
Q 005864 529 VHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 529 vH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||||+|||+++ .++|+|||+|...
T Consensus 193 vHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 193 VHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp ECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred EeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 99999999999998 9999999999865
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.8e-20 Score=183.44 Aligned_cols=169 Identities=21% Similarity=0.262 Sum_probs=107.5
Q ss_pred CCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEE
Q 005864 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFL 93 (673)
Q Consensus 14 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 93 (673)
++.++..+++++|.+++.. .+..+++|++|++++|+++. ++ .+..+++|+.|+|++|+|+++.+ +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4566777777788777433 56777888888888887773 34 57777888888888888776655 7777778888
Q ss_pred EccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCcccc
Q 005864 94 DISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLS 173 (673)
Q Consensus 94 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~ 173 (673)
+|++|++++... +.. ++|+.|++++|++++. ..+..+++|+.|++++|++++. + .+..+++|+.|++++|+++
T Consensus 91 ~L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKNLNG--IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSCCTT--CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCCcCc--ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 887777765432 222 6677777777766643 2455566666666666665532 2 4555555555555555555
Q ss_pred ccCCccccCCCCCCEEEeCCCCCC
Q 005864 174 GNLPRVLGSLSELEYLDLSTNKLS 197 (673)
Q Consensus 174 ~~~~~~l~~l~~L~~L~l~~n~l~ 197 (673)
+. ..+..+++|+.|++++|.++
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEE
T ss_pred ch--HHhccCCCCCEEeCCCCccc
Confidence 33 34555555555555555554
|
| >3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-18 Score=168.09 Aligned_cols=134 Identities=23% Similarity=0.230 Sum_probs=75.1
Q ss_pred CCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhcccccccccc
Q 005864 64 ASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDF 143 (673)
Q Consensus 64 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l 143 (673)
++|++|+|++|+|+++.+..|..+++|++|+|++|+++.+.+..|..+++|+.|+|++|+|+...+..|..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 44445555555544444444444555555555555554444444455555555555555555444444555555555555
Q ss_pred ccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCC
Q 005864 144 SLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSG 198 (673)
Q Consensus 144 ~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~ 198 (673)
++|+++ .+|..+..+++|+.|+|++|++++..+..|..+++|+.|++++|.+..
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 555555 445555666666666666666665555556666777777777776653
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.78 E-value=6.2e-18 Score=176.51 Aligned_cols=267 Identities=12% Similarity=0.100 Sum_probs=219.3
Q ss_pred CCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEE
Q 005864 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFL 93 (673)
Q Consensus 14 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 93 (673)
.+..++.+.+.+ .++.+...+|.++ +|+.+.+.++ ++.+...+|.++ +|+.+.|.. .+..+...+|.++++|+.+
T Consensus 111 ~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l 185 (401)
T 4fdw_A 111 ILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKA 185 (401)
T ss_dssp ECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEE
T ss_pred ecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCee
Confidence 346788888876 4555778888885 7999999877 776777888885 699999986 7888888899999999999
Q ss_pred EccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCcccc
Q 005864 94 DISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLS 173 (673)
Q Consensus 94 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~ 173 (673)
+|++|+++.+...+|. +.+|+.+.|..+ ++.+...+|.++++|+.+++..| ++.+...+|.. .+|+.+.+. +.++
T Consensus 186 ~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~ 260 (401)
T 4fdw_A 186 DLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVT 260 (401)
T ss_dssp ECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCC
T ss_pred ecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCcc
Confidence 9999999888888887 589999999854 77677888999999999999876 55566777777 789999995 4566
Q ss_pred ccCCccccCCCCCCEEEeCCCCCC-----CcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCC
Q 005864 174 GNLPRVLGSLSELEYLDLSTNKLS-----GSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEI 248 (673)
Q Consensus 174 ~~~~~~l~~l~~L~~L~l~~n~l~-----~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~ 248 (673)
.+...+|.++++|+.+.+.+|.+. ...+.+|..+++|+.+++. +.++.+....|.++.+|+.++|..| ++...
T Consensus 261 ~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~ 338 (401)
T 4fdw_A 261 NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQIN 338 (401)
T ss_dssp EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEEC
T ss_pred EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEc
Confidence 577788999999999999887764 3566789999999999999 4588788889999999999999665 66566
Q ss_pred cccccCCCcccEEEecCccccccCccccccCC-CccEEEccCcccc
Q 005864 249 PPQICNLESLEKLNVSHNNLSGLIPSCFEGMH-GLSCIDISYNELL 293 (673)
Q Consensus 249 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-~L~~l~l~~N~l~ 293 (673)
..+|.++ +|+.+++++|.+....+..|.+++ .+..|++..+.+.
T Consensus 339 ~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 339 FSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred HHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 7789998 999999999998888888888885 7889988877654
|
| >4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A | Back alignment and structure |
|---|
Probab=99.78 E-value=8e-18 Score=175.66 Aligned_cols=250 Identities=12% Similarity=0.084 Sum_probs=197.9
Q ss_pred ccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCc
Q 005864 36 IGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLG 115 (673)
Q Consensus 36 ~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 115 (673)
+..+..++.+.+.++ ++.+...+|.++ +|+.+.|..+ ++.+...+|.+. +|+.+.|.. .++.+...+|.+|.+|+
T Consensus 109 ~~~~~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~ 183 (401)
T 4fdw_A 109 TEILKGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLK 183 (401)
T ss_dssp EEECSSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCC
T ss_pred EEecCCccEEEECCc-cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCC
Confidence 344577888888764 555667788885 7999998776 777888888884 799999986 67778888899999999
Q ss_pred EEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCC
Q 005864 116 TLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNK 195 (673)
Q Consensus 116 ~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 195 (673)
.++|.+|.++.+...+|. ..+|+.+.|..+ ++.+...+|..+++|+.+++..| ++.+...+|.+ .+|+.+.+. +.
T Consensus 184 ~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~ 258 (401)
T 4fdw_A 184 KADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NG 258 (401)
T ss_dssp EEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TT
T ss_pred eeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CC
Confidence 999999988876666776 588999998855 66677888888999999999875 56566677877 789999984 44
Q ss_pred CCCcCCccccccccccEEEccCCcCc-----cCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccc
Q 005864 196 LSGSIPETLGNLLKVHYLNLSNNQFR-----KEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSG 270 (673)
Q Consensus 196 l~~~~~~~l~~l~~L~~L~l~~n~l~-----~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 270 (673)
++.....+|.++++|+.+++.+|.+. .+....|.++++|+.++|.+ .++......|.++.+|+.+.|..| ++.
T Consensus 259 i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~ 336 (401)
T 4fdw_A 259 VTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQ 336 (401)
T ss_dssp CCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCE
T ss_pred ccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccE
Confidence 55566788889999999999888765 46677888899999999984 477566678888899999999555 777
Q ss_pred cCccccccCCCccEEEccCccccCCCCC
Q 005864 271 LIPSCFEGMHGLSCIDISYNELLGLIPN 298 (673)
Q Consensus 271 ~~~~~~~~~~~L~~l~l~~N~l~~~~~~ 298 (673)
+...+|.++ +|+.+++++|.+....+.
T Consensus 337 I~~~aF~~~-~L~~l~l~~n~~~~l~~~ 363 (401)
T 4fdw_A 337 INFSAFNNT-GIKEVKVEGTTPPQVFEK 363 (401)
T ss_dssp ECTTSSSSS-CCCEEEECCSSCCBCCCS
T ss_pred EcHHhCCCC-CCCEEEEcCCCCcccccc
Confidence 778888888 899999999877655443
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=5.6e-21 Score=208.65 Aligned_cols=158 Identities=22% Similarity=0.175 Sum_probs=83.2
Q ss_pred cCccCChhhhccccccccc-cccccccccCCc-----cccC--CCCCCEEEccCccccccCCccccCCCCCCEEEeCCCC
Q 005864 124 ITGSIPPEIGKLYQLHKLD-FSLNQIVGEIPI-----ELGN--LKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNK 195 (673)
Q Consensus 124 l~~~~~~~l~~l~~L~~L~-l~~n~i~~~~~~-----~l~~--l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 195 (673)
+.+..|..++.+++|+.|+ ++.|.+...... .+.. ...|+.|+|++|.+++ +|. +..+++|+.|+|++|.
T Consensus 397 ~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 397 PLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp TGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSC
T ss_pred cccCCHHHHHHHHhcccCcchhhcccchhhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccc
Confidence 3445566677777777777 555544210000 0000 0135556666665553 333 5555556666666665
Q ss_pred CCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCC-cccccCCCcccEEEecCccccccCcc
Q 005864 196 LSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEI-PPQICNLESLEKLNVSHNNLSGLIPS 274 (673)
Q Consensus 196 l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~~~~ 274 (673)
++ .+|..+..+++|+.|+|++|+|++ +| .+..+++|+.|+|++|.|++.. |..++.+++|+.|+|++|++++.+|.
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 55 455555555556666666665554 33 5555555555566555555444 55555555555555555555554332
Q ss_pred ---ccccCCCccEEE
Q 005864 275 ---CFEGMHGLSCID 286 (673)
Q Consensus 275 ---~~~~~~~L~~l~ 286 (673)
.+..+++|+.|+
T Consensus 552 ~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 552 QERLAEMLPSVSSIL 566 (567)
T ss_dssp TTHHHHHCTTCSEEE
T ss_pred HHHHHHHCcccCccC
Confidence 122355555554
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.78 E-value=9.5e-19 Score=164.68 Aligned_cols=154 Identities=16% Similarity=0.256 Sum_probs=98.2
Q ss_pred hccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccE
Q 005864 133 GKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHY 212 (673)
Q Consensus 133 ~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 212 (673)
..+++|+.|++++|.++ .++ .+..+++|++|++++|.++. +..+..+++|++|++++|.+++..+..+..+++|+.
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 44555666666666665 333 45566666666666665542 235666667777777777776555666667777777
Q ss_pred EEccCCcCccCCchhhhcccCCCeEeecCCc-CCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCcc
Q 005864 213 LNLSNNQFRKEFPVELEKLVQLSELDLSHNF-LGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNE 291 (673)
Q Consensus 213 L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~-l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~ 291 (673)
|++++|++++..+..+..+++|+.|++++|. ++ .++ .+..+++|+.|++++|++++.. .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCcc
Confidence 7777777766666667777777777777776 54 344 5677777777777777776643 56677777777777777
Q ss_pred ccC
Q 005864 292 LLG 294 (673)
Q Consensus 292 l~~ 294 (673)
+.+
T Consensus 193 i~~ 195 (197)
T 4ezg_A 193 IGG 195 (197)
T ss_dssp ---
T ss_pred cCC
Confidence 643
|
| >1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-21 Score=213.79 Aligned_cols=204 Identities=21% Similarity=0.185 Sum_probs=129.7
Q ss_pred cCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcc-------------cccccccccCCCCCccEEE-ccCCcccc
Q 005864 37 GNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNH-------------LTGNISEVFGIYPNLTFLD-ISHNNFYG 102 (673)
Q Consensus 37 ~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~-------------i~~~~~~~~~~l~~L~~L~-L~~n~i~~ 102 (673)
..+++|+.|+|++|+++ .+|..+.+|++|+.|++++|. +.+..+..++.+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 56777888888888876 667778888888888876664 3344555566666666666 4544332
Q ss_pred ccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccC
Q 005864 103 EIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGS 182 (673)
Q Consensus 103 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~ 182 (673)
.|..+.+.+|.++... ...|+.|+|++|.+++ +|. +..+++|+.|+|++|.++ .+|..+..
T Consensus 424 ----------~L~~l~l~~n~i~~l~------~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKME------YADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHH------HTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ----------hhhhhhhhcccccccC------ccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 2333334444443211 1236667777777663 454 666677777777777777 55666777
Q ss_pred CCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCC-chhhhcccCCCeEeecCCcCCCCCcc---cccCCCcc
Q 005864 183 LSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEF-PVELEKLVQLSELDLSHNFLGGEIPP---QICNLESL 258 (673)
Q Consensus 183 l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~ls~N~l~~~~~~---~~~~l~~L 258 (673)
+++|+.|+|++|.+++ +| .+..+++|+.|+|++|+|++.. |..+..+++|+.|+|++|++++..|. .+..+++|
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L 562 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 562 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTC
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCccc
Confidence 7777777777777764 45 6677777777777777777655 67777777777777777777644332 12336677
Q ss_pred cEEEe
Q 005864 259 EKLNV 263 (673)
Q Consensus 259 ~~L~l 263 (673)
+.|++
T Consensus 563 ~~L~l 567 (567)
T 1dce_A 563 SSILT 567 (567)
T ss_dssp SEEEC
T ss_pred CccCC
Confidence 77654
|
| >1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.77 E-value=6.4e-19 Score=173.72 Aligned_cols=169 Identities=22% Similarity=0.259 Sum_probs=83.0
Q ss_pred CCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEc
Q 005864 88 PNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVL 167 (673)
Q Consensus 88 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L 167 (673)
.++..+++++|.+++.. .+..+++|+.|++++|.++. ++ .+..+++|+.|++++|++++..+ +..+++|++|+|
T Consensus 19 ~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L 92 (263)
T 1xeu_A 19 ANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEEC
T ss_pred HHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEEC
Confidence 34555555555555332 44555555555555555552 22 44555555555555555543222 445555555555
Q ss_pred cCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCC
Q 005864 168 NGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGE 247 (673)
Q Consensus 168 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~ 247 (673)
++|++++. +. +.. + +|+.|++++|++++. ..+..+++|+.|++++|++++.
T Consensus 93 ~~N~l~~l-~~-~~~-~------------------------~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~ 143 (263)
T 1xeu_A 93 NRNRLKNL-NG-IPS-A------------------------CLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI 143 (263)
T ss_dssp CSSCCSCC-TT-CCC-S------------------------SCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC
T ss_pred CCCccCCc-Cc-ccc-C------------------------cccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC
Confidence 55555432 11 111 4 445555555544432 1344455555555555555432
Q ss_pred CcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCC
Q 005864 248 IPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGL 295 (673)
Q Consensus 248 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~ 295 (673)
+ .+..+++|+.|++++|++++. ..+..+++|+.|++++|++++.
T Consensus 144 -~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 144 -V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 2 345555555555555555544 3455555555555555555544
|
| >4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.5e-18 Score=163.30 Aligned_cols=153 Identities=18% Similarity=0.222 Sum_probs=98.1
Q ss_pred cCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcE
Q 005864 37 GNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGT 116 (673)
Q Consensus 37 ~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~ 116 (673)
+.+++|+.|++++|.++ .+| .+..+++|++|++++|.+... ..+..+++|++|++++|.+++..+..++.+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNY--NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCC--GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcc--hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 45556666666666665 333 466666666666666655433 25666666666666666666555666666677777
Q ss_pred EEcccCccCccCChhhhcccccccccccccc-ccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCC
Q 005864 117 LNFSMNNITGSIPPEIGKLYQLHKLDFSLNQ-IVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNK 195 (673)
Q Consensus 117 L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~-i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~ 195 (673)
|++++|.+++..+..+..+++|++|++++|. ++ .++ .+..+++|+.|++++|++++. + .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcc
Confidence 7777777666556666677777777777776 44 333 566777777777777777743 2 56777777777777777
Q ss_pred CC
Q 005864 196 LS 197 (673)
Q Consensus 196 l~ 197 (673)
+.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 65
|
| >3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.76 E-value=9e-19 Score=179.16 Aligned_cols=239 Identities=11% Similarity=-0.043 Sum_probs=170.9
Q ss_pred CCCCCEEEeeCCccc--cCCCccccCCCCCCEEEcccCccccccCccccC--------CCCCcEEEccCccccccccccc
Q 005864 15 FTNLKGLYLYSNSLS--GSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRN--------LASLNRVHLEQNHLTGNISEVF 84 (673)
Q Consensus 15 l~~L~~L~L~~n~i~--~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~--------l~~L~~L~L~~n~i~~~~~~~~ 84 (673)
+++|++|+|++|+|. ......+ +.+..+.+..|.| .+.+|.+ +++|+.|+|.+ .++.+...+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 789999999999998 2222222 2345566666643 3456666 77777777777 7777777777
Q ss_pred CCCCCccEEEccCCccccccccCccccCCCcEEEcccCcc----CccCChhhhcccccc---------------------
Q 005864 85 GIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNI----TGSIPPEIGKLYQLH--------------------- 139 (673)
Q Consensus 85 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l----~~~~~~~l~~l~~L~--------------------- 139 (673)
.++++|+.|++++|.+..+...+|.++.++..+.+..+.. ......+|.++..|+
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~ 200 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQ 200 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCC
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccC
Confidence 7777777777777777777777777776666666555221 112223333333333
Q ss_pred -----ccccccccccccCCccc-cCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCcccccccccc-E
Q 005864 140 -----KLDFSLNQIVGEIPIEL-GNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVH-Y 212 (673)
Q Consensus 140 -----~L~l~~n~i~~~~~~~l-~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~-~ 212 (673)
.+.+.++-.. .....+ ..+++|+.|+|++|+++.+...+|.++++|+.|++++| ++...+.+|.++++|+ .
T Consensus 201 ~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~ 278 (329)
T 3sb4_A 201 PRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGT 278 (329)
T ss_dssp GGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEE
T ss_pred ccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEE
Confidence 3333332111 111111 13689999999999999777788999999999999998 7767778899999999 9
Q ss_pred EEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEe
Q 005864 213 LNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNV 263 (673)
Q Consensus 213 L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l 263 (673)
|++.+ .++.+.+..|.++++|+.|++++|.++...+..|.++++|+.++.
T Consensus 279 l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 279 LELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 99998 788788899999999999999999999777778999999998864
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.75 E-value=2e-18 Score=161.53 Aligned_cols=157 Identities=22% Similarity=0.291 Sum_probs=103.9
Q ss_pred CEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCc-cccccccccEEEccCCcCccCCchhhhcccCCCeEeecC
Q 005864 163 NYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPE-TLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241 (673)
Q Consensus 163 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~ 241 (673)
+.+++++|+++ .+|..+. ++|++|++++|.+++..+. .|..+++|+.|+|++|++++..|..|..+++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 56666666665 4444332 2677777777777654443 366777777777777777776677777777777777777
Q ss_pred CcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCcccccCccccccCCcCCCCCCC
Q 005864 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCGDVE 321 (673)
Q Consensus 242 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~~ 321 (673)
|++++..+..|.++++|++|+|++|++++..|..|..+++|++|++++|++.+..+-.+...+.....+.++...|+.|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSST
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCCh
Confidence 77776666667777777777777777777777777777778888888887777665433222222233445556666654
Q ss_pred C
Q 005864 322 G 322 (673)
Q Consensus 322 ~ 322 (673)
.
T Consensus 168 ~ 168 (192)
T 1w8a_A 168 K 168 (192)
T ss_dssp T
T ss_pred H
Confidence 3
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.74 E-value=7.9e-19 Score=197.77 Aligned_cols=223 Identities=24% Similarity=0.241 Sum_probs=110.1
Q ss_pred CCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEc
Q 005864 40 MQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNF 119 (673)
Q Consensus 40 ~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 119 (673)
++++.|+|.+|.+.. .+. ..|+.++|+.|.|. .++++.|.+. ..+..+..++.|+.|+|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~-----~~l~~l~Ls~~~i~--------------~~~~~~n~~~-~~~~~~~~l~~L~~L~L 231 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQ-----ALLQHKKLSQYSID--------------EDDDIENRMV-MPKDSKYDDQLWHALDL 231 (727)
T ss_dssp ----------------------------------------------------------------------CCCCCCEEEC
T ss_pred CccceEEeeCCCCCc-chh-----hHhhcCccCccccc--------------Ccccccccee-cChhhhccCCCCcEEEC
Confidence 456666676666653 222 22344444444443 2234445554 55667777888888888
Q ss_pred ccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCc
Q 005864 120 SMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGS 199 (673)
Q Consensus 120 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~ 199 (673)
++|.+. .++..+..+++|++|+|++|.|+ .+|..|..+++|+.|+|++|.|+ .+|..|..+++|++|+|++|.++ .
T Consensus 232 s~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~ 307 (727)
T 4b8c_D 232 SNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-T 307 (727)
T ss_dssp TTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-C
T ss_pred CCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-c
Confidence 888887 56666668888888888888887 77777888888888888888888 66777888888888888888887 6
Q ss_pred CCccccccccccEEEccCCcCccCCchhhhcccC-CCeEeecCCcCCCCCcccccCCCcccEEEecCc--------cccc
Q 005864 200 IPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQ-LSELDLSHNFLGGEIPPQICNLESLEKLNVSHN--------NLSG 270 (673)
Q Consensus 200 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N--------~l~~ 270 (673)
+|..|.++++|+.|+|++|.+++.+|..+..+.. +..|+|++|.+++.+|.. |..|++++| .+.+
T Consensus 308 lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~ 381 (727)
T 4b8c_D 308 LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQ 381 (727)
T ss_dssp CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------------------
T ss_pred cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccc
Confidence 7777888888888888888888777777755422 234778888888777654 445566665 3333
Q ss_pred cCccccccCCCccEEEccCcccc
Q 005864 271 LIPSCFEGMHGLSCIDISYNELL 293 (673)
Q Consensus 271 ~~~~~~~~~~~L~~l~l~~N~l~ 293 (673)
..+..+..+..+....+++|-+.
T Consensus 382 ~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 382 STEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp --------------------CCC
T ss_pred cccchhhcccccceeeeeccccc
Confidence 33344445555555666666554
|
| >4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
Probab=99.72 E-value=2.5e-18 Score=193.73 Aligned_cols=223 Identities=20% Similarity=0.228 Sum_probs=106.1
Q ss_pred CCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEc
Q 005864 16 TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDI 95 (673)
Q Consensus 16 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 95 (673)
+.++.|+|..|.+... +. ..|+.++|+.|.|... +++.|.+. +++..|..+++|+.|+|
T Consensus 173 ~~~~~l~L~~n~~~~~-~~-----~~l~~l~Ls~~~i~~~--------------~~~~n~~~-~~~~~~~~l~~L~~L~L 231 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQ-----ALLQHKKLSQYSIDED--------------DDIENRMV-MPKDSKYDDQLWHALDL 231 (727)
T ss_dssp ----------------------------------------------------------------------CCCCCCEEEC
T ss_pred CccceEEeeCCCCCcc-hh-----hHhhcCccCcccccCc--------------ccccccee-cChhhhccCCCCcEEEC
Confidence 6689999999999853 32 3356667777766522 33344544 45566777777777777
Q ss_pred cCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCcccccc
Q 005864 96 SHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175 (673)
Q Consensus 96 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~ 175 (673)
++|.+..+ +..+..+++|++|+|++|.|+ .+|..|+.+++|+.|+|++|.|+ .+|..+..+++|++|+|++|.|+ .
T Consensus 232 s~n~l~~l-~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~ 307 (727)
T 4b8c_D 232 SNLQIFNI-SANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-T 307 (727)
T ss_dssp TTSCCSCC-CGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-C
T ss_pred CCCCCCCC-ChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-c
Confidence 77777633 344457778888888888887 67777888888888888888887 66878888888888888888887 6
Q ss_pred CCccccCCCCCCEEEeCCCCCCCcCCcccccccc-ccEEEccCCcCccCCchhhhcccCCCeEeecCC--------cCCC
Q 005864 176 LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLK-VHYLNLSNNQFRKEFPVELEKLVQLSELDLSHN--------FLGG 246 (673)
Q Consensus 176 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~-L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N--------~l~~ 246 (673)
+|..|..+++|+.|+|++|.+++.+|..+..+.. +..|+|++|.+++.+|. .|+.|+++.| .+.+
T Consensus 308 lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n~~~~~~~~~l~~ 381 (727)
T 4b8c_D 308 LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTDGEPQREYDSLQQ 381 (727)
T ss_dssp CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C---------------------
T ss_pred cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeecccccccccCCccc
Confidence 6777888888888888888888777777655422 23477888888876664 3455666666 3333
Q ss_pred CCcccccCCCcccEEEecCcccc
Q 005864 247 EIPPQICNLESLEKLNVSHNNLS 269 (673)
Q Consensus 247 ~~~~~~~~l~~L~~L~l~~N~l~ 269 (673)
..+..+..+..+....+++|-+.
T Consensus 382 ~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 382 STEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp --------------------CCC
T ss_pred cccchhhcccccceeeeeccccc
Confidence 34444555666667777777664
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.3e-17 Score=154.28 Aligned_cols=131 Identities=25% Similarity=0.299 Sum_probs=107.9
Q ss_pred CEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCC
Q 005864 163 NYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHN 242 (673)
Q Consensus 163 ~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N 242 (673)
+.+++++|+++ .+|..+. ++|+.|++++|.++ .+|..|..+++|+.|+|++|.|++..+..|..+++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 56777777777 4454332 57888888888887 66778888888888888888888877788888888899999999
Q ss_pred cCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCC
Q 005864 243 FLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIP 297 (673)
Q Consensus 243 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~ 297 (673)
.+++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|++.+...
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 8887777788889999999999999988877788889999999999999987654
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-17 Score=169.52 Aligned_cols=148 Identities=10% Similarity=0.097 Sum_probs=103.3
Q ss_pred HHHHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhh-----------hHHHHH--------HHHHHHHHhc
Q 005864 397 IIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSE-----------ISVQRE--------FLNEIKALTE 457 (673)
Q Consensus 397 ~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~-----------~~~~~~--------~~~e~~~l~~ 457 (673)
+.....-|++.+.||+|++|.||+|..++|+.||||+++.....- ...... ..+|...|.+
T Consensus 90 L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~r 169 (397)
T 4gyi_A 90 HAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKA 169 (397)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHH
Confidence 333344589999999999999999999999999999875421110 000111 2345555555
Q ss_pred cCCCcccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCC
Q 005864 458 IRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKN 537 (673)
Q Consensus 458 l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~N 537 (673)
+.+.++....-+.. ...++||||++|++|.++... .....++.|++.+|.|||+. |||||||||.|
T Consensus 170 L~~~gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~N 235 (397)
T 4gyi_A 170 LYEEGFPVPEPIAQ--SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAKH---GLIHGDFNEFN 235 (397)
T ss_dssp HHHTTCSCCCEEEE--ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTS
T ss_pred HHhcCCCCCeeeec--cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHH
Confidence 54433322111111 224799999999888765321 12346789999999999999 99999999999
Q ss_pred eEeCCCC----------ceEEecccceeecC
Q 005864 538 VLLSSEY----------EARVSDFGIAKFLK 558 (673)
Q Consensus 538 ill~~~~----------~~kl~Dfg~~~~~~ 558 (673)
||+++++ .+.|+||+-+....
T Consensus 236 ILl~~dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 236 ILIREEKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EEEEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred EEEeCCCCcccccccccceEEEEeCCcccCC
Confidence 9998876 38999999886543
|
| >1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7 | Back alignment and structure |
|---|
Probab=99.69 E-value=6.6e-17 Score=151.17 Aligned_cols=129 Identities=26% Similarity=0.353 Sum_probs=71.5
Q ss_pred ccccccccccccCCccccCCCCCCEEEccCccccccCCc-cccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCC
Q 005864 140 KLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPR-VLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNN 218 (673)
Q Consensus 140 ~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n 218 (673)
.+++++|.++ .+|..+. ++|++|++++|.+++..+. .|..+++|++|+|++|.+++..|..|..+++|+.|+|++|
T Consensus 12 ~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 3444444443 3333332 2555555555555544332 3555555666666666555555555555556666666666
Q ss_pred cCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCcccccc
Q 005864 219 QFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGL 271 (673)
Q Consensus 219 ~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 271 (673)
+|++..+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++.+.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 66555555555566666666666666655555566666666666666666544
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.69 E-value=8.9e-17 Score=147.00 Aligned_cols=132 Identities=23% Similarity=0.240 Sum_probs=78.3
Q ss_pred CCCCEEEeeCCccc-cCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEE
Q 005864 16 TNLKGLYLYSNSLS-GSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLD 94 (673)
Q Consensus 16 ~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 94 (673)
++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++..+..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 55666666666665 44555566666666666666666543 5566666666666666666655555555566666666
Q ss_pred ccCCccccccc-cCccccCCCcEEEcccCccCccCC---hhhhcccccccccccccccc
Q 005864 95 ISHNNFYGEIW-SSWGKCQQLGTLNFSMNNITGSIP---PEIGKLYQLHKLDFSLNQIV 149 (673)
Q Consensus 95 L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~---~~l~~l~~L~~L~l~~n~i~ 149 (673)
|++|.+++... ..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 66666654322 455556666666666666654333 34555555555555555554
|
| >2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.6e-16 Score=145.34 Aligned_cols=136 Identities=26% Similarity=0.279 Sum_probs=112.3
Q ss_pred CCCCCEEEccCcccc-ccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeE
Q 005864 159 LKSLNYLVLNGNKLS-GNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSEL 237 (673)
Q Consensus 159 l~~L~~L~L~~n~l~-~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 237 (673)
.++|+.|++++|.++ +.+|..+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..+..+++|+.|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 367888888888887 56677778888888888888888854 678888889999999999887778888888899999
Q ss_pred eecCCcCCCCC-cccccCCCcccEEEecCccccccCc---cccccCCCccEEEccCccccCCC
Q 005864 238 DLSHNFLGGEI-PPQICNLESLEKLNVSHNNLSGLIP---SCFEGMHGLSCIDISYNELLGLI 296 (673)
Q Consensus 238 ~ls~N~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~~~---~~~~~~~~L~~l~l~~N~l~~~~ 296 (673)
++++|.+++.. +..+..+++|+.|++++|++++..+ ..+..+++|++|++++|.+...+
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 163 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAP 163 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhcc
Confidence 99999988542 2678889999999999999987766 57888999999999999876544
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.66 E-value=3.7e-16 Score=139.69 Aligned_cols=129 Identities=26% Similarity=0.316 Sum_probs=105.4
Q ss_pred CCCCCEEEccCcccc-ccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeE
Q 005864 159 LKSLNYLVLNGNKLS-GNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSEL 237 (673)
Q Consensus 159 l~~L~~L~L~~n~l~-~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 237 (673)
.++|+.|++++|.++ +.+|..+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..+..+++|+.|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 367888888888887 56777778888888888888888754 667888888888888888887778888888889999
Q ss_pred eecCCcCCCC-CcccccCCCcccEEEecCccccccCc---cccccCCCccEEEccC
Q 005864 238 DLSHNFLGGE-IPPQICNLESLEKLNVSHNNLSGLIP---SCFEGMHGLSCIDISY 289 (673)
Q Consensus 238 ~ls~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~---~~~~~~~~L~~l~l~~ 289 (673)
++++|.+++. .+..+..+++|++|++++|++++..+ ..+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999988853 34778889999999999999988766 5788899999998864
|
| >2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A | Back alignment and structure |
|---|
Probab=99.65 E-value=2.2e-16 Score=141.22 Aligned_cols=128 Identities=24% Similarity=0.249 Sum_probs=99.6
Q ss_pred CCCCEEEeeCCccc-cCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEE
Q 005864 16 TNLKGLYLYSNSLS-GSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLD 94 (673)
Q Consensus 16 ~~L~~L~L~~n~i~-~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 94 (673)
++|++|++++|.++ +..|..+..+++|++|++++|.+++. ..+..+++|++|+|++|++++..+..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 67888888888887 66777788888888888888888755 6778888888888888888876677777788888888
Q ss_pred ccCCcccccc-ccCccccCCCcEEEcccCccCccCC---hhhhcccccccccccc
Q 005864 95 ISHNNFYGEI-WSSWGKCQQLGTLNFSMNNITGSIP---PEIGKLYQLHKLDFSL 145 (673)
Q Consensus 95 L~~n~i~~~~-~~~~~~l~~L~~L~L~~n~l~~~~~---~~l~~l~~L~~L~l~~ 145 (673)
+++|.+++.. +..+..+++|++|++++|.+++..+ ..+..+++|+.|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 8888887642 3667778888888888888876555 4677777777777753
|
| >2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=7.2e-16 Score=144.04 Aligned_cols=127 Identities=21% Similarity=0.243 Sum_probs=85.5
Q ss_pred CEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCC
Q 005864 19 KGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHN 98 (673)
Q Consensus 19 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 98 (673)
+++++++|+++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|+|+++.+..|..+++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 56777777777 4454443 46777777777776 55667777777777777777777777677777777777777777
Q ss_pred ccccccccCccccCCCcEEEcccCccCccCChhhhcccccccccccccccc
Q 005864 99 NFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIV 149 (673)
Q Consensus 99 ~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~ 149 (673)
.|+.+.+..|..+++|+.|+|++|.|+...+..|..+++|+.|+|++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 777666666666667777777766666554445555666666666665554
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.64 E-value=9.6e-16 Score=141.39 Aligned_cols=133 Identities=24% Similarity=0.232 Sum_probs=95.8
Q ss_pred CCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecC
Q 005864 162 LNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241 (673)
Q Consensus 162 L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~ 241 (673)
.+.+++++|+++. +|..+ .++|+.|++++|.+++..+..|..+++|+.|++++|.+++..+..|..+++|+.|++++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 4566666666663 33222 25677777777777755555667777777777777777766666677777788888888
Q ss_pred CcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCC
Q 005864 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIP 297 (673)
Q Consensus 242 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~ 297 (673)
|.+++..+..+..+++|+.|++++|++++..+..+..+++|++|++++|++.+.+|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 88876666667778888888888888887766667778888888888888887665
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.63 E-value=5.5e-15 Score=154.99 Aligned_cols=274 Identities=12% Similarity=0.082 Sum_probs=162.5
Q ss_pred ccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccc----
Q 005864 4 LSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGN---- 79 (673)
Q Consensus 4 i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~---- 79 (673)
++.+-..+|.++.+|+.+.|..+ ++.+...+|.++++|+.++|.++ ++.+...+|.++.+|+.+.+..+ +..+
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeeccee
Confidence 45556678999999999999754 77788889999999999999865 66567788999988888777543 2222
Q ss_pred ------------------cccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhcccccccc
Q 005864 80 ------------------ISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKL 141 (673)
Q Consensus 80 ------------------~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 141 (673)
...+|.++++|+.+.+.++ +..+...+|.++.+|+.+.+..+ ++.+...+|.++..|+.+
T Consensus 136 F~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i 213 (394)
T 4fs7_A 136 FKGCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENM 213 (394)
T ss_dssp TTTCCCSEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBC
T ss_pred eecccccccccCccccccchhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhcccccccee
Confidence 3345666666666666544 23355666666666666666554 443455566666666666
Q ss_pred ccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCc-------------------
Q 005864 142 DFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPE------------------- 202 (673)
Q Consensus 142 ~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~------------------- 202 (673)
.+..+... . ........+|+.+.+..+. +......|..+..|+.+.+..+... ....
T Consensus 214 ~~~~~~~~-i-~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~ 289 (394)
T 4fs7_A 214 EFPNSLYY-L-GDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP 289 (394)
T ss_dssp CCCTTCCE-E-CTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC
T ss_pred ecCCCceE-e-ehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec
Confidence 65544322 1 1112222344444444322 2233344555566666666554332 2233
Q ss_pred --cccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCC
Q 005864 203 --TLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMH 280 (673)
Q Consensus 203 --~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 280 (673)
.|..+.+|+.+.+.++ ++.+....|.++.+|+.++|.++ ++.+...+|.++.+|+.+++..| ++.+...+|.++.
T Consensus 290 ~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~ 366 (394)
T 4fs7_A 290 EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCI 366 (394)
T ss_dssp TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCT
T ss_pred cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCC
Confidence 3445555555555443 44444555666666666666543 44344455666666666666554 5555555666666
Q ss_pred CccEEEccC
Q 005864 281 GLSCIDISY 289 (673)
Q Consensus 281 ~L~~l~l~~ 289 (673)
+|+.+++..
T Consensus 367 ~L~~i~lp~ 375 (394)
T 4fs7_A 367 NLKKVELPK 375 (394)
T ss_dssp TCCEEEEEG
T ss_pred CCCEEEECC
Confidence 666666543
|
| >2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri} | Back alignment and structure |
|---|
Probab=99.61 E-value=3.9e-15 Score=137.25 Aligned_cols=127 Identities=24% Similarity=0.274 Sum_probs=63.6
Q ss_pred CEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCC
Q 005864 19 KGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHN 98 (673)
Q Consensus 19 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 98 (673)
+.+++++|+++. +|..+ .++|+.|++++|++++..+..|..+++|++|+|++|+++++++..|..+++|++|+|++|
T Consensus 10 ~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 455555555552 33222 245555555555555444444555555555555555555555555555555555555555
Q ss_pred ccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccc
Q 005864 99 NFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQI 148 (673)
Q Consensus 99 ~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i 148 (673)
.+++..+..+..+++|++|++++|.+++..+..+..+++|++|++++|.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 136 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 136 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCe
Confidence 55544444444455555555555555433333334444444444444444
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.61 E-value=1.5e-15 Score=139.95 Aligned_cols=135 Identities=18% Similarity=0.168 Sum_probs=91.0
Q ss_pred CcccCCCCCCEEEeeCCccccCCCccccCCC-CCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCC
Q 005864 10 PSVGNFTNLKGLYLYSNSLSGSVPGEIGNLM-QLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYP 88 (673)
Q Consensus 10 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~-~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~ 88 (673)
..+.++++|++|+|++|.++. ++. +..+. +|++|+|++|.|++. ..|..+++|++|+|++|+|+++++..|..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 345667777778888777774 343 44443 777777777777754 5677777777777777777776666667777
Q ss_pred CccEEEccCCccccccc-cCccccCCCcEEEcccCccCccCCh----hhhcccccccccccccccc
Q 005864 89 NLTFLDISHNNFYGEIW-SSWGKCQQLGTLNFSMNNITGSIPP----EIGKLYQLHKLDFSLNQIV 149 (673)
Q Consensus 89 ~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~----~l~~l~~L~~L~l~~n~i~ 149 (673)
+|++|+|++|.++.... ..+..+++|+.|++++|.++. .|. .+..+++|+.||+++|.+.
T Consensus 89 ~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 89 DLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp TCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 77777777777764432 356677777777777777763 343 3666666777777666654
|
| >1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4 | Back alignment and structure |
|---|
Probab=99.59 E-value=2.8e-15 Score=138.05 Aligned_cols=135 Identities=21% Similarity=0.208 Sum_probs=99.3
Q ss_pred cccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCC
Q 005864 155 ELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQL 234 (673)
Q Consensus 155 ~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 234 (673)
.+..+++|+.|++++|+++. ++......++|+.|++++|.+++. ..+..+++|+.|++++|.+++..+..+..+++|
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred hcCCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 34556777888888887773 344333334788888888888754 567778888888888888887665666888888
Q ss_pred CeEeecCCcCCCCCcc--cccCCCcccEEEecCccccccCcc---ccccCCCccEEEccCcccc
Q 005864 235 SELDLSHNFLGGEIPP--QICNLESLEKLNVSHNNLSGLIPS---CFEGMHGLSCIDISYNELL 293 (673)
Q Consensus 235 ~~L~ls~N~l~~~~~~--~~~~l~~L~~L~l~~N~l~~~~~~---~~~~~~~L~~l~l~~N~l~ 293 (673)
+.|++++|.+. .+|. .+..+++|+.|++++|+++...+. .+..+++|+.||+++|...
T Consensus 91 ~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 88888888886 5555 678888888888888888755332 4778888888888888764
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.58 E-value=8.6e-17 Score=151.36 Aligned_cols=156 Identities=22% Similarity=0.227 Sum_probs=123.1
Q ss_pred hhccccccccccccccccccCCc------cccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCcccc
Q 005864 132 IGKLYQLHKLDFSLNQIVGEIPI------ELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLG 205 (673)
Q Consensus 132 l~~l~~L~~L~l~~n~i~~~~~~------~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~ 205 (673)
+.....++.++++.+.+.+..|. .+..+++|++|++++|.+++ +| .+..+++|+.|++++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 44556677777777777666655 67778888888888888885 55 7788888999999998888 6777777
Q ss_pred ccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCc-ccccCCCcccEEEecCccccccCcc----------
Q 005864 206 NLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIP-PQICNLESLEKLNVSHNNLSGLIPS---------- 274 (673)
Q Consensus 206 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~---------- 274 (673)
.+++|+.|++++|++++ +| .+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|++.+..|.
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~ 168 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIE 168 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHH
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHH
Confidence 78899999999999986 34 68888899999999999984332 4788899999999999999877554
Q ss_pred ccccCCCccEEEccCccccC
Q 005864 275 CFEGMHGLSCIDISYNELLG 294 (673)
Q Consensus 275 ~~~~~~~L~~l~l~~N~l~~ 294 (673)
.+..+++|+.|| +|+++.
T Consensus 169 ~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 169 VVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HHHHCSSCSEEC--CGGGTT
T ss_pred HHHhCCCcEEEC--CcccCH
Confidence 378899999887 777764
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=99.56 E-value=2.2e-13 Score=142.67 Aligned_cols=279 Identities=13% Similarity=0.123 Sum_probs=209.5
Q ss_pred ccccCCCcccCCC-CCCEEEeeCCccccCCCccccCCCCCCEEEcccCc---cccccCccccCCCCCcEEEccCcccccc
Q 005864 4 LSGAIPPSVGNFT-NLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQ---LFGQIPRSLRNLASLNRVHLEQNHLTGN 79 (673)
Q Consensus 4 i~~~~p~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~---i~~~~~~~l~~l~~L~~L~L~~n~i~~~ 79 (673)
++..-..+|.+.. .|+.+.|..+ ++.+...+|.++++|+.+.+.+|. ++.+...+|.++.+|+.+.+..+ ++.+
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I 128 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEI 128 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEE
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-ccee
Confidence 4445566788874 6999999865 777888999999999999998864 66667788999999999888754 6778
Q ss_pred cccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCC
Q 005864 80 ISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNL 159 (673)
Q Consensus 80 ~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l 159 (673)
...+|..+.+|+.+.+..+ +..+...+|..+..|+.+.+..+ ++.+...+|.. ..|+.+.+..+-.. ....++..+
T Consensus 129 ~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c 204 (394)
T 4gt6_A 129 DSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSEC 204 (394)
T ss_dssp CTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTC
T ss_pred hhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhc
Confidence 8889999999999999754 45577888999999999998765 44455556654 56777777655332 444555555
Q ss_pred CCCCEEEccCc------------------------------------cccccCCccccCCCCCCEEEeCCCCCCCcCCcc
Q 005864 160 KSLNYLVLNGN------------------------------------KLSGNLPRVLGSLSELEYLDLSTNKLSGSIPET 203 (673)
Q Consensus 160 ~~L~~L~L~~n------------------------------------~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~ 203 (673)
.++.......+ .++.....+|..+..|+.+.+..+... ....+
T Consensus 205 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~a 283 (394)
T 4gt6_A 205 FALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGA 283 (394)
T ss_dssp TTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTT
T ss_pred cccceecccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccce-ecCcc
Confidence 55555443322 122233456788888999988776554 66678
Q ss_pred ccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCcc
Q 005864 204 LGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLS 283 (673)
Q Consensus 204 l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~ 283 (673)
|.++++|+.+.+. +.++.+....|.++.+|+.++|..+ ++.+...+|.++.+|+.+.|..+ ++.+...+|.++.+|+
T Consensus 284 F~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~ 360 (394)
T 4gt6_A 284 FMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALN 360 (394)
T ss_dssp TTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCC
T ss_pred cccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCC
Confidence 8889999999986 5566677788999999999999865 65455678889999999999654 7777788999999999
Q ss_pred EEEccCccc
Q 005864 284 CIDISYNEL 292 (673)
Q Consensus 284 ~l~l~~N~l 292 (673)
.+++.+|..
T Consensus 361 ~i~~~~~~~ 369 (394)
T 4gt6_A 361 NIEYSGSRS 369 (394)
T ss_dssp EEEESSCHH
T ss_pred EEEECCcee
Confidence 999988754
|
| >1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A | Back alignment and structure |
|---|
Probab=99.54 E-value=7.5e-17 Score=151.76 Aligned_cols=154 Identities=23% Similarity=0.291 Sum_probs=107.5
Q ss_pred ccCCCcEEEcccCccCccCCh------hhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCC
Q 005864 110 KCQQLGTLNFSMNNITGSIPP------EIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSL 183 (673)
Q Consensus 110 ~l~~L~~L~L~~n~l~~~~~~------~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l 183 (673)
....++.++++.+.+++..|. .+..+++|++|++++|.+++ +| .+..+++|++|++++|.++ .+|..+..+
T Consensus 16 ~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~ 92 (198)
T 1ds9_A 16 ERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVA 92 (198)
T ss_dssp HTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHH
T ss_pred hcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcC
Confidence 344455555555555544444 67777777777777777764 45 6677777788888877777 456666666
Q ss_pred CCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCc-hhhhcccCCCeEeecCCcCCCCCcc----------cc
Q 005864 184 SELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFP-VELEKLVQLSELDLSHNFLGGEIPP----------QI 252 (673)
Q Consensus 184 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~ls~N~l~~~~~~----------~~ 252 (673)
++|+.|++++|.+++ +| .+..+++|+.|++++|++++..+ ..+..+++|+.|++++|++.+..|. .+
T Consensus 93 ~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 170 (198)
T 1ds9_A 93 DTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVV 170 (198)
T ss_dssp HHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHH
T ss_pred CcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHH
Confidence 788888888888874 34 57778888888888888875433 4677788888888888888755443 26
Q ss_pred cCCCcccEEEecCccccc
Q 005864 253 CNLESLEKLNVSHNNLSG 270 (673)
Q Consensus 253 ~~l~~L~~L~l~~N~l~~ 270 (673)
..+++|+.|+ +|.++.
T Consensus 171 ~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 171 KRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp HHCSSCSEEC--CGGGTT
T ss_pred HhCCCcEEEC--CcccCH
Confidence 7788888876 676654
|
| >4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=99.53 E-value=1.3e-13 Score=144.43 Aligned_cols=272 Identities=11% Similarity=0.031 Sum_probs=196.4
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccC---------------------ccccccCccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNN---------------------QLFGQIPRSL 60 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n---------------------~i~~~~~~~l 60 (673)
++|+..-..+|.++++|+.++|..+ ++.+...+|.++.+|+.+.+..+ .+......+|
T Consensus 80 ~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~~~aF~~~~~~~~~~~~~~~~i~~~aF 158 (394)
T 4fs7_A 80 STVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIGVEAFKGCDFKEITIPEGVTVIGDEAF 158 (394)
T ss_dssp TTCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEECTTTTTTCCCSEEECCTTCCEECTTTT
T ss_pred CCccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeecceeeecccccccccCccccccchhhh
Confidence 4566666788999999999999865 66677788888888887776543 1122345678
Q ss_pred cCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccC---------------
Q 005864 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNIT--------------- 125 (673)
Q Consensus 61 ~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~--------------- 125 (673)
.++++|+.+.+.++ +..+...+|.++++|+.+++..+ ++.+...+|.++..|+.+.+..+...
T Consensus 159 ~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~i~ 236 (394)
T 4fs7_A 159 ATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVKNII 236 (394)
T ss_dssp TTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCCEEE
T ss_pred cccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCCceEE
Confidence 88999999999765 45578889999999999999876 66677788888888888777655332
Q ss_pred ------ccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCc
Q 005864 126 ------GSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGS 199 (673)
Q Consensus 126 ------~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~ 199 (673)
.+...+|..+..|+.+.+..+... .....|..++.++.+....+.+ ....|..+.+|+.+.+..+ ++..
T Consensus 237 ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I 311 (394)
T 4fs7_A 237 IPDSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFI 311 (394)
T ss_dssp ECTTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEE
T ss_pred ECCCceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceee---ccccccccccccccccccc-ccee
Confidence 112233444444555555444332 4444555555555555554432 2346778889999998765 5546
Q ss_pred CCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccC
Q 005864 200 IPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGM 279 (673)
Q Consensus 200 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~ 279 (673)
...+|.++.+|+.+++.++ ++.+....|.++.+|+.+++..| ++.....+|.++.+|+.+++..+ ++. ...+|.++
T Consensus 312 ~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~~-~~~~F~~c 387 (394)
T 4fs7_A 312 GEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LEQ-YRYDFEDT 387 (394)
T ss_dssp CTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GGG-GGGGBCTT
T ss_pred chhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CEE-hhheecCC
Confidence 6778999999999999755 77778889999999999999887 76566778999999999999866 332 24678888
Q ss_pred CCccEE
Q 005864 280 HGLSCI 285 (673)
Q Consensus 280 ~~L~~l 285 (673)
++|+.+
T Consensus 388 ~~L~~I 393 (394)
T 4fs7_A 388 TKFKWI 393 (394)
T ss_dssp CEEEEE
T ss_pred CCCcEE
Confidence 888765
|
| >4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165} | Back alignment and structure |
|---|
Probab=99.52 E-value=4.1e-13 Score=140.63 Aligned_cols=279 Identities=10% Similarity=0.105 Sum_probs=206.6
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCc---cccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNS---LSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTG 78 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~---i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~ 78 (673)
+.++..-..+|.++++|+.+.+..|. ++.+...+|.++.+|+.+.+.++ ++.....+|..+.+|+.+.+.. .+..
T Consensus 73 ~svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~-~~~~ 150 (394)
T 4gt6_A 73 DTVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPE-GVTS 150 (394)
T ss_dssp TTCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCT-TCCE
T ss_pred CCeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccccccc-eeee
Confidence 34666777889999999999998874 77778889999999999888765 5556778899999999999975 4566
Q ss_pred ccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhcccccccccccc-------------
Q 005864 79 NISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSL------------- 145 (673)
Q Consensus 79 ~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~------------- 145 (673)
+...+|..+.+|+.+.+..+ +..+...+|.. ..|+.+.+..+-.. +...+|..+.+|.......
T Consensus 151 I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~ 227 (394)
T 4gt6_A 151 VADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPAIDNVLYEK 227 (394)
T ss_dssp ECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEE
T ss_pred ecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhhccccceecccccccccccceeecc
Confidence 77888999999999999765 55566777754 56888887655333 4445555555544433221
Q ss_pred -----------------------ccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCc
Q 005864 146 -----------------------NQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPE 202 (673)
Q Consensus 146 -----------------------n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~ 202 (673)
+.++.....+|..+..|+.+.+..+... ....+|.++++|+.+.+.. .++.....
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~~-~i~~I~~~ 305 (394)
T 4gt6_A 228 SANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFSS-RITELPES 305 (394)
T ss_dssp CTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECCT-TCCEECTT
T ss_pred cccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccce-ecCcccccccccccccCCC-cccccCce
Confidence 1222234567888899999999877655 6777899999999999974 55546677
Q ss_pred cccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCc
Q 005864 203 TLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGL 282 (673)
Q Consensus 203 ~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L 282 (673)
+|.++.+|+.+.+..+ ++.+....|.++.+|+.+.|..+ ++.+...+|.++.+|+.+++.+|.... ..+....+|
T Consensus 306 aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L 380 (394)
T 4gt6_A 306 VFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGL 380 (394)
T ss_dssp TTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC
T ss_pred eecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCC
Confidence 8999999999999865 77777889999999999999765 665667889999999999999986542 456777888
Q ss_pred cEEEccCccc
Q 005864 283 SCIDISYNEL 292 (673)
Q Consensus 283 ~~l~l~~N~l 292 (673)
+.+.+..|.+
T Consensus 381 ~~i~i~~~~~ 390 (394)
T 4gt6_A 381 QNLPVAPGSI 390 (394)
T ss_dssp ----------
T ss_pred CEEEeCCCCE
Confidence 8888776654
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.51 E-value=5.4e-14 Score=128.38 Aligned_cols=109 Identities=26% Similarity=0.288 Sum_probs=76.5
Q ss_pred CCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecC
Q 005864 186 LEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSH 265 (673)
Q Consensus 186 L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~ 265 (673)
.+.+++++|.++ .+|..+. ++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 456666666666 3454442 5667777777777766666777777777777777777765555667777777777777
Q ss_pred ccccccCccccccCCCccEEEccCccccCCCC
Q 005864 266 NNLSGLIPSCFEGMHGLSCIDISYNELLGLIP 297 (673)
Q Consensus 266 N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~ 297 (673)
|+|++..+..|..+++|+.|+|++|++.+.++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 77777766677777778888888887777655
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.48 E-value=1.3e-13 Score=126.18 Aligned_cols=108 Identities=23% Similarity=0.279 Sum_probs=68.3
Q ss_pred CEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCc
Q 005864 187 EYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHN 266 (673)
Q Consensus 187 ~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N 266 (673)
+.+++++|.++ .+|..+. ++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45556666554 4444443 45666666666666655666666666666666666666544445566677777777777
Q ss_pred cccccCccccccCCCccEEEccCccccCCCC
Q 005864 267 NLSGLIPSCFEGMHGLSCIDISYNELLGLIP 297 (673)
Q Consensus 267 ~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~ 297 (673)
+|+++.+..|..+++|+.|+|++|++.+.++
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 7766655566677777777777777766554
|
| >3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D | Back alignment and structure |
|---|
Probab=99.46 E-value=2.5e-13 Score=123.97 Aligned_cols=107 Identities=23% Similarity=0.230 Sum_probs=89.1
Q ss_pred CCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccC
Q 005864 18 LKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISH 97 (673)
Q Consensus 18 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 97 (673)
.++|++++|.++ .+|..+. ++|++|+|++|+|++..|..|..+++|++|+|++|+|+++++..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 578888888888 4565553 7888899999988877788888888899999998888888888888888888888888
Q ss_pred CccccccccCccccCCCcEEEcccCccCcc
Q 005864 98 NNFYGEIWSSWGKCQQLGTLNFSMNNITGS 127 (673)
Q Consensus 98 n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 127 (673)
|+|+++.+..|..+++|+.|+|++|.++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 888887777788888888888888888743
|
| >2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus} | Back alignment and structure |
|---|
Probab=99.46 E-value=2.9e-13 Score=123.92 Aligned_cols=106 Identities=23% Similarity=0.250 Sum_probs=90.2
Q ss_pred CCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccC
Q 005864 18 LKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISH 97 (673)
Q Consensus 18 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 97 (673)
-+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|+++++..|..+++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 478899999987 5666554 7899999999999887788888999999999999999988888888889999999999
Q ss_pred CccccccccCccccCCCcEEEcccCccCc
Q 005864 98 NNFYGEIWSSWGKCQQLGTLNFSMNNITG 126 (673)
Q Consensus 98 n~i~~~~~~~~~~l~~L~~L~L~~n~l~~ 126 (673)
|+|+++.+..|..+++|+.|+|++|.+..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccc
Confidence 99987777778888889999999888873
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.43 E-value=6.6e-15 Score=152.07 Aligned_cols=158 Identities=18% Similarity=0.140 Sum_probs=70.5
Q ss_pred CCccEEEccCCccccccccCcccc-----CCCcEEEcccCccCccCChhh-hccccccccccccccccccCCccc-----
Q 005864 88 PNLTFLDISHNNFYGEIWSSWGKC-----QQLGTLNFSMNNITGSIPPEI-GKLYQLHKLDFSLNQIVGEIPIEL----- 156 (673)
Q Consensus 88 ~~L~~L~L~~n~i~~~~~~~~~~l-----~~L~~L~L~~n~l~~~~~~~l-~~l~~L~~L~l~~n~i~~~~~~~l----- 156 (673)
++|++|+|++|.++......+..+ .+|+.|+|++|.++......+ ..+++|++|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 345555555555554333333322 455555555555543222222 223455555555555543222222
Q ss_pred cCCCCCCEEEccCcccccc----CCccccCCCCCCEEEeCCCCCCCcC----CccccccccccEEEccCCcCccCCc---
Q 005864 157 GNLKSLNYLVLNGNKLSGN----LPRVLGSLSELEYLDLSTNKLSGSI----PETLGNLLKVHYLNLSNNQFRKEFP--- 225 (673)
Q Consensus 157 ~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~l~~n~l~~~~----~~~l~~l~~L~~L~l~~n~l~~~~~--- 225 (673)
...++|++|+|++|.+++. ++..+..+++|++|+|++|.+++.. +..+...++|+.|+|++|.|+....
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 1234566666666655431 2223344555555555555554321 2333344455555555555543211
Q ss_pred -hhhhcccCCCeEeecCCcCC
Q 005864 226 -VELEKLVQLSELDLSHNFLG 245 (673)
Q Consensus 226 -~~~~~l~~L~~L~ls~N~l~ 245 (673)
..+...++|+.|+|++|.|+
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCC
T ss_pred HHHHHhCCCCCEEeccCCCCC
Confidence 12223344444444444444
|
| >3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.41 E-value=6.1e-15 Score=152.35 Aligned_cols=169 Identities=17% Similarity=0.152 Sum_probs=123.7
Q ss_pred CCCCcEEEccCcccccccccccC-----CCCCccEEEccCCccccccccCcc-ccCCCcEEEcccCccCccCChhhh---
Q 005864 63 LASLNRVHLEQNHLTGNISEVFG-----IYPNLTFLDISHNNFYGEIWSSWG-KCQQLGTLNFSMNNITGSIPPEIG--- 133 (673)
Q Consensus 63 l~~L~~L~L~~n~i~~~~~~~~~-----~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~l~--- 133 (673)
+++|+.|+|++|.++......+. ..++|++|+|++|.++......+. .+++|+.|+|++|.++......+.
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 35788888888888755443332 236888999998888755444433 457888999999988765444442
Q ss_pred --cccccccccccccccccc----CCccccCCCCCCEEEccCcccccc----CCccccCCCCCCEEEeCCCCCCCc----
Q 005864 134 --KLYQLHKLDFSLNQIVGE----IPIELGNLKSLNYLVLNGNKLSGN----LPRVLGSLSELEYLDLSTNKLSGS---- 199 (673)
Q Consensus 134 --~l~~L~~L~l~~n~i~~~----~~~~l~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~l~~n~l~~~---- 199 (673)
..++|++|+|++|.++.. ++..+..+++|++|+|++|.+++. ++..+...++|+.|+|++|.+++.
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 357799999999988742 344456788999999999999853 245667788999999999999753
Q ss_pred CCccccccccccEEEccCCcCccCCchhhhcc
Q 005864 200 IPETLGNLLKVHYLNLSNNQFRKEFPVELEKL 231 (673)
Q Consensus 200 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l 231 (673)
++..+...++|++|+|++|.|+......+..+
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~ 262 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSSEGRQVLRDL 262 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCHHHHHHHHHC
T ss_pred HHHHHHhCCCCCEEeccCCCCCHHHHHHHHHH
Confidence 33445567899999999999987655555543
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=99.30 E-value=8.7e-11 Score=122.31 Aligned_cols=268 Identities=11% Similarity=0.052 Sum_probs=165.9
Q ss_pred CcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCC
Q 005864 10 PSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPN 89 (673)
Q Consensus 10 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 89 (673)
+++....+|+.+.+.. .++.+...+|.++.+|+.++|.++ ++.+...+|.++ +|+.+.+.. .+..+...+|... +
T Consensus 40 ~~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~-~l~~I~~~aF~~~-~ 114 (379)
T 4h09_A 40 PWYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGME-RVKKFGDYVFQGT-D 114 (379)
T ss_dssp TTGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECT-TCCEECTTTTTTC-C
T ss_pred cccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCc-eeeEeccceeccC-C
Confidence 4566677888888875 466677888999999999998755 666677788887 677877764 4666777777764 7
Q ss_pred ccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhcccccccccccccccc--------------------
Q 005864 90 LTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIV-------------------- 149 (673)
Q Consensus 90 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~-------------------- 149 (673)
|+.+.+..+ +..+...+|.++ +|+.+.+..+ ++.+...+|..+.+++.+.+..+...
T Consensus 115 L~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (379)
T 4h09_A 115 LDDFEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYP 191 (379)
T ss_dssp CSEEECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECC
T ss_pred cccccCCCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccc
Confidence 888888765 333555566554 4555555433 33344555555565555544432211
Q ss_pred ---------------ccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEE
Q 005864 150 ---------------GEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLN 214 (673)
Q Consensus 150 ---------------~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 214 (673)
......+..+.+|+.+.+..+ +......+|..+..|+.+.+..+ ++.....+|.++.+|+.+.
T Consensus 192 ~~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~ 269 (379)
T 4h09_A 192 AAKTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLN 269 (379)
T ss_dssp TTCCCSEEECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEE
T ss_pred ccccccccccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccc
Confidence 112233444455666665543 33244455666667777766654 4334455666666777776
Q ss_pred ccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccC
Q 005864 215 LSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISY 289 (673)
Q Consensus 215 l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~ 289 (673)
+..+ ++.+....|.++.+|+.+.+.++.++......|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.+..
T Consensus 270 l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 270 FYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp ECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred cccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 6543 44455556666777777777766666445556667777777777543 5555556677777777666543
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.29 E-value=1e-11 Score=122.34 Aligned_cols=146 Identities=14% Similarity=0.096 Sum_probs=114.1
Q ss_pred HHHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCee
Q 005864 398 IRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 398 ~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~ 476 (673)
......|.+....+.|+.+.||++... |+.+++|........ ....+.+|+.+++.+. +..+.++++++...+..
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~---~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~ 85 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG---TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWS 85 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT---STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCC---CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCce
Confidence 344567888888999999999999864 789999998653211 1235788999999884 67788999999988899
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcC--------------------------------
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDC-------------------------------- 524 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-------------------------------- 524 (673)
++||||++|.+|.+.+... .....++.+++++++.||+..
T Consensus 86 ~lv~e~i~G~~l~~~~~~~--------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (263)
T 3tm0_A 86 NLLMSEADGVLCSEEYEDE--------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCEN 157 (263)
T ss_dssp EEEEECCSSEEHHHHCCTT--------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGG
T ss_pred EEEEEecCCeehhhccCCc--------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccc
Confidence 9999999999998763211 123467889999999999810
Q ss_pred ------------------------CCCeEEecCCCCCeEeCCCCceEEeccccee
Q 005864 525 ------------------------FPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555 (673)
Q Consensus 525 ------------------------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 555 (673)
.+.++|+|++|.||+++++..+.|+||+.+.
T Consensus 158 ~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 158 WEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp GSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 0358999999999999876556799999875
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.29 E-value=3.6e-12 Score=131.09 Aligned_cols=102 Identities=25% Similarity=0.222 Sum_probs=52.5
Q ss_pred EEccCc-cccccCCccccCCCCCCEEEeCC-CCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCC
Q 005864 165 LVLNGN-KLSGNLPRVLGSLSELEYLDLST-NKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHN 242 (673)
Q Consensus 165 L~L~~n-~l~~~~~~~l~~l~~L~~L~l~~-n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N 242 (673)
++++++ +++ .+|. +..+++|+.|+|++ |.+++..+..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 455554 555 3444 55555555555553 5555444445555555555555555555555555555555555555555
Q ss_pred cCCCCCcccccCCCcccEEEecCcccc
Q 005864 243 FLGGEIPPQICNLESLEKLNVSHNNLS 269 (673)
Q Consensus 243 ~l~~~~~~~~~~l~~L~~L~l~~N~l~ 269 (673)
+|++..+..|..++ |+.|+|.+|.+.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 55533333333333 555555555544
|
| >2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7 | Back alignment and structure |
|---|
Probab=99.29 E-value=1.1e-11 Score=127.57 Aligned_cols=105 Identities=26% Similarity=0.310 Sum_probs=87.4
Q ss_pred CEEEeeCC-ccccCCCccccCCCCCCEEEccc-CccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEcc
Q 005864 19 KGLYLYSN-SLSGSVPGEIGNLMQLTNLEIDN-NQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDIS 96 (673)
Q Consensus 19 ~~L~L~~n-~i~~~~~~~~~~l~~L~~L~L~~-n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 96 (673)
..++++++ +++ .+|. |..+++|+.|+|++ |.|++..+..|.++++|+.|+|++|+|+++++..|..+++|++|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 45688887 788 4666 88888899999986 88887777888888999999999999888888888888899999999
Q ss_pred CCccccccccCccccCCCcEEEcccCccCc
Q 005864 97 HNNFYGEIWSSWGKCQQLGTLNFSMNNITG 126 (673)
Q Consensus 97 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~ 126 (673)
+|+|+++++..|..+. |+.|+|.+|.+..
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 9988877777777666 8888888888874
|
| >4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum} | Back alignment and structure |
|---|
Probab=99.27 E-value=2.1e-10 Score=119.37 Aligned_cols=266 Identities=12% Similarity=0.062 Sum_probs=197.2
Q ss_pred CccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccccc
Q 005864 3 HLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISE 82 (673)
Q Consensus 3 ~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~ 82 (673)
.|+.+-..+|.++.+|+.+.|..+ ++.+...+|.++ +|+.+.+.++ +..+...+|... +|+.+.+..+ +..+...
T Consensus 56 ~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~~-~L~~i~lp~~-~~~i~~~ 130 (379)
T 4h09_A 56 GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQGT-DLDDFEFPGA-TTEIGNY 130 (379)
T ss_dssp TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTTC-CCSEEECCTT-CCEECTT
T ss_pred CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceeccC-CcccccCCCc-ccccccc
Confidence 356666788999999999999865 776888899987 7888888765 554566677764 8999999765 4445566
Q ss_pred ccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCcc-----------------------------------Ccc
Q 005864 83 VFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNI-----------------------------------TGS 127 (673)
Q Consensus 83 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l-----------------------------------~~~ 127 (673)
+|.+. +|+.+.+..+ ++.+...+|..+..++.+.+..+.. ...
T Consensus 131 ~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 208 (379)
T 4h09_A 131 IFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTV 208 (379)
T ss_dssp TTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEE
T ss_pred ccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEE
Confidence 66654 5666655443 4445566666666666665544321 112
Q ss_pred CChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCcccccc
Q 005864 128 IPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNL 207 (673)
Q Consensus 128 ~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l 207 (673)
...++....+|+.+.+..+ +.......+..+..|+.+.+..+ ++.+...+|.++.+|+.+.+..+ +.......|..+
T Consensus 209 ~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c 285 (379)
T 4h09_A 209 TAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGC 285 (379)
T ss_dssp CTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTC
T ss_pred eecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccc
Confidence 3345556667777777655 34466777889999999999876 66567778999999999999765 544666789999
Q ss_pred ccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCC
Q 005864 208 LKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMH 280 (673)
Q Consensus 208 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~ 280 (673)
++|+.+.+.++.++.+....|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.+..+ ++.+...+|.++.
T Consensus 286 ~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 286 SNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp TTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred cccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 99999999999999888889999999999999865 66455678999999999999765 6666667776653
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=99.16 E-value=5.5e-11 Score=116.92 Aligned_cols=137 Identities=17% Similarity=0.133 Sum_probs=101.1
Q ss_pred CCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCc--ccceeeeeecCCeeeEEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN--IVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~ 480 (673)
.+.+....+.|..+.||++...+|+.+++|..... ....+.+|+.+++.+++.+ +.+++++...++..++||
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~ 94 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLL 94 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEE
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEE
Confidence 34443333466679999998878889999987543 1245678999999885444 556888888888889999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcC------------------------------------
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDC------------------------------------ 524 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------ 524 (673)
||++|.++. ... .+ ...++.++++.++.||+..
T Consensus 95 e~i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (264)
T 1nd4_A 95 GEVPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQ 163 (264)
T ss_dssp ECCSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGT
T ss_pred EecCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhcc
Confidence 999998884 211 11 1256778888888888752
Q ss_pred -------------------CCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 525 -------------------FPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 525 -------------------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
.+.++|+|++|.||++++++.+.|+|||.+..
T Consensus 164 ~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 164 GLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp TCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 01299999999999998776677999998763
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.10 E-value=3.9e-11 Score=122.69 Aligned_cols=84 Identities=17% Similarity=0.267 Sum_probs=42.5
Q ss_pred CCCCCEEEeCCCCCCCcCCcccc---ccccccEEEccCCcCccCC----chhhhcccCCCeEeecCCcCCCCCcccccCC
Q 005864 183 LSELEYLDLSTNKLSGSIPETLG---NLLKVHYLNLSNNQFRKEF----PVELEKLVQLSELDLSHNFLGGEIPPQICNL 255 (673)
Q Consensus 183 l~~L~~L~l~~n~l~~~~~~~l~---~l~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l 255 (673)
+++|+.|+|++|.+.+..+..+. .+++|+.|+|+.|.+++.. +..+..+++|+.|+|++|.+++.....+...
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 45566666655555432222222 3556666666666665432 2223445666667776666654333333321
Q ss_pred CcccEEEecCcc
Q 005864 256 ESLEKLNVSHNN 267 (673)
Q Consensus 256 ~~L~~L~l~~N~ 267 (673)
- ...+++++|+
T Consensus 331 l-g~~~~~~~~~ 341 (362)
T 2ra8_A 331 L-PMKIDVSDSQ 341 (362)
T ss_dssp C-CSEEECCSBC
T ss_pred c-CCEEEecCCc
Confidence 0 2446666665
|
| >2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.08 E-value=5.3e-11 Score=121.66 Aligned_cols=159 Identities=18% Similarity=0.183 Sum_probs=103.5
Q ss_pred CChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCcccc--CCCCCCEEEeCC--CCCCCc----
Q 005864 128 IPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG--SLSELEYLDLST--NKLSGS---- 199 (673)
Q Consensus 128 ~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~--~l~~L~~L~l~~--n~l~~~---- 199 (673)
+...+..+++|+.|+|++|.-. ..+. +. +++|++|+|..|.++......+. .+|+|+.|+|+. |...+.
T Consensus 164 L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~ 240 (362)
T 2ra8_A 164 LSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMN 240 (362)
T ss_dssp CHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGG
T ss_pred HHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHH
Confidence 3455667788888888877311 2222 33 68899999888887654333443 678899988853 221111
Q ss_pred -CCccc--cccccccEEEccCCcCccCCchhhh---cccCCCeEeecCCcCCCCC----cccccCCCcccEEEecCcccc
Q 005864 200 -IPETL--GNLLKVHYLNLSNNQFRKEFPVELE---KLVQLSELDLSHNFLGGEI----PPQICNLESLEKLNVSHNNLS 269 (673)
Q Consensus 200 -~~~~l--~~l~~L~~L~l~~n~l~~~~~~~~~---~l~~L~~L~ls~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~ 269 (673)
+...+ ..+++|+.|+|++|.+.+..+..+. .+++|+.|+|+.|.+.+.. +..+..+++|+.|+|++|.++
T Consensus 241 ~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 241 VFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp GTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 11122 2478999999999988754444443 4778999999999887643 333456788999999999887
Q ss_pred ccCcccccc-CCCccEEEccCcc
Q 005864 270 GLIPSCFEG-MHGLSCIDISYNE 291 (673)
Q Consensus 270 ~~~~~~~~~-~~~L~~l~l~~N~ 291 (673)
...-..+.. + ...+++++++
T Consensus 321 d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 321 DEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHHHC--CSEEECCSBC
T ss_pred HHHHHHHHHHc--CCEEEecCCc
Confidence 554444443 2 3567888776
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=99.07 E-value=4.8e-10 Score=115.70 Aligned_cols=143 Identities=16% Similarity=0.275 Sum_probs=107.1
Q ss_pred ccceeccCCcEEEEEEEeCCCCEEEEEeec--cchhhhhHHHHHHHHHHHHHhccC--CCcccceeeeeecC---CeeeE
Q 005864 406 AEQCIGIGGQASVYRGELPSGEVVAVKKFH--SLLLSEISVQREFLNEIKALTEIR--HRNIVKFYGFCSHP---RHSFL 478 (673)
Q Consensus 406 ~~~~ig~G~~g~vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~---~~~~l 478 (673)
..+.++.|.++.||+.... +..+++|+.. .... ......+.+|+.+++.++ +..+.++++++.+. +..++
T Consensus 42 ~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~--~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~ 118 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKL--LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFY 118 (359)
T ss_dssp EEEECCC-CCSCEEEEECS-SCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEE
T ss_pred eEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCC--CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEE
Confidence 4567999999999999875 4678899875 3211 112356788999999997 45688899988766 45899
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcC----------------------------------
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDC---------------------------------- 524 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---------------------------------- 524 (673)
||||++|.++.+.. ...++...+..++.++++.|+.||+..
T Consensus 119 vme~v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (359)
T 3dxp_A 119 IMEFVSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES 193 (359)
T ss_dssp EEECCCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred EEEecCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence 99999998875421 123567788889999999999999731
Q ss_pred ---------------------CCCeEEecCCCCCeEeCCCCc--eEEecccceee
Q 005864 525 ---------------------FPPIVHRDISSKNVLLSSEYE--ARVSDFGIAKF 556 (673)
Q Consensus 525 ---------------------~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~~~~ 556 (673)
.+.++|+|+++.||++++++. +.|+||+.+..
T Consensus 194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247899999999999997753 68999999875
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.98 E-value=3.9e-10 Score=113.43 Aligned_cols=186 Identities=19% Similarity=0.189 Sum_probs=122.9
Q ss_pred cceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCc--ccceeeeeecCC---eeeEEE
Q 005864 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRN--IVKFYGFCSHPR---HSFLVY 480 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~ 480 (673)
.+.++.|.+..||++. ..+++|+.... .....+.+|+++++.+. +.. +.+++.+...++ ..|+||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEE
Confidence 4669999999999863 56889985432 23567889999998884 333 344555543333 347899
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcC------------------------------------
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDC------------------------------------ 524 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~------------------------------------ 524 (673)
|+++|.++.+... ..++..++..++.++++.++.||+..
T Consensus 96 ~~i~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 96 TKIKGVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp ECCCCEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred cccCCeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 9999988875432 22566777788888888888888621
Q ss_pred -------------------CCCeEEecCCCCCeEeCC--CCceEEecccceeecCCCCCCce--ec---c---------c
Q 005864 525 -------------------FPPIVHRDISSKNVLLSS--EYEARVSDFGIAKFLKPGSSNWT--EF---A---------G 569 (673)
Q Consensus 525 -------------------~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~~~~~~~~~~--~~---~---------~ 569 (673)
.+.++|+|++|.||++++ +..+.|+||+.+..-.+...... .. . .
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~ 250 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILN 250 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHH
Confidence 135799999999999998 45678999999876432110000 00 0 0
Q ss_pred cccccc-ccccccCCcCcchhHHHHHHHHHHHHhCCCCCc
Q 005864 570 TFGYVA-PELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD 608 (673)
Q Consensus 570 ~~~y~a-PE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 608 (673)
..+... |+.... .....+.|++|.++|++.+|+.+|-
T Consensus 251 ~Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 251 HYKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HcCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 001111 221111 1223689999999999999998853
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.69 E-value=4e-09 Score=97.19 Aligned_cols=91 Identities=12% Similarity=0.134 Sum_probs=44.2
Q ss_pred cccCCCCCCEEEcccC-ccccc----cCccccCCCCCcEEEccCccccccc----ccccCCCCCccEEEccCCcccccc-
Q 005864 35 EIGNLMQLTNLEIDNN-QLFGQ----IPRSLRNLASLNRVHLEQNHLTGNI----SEVFGIYPNLTFLDISHNNFYGEI- 104 (673)
Q Consensus 35 ~~~~l~~L~~L~L~~n-~i~~~----~~~~l~~l~~L~~L~L~~n~i~~~~----~~~~~~l~~L~~L~L~~n~i~~~~- 104 (673)
.+...++|++|+|++| .|... +..++...++|++|+|++|.|+... ...+...++|++|+|++|.|+...
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3445556666666665 55432 2233444555566666665555322 223334455555555555555332
Q ss_pred ---ccCccccCCCcEEEc--ccCccC
Q 005864 105 ---WSSWGKCQQLGTLNF--SMNNIT 125 (673)
Q Consensus 105 ---~~~~~~l~~L~~L~L--~~n~l~ 125 (673)
..++...++|++|+| ++|.|+
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCC
Confidence 223333444555555 445544
|
| >1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=98.68 E-value=1.6e-09 Score=99.88 Aligned_cols=118 Identities=13% Similarity=0.153 Sum_probs=93.2
Q ss_pred CCCcccCCCCCCEEEeeCC-ccccC----CCccccCCCCCCEEEcccCcccccc----CccccCCCCCcEEEccCccccc
Q 005864 8 IPPSVGNFTNLKGLYLYSN-SLSGS----VPGEIGNLMQLTNLEIDNNQLFGQI----PRSLRNLASLNRVHLEQNHLTG 78 (673)
Q Consensus 8 ~p~~~~~l~~L~~L~L~~n-~i~~~----~~~~~~~l~~L~~L~L~~n~i~~~~----~~~l~~l~~L~~L~L~~n~i~~ 78 (673)
+...+...+.|++|+|++| .|... +...+...++|++|+|++|.|.+.. ...+...++|++|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 4455678899999999999 88743 3445677899999999999998543 4556667899999999999995
Q ss_pred c----cccccCCCCCccEEEc--cCCcccccccc----CccccCCCcEEEcccCccC
Q 005864 79 N----ISEVFGIYPNLTFLDI--SHNNFYGEIWS----SWGKCQQLGTLNFSMNNIT 125 (673)
Q Consensus 79 ~----~~~~~~~l~~L~~L~L--~~n~i~~~~~~----~~~~l~~L~~L~L~~n~l~ 125 (673)
. ....+...++|++|+| ++|.|+..... .+...++|++|+|++|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4 3566778899999999 88999865433 3445588888888888876
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=98.54 E-value=4.8e-07 Score=89.03 Aligned_cols=136 Identities=15% Similarity=0.185 Sum_probs=99.5
Q ss_pred ceeccCCcE-EEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeeeEEEeccc
Q 005864 408 QCIGIGGQA-SVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSFLVYECLE 484 (673)
Q Consensus 408 ~~ig~G~~g-~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 484 (673)
+.+..|..| .||+.... ++..+++|+-... ....+.+|...|+.+. +--+.++++++.+++..++|||+++
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~ 103 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIP 103 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCC
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeC
Confidence 345667666 68998765 4678999985432 2456788999998884 4346788999998899999999999
Q ss_pred CCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCC---------------------------------------
Q 005864 485 RGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF--------------------------------------- 525 (673)
Q Consensus 485 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~--------------------------------------- 525 (673)
|.++.+...... .....++.++++.++.||....
T Consensus 104 G~~~~~~~~~~~-------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (272)
T 4gkh_A 104 GKTAFQVLEEYP-------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV 176 (272)
T ss_dssp SEEHHHHHHHCG-------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred CccccccccCCH-------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence 988877654321 1233466677777777775311
Q ss_pred ----------------CCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 526 ----------------PPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 526 ----------------~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 2378999999999999877777999998863
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=1.4e-06 Score=87.10 Aligned_cols=137 Identities=17% Similarity=0.129 Sum_probs=95.4
Q ss_pred cceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCC---cccceeeeee-cCCeeeEEEec
Q 005864 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR---NIVKFYGFCS-HPRHSFLVYEC 482 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~ 482 (673)
.+.++.|....||+. |+.+++|+... ......+.+|.+++..+++. .+.+++.++. ..+..++||||
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~ 94 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS-----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRK 94 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEEC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC-----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEec
Confidence 456899999999998 67788887432 12356788999999999753 3556677764 45567899999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhc---------------------------------------
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHD--------------------------------------- 523 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~--------------------------------------- 523 (673)
++|.++.+..-. .++...+..++.++++.|+.||+.
T Consensus 95 i~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 95 VQGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CCSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred cCCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 999888763211 123344444555555555555542
Q ss_pred ------------------CCCCeEEecCCCCCeEeCC---CCc-eEEecccceeec
Q 005864 524 ------------------CFPPIVHRDISSKNVLLSS---EYE-ARVSDFGIAKFL 557 (673)
Q Consensus 524 ------------------~~~~ivH~dlk~~Nill~~---~~~-~kl~Dfg~~~~~ 557 (673)
..+.++|+|+++.||++++ ++. +.|+||+.+..-
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2235699999999999997 355 589999988753
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=98.43 E-value=8.3e-08 Score=85.89 Aligned_cols=84 Identities=10% Similarity=0.091 Sum_probs=57.0
Q ss_pred CCCCEEEcccCccccccCccccCCCCCcEEEccCcc-cccccccccCCC----CCccEEEccCCc-cccccccCccccCC
Q 005864 40 MQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNH-LTGNISEVFGIY----PNLTFLDISHNN-FYGEIWSSWGKCQQ 113 (673)
Q Consensus 40 ~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~-i~~~~~~~~~~l----~~L~~L~L~~n~-i~~~~~~~~~~l~~ 113 (673)
.+|+.|||++|.|++.....+.++++|++|+|++|. |+......++.+ ++|++|+|++|. |++.....++.+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 457777777777766666666777777777777773 665555555554 367777777763 76666666677777
Q ss_pred CcEEEcccCc
Q 005864 114 LGTLNFSMNN 123 (673)
Q Consensus 114 L~~L~L~~n~ 123 (673)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777777764
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.42 E-value=1.6e-08 Score=97.80 Aligned_cols=78 Identities=28% Similarity=0.317 Sum_probs=38.2
Q ss_pred cccccEEEccCCcCccC--CchhhhcccCCCeEeecCCcCCCCCcccccCCC--cccEEEecCccccccCc-------cc
Q 005864 207 LLKVHYLNLSNNQFRKE--FPVELEKLVQLSELDLSHNFLGGEIPPQICNLE--SLEKLNVSHNNLSGLIP-------SC 275 (673)
Q Consensus 207 l~~L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~--~L~~L~l~~N~l~~~~~-------~~ 275 (673)
+++|+.|+|++|+|+++ ++..+..+++|+.|+|++|.|.+. ..+..+. +|++|+|++|.+.+..| ..
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~i 246 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAI 246 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHH
Confidence 34444444444444432 223344455555555555555432 1222222 56666666666654333 23
Q ss_pred cccCCCccEEE
Q 005864 276 FEGMHGLSCID 286 (673)
Q Consensus 276 ~~~~~~L~~l~ 286 (673)
+..+|+|+.||
T Consensus 247 l~~~P~L~~LD 257 (267)
T 3rw6_A 247 RERFPKLLRLD 257 (267)
T ss_dssp HHHCTTCCEES
T ss_pred HHHCcccCeEC
Confidence 55667777665
|
| >3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A | Back alignment and structure |
|---|
Probab=98.41 E-value=1.1e-07 Score=92.06 Aligned_cols=80 Identities=30% Similarity=0.374 Sum_probs=49.5
Q ss_pred cCCCCCCEEEeCCCCCCC--cCCccccccccccEEEccCCcCccCCchhhhccc--CCCeEeecCCcCCCCCcc------
Q 005864 181 GSLSELEYLDLSTNKLSG--SIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLV--QLSELDLSHNFLGGEIPP------ 250 (673)
Q Consensus 181 ~~l~~L~~L~l~~n~l~~--~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~ls~N~l~~~~~~------ 250 (673)
.++++|+.|+|++|.|++ .++..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|++.+..|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 346667777777777765 3345556677777777777777654 2333333 677777777777654442
Q ss_pred -cccCCCcccEEE
Q 005864 251 -QICNLESLEKLN 262 (673)
Q Consensus 251 -~~~~l~~L~~L~ 262 (673)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 355667777665
|
| >3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A | Back alignment and structure |
|---|
Probab=98.36 E-value=1.4e-07 Score=84.38 Aligned_cols=84 Identities=11% Similarity=0.077 Sum_probs=53.4
Q ss_pred CCCCEEEeeCCccccCCCccccCCCCCCEEEcccC-ccccccCccccCC----CCCcEEEccCcc-cccccccccCCCCC
Q 005864 16 TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNN-QLFGQIPRSLRNL----ASLNRVHLEQNH-LTGNISEVFGIYPN 89 (673)
Q Consensus 16 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n-~i~~~~~~~l~~l----~~L~~L~L~~n~-i~~~~~~~~~~l~~ 89 (673)
..|++|+|++|.|+......+.++++|+.|+|++| +|++..-..++.+ ++|++|+|++|. |+......+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 45677777777766665666666777777777776 3665555555553 357777777663 66555555666677
Q ss_pred ccEEEccCCc
Q 005864 90 LTFLDISHNN 99 (673)
Q Consensus 90 L~~L~L~~n~ 99 (673)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777777653
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=1.8e-06 Score=88.71 Aligned_cols=84 Identities=5% Similarity=-0.021 Sum_probs=56.3
Q ss_pred ccee-ccCCcEEEEEEEeC-------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-C--CcccceeeeeecC--
Q 005864 407 EQCI-GIGGQASVYRGELP-------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-H--RNIVKFYGFCSHP-- 473 (673)
Q Consensus 407 ~~~i-g~G~~g~vy~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~-- 473 (673)
.+.| +.|....+|+.... +++.+++|+..............+.+|+.+++.++ + ..+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 89999999998764 26789999865432000000134667888888884 3 3567788887655
Q ss_pred -CeeeEEEecccCCChHH
Q 005864 474 -RHSFLVYECLERGSLAE 490 (673)
Q Consensus 474 -~~~~lv~e~~~~gsL~~ 490 (673)
+..++||||++|.++.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 35689999999877653
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=1.6e-05 Score=82.91 Aligned_cols=78 Identities=17% Similarity=0.037 Sum_probs=49.4
Q ss_pred cceeccCCcEEEEEEEeC-CCCEEEEEeeccchh--hh--hHHHHHHHHHHHHHhccCC--Ccc-cceeeeeecCCeeeE
Q 005864 407 EQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLL--SE--ISVQREFLNEIKALTEIRH--RNI-VKFYGFCSHPRHSFL 478 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~--~~--~~~~~~~~~e~~~l~~l~h--~ni-v~l~~~~~~~~~~~l 478 (673)
.+.+|.|.++.||++... +++.|+||....... .. ......+..|.+++..+.. |.. .+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 467999999999999764 478899998653221 00 0113456678888887742 443 455544 3445689
Q ss_pred EEecccCC
Q 005864 479 VYECLERG 486 (673)
Q Consensus 479 v~e~~~~g 486 (673)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999874
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=97.94 E-value=4.3e-05 Score=76.04 Aligned_cols=138 Identities=17% Similarity=0.181 Sum_probs=92.5
Q ss_pred cceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC---CCcccceeeeeecCCeeeEEEecc
Q 005864 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR---HRNIVKFYGFCSHPRHSFLVYECL 483 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~ 483 (673)
.+.|+.|....+|+... ++..+++|+.... ....+..|.+.|+.+. ...+.++++++...+..++||||+
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l 113 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEAL 113 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEec
Confidence 46699999999999987 5778889986532 2456888999998884 367888999988888899999999
Q ss_pred cCCChHH-----------HHhcCCCCc-------------------cchHHHHH---HHHH----------------HHH
Q 005864 484 ERGSLAE-----------ILSNDGSIK-------------------EFSWIVRT---NVIK----------------SVA 514 (673)
Q Consensus 484 ~~gsL~~-----------~l~~~~~~~-------------------~l~~~~~~---~i~~----------------~i~ 514 (673)
++..+.. .++...... .-+|.... ++.. .+.
T Consensus 114 ~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~ 193 (312)
T 3jr1_A 114 NKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIV 193 (312)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHH
T ss_pred cCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHH
Confidence 9986521 123221100 11344321 1111 111
Q ss_pred H-HHHHHhh-cCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 515 N-ALSYMHH-DCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 515 ~-~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
. ....|.. ...+.++|+|+.+.|++++.++ +.|.|++
T Consensus 194 ~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 194 QIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1 1223432 2246899999999999999887 8899974
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.91 E-value=3.1e-05 Score=78.87 Aligned_cols=141 Identities=21% Similarity=0.262 Sum_probs=78.7
Q ss_pred ceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCC--Ccccceee------eeecCCeeeEE
Q 005864 408 QCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH--RNIVKFYG------FCSHPRHSFLV 479 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~------~~~~~~~~~lv 479 (673)
+.++.|..+.||+....+| .+++|+..... ..+..|..++..+.. -.+.+++. +....+..+++
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~~-------~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l 109 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRPE-------KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVV 109 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSCH-------HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCCH-------HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEE
Confidence 4466678999999987555 58999886521 222334444444421 12333332 12345678899
Q ss_pred EecccCCChH--------------HHHhcCC-----CC------ccchHHHH----------------------------
Q 005864 480 YECLERGSLA--------------EILSNDG-----SI------KEFSWIVR---------------------------- 506 (673)
Q Consensus 480 ~e~~~~gsL~--------------~~l~~~~-----~~------~~l~~~~~---------------------------- 506 (673)
+||++|.++. ..++... .. ....|...
T Consensus 110 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 189 (346)
T 2q83_A 110 YDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYL 189 (346)
T ss_dssp EECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred EEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHH
Confidence 9999986542 1111110 00 00122110
Q ss_pred ---HHHHHHHHHHHHHHhh----------cCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 507 ---TNVIKSVANALSYMHH----------DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 507 ---~~i~~~i~~~l~~LH~----------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
..+...+..++++|++ ...+.++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 190 QEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 0111224446666763 1234899999999999998888999999998853
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.89 E-value=4.4e-06 Score=76.21 Aligned_cols=66 Identities=15% Similarity=0.250 Sum_probs=31.5
Q ss_pred cCCCCCCEEEcccC-ccccc----cCccccCCCCCcEEEccCccccccc----ccccCCCCCccEEEccCCcccc
Q 005864 37 GNLMQLTNLEIDNN-QLFGQ----IPRSLRNLASLNRVHLEQNHLTGNI----SEVFGIYPNLTFLDISHNNFYG 102 (673)
Q Consensus 37 ~~l~~L~~L~L~~n-~i~~~----~~~~l~~l~~L~~L~L~~n~i~~~~----~~~~~~l~~L~~L~L~~n~i~~ 102 (673)
.+-+.|+.|+|++| +|.+. +.+++..-+.|+.|+|++|+|+... .+++...+.|++|+|++|.|+.
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 33445555555553 44421 2234444455555555555555222 2233344555555555555543
|
| >1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1 | Back alignment and structure |
|---|
Probab=97.85 E-value=3.8e-06 Score=76.61 Aligned_cols=119 Identities=10% Similarity=0.064 Sum_probs=62.5
Q ss_pred cccCCCCCcEEEccCc-ccccc----cccccCCCCCccEEEccCCccccccccCcc----ccCCCcEEEcccCccCccCC
Q 005864 59 SLRNLASLNRVHLEQN-HLTGN----ISEVFGIYPNLTFLDISHNNFYGEIWSSWG----KCQQLGTLNFSMNNITGSIP 129 (673)
Q Consensus 59 ~l~~l~~L~~L~L~~n-~i~~~----~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~----~l~~L~~L~L~~n~l~~~~~ 129 (673)
.+.+-+.|++|+|++| +|+.. ..+++...+.|+.|+|++|.|......+++ .-+.|++|+|+.|.|+....
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3344556666666664 55532 234455556666666666666544443333 22445555555555443211
Q ss_pred hhhhccccccccccccccccccCCccccCCCCCCEEEccCc---cccc----cCCccccCCCCCCEEEeCCCCCC
Q 005864 130 PEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGN---KLSG----NLPRVLGSLSELEYLDLSTNKLS 197 (673)
Q Consensus 130 ~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n---~l~~----~~~~~l~~l~~L~~L~l~~n~l~ 197 (673)
. .+...+..-+.|++|+|++| .+.. .+.+.+..-+.|+.|+++.|.+.
T Consensus 116 ~--------------------ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 116 A--------------------RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp H--------------------HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred H--------------------HHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 1 12233444566777777654 3332 23345566677888887766543
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=97.81 E-value=5.4e-05 Score=74.87 Aligned_cols=79 Identities=19% Similarity=0.176 Sum_probs=56.2
Q ss_pred CCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCC---cccceeeeeecCCeeeEE
Q 005864 403 NFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR---NIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv 479 (673)
....++.+|.|..+.||+.+..+|+.|++|+....... ....|..|+..|+.+.-. -+.+++++. ..++|
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~---~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv 88 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPA---LDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLA 88 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC---CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc---hhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEE
Confidence 45556789999999999999999999999986543211 234577899999888421 244455442 34789
Q ss_pred EecccCCCh
Q 005864 480 YECLERGSL 488 (673)
Q Consensus 480 ~e~~~~gsL 488 (673)
|||++++..
T Consensus 89 ~e~l~~~~~ 97 (288)
T 3f7w_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEeecccCC
Confidence 999987653
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00015 Score=75.97 Aligned_cols=76 Identities=13% Similarity=0.165 Sum_probs=46.8
Q ss_pred CCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCceeccc--ccccccccccccC---CcCcchhHHHHHHHHHHH
Q 005864 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAG--TFGYVAPELAYTM---KVTEKCDVYSFGVLALEV 600 (673)
Q Consensus 526 ~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~--~~~y~aPE~~~~~---~~~~~~Dv~slG~il~el 600 (673)
+.++|+|+++.||++++++ ++++||+.+..-.+.... ..... ...|++|+..... ......++.+....+|+.
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dl-a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDI-GAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNL 309 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHH-HHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHH-HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 4899999999999999876 999999998753221110 11111 1346666654311 112234555777777777
Q ss_pred HhC
Q 005864 601 IKG 603 (673)
Q Consensus 601 ~~g 603 (673)
+++
T Consensus 310 y~~ 312 (420)
T 2pyw_A 310 FNK 312 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 664
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00056 Score=67.95 Aligned_cols=71 Identities=13% Similarity=0.002 Sum_probs=44.6
Q ss_pred cceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcc-cceeeeeecCCeeeEEEecc-c
Q 005864 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNI-VKFYGFCSHPRHSFLVYECL-E 484 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~ 484 (673)
.+.|+.|....+|+. +.+++|+....... .....+|+.+++.+....+ .++++++ ++.-++++||+ +
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~----~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~ 91 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE----YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAG 91 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC--------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTT
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc----eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCC
Confidence 678999999999999 56888987543111 1112457777777642223 4555543 33457899999 6
Q ss_pred CCCh
Q 005864 485 RGSL 488 (673)
Q Consensus 485 ~gsL 488 (673)
+.++
T Consensus 92 g~~l 95 (301)
T 3dxq_A 92 AQTM 95 (301)
T ss_dssp CEEC
T ss_pred CccC
Confidence 5444
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00048 Score=69.20 Aligned_cols=159 Identities=12% Similarity=0.117 Sum_probs=88.9
Q ss_pred ccHHHHHHHhcCCCcc-----ceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCc--cc
Q 005864 392 IVYEEIIRATKNFDAE-----QCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN--IV 464 (673)
Q Consensus 392 ~~~~~~~~~~~~~~~~-----~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv 464 (673)
++.+++......|... +.|+.|....+|+....+| .+++|...... ....+..|+.++..++... +.
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~-----~~~~l~~e~~~l~~L~~~g~~vP 80 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV-----EKNDLPFFLGLMQHLAAKGLSCP 80 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC-----CHHHHHHHHHHHHHHHHCCCCCC
Confidence 4556666666667653 3467788899999987655 68899876521 1223445677766663212 23
Q ss_pred ceeee------eecCCeeeEEEecccCCChHH--------------HHhcC----C-C----CccchHHHHHH-------
Q 005864 465 KFYGF------CSHPRHSFLVYECLERGSLAE--------------ILSND----G-S----IKEFSWIVRTN------- 508 (673)
Q Consensus 465 ~l~~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~----~-~----~~~l~~~~~~~------- 508 (673)
+++.. ....+..+++++|++|..+.. .++.. . . .....|.....
T Consensus 81 ~~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 160 (322)
T 2ppq_A 81 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 160 (322)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred cccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHH
Confidence 33321 122356789999999865321 11111 0 0 01112332111
Q ss_pred -----HHHHHHHHHHHHhhc----CCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 509 -----VIKSVANALSYMHHD----CFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 509 -----i~~~i~~~l~~LH~~----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
+...+.+.++++++. ...+++|+|+.+.||+++++..+.|+||+.+..
T Consensus 161 ~~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 161 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 011244455555532 124789999999999999876568999998763
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00067 Score=68.51 Aligned_cols=142 Identities=17% Similarity=0.142 Sum_probs=73.5
Q ss_pred ceeccCCcEE-EEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-C-CcccceeeeeecCCeeeEEEeccc
Q 005864 408 QCIGIGGQAS-VYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-H-RNIVKFYGFCSHPRHSFLVYECLE 484 (673)
Q Consensus 408 ~~ig~G~~g~-vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h-~niv~l~~~~~~~~~~~lv~e~~~ 484 (673)
+.++.|.... +|+....+|+.+++|....... ..+..|+.++..+. + -.+.+++.+....+ +++||++.
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~------~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~ 95 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG------GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLG 95 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT------CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC------ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCC
Confidence 4566665555 6687765577788876543210 22334566666663 2 23556676644333 68999998
Q ss_pred CCChHHHHhcCC---------------------C--CccchHHHHH-------H-------------HHHHHHHHHHHHh
Q 005864 485 RGSLAEILSNDG---------------------S--IKEFSWIVRT-------N-------------VIKSVANALSYMH 521 (673)
Q Consensus 485 ~gsL~~~l~~~~---------------------~--~~~l~~~~~~-------~-------------i~~~i~~~l~~LH 521 (673)
+.++.+++.... . ...++..... . ....+.+.++.+.
T Consensus 96 ~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~ 175 (333)
T 3csv_A 96 DALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQIL 175 (333)
T ss_dssp SCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred CcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence 777655443210 0 0111110000 0 0001112222221
Q ss_pred h---cCCCCeEEecCCCCCeEeCCC----CceEEecccceeec
Q 005864 522 H---DCFPPIVHRDISSKNVLLSSE----YEARVSDFGIAKFL 557 (673)
Q Consensus 522 ~---~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~~~~~ 557 (673)
+ ...+.++|||+.+.||+++.+ +.+.|+||+.+..-
T Consensus 176 ~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 176 SAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp HHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred HhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1 122478999999999999875 67999999998754
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0022 Score=64.46 Aligned_cols=158 Identities=12% Similarity=0.117 Sum_probs=87.4
Q ss_pred ccHHHHHHHhcCCCc-----cceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCC--ccc
Q 005864 392 IVYEEIIRATKNFDA-----EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR--NIV 464 (673)
Q Consensus 392 ~~~~~~~~~~~~~~~-----~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv 464 (673)
++.+++......|.+ ...++ |....||+....+|+.+++|....... ....+..|..++..++.. .+.
T Consensus 11 l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~----~~~~~~~E~~~~~~L~~~g~~vp 85 (328)
T 1zyl_A 11 LHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW----TADQILEEHQFALQLVNDEVPVA 85 (328)
T ss_dssp CCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS----CHHHHHHHHHHHHHHHHTTCSBC
T ss_pred CCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC----CHHHHHHHHHHHHHHHHcCCeec
Confidence 344555544444432 34576 888999999877788899999863211 133455677777776421 234
Q ss_pred ceeee-----eecCCeeeEEEecccCCChH----HH----------Hhc----CC--CCccchHHHH----HHH------
Q 005864 465 KFYGF-----CSHPRHSFLVYECLERGSLA----EI----------LSN----DG--SIKEFSWIVR----TNV------ 509 (673)
Q Consensus 465 ~l~~~-----~~~~~~~~lv~e~~~~gsL~----~~----------l~~----~~--~~~~l~~~~~----~~i------ 509 (673)
+++.. ...++..++++||++|.++. +. ++. .. .....++... ..+
T Consensus 86 ~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (328)
T 1zyl_A 86 APVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATL 165 (328)
T ss_dssp CCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSS
T ss_pred ceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCc
Confidence 44443 12245567899999885432 00 111 00 0011121110 000
Q ss_pred ---------HHHHHHHHHHHhhc----CCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 510 ---------IKSVANALSYMHHD----CFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 510 ---------~~~i~~~l~~LH~~----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
...+.+.++.+... ....++|+|+++.||+++ + .+.++||+.+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 166 IPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 11111223333221 223678999999999999 5 899999998764
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00074 Score=70.60 Aligned_cols=73 Identities=16% Similarity=0.138 Sum_probs=49.7
Q ss_pred cceeccCCcEEEEEEEeCC--------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeee
Q 005864 407 EQCIGIGGQASVYRGELPS--------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~ 477 (673)
.+.|+.|....+|++..++ ++.+++|+..... . ...+.+|..++..+. +.-..++++.+.. .
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~-~----~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g 148 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-T----ESHLVAESVIFTLLSERHLGPKLYGIFSG----G 148 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-C----HHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC-c----HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----C
Confidence 3568899999999998753 5789999874321 1 134457888888884 3334567776542 3
Q ss_pred EEEecccCCCh
Q 005864 478 LVYECLERGSL 488 (673)
Q Consensus 478 lv~e~~~~gsL 488 (673)
+|+||++|.++
T Consensus 149 ~v~e~l~G~~l 159 (429)
T 1nw1_A 149 RLEEYIPSRPL 159 (429)
T ss_dssp EEECCCCEEEC
T ss_pred EEEEEeCCccc
Confidence 89999987443
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0015 Score=59.75 Aligned_cols=103 Identities=19% Similarity=0.128 Sum_probs=66.7
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCce
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT 565 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 565 (673)
-||.++|...+ .++++.++|.++.|.+.+|.-.-.... + ..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~~--~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 33 LSLEEILRLYN--QPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHHcC--CCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc----------
Confidence 38999998765 679999999999999999887622111 1 1222346888999998887763 1110
Q ss_pred ecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCC
Q 005864 566 EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP 606 (673)
Q Consensus 566 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p 606 (673)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123466888753 3557788999999999999854443
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0015 Score=66.68 Aligned_cols=142 Identities=16% Similarity=0.185 Sum_probs=84.2
Q ss_pred cceeccCCcEEEEEEEeC--------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeee
Q 005864 407 EQCIGIGGQASVYRGELP--------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~ 477 (673)
.+.+..|-...+|+...+ +++.|++|+..... .......+|..+++.+. +.-..++++++.+ .
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~----~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g 126 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL----QGVDSLVLESVMFAILAERSLGPQLYGVFPE----G 126 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----E
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc----chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----c
Confidence 356888999999999875 35789999863311 12345568888888884 3334667766643 2
Q ss_pred EEEecccCCChHHH-----------------HhcCCC--Cccc--hHHHHHHHHHHHHH-------------------HH
Q 005864 478 LVYECLERGSLAEI-----------------LSNDGS--IKEF--SWIVRTNVIKSVAN-------------------AL 517 (673)
Q Consensus 478 lv~e~~~~gsL~~~-----------------l~~~~~--~~~l--~~~~~~~i~~~i~~-------------------~l 517 (673)
+|+||++|.++..- ++.... .... -|.+..++..++.. .+
T Consensus 127 ~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~ 206 (379)
T 3feg_A 127 RLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEM 206 (379)
T ss_dssp EEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHH
T ss_pred cEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHH
Confidence 89999998655311 121110 1111 34555555544322 12
Q ss_pred HH----Hhhc-CCCCeEEecCCCCCeEeCCC----CceEEecccceee
Q 005864 518 SY----MHHD-CFPPIVHRDISSKNVLLSSE----YEARVSDFGIAKF 556 (673)
Q Consensus 518 ~~----LH~~-~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~~~~ 556 (673)
.. |... ....++|+|+.+.||+++++ +.+.++||..+..
T Consensus 207 ~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 207 GNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 22 3221 12367899999999999876 6899999998864
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00078 Score=57.25 Aligned_cols=59 Identities=19% Similarity=0.218 Sum_probs=41.6
Q ss_pred eEeecCCcCC-CCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCC
Q 005864 236 ELDLSHNFLG-GEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLI 296 (673)
Q Consensus 236 ~L~ls~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~ 296 (673)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+.+.+..|..+++|+.|+|++|++.+..
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC 71 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDC 71 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSG
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccC
Confidence 5666676665 24443322 35788888888888777778888888888888888877644
|
| >3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0017 Score=55.14 Aligned_cols=55 Identities=16% Similarity=0.268 Sum_probs=27.8
Q ss_pred EEEcccCccc-cccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCcc
Q 005864 44 NLEIDNNQLF-GQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNF 100 (673)
Q Consensus 44 ~L~L~~n~i~-~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i 100 (673)
.++.++++++ ..+|..+. ++|++|+|++|+|+.+....|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4555555553 12332211 2455555555555555555555555555555555544
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0056 Score=64.21 Aligned_cols=74 Identities=18% Similarity=0.044 Sum_probs=47.6
Q ss_pred cceeccCCcEEEEEEEeCC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcc-cceeeeeecCCeeeEEEeccc
Q 005864 407 EQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNI-VKFYGFCSHPRHSFLVYECLE 484 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~ 484 (673)
.+.|+.|-...+|+....+ +..+++|+....... .-...+|..++..+...++ .++++++. + ..|+||++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~----~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~ 184 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE----IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMD 184 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS----CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh----hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeC
Confidence 3568899999999998765 578899987432111 1112478888888854444 56777763 2 25999998
Q ss_pred CCCh
Q 005864 485 RGSL 488 (673)
Q Consensus 485 ~gsL 488 (673)
|.++
T Consensus 185 G~~l 188 (458)
T 2qg7_A 185 GYAL 188 (458)
T ss_dssp SEEC
T ss_pred CccC
Confidence 7544
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0021 Score=65.93 Aligned_cols=74 Identities=11% Similarity=0.041 Sum_probs=44.2
Q ss_pred cceeccCCcEEEEEEEeCC---------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCc-ccceeeeeecCCee
Q 005864 407 EQCIGIGGQASVYRGELPS---------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN-IVKFYGFCSHPRHS 476 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~ 476 (673)
.+.++.|....+|+....+ ++.+++|+....... ......|..++..+.... +.++++.. + -
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~----~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~ 109 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE----LYNTISEFEVYKTMSKYKIAPQLLNTF--N--G 109 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG----TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--T
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc----eecHHHHHHHHHHHHhcCCCCceEEec--C--C
Confidence 3567889999999997754 268889987543111 112356777777774333 44666554 2 3
Q ss_pred eEEEecccCCCh
Q 005864 477 FLVYECLERGSL 488 (673)
Q Consensus 477 ~lv~e~~~~gsL 488 (673)
++|+||++|.++
T Consensus 110 ~~v~e~i~G~~l 121 (369)
T 3c5i_A 110 GRIEEWLYGDPL 121 (369)
T ss_dssp EEEEECCCSEEC
T ss_pred cEEEEEecCCcC
Confidence 689999987543
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=96.15 E-value=0.04 Score=55.37 Aligned_cols=32 Identities=25% Similarity=0.332 Sum_probs=28.2
Q ss_pred CCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 526 PPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 526 ~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
..++|+|+.+.||++++++.+.++||+.+..-
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 47899999999999998888999999887653
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=95.00 E-value=0.07 Score=55.14 Aligned_cols=141 Identities=9% Similarity=0.044 Sum_probs=83.9
Q ss_pred cceeccCCcEEEEEEEeCC--------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeee
Q 005864 407 EQCIGIGGQASVYRGELPS--------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~ 477 (673)
.+.+..|-...+|+...++ ++.|++|+....... .-...+|..+++.+. +.-..++++.+. -+
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~----~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~ 146 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK----FYDSKVELDVFRYLSNINIAPNIIADFP----EG 146 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C----CCCHHHHHHHHHHHHHTTSSCCEEEEET----TE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch----hcCHHHHHHHHHHHHhcCCCCCEEEEcC----CC
Confidence 3568889999999998753 688999986442111 112246777777774 333455665432 36
Q ss_pred EEEecccCCChHH-------H----------HhcC-------C---CCccchHHHHHHHHHHH-----------------
Q 005864 478 LVYECLERGSLAE-------I----------LSND-------G---SIKEFSWIVRTNVIKSV----------------- 513 (673)
Q Consensus 478 lv~e~~~~gsL~~-------~----------l~~~-------~---~~~~l~~~~~~~i~~~i----------------- 513 (673)
.|+||++|.++.. . ++.. . ...+--|.+..++..++
T Consensus 147 ~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 226 (424)
T 3mes_A 147 RIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYS 226 (424)
T ss_dssp EEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHH
T ss_pred EEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHH
Confidence 8999999865421 0 0110 0 11111344444443322
Q ss_pred --HHHHHHHhh---------------------cCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 514 --ANALSYMHH---------------------DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 514 --~~~l~~LH~---------------------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
...+.+|.+ .....++|+|+.+.||+ ++++.+.++||..+..
T Consensus 227 ~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 227 KILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 122233321 11236789999999999 7788999999999874
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=94.34 E-value=0.13 Score=53.03 Aligned_cols=30 Identities=27% Similarity=0.445 Sum_probs=25.2
Q ss_pred CeEEecCCCCCeEe------CCCCceEEecccceee
Q 005864 527 PIVHRDISSKNVLL------SSEYEARVSDFGIAKF 556 (673)
Q Consensus 527 ~ivH~dlk~~Nill------~~~~~~kl~Dfg~~~~ 556 (673)
.++|+|+.+.||++ +++..++++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4456799999999874
|
| >4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=92.03 E-value=0.44 Score=43.47 Aligned_cols=116 Identities=10% Similarity=0.107 Sum_probs=81.7
Q ss_pred CCCcccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCe
Q 005864 459 RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNV 538 (673)
Q Consensus 459 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Ni 538 (673)
.||+.++. .+-.+++.+.+.|+.-+ +..++-. ....+...+++++.+|+....+++.. +|--+.|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~----ik~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDN----IKSFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGG----GGGSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHH----HHhcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceE
Confidence 58888876 45556666666665433 2222221 13467788999999999998777766 8999999999
Q ss_pred EeCCCCceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCc
Q 005864 539 LLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD 608 (673)
Q Consensus 539 ll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 608 (673)
+++.++.+++.=.|+-..+ +|. ..+...=.-.+=+++..+++++..|+
T Consensus 111 ~f~~~~~p~i~~RGik~~l-----------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVV-----------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EECTTSCEEESCCEETTTB-----------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEcCCCCEEEEEccCccCC-----------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999877654322 222 22333445577889999999999986
|
| >4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid} | Back alignment and structure |
|---|
Probab=90.34 E-value=1.3 Score=40.45 Aligned_cols=115 Identities=9% Similarity=0.046 Sum_probs=80.1
Q ss_pred CCCcccceeeeeecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHH-HHhhcCCCCeEEecCCCCC
Q 005864 459 RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALS-YMHHDCFPPIVHRDISSKN 537 (673)
Q Consensus 459 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~-~LH~~~~~~ivH~dlk~~N 537 (673)
.||++ -...-.+++...+.++.-+++.=...++ ..+...+++++.+|+.... +++.. +|--+.|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~------~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR------KTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH------TSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH------hcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCce
Confidence 57877 4445566777777777554432222332 3677889999999998888 77765 889999999
Q ss_pred eEeCCCCceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCc
Q 005864 538 VLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRD 608 (673)
Q Consensus 538 ill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 608 (673)
++++.++.+++.-.|+-.. ++|.. .+..-=.-.+=+++..++.++..|+
T Consensus 115 L~f~~~~~p~i~hRGi~~~-----------------lpP~e-----~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVKES-----------------LPPDE-----WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EEECTTCCEEESCCEETTT-----------------BSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEEeCCCcEEEEEcCCccc-----------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999987775432 23331 2222334567788888999888876
|
| >2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A | Back alignment and structure |
|---|
Probab=86.74 E-value=0.26 Score=31.78 Aligned_cols=24 Identities=13% Similarity=0.246 Sum_probs=10.8
Q ss_pred eehhhhhHHHHHHHHHhhhheeec
Q 005864 343 IIIPILGVFALLFFVIGIIFGRTK 366 (673)
Q Consensus 343 i~~~~~~~~~~l~~~~~~~~~~~k 366 (673)
+++.++|+++++++++.++++.+|
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RR 37 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKR 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhheeh
Confidence 455566644444444443333333
|
| >2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus} | Back alignment and structure |
|---|
Probab=84.16 E-value=2 Score=33.87 Aligned_cols=46 Identities=9% Similarity=0.080 Sum_probs=22.5
Q ss_pred ccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccC
Q 005864 27 SLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQ 73 (673)
Q Consensus 27 ~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~ 73 (673)
.++.+....|.++++|+.+.|-.+ ++.+...+|.+|.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344444455555555555555543 3334444555555555555544
|
| >2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.04 E-value=0.43 Score=30.91 Aligned_cols=25 Identities=28% Similarity=0.454 Sum_probs=10.6
Q ss_pred eehhhhh-HHHHHHHHHhhhheeecc
Q 005864 343 IIIPILG-VFALLFFVIGIIFGRTKR 367 (673)
Q Consensus 343 i~~~~~~-~~~~l~~~~~~~~~~~k~ 367 (673)
|++.+++ +++++++++.++++.+++
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RRr 38 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRRR 38 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhhh
Confidence 4444444 444444444444433333
|
| >2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.61 E-value=0.46 Score=30.71 Aligned_cols=25 Identities=16% Similarity=0.349 Sum_probs=10.3
Q ss_pred eehhhhh-HHHHHHHHHhhhheeecc
Q 005864 343 IIIPILG-VFALLFFVIGIIFGRTKR 367 (673)
Q Consensus 343 i~~~~~~-~~~~l~~~~~~~~~~~k~ 367 (673)
|++.+++ +++++++++.++++.+++
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRR 37 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRK 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhh
Confidence 4444444 444444444444433333
|
| >3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A | Back alignment and structure |
|---|
Probab=82.14 E-value=0.17 Score=52.97 Aligned_cols=62 Identities=8% Similarity=-0.066 Sum_probs=17.8
Q ss_pred ccceeccCCcEEEEEEEeCC-CCEEEE------EeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeee
Q 005864 406 AEQCIGIGGQASVYRGELPS-GEVVAV------KKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCS 471 (673)
Q Consensus 406 ~~~~ig~G~~g~vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 471 (673)
+.+.+| ||.||+|.+.. ..+||| |..+.... ..+....+.+|..++...+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~-~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGV-SEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccc-cccccccccccccccccccccccCCCcceEE
Confidence 445666 99999998754 367888 66554322 2233457888999999999999999988764
|
| >2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus} | Back alignment and structure |
|---|
Probab=80.38 E-value=3.2 Score=32.72 Aligned_cols=46 Identities=11% Similarity=0.098 Sum_probs=25.9
Q ss_pred ccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccC
Q 005864 51 QLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISH 97 (673)
Q Consensus 51 ~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 97 (673)
.++.+...+|.++++|+.+.|-.+ ++.+...+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344444556666666666666543 4445555666666666665554
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 673 | ||||
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 2e-60 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 2e-57 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 3e-57 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 7e-56 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 2e-55 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 3e-55 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 6e-54 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 2e-53 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 3e-52 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 6e-52 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 9e-52 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 3e-51 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 9e-51 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 1e-50 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 2e-50 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 2e-50 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 3e-50 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 7e-50 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 8e-50 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 1e-49 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 3e-49 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 1e-48 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 2e-48 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 3e-47 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 3e-47 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 3e-46 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 3e-46 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 6e-46 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 4e-45 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 4e-45 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 8e-45 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 3e-44 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 1e-43 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 2e-43 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 5e-43 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 7e-43 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 9e-43 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 4e-42 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 2e-41 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 4e-41 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 9e-41 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-40 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 3e-39 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 9e-39 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 1e-38 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 1e-38 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 5e-38 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 7e-38 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-37 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 3e-37 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 6e-37 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 3e-36 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 3e-35 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 5e-35 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 2e-33 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 3e-33 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 4e-33 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 3e-30 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 7e-30 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 1e-28 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 3e-28 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 8e-27 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-19 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 6e-17 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-16 | |
| d1xkua_ | 305 | c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 99 | 1e-09 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 2e-22 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 2e-22 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 5e-22 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 9e-15 | |
| d1ozna_ | 284 | c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 recept | 7e-11 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 2e-22 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-21 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 6e-12 | |
| d2omza2 | 384 | c.10.2.1 (A:33-416) Internalin A {Listeria monocyt | 3e-04 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 9e-19 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 4e-18 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 5e-18 | |
| d1ogqa_ | 313 | c.10.2.8 (A:) Polygalacturonase inhibiting protein | 2e-17 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 5e-12 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 8e-10 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-09 | |
| d1p9ag_ | 266 | c.10.2.7 (G:) von Willebrand factor binding domain | 2e-07 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 4e-11 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 4e-08 | |
| d1h6ua2 | 227 | c.10.2.1 (A:36-262) Internalin H {Listeria monocyt | 3e-06 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 1e-10 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 1e-09 | |
| d2astb2 | 284 | c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p1 | 3e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-09 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 7e-09 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 7e-08 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 7e-07 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 7e-06 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 1e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 2e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 3e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 4e-05 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 5e-04 | |
| d1z7xw1 | 460 | c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human ( | 0.002 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 7e-09 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 7e-08 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 6e-07 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-06 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 2e-05 | |
| d1jl5a_ | 353 | c.10.2.6 (A:) Leucine rich effector protein YopM { | 0.001 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 1e-08 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 5e-06 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 2e-05 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 6e-04 | |
| d1h6ta2 | 210 | c.10.2.1 (A:31-240) Internalin B {Listeria monocyt | 7e-04 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 2e-08 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 2e-07 | |
| d1dcea3 | 124 | c.10.2.2 (A:444-567) Rab geranylgeranyltransferase | 0.001 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 5e-08 | |
| d1w8aa_ | 192 | c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanoga | 8e-05 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 5e-08 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 1e-04 | |
| d1xwdc1 | 242 | c.10.2.7 (C:18-259) Follicle-stimulating hormone r | 2e-04 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 1e-07 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 9e-07 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 3e-06 | |
| d1koha1 | 162 | c.10.2.3 (A:201-362) mRNA export factor tap {Human | 2e-04 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 8e-07 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 4e-04 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.001 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.001 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.002 | |
| d2ca6a1 | 344 | c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal dom | 0.003 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 2e-06 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 2e-05 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 3e-04 | |
| d1a9na_ | 162 | c.10.2.4 (A:) Splicesomal U2A' protein {Human (Hom | 0.003 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 2e-05 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 8e-05 | |
| d2omxa2 | 199 | c.10.2.1 (A:37-235) Internalin B {Listeria monocyt | 4e-04 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 2e-05 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 5e-05 | |
| d2ifga3 | 156 | c.10.2.7 (A:36-191) High affinity nerve growth fac | 1e-04 | |
| d1m9la_ | 198 | c.10.3.1 (A:) Outer arm dynein light chain 1 {Gree | 0.001 |
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 201 bits (513), Expect = 2e-60
Identities = 69/281 (24%), Positives = 124/281 (44%), Gaps = 22/281 (7%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKAL 455
EI Q IG G +VY+G+ VAVK + + +Q F NE+ L
Sbjct: 4 EIPD--GQITVGQRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQA-FKNEVGVL 58
Query: 456 TEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVAN 515
+ RH NI+ F G+ + P+ +V + E SL L +F I ++ + A
Sbjct: 59 RKTRHVNILLFMGYSTAPQL-AIVTQWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQ 115
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP--GSSNWTEFAGTFGY 573
+ Y+H I+HRD+ S N+ L + ++ DFG+A GS + + +G+ +
Sbjct: 116 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 574 VAPELAYTMK---VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP 630
+APE+ + + DVY+FG++ E++ G+ P S +++ + + L P
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP---YSNINNRDQIIFMVGRGYLSP 229
Query: 631 RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
L N + ++ CL++ + RP + +
Sbjct: 230 DLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASI 267
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 193 bits (491), Expect = 2e-57
Identities = 60/273 (21%), Positives = 114/273 (41%), Gaps = 18/273 (6%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
+++ IG G + G+++ K+ ++E Q ++E+ L E++H
Sbjct: 5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQM-LVSEVNLLRELKHP 63
Query: 462 NIVKFYGFCSHPRHS--FLVYECLERGSLAEILSNDGSIKE-FSWIVRTNVIKSVANALS 518
NIV++Y ++ ++V E E G LA +++ ++ V+ + AL
Sbjct: 64 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 123
Query: 519 YMH--HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAP 576
H D ++HRD+ NV L + ++ DFG+A+ L +S F GT Y++P
Sbjct: 124 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSP 183
Query: 577 ELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636
E M EK D++S G L E+ P + + +I + +
Sbjct: 184 EQMNRMSYNEKSDIWSLGCLLYELCALMPPFT--------AFSQKELAGKIREGKFRRIP 235
Query: 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
D+L I+ L RP+++ + +
Sbjct: 236 YRYSDELNEIIT---RMLNLKDYHRPSVEEILE 265
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 192 bits (490), Expect = 3e-57
Identities = 61/271 (22%), Positives = 114/271 (42%), Gaps = 20/271 (7%)
Query: 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
+ + +G G V+ G VAVK +S FL E + +++H+
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSP----DAFLAEANLMKQLQHQ 68
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH 521
+V+ Y + +++ E +E GSL + L IK + ++ +A ++++
Sbjct: 69 RLVRLYAVVTQEPI-YIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIE 126
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW-TEFAGTFGYVAPELAY 580
+HRD+ + N+L+S +++DFG+A+ ++ + APE
Sbjct: 127 ERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAIN 183
Query: 581 TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640
T K DV+SFG+L E++ +N + N R+ P N
Sbjct: 184 YGTFTIKSDVWSFGILLTEIVTHGRIPY------PGMTNPEVIQNLERGYRMVRPD-NCP 236
Query: 641 DKLISILEVALLCLEESPESRPTMQTVCQLL 671
++L ++ LC +E PE RPT + +L
Sbjct: 237 EELYQLM---RLCWKERPEDRPTFDYLRSVL 264
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 189 bits (480), Expect = 7e-56
Identities = 68/269 (25%), Positives = 118/269 (43%), Gaps = 21/269 (7%)
Query: 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
++F+ + +G G +VY S ++A+K L + V+ + E++ + +RH
Sbjct: 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH 65
Query: 461 RNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM 520
NI++ YG+ +L+ E G++ L F I +ANALSY
Sbjct: 66 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALSYC 122
Query: 521 HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAY 580
H ++HRDI +N+LL S E +++DFG + SS T GT Y+ PE+
Sbjct: 123 HS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP--SSRRTTLCGTLDYLPPEMIE 177
Query: 581 TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640
EK D++S GVL E + GK P + ++ + I P +
Sbjct: 178 GRMHDEKVDLWSLGVLCYEFLVGKPPFE--------ANTYQETYKRISRVEFTFPD-FVT 228
Query: 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669
+ ++ L+ +P RP ++ V +
Sbjct: 229 EGARDLIS---RLLKHNPSQRPMLREVLE 254
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 187 bits (477), Expect = 2e-55
Identities = 59/271 (21%), Positives = 110/271 (40%), Gaps = 20/271 (7%)
Query: 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
Q IG G V+ G + + VA+K +SE +F+ E + + ++ H
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSE----EDFIEEAEVMMKLSHP 60
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH 521
+V+ YG C LV+E +E G L++ L + F+ + V +
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL--FAAETLLGMCLDVCEGM---A 115
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE-FAGTFGYVAPELAY 580
+ ++HRD++++N L+ +VSDFG+ +F+ + + +PE+
Sbjct: 116 YLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS 175
Query: 581 TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640
+ + K DV+SFGVL EV + + + + +I R
Sbjct: 176 FSRYSSKSDVWSFGVLMWEVFSEGKI-------PYENRSNSEVVEDISTGFRLYKPRLAS 228
Query: 641 DKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ ++ C +E PE RP + + L
Sbjct: 229 THVY---QIMNHCWKERPEDRPAFSRLLRQL 256
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 189 bits (481), Expect = 3e-55
Identities = 64/300 (21%), Positives = 122/300 (40%), Gaps = 42/300 (14%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
+F+ +G G V++ PSG V+A K H L + +++ + + E++ L E
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIH--LEIKPAIRNQIIRELQVLHECNSP 64
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH 521
IV FYG + E ++ GSL ++L G + V +V L+Y+
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLR 121
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT 581
I+HRD+ N+L++S E ++ DFG++ L + F GT Y++PE
Sbjct: 122 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPERLQG 177
Query: 582 MKVTEKCDVYSFGVLALEVIKGKHP------------------------------RDFIS 611
+ + D++S G+ +E+ G++P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPL 237
Query: 612 LLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALL--CLEESPESRPTMQTVCQ 669
S +++ E+LD + P + + S+ + CL ++P R ++ +
Sbjct: 238 SSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 184 bits (469), Expect = 6e-54
Identities = 73/297 (24%), Positives = 129/297 (43%), Gaps = 37/297 (12%)
Query: 394 YEEIIRATKNFDAE---------QCIGIGGQASVYRGELPS----GEVVAVKKFHSLLLS 440
+E+ A + F E Q IG G V G L VA+K S
Sbjct: 9 FEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTE 68
Query: 441 EISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKE 500
+ +R+FL+E + + H N++ G + ++ E +E GSL L + +
Sbjct: 69 K--QRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQN--DGQ 124
Query: 501 FSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560
F+ I +++ +A + Y+ VHRD++++N+L++S +VSDFG+++FL+
Sbjct: 125 FTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 181
Query: 561 SSNWTE-----FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLS 614
+S+ T + APE K T DV+S+G++ EV+ G+ P
Sbjct: 182 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYW------ 235
Query: 615 SSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+N ++ D RLP P D ++ ++ L C ++ RP + L
Sbjct: 236 -DMTNQDVINAIEQDYRLPPPM----DCPSALHQLMLDCWQKDRNHRPKFGQIVNTL 287
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 182 bits (462), Expect = 2e-53
Identities = 62/272 (22%), Positives = 114/272 (41%), Gaps = 22/272 (8%)
Query: 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
K+ + +G G V G+ VA+K +SE EF+ E K + + H
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSE----DEFIEEAKVMMNLSHE 59
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH 521
+V+ YG C+ R F++ E + G L L F + K V A+ Y+
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLE 117
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG-SSNWTEFAGTFGYVAPELAY 580
+HRD++++N L++ + +VSDFG+++++ ++ + PE+
Sbjct: 118 S---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLM 174
Query: 581 TMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639
K + K D+++FGVL E+ GK P + +N + + RL P
Sbjct: 175 YSKFSSKSDIWAFGVLMWEIYSLGKMPYE-------RFTNSETAEHIAQGLRLYRPHLAS 227
Query: 640 QDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ + + C E + RPT + + +
Sbjct: 228 EK----VYTIMYSCWHEKADERPTFKILLSNI 255
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 179 bits (456), Expect = 3e-52
Identities = 64/277 (23%), Positives = 114/277 (41%), Gaps = 22/277 (7%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKAL 455
EI R ++ E +G G V+ G VA+K +S FL E + +
Sbjct: 13 EIPR--ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSP----EAFLQEAQVM 66
Query: 456 TEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVAN 515
++RH +V+ Y S ++V E + +GSL + L + K ++ +A+
Sbjct: 67 KKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIAS 124
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG-SSNWTEFAGTFGYV 574
++Y+ VHRD+ + N+L+ +V+DFG+A+ ++ + +
Sbjct: 125 GMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 181
Query: 575 APELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634
APE A + T K DV+SFG+L E+ N + R+P
Sbjct: 182 APEAALYGRFTIKSDVWSFGILLTELTTKGRV------PYPGMVNREVLDQVERGYRMPC 235
Query: 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
P + + ++ C + PE RPT + + L
Sbjct: 236 PPECPES----LHDLMCQCWRKEPEERPTFEYLQAFL 268
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 179 bits (456), Expect = 6e-52
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 24/273 (8%)
Query: 401 TKNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
K F + IG G +VY + + EVVA+KK ++ + E++ L ++R
Sbjct: 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSY 519
H N +++ G ++LV E + + + + V L+Y
Sbjct: 74 HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP---LQEVEIAAVTHGALQGLAY 130
Query: 520 MHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELA 579
+H ++HRD+ + N+LLS ++ DFG A + P +S F GT ++APE+
Sbjct: 131 LHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANS----FVGTPYWMAPEVI 183
Query: 580 YTM---KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636
M + K DV+S G+ +E+ + K P + + M+ + + L S
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPLF-------NMNAMSALYHIAQNESPALQS 236
Query: 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
+ + + ++ CL++ P+ RPT + + +
Sbjct: 237 GHWSEYFRNFVD---SCLQKIPQDRPTSEVLLK 266
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 177 bits (451), Expect = 9e-52
Identities = 67/271 (24%), Positives = 106/271 (39%), Gaps = 24/271 (8%)
Query: 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
K Q IG G V G+ G VAVK + + + FL E +T++RH
Sbjct: 7 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKC-----IKNDATAQAFLAEASVMTQLRHS 60
Query: 462 NIVKFYGFCSHPRHS-FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM 520
N+V+ G + ++V E + +GSL + L + G V A+ Y+
Sbjct: 61 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYL 119
Query: 521 HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAY 580
VHRD++++NVL+S + A+VSDFG+ K SS + APE
Sbjct: 120 EG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA---SSTQDTGKLPVKWTAPEALR 173
Query: 581 TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640
K + K DV+SFG+L E+ ++ ++ P
Sbjct: 174 EKKFSTKSDVWSFGILLWEIYSFGRV------PYPRIPLKDVVPRVEKGYKMDAPDGCPP 227
Query: 641 DKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ EV C RP+ + + L
Sbjct: 228 A----VYEVMKNCWHLDAAMRPSFLQLREQL 254
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 176 bits (448), Expect = 3e-51
Identities = 64/269 (23%), Positives = 112/269 (41%), Gaps = 26/269 (9%)
Query: 410 IGIGGQASVYRGELP---SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
+G G +V +G + VAVK + +++ E L E + ++ + IV+
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDP-ALKDELLAEANVMQQLDNPYIVRM 73
Query: 467 YGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFP 526
G C LV E E G L + L + ++ V+ + Y+
Sbjct: 74 IGICEAESW-MLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEE---S 126
Query: 527 PIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW---TEFAGTFGYVAPELAYTMK 583
VHRD++++NVLL +++ A++SDFG++K L+ + + T + APE K
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 584 VTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDK 642
+ K DV+SFGVL E G+ P ++ R+ P+ ++
Sbjct: 187 FSSKSDVWSFGVLMWEAFSYGQKPYR-------GMKGSEVTAMLEKGERMGCPAGCPRE- 238
Query: 643 LISILEVALLCLEESPESRPTMQTVCQLL 671
+ ++ LC E+RP V L
Sbjct: 239 ---MYDLMNLCWTYDVENRPGFAAVELRL 264
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 175 bits (445), Expect = 9e-51
Identities = 61/269 (22%), Positives = 110/269 (40%), Gaps = 23/269 (8%)
Query: 407 EQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVK 465
+ IG G +VY+G + VA + L++ QR F E + L ++H NIV+
Sbjct: 14 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQR-FKEEAEMLKGLQHPNIVR 72
Query: 466 FYGFC----SHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH 521
FY + LV E + G+L L V + + + L ++H
Sbjct: 73 FYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKV---MKIKVLRSWCRQILKGLQFLH 129
Query: 522 HDCFPPIVHRDISSKNVLLSSE-YEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAY 580
PPI+HRD+ N+ ++ ++ D G+A + + GT ++APE+ Y
Sbjct: 130 TRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFA--KAVIGTPEFMAPEM-Y 185
Query: 581 TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640
K E DVY+FG+ LE+ ++P S N + P +
Sbjct: 186 EEKYDESVDVYAFGMCMLEMATSEYP-------YSECQNAAQIYRRVTSGVKPASFDKVA 238
Query: 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669
+ E+ C+ ++ + R +++ +
Sbjct: 239 IP--EVKEIIEGCIRQNKDERYSIKDLLN 265
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 175 bits (445), Expect = 1e-50
Identities = 63/270 (23%), Positives = 119/270 (44%), Gaps = 20/270 (7%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
K + + IG G +VY ++ +G+ VA+++ + L + + +NEI + E +
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENK 75
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSY 519
+ NIV + ++V E L GSL ++++ V + AL +
Sbjct: 76 NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC----MDEGQIAAVCRECLQALEF 131
Query: 520 MHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELA 579
+H + ++HRDI S N+LL + +++DFG + P S + GT ++APE+
Sbjct: 132 LHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188
Query: 580 YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639
K D++S G++A+E+I+G+ P + + + P L P +
Sbjct: 189 TRKAYGPKVDIWSLGIMAIEMIEGEPPYL-----NENPLRALYLIATNGTPELQNPE-KL 242
Query: 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669
L CL+ E R + + + Q
Sbjct: 243 SAIFRDFLN---RCLDMDVEKRGSAKELLQ 269
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 175 bits (445), Expect = 2e-50
Identities = 67/295 (22%), Positives = 118/295 (40%), Gaps = 40/295 (13%)
Query: 407 EQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
++ IG G V+RG+ GE VAVK F S E S RE EI +RH NI+ F
Sbjct: 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFRE--AEIYQTVMLRHENILGF 62
Query: 467 YGFCSHPRHS----FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH 522
+ + +LV + E GSL + L+ + + S A+ L+++H
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHM 118
Query: 523 DCF-----PPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW----TEFAGTFGY 573
+ P I HRD+ SKN+L+ ++D G+A + GT Y
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 178
Query: 574 VAPELAYTM------KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLS---- 623
+APE+ + ++ D+Y+ G++ E+ + ++ S
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238
Query: 624 -------LNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ L P +P ++ + L + ++ C + +R T + + L
Sbjct: 239 EEMRKVVCEQKLRPNIPNRWQSC-EALRVMAKIMRECWYANGAARLTALRIKKTL 292
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 175 bits (444), Expect = 2e-50
Identities = 61/285 (21%), Positives = 119/285 (41%), Gaps = 26/285 (9%)
Query: 394 YEEIIR---ATKNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFL 449
YE + R ++ +G G VY+ + + + A K + E+ +++
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL---EDYM 57
Query: 450 NEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNV 509
EI L H NIVK + + +++ E G++ ++ + + V
Sbjct: 58 VEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELE--RPLTESQIQVV 115
Query: 510 IKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAG 569
K +AL+Y+H I+HRD+ + N+L + + + +++DFG++ F G
Sbjct: 116 CKQTLDALNYLHD---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIG 172
Query: 570 TFGYVAPELAYTM-----KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSL 624
T ++APE+ K DV+S G+ +E+ + + P + + L +
Sbjct: 173 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHH-----ELNPMRVLLKI 227
Query: 625 NEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
+ P L PSR L+ CLE++ ++R T + Q
Sbjct: 228 AKSEPPTLAQPSR-WSSNFKDFLK---KCLEKNVDARWTTSQLLQ 268
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (441), Expect = 3e-50
Identities = 64/272 (23%), Positives = 105/272 (38%), Gaps = 21/272 (7%)
Query: 402 KNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
+++D Q +G G V + E VAVK + + EI + H
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--MKRAVDCPENIKKEICINKMLNH 62
Query: 461 RNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM 520
N+VKFYG +L E G L + + D + + Y+
Sbjct: 63 ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMAGVVYL 119
Query: 521 HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPEL 578
H I HRDI +N+LL ++SDFG+A + + + GT YVAPEL
Sbjct: 120 HGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
Query: 579 AYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637
+ E DV+S G++ ++ G+ P D S + + P +
Sbjct: 177 LKRREFHAEPVDVWSCGIVLTAMLAGELPWD------QPSDSCQEYSDWKEKKTYLNPWK 230
Query: 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
I +++L L E+P +R T+ + +
Sbjct: 231 KIDSAPLALLH---KILVENPSARITIPDIKK 259
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 173 bits (439), Expect = 7e-50
Identities = 63/269 (23%), Positives = 107/269 (39%), Gaps = 26/269 (9%)
Query: 410 IGIGGQASVYRGEL---PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF 466
+G G SV +G VA+K +E + E + E + + ++ + IV+
Sbjct: 17 LGCGNFGSVRQGVYRMRKKQIDVAIKVLK--QGTEKADTEEMMREAQIMHQLDNPYIVRL 74
Query: 467 YGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFP 526
G C LV E G L + L +E ++ V+ + Y+
Sbjct: 75 IGVCQAEAL-MLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEE---K 128
Query: 527 PIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE---FAGTFGYVAPELAYTMK 583
VHRD++++NVLL + + A++SDFG++K L S +T + APE K
Sbjct: 129 NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 188
Query: 584 VTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDK 642
+ + DV+S+GV E + G+ P + R+ P +
Sbjct: 189 FSSRSDVWSYGVTMWEALSYGQKPYK-------KMKGPEVMAFIEQGKRMECPP-ECPPE 240
Query: 643 LISILEVALLCLEESPESRPTMQTVCQLL 671
L +++ C E RP TV Q +
Sbjct: 241 LYALM---SDCWIYKWEDRPDFLTVEQRM 266
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 173 bits (440), Expect = 8e-50
Identities = 57/298 (19%), Positives = 119/298 (39%), Gaps = 44/298 (14%)
Query: 403 NFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALT 456
N + + IG G V++ P +VAVK ++ +Q +F E +
Sbjct: 14 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD--MQADFQREAALMA 71
Query: 457 EIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKE---------------- 500
E + NIVK G C+ + L++E + G L E L +
Sbjct: 72 EFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 131
Query: 501 -----FSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555
S + + + VA ++Y+ VHRD++++N L+ +++DFG+++
Sbjct: 132 PGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSR 188
Query: 556 FLKPGSSNW--TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLL 613
+ A ++ PE + + T + DV+++GV+ E+ +
Sbjct: 189 NIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY---- 244
Query: 614 SSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
++ + + + D + N +L +++ LC + P RP+ ++ ++L
Sbjct: 245 --GMAHEEV-IYYVRDGNILACPENCPLELYNLM---RLCWSKLPADRPSFCSIHRIL 296
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 172 bits (437), Expect = 1e-49
Identities = 58/272 (21%), Positives = 111/272 (40%), Gaps = 20/272 (7%)
Query: 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
+ + +G G VY G VAVK + EFL E + EI+H
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE----DTMEVEEFLKEAAVMKEIKH 72
Query: 461 RNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM 520
N+V+ G C+ +++ E + G+L + L +E S +V + +++A+ Y+
Sbjct: 73 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYL 131
Query: 521 HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN-WTEFAGTFGYVAPELA 579
+HRD++++N L+ + +V+DFG+++ + + + APE
Sbjct: 132 EK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESL 188
Query: 580 YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639
K + K DV++FGVL E+ + E+L+ +
Sbjct: 189 AYNKFSIKSDVWAFGVLLWEIATYGMSPY--------PGIDLSQVYELLEKDYRMERPEG 240
Query: 640 QDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ + E+ C + +P RP+ + Q
Sbjct: 241 CPE--KVYELMRACWQWNPSDRPSFAEIHQAF 270
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 172 bits (437), Expect = 3e-49
Identities = 63/278 (22%), Positives = 111/278 (39%), Gaps = 28/278 (10%)
Query: 403 NFDAEQCIGIGGQASVYRGELP----SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI 458
+F+ + IG G VY G L AVK + +++I +FL E + +
Sbjct: 30 HFN--EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLN--RITDIGEVSQFLTEGIIMKDF 85
Query: 459 RHRNIVKFYGFCSHPRHS-FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANAL 517
H N++ G C S +V ++ G L + N+ ++ + +
Sbjct: 86 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKG--- 142
Query: 518 SYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS----SNWTEFAGTFGY 573
M VHRD++++N +L ++ +V+DFG+A+ + N T +
Sbjct: 143 --MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 200
Query: 574 VAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633
+A E T K T K DV+SFGVL E++ P + ++++ + RL
Sbjct: 201 MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY------PDVNTFDITVYLLQGRRLL 254
Query: 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
P + EV L C E RP+ + +
Sbjct: 255 QPEYCPDP----LYEVMLKCWHPKAEMRPSFSELVSRI 288
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 170 bits (431), Expect = 1e-48
Identities = 56/270 (20%), Positives = 102/270 (37%), Gaps = 21/270 (7%)
Query: 399 RATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTE 457
+ ++F + +G G ++V EL + A+K + + + E ++
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 64
Query: 458 IRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANAL 517
+ H VK Y + + G L + + GS E T A +
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE------TCTRFYTAEIV 118
Query: 518 SYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW--TEFAGTFGYVA 575
S + + I+HRD+ +N+LL+ + +++DFG AK L P S F GT YV+
Sbjct: 119 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 178
Query: 576 PELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635
PEL + D+++ G + +++ G P + N L +I+ P
Sbjct: 179 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFR--------AGNEYLIFQKIIKLEYDFP 230
Query: 636 SRNIQDKLISILEVALLCLEESPESRPTMQ 665
K ++E L R +
Sbjct: 231 E-KFFPKARDLVE---KLLVLDATKRLGCE 256
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 169 bits (429), Expect = 2e-48
Identities = 62/277 (22%), Positives = 121/277 (43%), Gaps = 25/277 (9%)
Query: 403 NFDAEQCIGIGGQASVYRGELPSGE-----VVAVKKFHSLLLSEISVQREFLNEIKALTE 457
++ IG G VY+G L + VA+K + + + +FL E + +
Sbjct: 8 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEK--QRVDFLGEAGIMGQ 65
Query: 458 IRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANAL 517
H NI++ G S + ++ E +E G+L + L EFS + +++ +A +
Sbjct: 66 FSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGM 123
Query: 518 SYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW---TEFAGTFGYV 574
Y+ + VHRD++++N+L++S +VSDFG+++ L+ + +
Sbjct: 124 KYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT 180
Query: 575 APELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPL 634
APE K T DV+SFG++ EV+ + N + + ++ L
Sbjct: 181 APEAISYRKFTSASDVWSFGIVMWEVMTYGERPYW--------ELSNHEVMKAINDGFRL 232
Query: 635 PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
P+ D +I ++ + C ++ RP + +L
Sbjct: 233 PT--PMDCPSAIYQLMMQCWQQERARRPKFADIVSIL 267
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 166 bits (420), Expect = 3e-47
Identities = 72/280 (25%), Positives = 115/280 (41%), Gaps = 28/280 (10%)
Query: 402 KNFDAEQCIGIGGQASVYRGELPS----GEVVAVKKFHSLLLSEISVQREFLNEIKALTE 457
K+ + +G G V RGE + VAVK +LS+ +F+ E+ A+
Sbjct: 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 458 IRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANAL 517
+ HRN+++ YG P +V E GSL + L F + VA +
Sbjct: 68 LDHRNLIRLYGVVLTPPM-KMVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGM 124
Query: 518 SYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW---TEFAGTFGYV 574
Y+ +HRD++++N+LL++ ++ DFG+ + L ++ F +
Sbjct: 125 GYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 575 APELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEIL--DPR 631
APE T + D + FGV E+ G+ P N + L++I R
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI--------GLNGSQILHKIDKEGER 233
Query: 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
LP P QD I V + C PE RPT + L
Sbjct: 234 LPRPEDCPQD----IYNVMVQCWAHKPEDRPTFVALRDFL 269
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 168 bits (426), Expect = 3e-47
Identities = 57/285 (20%), Positives = 114/285 (40%), Gaps = 29/285 (10%)
Query: 391 KIVYEEIIRATKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFL 449
+I ++ ++ ++D + +G G V+R E +G A K ++ S +
Sbjct: 18 EIKHDHVL---DHYDIHEELGTGAFGVVHRVTERATGNNFAAKF---VMTPHESDKETVR 71
Query: 450 NEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNV 509
EI+ ++ +RH +V + ++YE + G L E ++++ + S
Sbjct: 72 KEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH--NKMSEDEAVEY 129
Query: 510 IKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARV--SDFGIAKFLKPGSSNWTEF 567
++ V L +MH + VH D+ +N++ +++ + DFG+ L P S
Sbjct: 130 MRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV-T 185
Query: 568 AGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEI 627
GT + APE+A V D++S GVL+ ++ G P N + +L +
Sbjct: 186 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG--------GENDDETLRNV 237
Query: 628 LDPRLPLPSR---NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
+ I + + L P +R T+ +
Sbjct: 238 KSCDWNMDDSAFSGISEDGKDFIR---KLLLADPNTRMTIHQALE 279
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 164 bits (416), Expect = 3e-46
Identities = 57/287 (19%), Positives = 106/287 (36%), Gaps = 33/287 (11%)
Query: 402 KNFDAEQCIGIGGQASVYRGELPSG---EVVAVKKFHSLLLSEISVQREFLNEIKALTEI 458
+ + IG G V + + A+K+ + R+F E++ L ++
Sbjct: 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDD--HRDFAGELEVLCKL 67
Query: 459 -RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSN-------------DGSIKEFSWI 504
H NI+ G C H + +L E G+L + L + + S
Sbjct: 68 GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 127
Query: 505 VRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW 564
+ VA + Y+ +HRD++++N+L+ Y A+++DFG+++ +
Sbjct: 128 QLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKT 184
Query: 565 TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSL 624
++A E T DV+S+GVL E++ + L
Sbjct: 185 M-GRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP------YCGMTCAELYE 237
Query: 625 NEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
RL P N D++ ++ C E P RP+ + L
Sbjct: 238 KLPQGYRLEKPL-NCDDEVYDLM---RQCWREKPYERPSFAQILVSL 280
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 164 bits (416), Expect = 3e-46
Identities = 55/299 (18%), Positives = 110/299 (36%), Gaps = 45/299 (15%)
Query: 403 NFDAEQCIGIGGQASVYRGELPS------GEVVAVKKFHSLLLSEISVQREFLNEIKALT 456
N + + +G G V VAVK ++ S + ++E+K +T
Sbjct: 38 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEK--ADSSEREALMSELKMMT 95
Query: 457 EI-RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSN--------------------D 495
++ H NIV G C+ +L++E G L L + +
Sbjct: 96 QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 155
Query: 496 GSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555
+ ++ VA + ++ VHRD++++NVL++ ++ DFG+A+
Sbjct: 156 EDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLAR 212
Query: 556 FLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISL 612
+ S+ ++APE + T K DV+S+G+L E+ G +P
Sbjct: 213 DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP---- 268
Query: 613 LSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
++ + +++ + + I + C RP+ + L
Sbjct: 269 ----GIPVDANFYKLIQNGFKMDQPFYATE--EIYIIMQSCWAFDSRKRPSFPNLTSFL 321
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 163 bits (413), Expect = 6e-46
Identities = 51/293 (17%), Positives = 106/293 (36%), Gaps = 38/293 (12%)
Query: 403 NFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALT 456
+ +G G V + VAVK + ++ + ++E+K L+
Sbjct: 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK--PSAHLTEREALMSELKVLS 81
Query: 457 EI-RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKE--------------- 500
+ H NIV G C+ + ++ E G L L
Sbjct: 82 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 141
Query: 501 FSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560
+ VA ++++ +HRD++++N+LL+ ++ DFG+A+ +K
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKND 198
Query: 561 SSNW--TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS 618
S+ ++APE + T + DV+S+G+ E+
Sbjct: 199 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP-------GM 251
Query: 619 NMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
++ +++ + S + ++ C + P RPT + + QL+
Sbjct: 252 PVDSKFYKMIKEGFRMLSPEHAPA--EMYDIMKTCWDADPLKRPTFKQIVQLI 302
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 162 bits (411), Expect = 4e-45
Identities = 52/270 (19%), Positives = 97/270 (35%), Gaps = 20/270 (7%)
Query: 403 NFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
+D + +G G V+R E +G V K ++ + NEI + ++ H
Sbjct: 30 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINT---PYPLDKYTVKNEISIMNQLHHP 86
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH 521
++ + L+ E L G L + ++ + + S N ++ L +MH
Sbjct: 87 KLINLHDAFEDKYEMVLILEFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMH 144
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARV--SDFGIAKFLKPGSSNWTEFAGTFGYVAPELA 579
IVH DI +N++ ++ + V DFG+A L P T + APE+
Sbjct: 145 E---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV-TTATAEFAAPEIV 200
Query: 580 YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639
V D+++ GVL ++ G P ++ L +
Sbjct: 201 DREPVGFYTDMWAIGVLGYVLLSGLSPFA-------GEDDLET-LQNVKRCDWEFDEDAF 252
Query: 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669
+ L++ P R T+ +
Sbjct: 253 SSVSPEAKDFIKNLLQKEPRKRLTVHDALE 282
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 161 bits (408), Expect = 4e-45
Identities = 73/273 (26%), Positives = 114/273 (41%), Gaps = 21/273 (7%)
Query: 401 TKNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
+D +G G + V E + ++VA+K L + NEI L +I+
Sbjct: 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE--GKEGSMENEIAVLHKIK 65
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSY 519
H NIV H +L+ + + G L + + G ++ + +I V +A+ Y
Sbjct: 66 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF---YTERDASRLIFQVLDAVKY 122
Query: 520 MHHDCFPPIVHRDISSKNVLLSSEYE---ARVSDFGIAKFLKPGSSNWTEFAGTFGYVAP 576
+H IVHRD+ +N+L S E +SDFG++K PGS T GT GYVAP
Sbjct: 123 LHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST-ACGTPGYVAP 178
Query: 577 ELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636
E+ ++ D +S GV+A ++ G P N +IL S
Sbjct: 179 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY--------DENDAKLFEQILKAEYEFDS 230
Query: 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
D S + +E+ PE R T + Q
Sbjct: 231 PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 263
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 159 bits (402), Expect = 8e-45
Identities = 67/282 (23%), Positives = 114/282 (40%), Gaps = 27/282 (9%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRGELPS----GEVVAVKKFHSLLLSEISVQREFLNE 451
EI R + + +CIG G V++G S VA+K + SV+ +FL E
Sbjct: 3 EIQR--ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK--NCTSDSVREKFLQE 58
Query: 452 IKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIK 511
+ + H +IVK G + +++ E G L
Sbjct: 59 ALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSF--LQVRKYSLDLASLILYAY 115
Query: 512 SVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS-NWTEFAGT 570
++ AL+Y+ VHRDI+++NVL+SS ++ DFG++++++ + ++
Sbjct: 116 QLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 172
Query: 571 FGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEILD 629
++APE + T DV+ FGV E++ G P N ++
Sbjct: 173 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ-------GVKNNDVIGRIENG 225
Query: 630 PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
RLP+P N L S++ C P RP + L
Sbjct: 226 ERLPMPP-NCPPTLYSLM---TKCWAYDPSRRPRFTELKAQL 263
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 159 bits (402), Expect = 3e-44
Identities = 56/265 (21%), Positives = 100/265 (37%), Gaps = 20/265 (7%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALT-EIRH 460
+F + +G G V+ E + + A+K ++ + E + L+ H
Sbjct: 3 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 62
Query: 461 RNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM 520
+ + + F V E L G L + + +F T + L ++
Sbjct: 63 PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFL 119
Query: 521 HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAY 580
H IV+RD+ N+LL + +++DFG+ K G + F GT Y+APE+
Sbjct: 120 HSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILL 176
Query: 581 TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640
K D +SFGVL E++ G+ P + + I P R ++
Sbjct: 177 GQKYNHSVDWWSFGVLLYEMLIGQSPFH--------GQDEEELFHSIRMDNPFYP-RWLE 227
Query: 641 DKLISILEVALLCLEESPESRPTMQ 665
+ +L PE R ++
Sbjct: 228 KEAKDLLV---KLFVREPEKRLGVR 249
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 157 bits (398), Expect = 1e-43
Identities = 60/284 (21%), Positives = 113/284 (39%), Gaps = 28/284 (9%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRGE-LPSGEV----VAVKKFHSLLLSEISVQREFLN 450
I++ T F + +G G +VY+G +P GE VA+K+ + +E L+
Sbjct: 4 RILKET-EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK--ANKEILD 60
Query: 451 EIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVI 510
E + + + ++ + G C L+ + + G L + + N
Sbjct: 61 EAYVMASVDNPHVCRLLGICLTSTV-QLITQLMPFGCLLDYVREHK--DNIGSQYLLNWC 117
Query: 511 KSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW--TEFA 568
+A ++Y+ +VHRD++++NVL+ + +++DFG+AK L +
Sbjct: 118 VQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 174
Query: 569 GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVI-KGKHPRDFISLLSSSSSNMNLSLNEI 627
++A E T + DV+S+GV E++ G P D +S
Sbjct: 175 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD-------GIPASEISSILE 227
Query: 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
RLP P D + + + C +SRP + +
Sbjct: 228 KGERLPQPPICTID----VYMIMVKCWMIDADSRPKFRELIIEF 267
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 156 bits (395), Expect = 2e-43
Identities = 58/291 (19%), Positives = 119/291 (40%), Gaps = 32/291 (10%)
Query: 396 EIIRATKNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFL 449
E+ R + + +G G VY G VA+K + + + + EFL
Sbjct: 16 EVAR--EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 71
Query: 450 NEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEIL-------SNDGSIKEFS 502
NE + E ++V+ G S + + ++ E + RG L L +N+ + S
Sbjct: 72 NEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 131
Query: 503 WIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562
+ +A+ ++Y++ VHRD++++N +++ ++ ++ DFG+ + +
Sbjct: 132 LSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 188
Query: 563 --NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM 620
+ +++PE T DV+SFGV+ E+ SN
Sbjct: 189 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ------PYQGLSNE 242
Query: 621 NLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ L +++ L N D L E+ +C + +P+ RP+ + +
Sbjct: 243 QV-LRFVMEGGLLDKPDNCPDMLF---ELMRMCWQYNPKMRPSFLEIISSI 289
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 155 bits (394), Expect = 5e-43
Identities = 54/270 (20%), Positives = 103/270 (38%), Gaps = 21/270 (7%)
Query: 403 NFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
+ + +G G V+R E S + K + + Q EI L RHR
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV----KGTDQVLVKKEISILNIARHR 61
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH 521
NI+ + +++E + + E ++ E + + + V AL ++H
Sbjct: 62 NILHLHESFESMEELVMIFEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLH 119
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARV--SDFGIAKFLKPGSSNWTEFAGTFGYVAPELA 579
I H DI +N++ + + + +FG A+ LKPG + Y APE+
Sbjct: 120 S---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRL-LFTAPEYYAPEVH 175
Query: 580 YTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639
V+ D++S G L ++ G +P + +N + + I++
Sbjct: 176 QHDVVSTATDMWSLGTLVYVLLSGINPFL-------AETNQQI-IENIMNAEYTFDEEAF 227
Query: 640 QDKLISILEVALLCLEESPESRPTMQTVCQ 669
++ I ++ L + +SR T Q
Sbjct: 228 KEISIEAMDFVDRLLVKERKSRMTASEALQ 257
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 154 bits (389), Expect = 7e-43
Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 26/273 (9%)
Query: 401 TKNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
+ ++ + +G GG + V+ L VAVK + L + S F E + +
Sbjct: 6 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 65
Query: 460 HRNIVKFYGFCSHPRHS----FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVAN 515
H IV Y + ++V E ++ +L +I+ +G + VI
Sbjct: 66 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQ 122
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTE---FAGTFG 572
AL++ H I+HRD+ N+++S+ +V DFGIA+ + ++ T+ GT
Sbjct: 123 ALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQ 179
Query: 573 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRL 632
Y++PE A V + DVYS G + EV+ G+ P S ++++ + + +
Sbjct: 180 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT-------GDSPVSVAYQHVREDPI 232
Query: 633 PLPSR--NIQDKLISILEVALLCLEESPESRPT 663
P +R + L +++ L ++PE+R
Sbjct: 233 PPSARHEGLSADLDAVVL---KALAKNPENRYQ 262
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 154 bits (391), Expect = 9e-43
Identities = 51/263 (19%), Positives = 100/263 (38%), Gaps = 22/263 (8%)
Query: 402 KNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
++F + +G G V+ +G A+K ++ + +E L+ + H
Sbjct: 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH 63
Query: 461 RNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM 520
I++ +G + F++ + +E G L +L + +
Sbjct: 64 PFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEV------CLAL 117
Query: 521 HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAY 580
+ I++RD+ +N+LL +++DFG AK++ GT Y+APE+
Sbjct: 118 EYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV---PDVTYTLCGTPDYIAPEVVS 174
Query: 581 TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640
T + D +SFG+L E++ G P SN + +IL+ L P
Sbjct: 175 TKPYNKSIDWWSFGILIYEMLAGYTPFY--------DSNTMKTYEKILNAELRFPP-FFN 225
Query: 641 DKLISILEVALLCLEESPESRPT 663
+ + +L + R
Sbjct: 226 EDVKDLLS---RLITRDLSQRLG 245
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 151 bits (383), Expect = 4e-42
Identities = 60/281 (21%), Positives = 114/281 (40%), Gaps = 29/281 (10%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEIS------VQREFLNEIKAL 455
N++ ++ +G G + V R P+ + AVK S ++ L E+ L
Sbjct: 4 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63
Query: 456 TEIR-HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA 514
++ H NI++ FLV++ +++G L + L+ + S +++++
Sbjct: 64 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT---LSEKETRKIMRALL 120
Query: 515 NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYV 574
+ +H IVHRD+ +N+LL + +++DFG + L PG E GT Y+
Sbjct: 121 EVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL-REVCGTPSYL 176
Query: 575 APELAYTM------KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEIL 628
APE+ ++ D++S GV+ ++ G P L L I+
Sbjct: 177 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW--------HRKQMLMLRMIM 228
Query: 629 DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
S D ++ ++ L P+ R T +
Sbjct: 229 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 269
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 150 bits (380), Expect = 2e-41
Identities = 59/293 (20%), Positives = 110/293 (37%), Gaps = 39/293 (13%)
Query: 403 NFDAEQCIGIGGQASVYRGELPS--------GEVVAVKKFHSLLLSEISVQREFLNEIKA 454
+ +G G V E VAVK S + + ++E++
Sbjct: 14 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKD--LSDLISEMEM 71
Query: 455 LTEI-RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSI-------------KE 500
+ I +H+NI+ G C+ +++ E +G+L E L ++
Sbjct: 72 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 131
Query: 501 FSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560
S + VA + Y+ +HRD++++NVL++ + +++DFG+A+ +
Sbjct: 132 LSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 188
Query: 561 SSNWT--EFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS 618
++APE + T + DV+SFGVL E+
Sbjct: 189 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS------PYPGVP 242
Query: 619 NMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
L R+ PS N ++L ++ C P RPT + + + L
Sbjct: 243 VEELFKLLKEGHRMDKPS-NCTNELYMMM---RDCWHAVPSQRPTFKQLVEDL 291
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 151 bits (383), Expect = 4e-41
Identities = 58/268 (21%), Positives = 99/268 (36%), Gaps = 22/268 (8%)
Query: 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNE---IKALTEI 458
+F + IG GG VY +G++ A+K + + LNE + ++
Sbjct: 5 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64
Query: 459 RHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALS 518
IV P + + + G L LS G E + L
Sbjct: 65 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMR---FYAAEIILGLE 121
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE- 577
+MH+ +V+RD+ N+LL R+SD G+A + + GT GY+APE
Sbjct: 122 HMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--GTHGYMAPEV 176
Query: 578 LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637
L + D +S G + ++++G P + + + L + LP
Sbjct: 177 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFR-----QHKTKDKHEIDRMTLTMAVELPD- 230
Query: 638 NIQDKLISILEVALLCLEESPESRPTMQ 665
+ +L S+LE L+ R
Sbjct: 231 SFSPELRSLLE---GLLQRDVNRRLGCL 255
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 148 bits (374), Expect = 9e-41
Identities = 62/285 (21%), Positives = 118/285 (41%), Gaps = 25/285 (8%)
Query: 403 NFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRN 462
+ + IG G VY+ + GE A+KK E + + EI L E++H N
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDE-GIPSTTIREISILKELKHSN 61
Query: 463 IVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH 522
IVK Y + LV+E L++ + +G + + + + N ++Y H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG---LESVTAKSFLLQLLNGIAYCHD 118
Query: 523 DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE-LAYT 581
++HRD+ +N+L++ E E +++DFG+A+ +T T Y AP+ L +
Sbjct: 119 ---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS 175
Query: 582 MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLS------------SSSSNMNLSLNEILD 629
K + D++S G + E++ G +S +S + N++ D
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235
Query: 630 PRLPLPSRNIQDKLISILEVALL-----CLEESPESRPTMQTVCQ 669
P + + + L+ + + L+ P R T + +
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 148 bits (374), Expect = 1e-40
Identities = 52/274 (18%), Positives = 102/274 (37%), Gaps = 23/274 (8%)
Query: 404 FDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLS---EISVQREFLNEIKALTEIR 459
+D + +G G A V + E +G A K + + E+ L EI+
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSY 519
H N++ + + L+ E + G L + L+ S+ E + + L+
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE------EEATEFLKQILNG 125
Query: 520 MHHDCFPPIVHRDISSKNVLLSSEYEAR----VSDFGIAKFLKPGSSNWTEFAGTFGYVA 575
+++ I H D+ +N++L + + DFG+A + G+ + GT +VA
Sbjct: 126 VYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNE-FKNIFGTPEFVA 184
Query: 576 PELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635
PE+ + + D++S GV+ ++ G P +L +
Sbjct: 185 PEIVNYEPLGLEADMWSIGVITYILLSGASPFL--------GDTKQETLANVSAVNYEFE 236
Query: 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
+ + L + P+ R T+Q Q
Sbjct: 237 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 145 bits (367), Expect = 3e-39
Identities = 53/273 (19%), Positives = 97/273 (35%), Gaps = 21/273 (7%)
Query: 402 KNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
+FD + +G G V +G A+K ++ + E + L RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 461 RNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM 520
+ V E G L LS + E A +S +
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE------ERARFYGAEIVSAL 118
Query: 521 HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAY 580
+ +V+RDI +N++L + +++DFG+ K + F GT Y+APE+
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLE 178
Query: 581 TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640
D + GV+ E++ G+ P + + IL + P R +
Sbjct: 179 DNDYGRAVDWWGLGVVMYEMMCGRLPFY--------NQDHERLFELILMEEIRFP-RTLS 229
Query: 641 DKLISILEVALLCLEESPESRPTMQ--TVCQLL 671
+ S+L L++ P+ R +++
Sbjct: 230 PEAKSLLA---GLLKKDPKQRLGGGPSDAKEVM 259
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 143 bits (360), Expect = 9e-39
Identities = 47/285 (16%), Positives = 99/285 (34%), Gaps = 25/285 (8%)
Query: 398 IRATKNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALT 456
+R + + IG G +Y G + +GE VA+K + + E K
Sbjct: 3 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL-----ECVKTKHPQLHIESKIYK 57
Query: 457 EIRHRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANA 516
++ + +C ++ L SL ++ + ++FS + + +
Sbjct: 58 MMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS--RKFSLKTVLLLADQMISR 115
Query: 517 LSYMHHDCFPPIVHRDISSKNVLLSSE---YEARVSDFGIAKFLKPGSSN-------WTE 566
+ Y+H +HRD+ N L+ + DFG+AK + ++
Sbjct: 116 IEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKN 172
Query: 567 FAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNE 626
GT Y + ++ + + D+ S G + + G P + + +S +
Sbjct: 173 LTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK 232
Query: 627 ILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
+ P L + + + L C + +P + QL
Sbjct: 233 MSTPIEVLC-KGYPSEFATYLN---FCRSLRFDDKPDYSYLRQLF 273
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 142 bits (359), Expect = 1e-38
Identities = 56/280 (20%), Positives = 105/280 (37%), Gaps = 26/280 (9%)
Query: 410 IGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEI--SVQREFLNEIKALTEIRHRNIVKF 466
+G G A+VY+ + ++VA+KK SE + R L EIK L E+ H NI+
Sbjct: 6 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 65
Query: 467 YGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFP 526
H + LV++ +E I N + +++ + L + +
Sbjct: 66 LDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTP------SHIKAYMLMTLQGLEYLHQH 119
Query: 527 PIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKV-T 585
I+HRD+ N+LL +++DFG+AK + +T T Y APEL + ++
Sbjct: 120 WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYG 179
Query: 586 EKCDVYSFGVLALEVIKGKHP--------------RDFISLLSSSSSNMNLSLNEILDPR 631
D+++ G + E++ + +M + +
Sbjct: 180 VGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKS 239
Query: 632 LPLPSRNIQDKLISILEVALL--CLEESPESRPTMQTVCQ 669
P + + L+ +P +R T +
Sbjct: 240 FPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 279
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 142 bits (359), Expect = 1e-38
Identities = 62/286 (21%), Positives = 111/286 (38%), Gaps = 25/286 (8%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
NF + IG G VY+ +GEVVA+KK +E V + EI L E+ H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHP 61
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH 521
NIVK +LV+E L + + ++ + + + + L++ H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAL--TGIPLPLIKSYLFQLLQGLAFCH 119
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE-LAY 580
++HRD+ +N+L+++E +++DFG+A+ +T T Y APE L
Sbjct: 120 SHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 581 TMKVTEKCDVYSFGVLALEVIKGKHP----------RDFISLLSSSSSNMNLSLNEILDP 630
+ D++S G + E++ + L + + + + D
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 631 RLPLPSRNIQD-----KLISILEVALL--CLEESPESRPTMQTVCQ 669
+ P QD + +LL L P R + +
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (355), Expect = 5e-38
Identities = 57/294 (19%), Positives = 104/294 (35%), Gaps = 41/294 (13%)
Query: 403 NFDAEQCIGIGGQASVYRG------ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALT 456
+ +G G V + + VAVK R ++E+K L
Sbjct: 14 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHS--EHRALMSELKILI 71
Query: 457 EIRHR-NIVKFYGFCSHPRHS-FLVYECLERGSLAEILSNDGSIKE-------------F 501
I H N+V G C+ P ++ E + G+L+ L + +
Sbjct: 72 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 131
Query: 502 SWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561
+ VA + ++ +HRD++++N+LLS + ++ DFG+A+ +
Sbjct: 132 TLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 188
Query: 562 SNW--TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN 619
+ ++APE + T + DV+SFGVL E+
Sbjct: 189 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY-------PGVK 241
Query: 620 MNLSLNEIL--DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLL 671
++ L R+ P + + + L C P RPT + + L
Sbjct: 242 IDEEFCRRLKEGTRMRAPDYTTPE----MYQTMLDCWHGEPSQRPTFSELVEHL 291
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (357), Expect = 7e-38
Identities = 59/272 (21%), Positives = 110/272 (40%), Gaps = 26/272 (9%)
Query: 407 EQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIV 464
Q +G+G V + + E A+K + E++ + +IV
Sbjct: 17 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 68
Query: 465 KFYGFCSHP----RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM 520
+ + + +V ECL+ G L + + G + F+ + ++KS+ A+ Y+
Sbjct: 69 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYL 127
Query: 521 HHDCFPPIVHRDISSKNVLLSSEYE---ARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE 577
H I HRD+ +N+L +S+ +++DFG AK +S T T YVAPE
Sbjct: 128 HSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT-PCYTPYYVAPE 183
Query: 578 LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637
+ K + CD++S GV+ ++ G P L+ S + P S
Sbjct: 184 VLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWS- 242
Query: 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
+ +++ ++ L+ P R T+
Sbjct: 243 EVSEEVKMLIR---NLLKTEPTQRMTITEFMN 271
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (349), Expect = 2e-37
Identities = 56/274 (20%), Positives = 103/274 (37%), Gaps = 33/274 (12%)
Query: 404 FDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLS---EISVQREFLNEIKALTEIR 459
+ +G GG SVY G + VA+K +S E+ E+ L ++
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 460 --HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANAL 517
+++ + P L+ E E + + + V A+
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAV 123
Query: 518 SYMHHDCFPPIVHRDISSKNVLLS-SEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAP 576
+ H+ ++HRDI +N+L+ + E ++ DFG LK + +T+F GT Y P
Sbjct: 124 RHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD--TVYTDFDGTRVYSPP 178
Query: 577 E-LAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635
E + Y V+S G+L +++ G P + EI+ ++
Sbjct: 179 EWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--------------HDEEIIRGQVFFR 224
Query: 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
R + + ++ CL P RPT + +
Sbjct: 225 QR-VSSECQHLIR---WCLALRPSDRPTFEEIQN 254
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 138 bits (349), Expect = 3e-37
Identities = 45/286 (15%), Positives = 96/286 (33%), Gaps = 29/286 (10%)
Query: 402 KNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
++ + IG G ++ G L + + VA+K S + +E + +
Sbjct: 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIK-----FEPRRSDAPQLRDEYRTYKLLAG 59
Query: 461 RN-IVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSY 519
I Y F H+ LV + L + ++FS K + +
Sbjct: 60 CTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG---RKFSVKTVAMAAKQMLARVQS 116
Query: 520 MHHDCFPPIVHRDISSKNVLLSSEYE-----ARVSDFGIAKFLKPGSSN-------WTEF 567
+H +V+RDI N L+ V DFG+ KF + +
Sbjct: 117 IHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNL 173
Query: 568 AGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEI 627
+GT Y++ + + + D+ + G + + ++G P + ++ + +
Sbjct: 174 SGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ 233
Query: 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673
P L + ++ + + ++ P + L K
Sbjct: 234 STPLRELCA-GFPEEFYKYMH---YARNLAFDATPDYDYLQGLFSK 275
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (347), Expect = 6e-37
Identities = 56/296 (18%), Positives = 108/296 (36%), Gaps = 32/296 (10%)
Query: 399 RATKNFDAEQCIGIGGQASVYRGE--LPSGEVVAVKKFHSLLLSEISVQREFLNEI---K 453
RA + ++ IG G V++ G VA+K+ E + + E+ +
Sbjct: 4 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLR 62
Query: 454 ALTEIRHRNIVKFYGFCSHPR-----HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTN 508
L H N+V+ + C+ R LV+E +++ + +
Sbjct: 63 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPE--PGVPTETIKD 120
Query: 509 VIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFA 568
++ + L ++H +VHRD+ +N+L++S + +++DFG+A+ + +
Sbjct: 121 MMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS-VV 176
Query: 569 GTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHP-------------RDFISLLSS 615
T Y APE+ D++S G + E+ + K D I L
Sbjct: 177 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 236
Query: 616 SSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALL--CLEESPESRPTMQTVCQ 669
+++L I L LL CL +P R + +
Sbjct: 237 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 137 bits (345), Expect = 3e-36
Identities = 61/292 (20%), Positives = 107/292 (36%), Gaps = 35/292 (11%)
Query: 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
++ + IG G VY+ +L SGE+VA+KK +R E++ + ++ H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-------DKRFKNRELQIMRKLDHC 73
Query: 462 NIVKFYGFCSHP------RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVAN 515
NIV+ F + LV + + + + I + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFGIAKFLKPGSSNWTEFAGTFGYV 574
+L+Y+H I HRDI +N+LL + ++ DFG AK L G N + +
Sbjct: 134 SLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRA 190
Query: 575 APELAYTMKVTEKCDVYSFGVLALEVIKGKHP----------RDFISLLSSSSSNMNLSL 624
+ T DV+S G + E++ G+ + I +L + + +
Sbjct: 191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREM 250
Query: 625 NE-----ILDPRLPLPSRNIQDKLISILEVALL--CLEESPESRPTMQTVCQ 669
N P + +AL LE +P +R T C
Sbjct: 251 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 133 bits (334), Expect = 3e-35
Identities = 54/288 (18%), Positives = 117/288 (40%), Gaps = 27/288 (9%)
Query: 402 KNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
+ ++ + IG G +V++ + + E+VA+K+ E V L EI L E++H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELKH 60
Query: 461 RNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM 520
+NIV+ + + LV+E ++ S +G + V + L +
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNG------DLDPEIVKSFLFQLLKGL 114
Query: 521 HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAY 580
++HRD+ +N+L++ E ++++FG+A+ ++ T Y P++ +
Sbjct: 115 GFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLF 174
Query: 581 TMKV-TEKCDVYSFGVLALEVIKGKHP-----------RDFISLLSSSSSNMNLSLNEIL 628
K+ + D++S G + E+ P + LL + + S+ ++
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234
Query: 629 DPRLPLPSRNIQDKL-----ISILEVALL--CLEESPESRPTMQTVCQ 669
D + + ++ LL L+ +P R + + Q
Sbjct: 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 133 bits (336), Expect = 5e-35
Identities = 58/296 (19%), Positives = 102/296 (34%), Gaps = 35/296 (11%)
Query: 401 TKNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
+ IG G V + + VA+KK + + L EIK L R
Sbjct: 7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS--PFEHQTYCQRTLREIKILLRFR 64
Query: 460 HRNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSY 519
H NI+ P + L + L + S + + L Y
Sbjct: 65 HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKY 124
Query: 520 MHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSN---WTEFAGTFGYVAP 576
+H ++HRD+ N+LL++ + ++ DFG+A+ P + TE+ T Y AP
Sbjct: 125 IHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 181
Query: 577 ELAYT-MKVTEKCDVYSFGVLALEVIKGKHP----------------------RDFISLL 613
E+ T+ D++S G + E++ + D ++
Sbjct: 182 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 241
Query: 614 SSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
+ + N LSL N K + +L+ L +P R ++
Sbjct: 242 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLD---KMLTFNPHKRIEVEQALA 294
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (322), Expect = 2e-33
Identities = 53/306 (17%), Positives = 105/306 (34%), Gaps = 41/306 (13%)
Query: 398 IRATKNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALT 456
++ IG G V++ +G+ VA+KK E L EIK L
Sbjct: 6 CDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE-GFPITALREIKILQ 64
Query: 457 EIRHRNIVKFYGFCSHP--------RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTN 508
++H N+V C +LV++ E + + + +F+
Sbjct: 65 LLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNV---LVKFTLSEIKR 121
Query: 509 VIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS----NW 564
V++ + N L Y+H I+HRD+ + NVL++ + +++DFG+A+ + +
Sbjct: 122 VMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 178
Query: 565 TEFAGTFGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFIS------------ 611
T T Y PEL + D++ G + E+ +
Sbjct: 179 TNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLC 238
Query: 612 ------LLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALL--CLEESPESRPT 663
+ + + E++ + ++ + + L+ L P R
Sbjct: 239 GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRID 298
Query: 664 MQTVCQ 669
Sbjct: 299 SDDALN 304
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (321), Expect = 3e-33
Identities = 54/281 (19%), Positives = 105/281 (37%), Gaps = 25/281 (8%)
Query: 402 KNFDAEQCIGIGGQASVYRGEL----PSGEVVAVKKFH-SLLLSEISVQREFLNEIKALT 456
+NF+ + +G G V+ +G++ A+K + ++ + E + L
Sbjct: 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 83
Query: 457 EIRHR-NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVAN 515
IR +V + L+ + + G L LS E V
Sbjct: 84 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQ------IYVGE 137
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWT-EFAGTFGYV 574
+ + H I++RDI +N+LL S ++DFG++K + +F GT Y+
Sbjct: 138 IVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYM 197
Query: 575 APELAYTMK--VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRL 632
AP++ + D +S GVL E++ G P + ++ IL
Sbjct: 198 APDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT----VDGEKNSQAEISRRILKSEP 253
Query: 633 PLPSRNIQDKLISILEVALLCLEESPESRPTM--QTVCQLL 671
P P + + +++ L + P+ R + ++
Sbjct: 254 PYP-QEMSALAKDLIQ---RLLMKDPKKRLGCGPRDADEIK 290
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 128 bits (322), Expect = 4e-33
Identities = 54/261 (20%), Positives = 97/261 (37%), Gaps = 22/261 (8%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHR 461
FD + +G G V + SG A+K + ++ LNE + L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFP 101
Query: 462 NIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMH 521
+VK + ++V E + G + L G FS + Y+H
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR---FSEPHARFYAAQIVLTFEYLH 158
Query: 522 HDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYT 581
+++RD+ +N+L+ + +V+DFG AK +K GT +APE+ +
Sbjct: 159 SLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVK---GRTWTLCGTPEALAPEIILS 212
Query: 582 MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQD 641
+ D ++ GVL E+ G P + +I+ ++ PS +
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFF--------ADQPIQIYEKIVSGKVRFPS-HFSS 263
Query: 642 KLISILEVALLCLEESPESRP 662
L +L L+ R
Sbjct: 264 DLKDLLR---NLLQVDLTKRF 281
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 119 bits (299), Expect = 3e-30
Identities = 58/299 (19%), Positives = 104/299 (34%), Gaps = 48/299 (16%)
Query: 403 NFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-H 460
++ + +G G + V+ + + E V VK +++ EIK L +R
Sbjct: 36 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP------VKKKKIKREIKILENLRGG 89
Query: 461 RNIVKFYGFCSHP--RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALS 518
NI+ P R LV+E + ++ + + + + AL
Sbjct: 90 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQL------YQTLTDYDIRFYMYEILKALD 143
Query: 519 YMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPE 577
Y H I+HRD+ NV++ E + R+ D+G+A+F PG + + + PE
Sbjct: 144 YCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-YNVRVASRYFKGPE 199
Query: 578 LAYTMK-VTEKCDVYSFGVLALEVIKGKHP-----------------------RDFISLL 613
L + D++S G + +I K P D+I
Sbjct: 200 LLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 259
Query: 614 SSS-SSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALL--CLEESPESRPTMQTVCQ 669
+ N L R + L+S + L L +SR T + +
Sbjct: 260 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 118 bits (297), Expect = 7e-30
Identities = 61/310 (19%), Positives = 113/310 (36%), Gaps = 49/310 (15%)
Query: 394 YEEIIRAT----KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREF 448
+E+ + + Q +G G +V + +G VA+KK + SE+ +R
Sbjct: 6 RQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKR-A 64
Query: 449 LNEIKALTEIRHRNIVKFYGFCSHPRHS------FLVYECLERGSLAEILSNDGSIKEFS 502
E++ L +RH N++ + +LV + L +++ + ++
Sbjct: 65 YRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMG-TDLGKLMKH----EKLG 119
Query: 503 WIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562
++ + L Y+H HRD+ N+ ++ + E ++ DFG+A+ S
Sbjct: 120 EDRIQFLVYQMLKGLRYIHAAGII---HRDLKPGNLAVNEDCELKILDFGLARQA---DS 173
Query: 563 NWTEFAGTFGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGKHP--------------- 606
T + T Y APE+ M+ T+ D++S G + E+I GK
Sbjct: 174 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMK 233
Query: 607 -------RDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPE 659
L S + N L E+ N +++LE L E
Sbjct: 234 VTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLE---KMLVLDAE 290
Query: 660 SRPTMQTVCQ 669
R T
Sbjct: 291 QRVTAGEALA 300
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 115 bits (289), Expect = 1e-28
Identities = 57/305 (18%), Positives = 110/305 (36%), Gaps = 48/305 (15%)
Query: 402 KNFDAEQCIGIGGQASVYRG-ELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH 460
K + + IG G Q V + VA+KK ++ +R E+ + + H
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR-AYRELVLMKCVNH 75
Query: 461 RNIVKFYGFCSHPRHS------FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA 514
+NI+ + + +LV E ++ I E + ++ +
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQML 129
Query: 515 NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYV 574
+ ++H +HRD+ N+++ S+ ++ DFG+A+ S T + T Y
Sbjct: 130 CGIKHLHSAGI---IHRDLKPSNIVVKSDCTLKILDFGLARTAGT-SFMMTPYVVTRYYR 185
Query: 575 APELAYTMKVTEKCDVYSFGVLALEVIKGKHP---------------------RDFISLL 613
APE+ M E D++S G + E+++ K +F+ L
Sbjct: 186 APEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245
Query: 614 SSSSSNMNLSLNEILDPRLP-------LPSRNIQDKLISILEVALL--CLEESPESRPTM 664
+ N + + P P+ + +KL + LL L P R ++
Sbjct: 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISV 305
Query: 665 QTVCQ 669
Q
Sbjct: 306 DDALQ 310
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 114 bits (285), Expect = 3e-28
Identities = 51/297 (17%), Positives = 97/297 (32%), Gaps = 41/297 (13%)
Query: 401 TKNFDAEQCIGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR 459
+ + +G G SV +G VAVKK S I +R E++ L ++
Sbjct: 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKR-TYRELRLLKHMK 75
Query: 460 HRNIVKFYGFCSHPR-----HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVA 514
H N++ + R + + L L I+ ++ + +I +
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC----QKLTDDHVQFLIYQIL 131
Query: 515 NALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNWTEFAGTFGYV 574
L Y+H HRD+ N+ ++ + E ++ DFG+A+ A +
Sbjct: 132 RGLKYIHSADII---HRDLKPSNLAVNEDCELKILDFGLARH--TDDEMTGYVATRWYRA 186
Query: 575 APELAYTMKVTEKCDVYSFGVLALEVIKGKHP----------------------RDFISL 612
+ M + D++S G + E++ G+ +
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKI 246
Query: 613 LSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669
S S+ N SL ++ + +LE L + R T
Sbjct: 247 SSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLE---KMLVLDSDKRITAAQALA 300
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 108 bits (271), Expect = 8e-27
Identities = 57/289 (19%), Positives = 109/289 (37%), Gaps = 15/289 (5%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
+P + + L L +N ++ G+ NL L L + NN++ P + L L
Sbjct: 24 KVPKDL--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKL 81
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITG 126
R++L +N L ++ L + +++ + + L + +G
Sbjct: 82 ERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVV-ELGTNPLKSSG 140
Query: 127 SIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSEL 186
+ +L + + I I G SL L L+GNK++ L L+ L
Sbjct: 141 IENGAFQGMKKLSYIRIADTNI---TTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNL 197
Query: 187 EYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGG 246
L LS N +S +L N + L+L+NN+ K P L + + L +N +
Sbjct: 198 AKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLHNNNISA 256
Query: 247 ------EIPPQICNLESLEKLNVSHNNLS--GLIPSCFEGMHGLSCIDI 287
P S +++ N + + PS F ++ + + +
Sbjct: 257 IGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQL 305
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 88.2 bits (217), Expect = 1e-19
Identities = 44/230 (19%), Positives = 84/230 (36%), Gaps = 4/230 (1%)
Query: 85 GIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFS 144
+ P+ LD+ +N + + L TL N I+ P L +L +L S
Sbjct: 28 DLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87
Query: 145 LNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETL 204
NQ+ L+ L K+ ++ L + + L + K SG
Sbjct: 88 KNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVV-ELGTNPLKSSGIENGAF 146
Query: 205 GNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVS 264
+ K+ Y+ +++ + L+EL L N + + L +L KL +S
Sbjct: 147 QGMKKLSYIRIADTNITT---IPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLS 203
Query: 265 HNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNR 314
N++S + L + ++ N+L+ + +Y + L N
Sbjct: 204 FNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNN 253
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 80.1 bits (196), Expect = 6e-17
Identities = 42/213 (19%), Positives = 81/213 (38%), Gaps = 4/213 (1%)
Query: 114 LGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLS 173
L+ N IT + L LH L N+I P L L L L+ N+L
Sbjct: 33 TALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK 92
Query: 174 GNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQ 233
++ +L EL + K+ S+ L N + V L + + + + +
Sbjct: 93 ELPEKMPKTLQELRVHENEITKVRKSVFNGL-NQMIVVELGTNPLKSSGIENGAFQGMKK 151
Query: 234 LSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELL 293
LS + ++ + IP + SL +L++ N ++ + + +G++ L+ + +S+N +
Sbjct: 152 LSYIRIADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSIS 208
Query: 294 GLIPNSTGFQYDPIQALRGNRGLCGDVEGFQSC 326
+ S + N L G
Sbjct: 209 AVDNGSLANTPHLRELHLNNNKLVKVPGGLADH 241
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 78.9 bits (193), Expect = 1e-16
Identities = 51/247 (20%), Positives = 82/247 (33%), Gaps = 13/247 (5%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
N +S P + L+ LYL N L L +L E + ++ + L
Sbjct: 64 NNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGL 123
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFS 120
+ + + +G + F L+++ I+ N G L L+
Sbjct: 124 NQMIVVE-LGTNPLKSSGIENGAFQGMKKLSYIRIADTNI---TTIPQGLPPSLTELHLD 179
Query: 121 MNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVL 180
N IT + L L KL S N I L N L L LN NKL P L
Sbjct: 180 GNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKV-PGGL 238
Query: 181 GSLSELEYLDLSTNKLSG------SIPETLGNLLKVHYLNLSNN--QFRKEFPVELEKLV 232
++ + L N +S P ++L +N Q+ + P +
Sbjct: 239 ADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVY 298
Query: 233 QLSELDL 239
+ + L
Sbjct: 299 VRAAVQL 305
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Score = 57.4 bits (137), Expect = 1e-09
Identities = 28/143 (19%), Positives = 48/143 (33%), Gaps = 3/143 (2%)
Query: 185 ELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFL 244
L + S L +P+ L L+L NN+ + + + L L L L +N +
Sbjct: 11 HLRVVQCSDLGLE-KVPKDLPPDTA--LLDLQNNKITEIKDGDFKNLKNLHTLILINNKI 67
Query: 245 GGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQY 304
P L LE+L +S N L L + + L + ++ + N
Sbjct: 68 SKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMI 127
Query: 305 DPIQALRGNRGLCGDVEGFQSCK 327
+ + FQ K
Sbjct: 128 VVELGTNPLKSSGIENGAFQGMK 150
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 97.4 bits (241), Expect = 2e-22
Identities = 48/249 (19%), Positives = 85/249 (34%), Gaps = 25/249 (10%)
Query: 410 IGIGGQASVYRGE-LPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYG 468
+G G ++V+ + + + VA+K + +EIK L + + K
Sbjct: 21 LGWGHFSTVWLAKDMVNNTHVAMKIVRG----DKVYTEAAEDEIKLLQRVNDADNTKEDS 76
Query: 469 FCS-------------HPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVAN 515
+ P +V G L + I + K +
Sbjct: 77 MGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLL 136
Query: 516 ALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFGIAKFLKPGSS--NWTEFAGTFG 572
L YMH C I+H DI +NVL+ + IA ++T T
Sbjct: 137 GLDYMHRRC--GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTRE 194
Query: 573 YVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRL 632
Y +PE+ D++S L E+I G F S + + + +I++
Sbjct: 195 YRSPEVLLGAPWGCGADIWSTACLIFELITGDFL--FEPDEGHSYTKDDDHIAQIIELLG 252
Query: 633 PLPSRNIQD 641
LPS +++
Sbjct: 253 ELPSYLLRN 261
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 95.6 bits (236), Expect = 2e-22
Identities = 54/265 (20%), Positives = 91/265 (34%), Gaps = 7/265 (2%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
A+P + + ++L+ N +S LT L + +N L + LA L
Sbjct: 25 AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82
Query: 67 NRVHLEQNHLTGNI-SEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNIT 125
++ L N ++ F L L + + L L N +
Sbjct: 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 142
Query: 126 GSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSE 185
L L L N+I L SL+ L+L+ N+++ P L
Sbjct: 143 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGR 202
Query: 186 LEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLG 245
L L L N LS E L L + YL L++N + + L + S + +
Sbjct: 203 LMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVP 261
Query: 246 GEIPPQICNLESLEKLNVSHNNLSG 270
+P L + ++ N+L G
Sbjct: 262 CSLPQ---RLAGRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 94.5 bits (233), Expect = 5e-22
Identities = 56/265 (21%), Positives = 95/265 (35%), Gaps = 7/265 (2%)
Query: 31 SVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNL 90
+VP I + + N++ S R +L + L N L + F L
Sbjct: 25 AVPVGIPAA--SQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALL 82
Query: 91 TFLDISHNNFYGEIWSSW-GKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIV 149
LD+S N + + +L TL+ + P L L L N +
Sbjct: 83 EQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 142
Query: 150 GEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLK 209
+L +L +L L+GN++S R L L+ L L N+++ P +L +
Sbjct: 143 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGR 202
Query: 210 VHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLS 269
+ L L N L L L L L+ N + L+K S + +
Sbjct: 203 LMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVP 261
Query: 270 GLIPSCFEGMHGLSCIDISYNELLG 294
+P + + G ++ N+L G
Sbjct: 262 CSLP---QRLAGRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.9 bits (177), Expect = 9e-15
Identities = 40/198 (20%), Positives = 69/198 (34%), Gaps = 4/198 (2%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
L P + L L+L L PG L L L + +N L +
Sbjct: 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTF 149
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFS 120
R+L +L + L N ++ F +L L + N ++ +L TL
Sbjct: 150 RDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLF 209
Query: 121 MNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVL 180
NN++ + L L L + N V + L + +++ +LP+
Sbjct: 210 ANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQ-- 266
Query: 181 GSLSELEYLDLSTNKLSG 198
L+ + L+ N L G
Sbjct: 267 -RLAGRDLKRLAANDLQG 283
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.4 bits (147), Expect = 7e-11
Identities = 41/204 (20%), Positives = 63/204 (30%), Gaps = 2/204 (0%)
Query: 116 TLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175
+ N I+ L L N + L L L L+ N +
Sbjct: 36 RIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRS 95
Query: 176 L-PRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQL 234
+ P L L L L L P L + YL L +N + L L
Sbjct: 96 VDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNL 155
Query: 235 SELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLG 294
+ L L N + L SL++L + N ++ + P F + L + + N L
Sbjct: 156 THLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 215
Query: 295 LIPNSTGFQYDPIQ-ALRGNRGLC 317
L + L N +C
Sbjct: 216 LPTEALAPLRALQYLRLNDNPWVC 239
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 97.4 bits (241), Expect = 2e-22
Identities = 62/338 (18%), Positives = 112/338 (33%), Gaps = 71/338 (21%)
Query: 10 PSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR-------- 61
V NL + +N L+ P + NL +L ++ ++NNQ+ P +
Sbjct: 60 DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTL 117
Query: 62 -------------------------NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDIS 96
++ ++ + + + L L
Sbjct: 118 FNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTL 177
Query: 97 HNNF----YGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEI 152
S K L +L + N I+ P I L +L + NQ+
Sbjct: 178 ERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILT--NLDELSLNGNQLKD-- 233
Query: 153 PIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIP----------- 201
L +L +L L L N++S P L L++L L L N++S P
Sbjct: 234 IGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLE 291
Query: 202 ---------ETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQI 252
+ NL + YL L N P + L +L L ++N + +
Sbjct: 292 LNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFANNKVSD--VSSL 347
Query: 253 CNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYN 290
NL ++ L+ HN +S L P + ++ + ++
Sbjct: 348 ANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 94.3 bits (233), Expect = 3e-21
Identities = 50/193 (25%), Positives = 80/193 (41%), Gaps = 16/193 (8%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
N +S P TNL L L N L G + +L LT+L++ NNQ+ P L
Sbjct: 207 NQISDITPLG--ILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAP--LS 260
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
L L + L N ++ + ++ N E S + L L
Sbjct: 261 GLTKLTELKLGANQISNISP----LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYF 316
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
NNI+ P + L +L +L F+ N++ L NL ++N+L N++S P L
Sbjct: 317 NNISDISP--VSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQISDLTP--LA 370
Query: 182 SLSELEYLDLSTN 194
+L+ + L L+
Sbjct: 371 NLTRITQLGLNDQ 383
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 65.4 bits (158), Expect = 6e-12
Identities = 63/363 (17%), Positives = 116/363 (31%), Gaps = 93/363 (25%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQ 73
L +++ +V +L Q+T L+ D + + + L +L +++
Sbjct: 20 ALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGI--KSIDGVEYLNNLTQINFSN 75
Query: 74 NHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGT----------------- 116
N LT L + +++N + T
Sbjct: 76 NQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTN 133
Query: 117 ----------------------LNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPI 154
L + + L L +LD S N++ +
Sbjct: 134 LNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVL 193
Query: 155 ELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLN 214
L +L L+ N++S P + + L+ L L+ N+L TL +L + L+
Sbjct: 194 --AKLTNLESLIATNNQISDITPLGIL--TNLDELSLNGNQLKD--IGTLASLTNLTDLD 247
Query: 215 LSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIP--------------------PQICN 254
L+NNQ P L L +L+EL L N + P I N
Sbjct: 248 LANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISN 305
Query: 255 LESLEKLNVSHNNLSGLIP--------------------SCFEGMHGLSCIDISYNELLG 294
L++L L + NN+S + P S + ++ + +N++
Sbjct: 306 LKNLTYLTLYFNNISDISPVSSLTKLQRLFFANNKVSDVSSLANLTNINWLSAGHNQISD 365
Query: 295 LIP 297
L P
Sbjct: 366 LTP 368
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} Length = 384 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Score = 41.1 bits (95), Expect = 3e-04
Identities = 57/316 (18%), Positives = 108/316 (34%), Gaps = 56/316 (17%)
Query: 80 ISEVF--GIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQ 137
I+++F + N + S Q+ TL I SI + L
Sbjct: 12 INQIFTDTALAEKMKTVLGKTNVTDTV--SQTDLDQVTTLQADRLGIK-SIDG-VEYLNN 67
Query: 138 LHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKL------------------------- 172
L +++FS NQ+ P L NL L +++N N++
Sbjct: 68 LTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDI 125
Query: 173 --------------SGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNN 218
S N + +LS L L + + + L NL + L++S+N
Sbjct: 126 DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSN 185
Query: 219 QFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEG 278
+ + KL L L ++N + P I +L++L+++ N L
Sbjct: 186 KVSDISVL--AKLTNLESLIATNNQISDITPLGILT--NLDELSLNGNQLKD--IGTLAS 239
Query: 279 MHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCGDVEGFQSCKAFVSQKHVFEN 338
+ L+ +D++ N++ L P S + + L+ ++ A + +
Sbjct: 240 LTNLTDLDLANNQISNLAPLSGLTK---LTELKLGANQISNISPLAGLTALTNLELNENQ 296
Query: 339 KWFLIIIPILGVFALL 354
+ I L L
Sbjct: 297 LEDISPISNLKNLTYL 312
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 82.5 bits (203), Expect = 9e-19
Identities = 29/176 (16%), Positives = 55/176 (31%), Gaps = 26/176 (14%)
Query: 408 QCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQ-------REFLNEIKALTEIRH 460
+ +G G +++V+ VK S V+ F
Sbjct: 6 KLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEF 65
Query: 461 RNIVKFYGFCSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYM 520
R + K G +++ E ++ L + + V+ + ++
Sbjct: 66 RALQKLQGLAVPKVYAW------EGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKF 119
Query: 521 HHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK---------FLKPGSSNWTEF 567
+H IVH D+S NVL+ SE + DF + L+ N +
Sbjct: 120 YHRG---IVHGDLSQYNVLV-SEEGIWIIDFPQSVEVGEEGWREILERDVRNIITY 171
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 83.3 bits (204), Expect = 4e-18
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 2/225 (0%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
+N+L G IPP++ T L LY+ ++SG++P + + L L+ N L G +P S+
Sbjct: 86 INNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSI 145
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFS 120
+L +L + + N ++G I + +G + L N L ++ S
Sbjct: 146 SSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLS 205
Query: 121 MNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVL 180
N + G G + + + ++G K+LN L L N++ G LP+ L
Sbjct: 206 RNMLEGDASVLFGS-DKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGL 264
Query: 181 GSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFP 225
L L L++S N L G IP+ GNL + +NN+ P
Sbjct: 265 TQLKFLHSLNVSFNNLCGEIPQ-GGNLQRFDVSAYANNKCLCGSP 308
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 83.3 bits (204), Expect = 5e-18
Identities = 63/255 (24%), Positives = 95/255 (37%), Gaps = 5/255 (1%)
Query: 2 NHLSGA--IPPSVGNFTNLKGLYLYSN-SLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPR 58
+L IP S+ N L LY+ +L G +P I L QL L I + + G IP
Sbjct: 60 LNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPD 119
Query: 59 SLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLN 118
L + +L + N L+G + PNL + N G I S+G +L T
Sbjct: 120 FLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSM 179
Query: 119 FSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPR 178
N P L +D S N + G+ + +
Sbjct: 180 TISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVL-FGSDKNTQKIHLAKNSLAFDLG 238
Query: 179 VLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELD 238
+G L LDL N++ G++P+ L L +H LN+S N E P + L +
Sbjct: 239 KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSA 297
Query: 239 LSHNFLGGEIPPQIC 253
++N P C
Sbjct: 298 YANNKCLCGSPLPAC 312
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 81.3 bits (199), Expect = 2e-17
Identities = 67/285 (23%), Positives = 105/285 (36%), Gaps = 28/285 (9%)
Query: 37 GNLMQLTNLEIDNNQLFG--QIPRSLRNLASLNRVHLEQNH-LTGNISEVFGIYPNLTFL 93
++ NL++ L IP SL NL LN +++ + L G I L +L
Sbjct: 47 TQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYL 106
Query: 94 DISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIP 153
I+H N G I + + L TL+FS N ++G++PP I L L + F N+I G IP
Sbjct: 107 YITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIP 166
Query: 154 IELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYL 213
G+ L + N+L+G IP T NL
Sbjct: 167 DSYGSFSKLFTSMTISR-----------------------NRLTGKIPPTFANLNLAFVD 203
Query: 214 NLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIP 273
N + ++ + + L +N + G +P
Sbjct: 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDL--RNNRIYGTLP 261
Query: 274 SCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCG 318
+ L +++S+N L G IP Q + A N+ LCG
Sbjct: 262 QGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.4 bits (155), Expect = 5e-12
Identities = 33/191 (17%), Positives = 60/191 (31%), Gaps = 8/191 (4%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASL 66
A+PP + + L+L N L + +LT L +D +L L L
Sbjct: 24 ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79
Query: 67 NRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITG 126
+ L N L + + N + + + N
Sbjct: 80 GTLDLSHNQLQSLPLLGQTLPAL--TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK 137
Query: 127 SIPPEIGKLYQLHKL-DFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSE 185
++PP + + + N + L L++L+ L+L N L +P+
Sbjct: 138 TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHL 196
Query: 186 LEYLDLSTNKL 196
L + L N
Sbjct: 197 LPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.8 bits (138), Expect = 8e-10
Identities = 52/210 (24%), Positives = 80/210 (38%), Gaps = 7/210 (3%)
Query: 59 SLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLN 118
+ +AS V+ ++ +LT + + + T L +S N Y ++ +L LN
Sbjct: 5 EVSKVASHLEVNCDKRNLT-ALPP--DLPKDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 119 FSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPR 178
+T G L L LD S NQ+ + L +L L ++ N+L+
Sbjct: 62 LDRAELT--KLQVDGTLPVLGTLDLSHNQLQSLPLLG-QTLPALTVLDVSFNRLTSLPLG 118
Query: 179 VLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELD 238
L L EL+ L L N+L P L K+ L+L+NN + L L L L
Sbjct: 119 ALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLL 178
Query: 239 LSHNFLGGEIPPQICNLESLEKLNVSHNNL 268
L N IP L + N
Sbjct: 179 LQEN-SLYTIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.0 bits (136), Expect = 2e-09
Identities = 32/173 (18%), Positives = 52/173 (30%), Gaps = 8/173 (4%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL- 60
N L ++ +T L L L + ++ L L + L
Sbjct: 41 NLLYTFSLATLMPYTRLTQLN-----LDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLL 95
Query: 61 -RNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNF 119
+ L +L + + N LT L L + N +L L+
Sbjct: 96 GQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSL 155
Query: 120 SMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKL 172
+ NN+T + L L L N + IP L + L+GN
Sbjct: 156 ANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.5 bits (119), Expect = 2e-07
Identities = 53/209 (25%), Positives = 79/209 (37%), Gaps = 6/209 (2%)
Query: 109 GKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLN 168
K +N N+T ++PP++ K L S N + L L L L+
Sbjct: 7 SKVASHLEVNCDKRNLT-ALPPDLPKD--TTILHLSENLLYTFSLATLMPYTRLTQLNLD 63
Query: 169 GNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVEL 228
+L+ +L L LDLS N+L ++S N+ L
Sbjct: 64 RAELTKLQVDG--TLPVLGTLDLSHNQLQSLPLLGQTLPALTVL-DVSFNRLTSLPLGAL 120
Query: 229 EKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDIS 288
L +L EL L N L P + LEKL++++NNL+ L G+ L + +
Sbjct: 121 RGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQ 180
Query: 289 YNELLGLIPNSTGFQYDPIQALRGNRGLC 317
N L + G P L GN LC
Sbjct: 181 ENSLYTIPKGFFGSHLLPFAFLHGNPWLC 209
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 61.2 bits (147), Expect = 4e-11
Identities = 34/216 (15%), Positives = 67/216 (31%), Gaps = 18/216 (8%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLR 61
++++ + + + + L + ++ ++ G + L L LE+ +NQ+ P
Sbjct: 29 SNVTDTVTQA--DLDGITTLSAFGTGVT-TIEG-VQYLNNLIGLELKDNQITDLAPLK-- 82
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
+L + + L + + +
Sbjct: 83 --------NLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVL 134
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
I + S+ L NL L L + NK+S P L
Sbjct: 135 YLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LA 192
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSN 217
SL L + L N++S P L N + + L+N
Sbjct: 193 SLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 52.0 bits (123), Expect = 4e-08
Identities = 34/228 (14%), Positives = 64/228 (28%), Gaps = 18/228 (7%)
Query: 38 NLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISH 97
L + + + + + +L + + +T E NL L++
Sbjct: 17 ALANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT--IEGVQYLNNLIGLELKD 72
Query: 98 NNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELG 157
N L+ + +I + L
Sbjct: 73 NQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQ 132
Query: 158 NLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSN 217
L + N + L+G LS S L NL K+ L +
Sbjct: 133 VLYLDLNQITNISPLAGLTN----------LQYLSIGNAQVSDLTPLANLSKLTTLKADD 182
Query: 218 NQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSH 265
N+ P L L L E+ L +N + P + N +L + +++
Sbjct: 183 NKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} Length = 227 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Score = 46.6 bits (109), Expect = 3e-06
Identities = 32/227 (14%), Positives = 67/227 (29%), Gaps = 18/227 (7%)
Query: 62 NLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121
LA+ ++ ++++T +++ +T L L L
Sbjct: 17 ALANAIKIAAGKSNVTDTVTQ--ADLDGITTLSAFGTGVTT--IEGVQYLNNLIGLELKD 72
Query: 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLG 181
N IT + L ++ +L+ S N + I L L
Sbjct: 73 NQIT--DLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAG--- 127
Query: 182 SLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241
I + LS + L L +L+ L
Sbjct: 128 -----LSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADD 182
Query: 242 NFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDIS 288
N + P + +L +L ++++ +N +S + P L + ++
Sbjct: 183 NKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.5 bits (145), Expect = 1e-10
Identities = 38/274 (13%), Positives = 87/274 (31%), Gaps = 16/274 (5%)
Query: 43 TNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYG 102
L++ L + L + + ++ + ++E F + +D+S++
Sbjct: 3 QTLDLTGKNLHPDVTGRLLSQ-GVIAFRCPRSFMDQPLAEHFSP-FRVQHMDLSNSVIEV 60
Query: 103 E-IWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKS 161
+ +C +L L+ ++ I + K L +L+ S E ++
Sbjct: 61 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSC 120
Query: 162 LNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSG---------SIPETLGNLLKVHY 212
LN + + + ++ LSG VH
Sbjct: 121 SRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHL 180
Query: 213 LNLSNNQFRKEFPVELEKLVQLSELDLSH-NFLGGEIPPQICNLESLEKLNVSHNNLSGL 271
+ + + E +L L L LS + E ++ + +L+ L V G
Sbjct: 181 DLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIVPDGT 240
Query: 272 IPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYD 305
+ E + L I+ + + + G + +
Sbjct: 241 LQLLKEALPHL---QINCSHFTTIARPTIGNKKN 271
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.4 bits (137), Expect = 1e-09
Identities = 38/215 (17%), Positives = 70/215 (32%), Gaps = 13/215 (6%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPR--- 58
+ + + L+ L L LS + + L L + F +
Sbjct: 57 VIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTL 116
Query: 59 -----SLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQ 113
L L + H+ ++ V L N ++ + +C
Sbjct: 117 LSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPN 176
Query: 114 LGTLNFSMN-NITGSIPPEIGKLYQLHKLDFS-LNQIVGEIPIELGNLKSLNYLVLNGNK 171
L L+ S + + E +L L L S I+ E +ELG + +L L + G
Sbjct: 177 LVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGIV 236
Query: 172 LSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGN 206
G L + +L L ++ + + T+GN
Sbjct: 237 PDGTLQLLKEALPH---LQINCSHFTTIARPTIGN 268
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.5 bits (119), Expect = 3e-07
Identities = 31/229 (13%), Positives = 75/229 (32%), Gaps = 13/229 (5%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSG-SVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
+ ++ + L ++ + ++ G + +L NL ++ +L I +L
Sbjct: 32 RSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTL 91
Query: 61 RNLASLNRVHLEQNHLTGNISEV--------FGIYPNLTFLDISHNNFYGEIWSSWGKCQ 112
++L R++L + D + + +
Sbjct: 92 AKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETIT 151
Query: 113 QLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIV-GEIPIELGNLKSLNYLVLNG-N 170
QL + N + + + L LD S + ++ + E L L +L L+
Sbjct: 152 QLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 211
Query: 171 KLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNL--LKVHYLNLSN 217
+ LG + L+ L + G++ L L+++ + +
Sbjct: 212 DIIPETLLELGEIPTLKTLQVFGIVPDGTLQLLKEALPHLQINCSHFTT 260
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.3 bits (136), Expect = 3e-09
Identities = 21/116 (18%), Positives = 41/116 (35%), Gaps = 10/116 (8%)
Query: 185 ELEYLDLSTNKLSGS-IPETLGNLLKVHYLNLSNNQFR----KEFPVELEKLVQLSELDL 239
+++ LD+ +LS + E L L + + L + K+ L L+EL+L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 240 SHNFLGGEIPPQIC-----NLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYN 290
N LG + ++KL++ + L+G +
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELH 118
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.1 bits (133), Expect = 7e-09
Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 5/83 (6%)
Query: 138 LHKLDFSLNQIVGEIPIEL-GNLKSLNYLVLNGNKLSG----NLPRVLGSLSELEYLDLS 192
+ LD ++ EL L+ + L+ L+ ++ L L L+L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 193 TNKLSGSIPETLGNLLKVHYLNL 215
+N+L + L+ +
Sbjct: 64 SNELGDVGVHCVLQGLQTPSCKI 86
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.1 bits (125), Expect = 7e-08
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 9/85 (10%)
Query: 158 NLKSLNYLVLNGNKLSGN----LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLK---- 209
L L L +S + L L + L LDLS N L + L ++
Sbjct: 367 PGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGC 426
Query: 210 -VHYLNLSNNQFRKEFPVELEKLVQ 233
+ L L + + +E L+ L +
Sbjct: 427 LLEQLVLYDIYWSEEMEDRLQALEK 451
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.0 bits (117), Expect = 7e-07
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 12/95 (12%)
Query: 184 SELEYLDLSTNKLSG----SIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQ-----L 234
S L L L+ +S S+ TL + L+LSNN ++L + V+ L
Sbjct: 369 SVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLL 428
Query: 235 SELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLS 269
+L L + E+ + L++LEK S +S
Sbjct: 429 EQLVLYDIYWSEEMEDR---LQALEKDKPSLRVIS 460
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.7 bits (111), Expect = 3e-06
Identities = 17/80 (21%), Positives = 27/80 (33%), Gaps = 9/80 (11%)
Query: 209 KVHYLNLSNNQFRKE----FPVELEKLVQLSELDLSHNFLGGEIPPQIC-----NLESLE 259
+ L L++ L L ELDLS+N LG Q+ LE
Sbjct: 370 VLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLE 429
Query: 260 KLNVSHNNLSGLIPSCFEGM 279
+L + S + + +
Sbjct: 430 QLVLYDIYWSEEMEDRLQAL 449
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.5 bits (108), Expect = 7e-06
Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 5/74 (6%)
Query: 208 LKVHYLNLSNNQFRKEFPVEL-EKLVQLSELDLSHNFLGGE----IPPQICNLESLEKLN 262
L + L++ + EL L Q + L L I + +L +LN
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 61
Query: 263 VSHNNLSGLIPSCF 276
+ N L + C
Sbjct: 62 LRSNELGDVGVHCV 75
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.7 bits (106), Expect = 1e-05
Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 9/90 (10%)
Query: 105 WSSWGKCQQLGTLNFSMNNITG----SIPPEIGKLYQLHKLDFSLNQIVGEIPIELG--- 157
L L + +++ S+ + + L +LD S N + ++L
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESV 421
Query: 158 --NLKSLNYLVLNGNKLSGNLPRVLGSLSE 185
L LVL S + L +L +
Sbjct: 422 RQPGCLLEQLVLYDIYWSEEMEDRLQALEK 451
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.7 bits (106), Expect = 1e-05
Identities = 11/86 (12%), Positives = 27/86 (31%), Gaps = 9/86 (10%)
Query: 87 YPNLTFLDISHNNFYGE----IWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQ----- 137
L L ++ + + ++ L L+ S N + + ++ + +
Sbjct: 368 GSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCL 427
Query: 138 LHKLDFSLNQIVGEIPIELGNLKSLN 163
L +L E+ L L+
Sbjct: 428 LEQLVLYDIYWSEEMEDRLQALEKDK 453
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.0 bits (104), Expect = 2e-05
Identities = 12/92 (13%), Positives = 24/92 (26%), Gaps = 5/92 (5%)
Query: 89 NLTFLDISHNNFYGEIWSS-WGKCQQLGTLNFSMNNITG----SIPPEIGKLYQLHKLDF 143
++ LDI W+ QQ + +T I + L +L+
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 144 SLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175
N++ + + L
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.6 bits (103), Expect = 3e-05
Identities = 11/66 (16%), Positives = 25/66 (37%), Gaps = 5/66 (7%)
Query: 232 VQLSELDLSHNFLGGEIPPQIC-NLESLEKLNVSHNNLSG----LIPSCFEGMHGLSCID 286
+ + LD+ L ++ L+ + + + L+ I S L+ ++
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 61
Query: 287 ISYNEL 292
+ NEL
Sbjct: 62 LRSNEL 67
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.2 bits (102), Expect = 4e-05
Identities = 16/117 (13%), Positives = 35/117 (29%), Gaps = 10/117 (8%)
Query: 17 NLKGLYLYSNSLSGS-VPGEIGNLMQLTNLEIDNNQL----FGQIPRSLRNLASLNRVHL 71
+++ L + LS + + L Q + +D+ L I +LR +L ++L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 72 EQNHLTGNISEVFG-----IYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNN 123
N L + L + + G + ++
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHL 119
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.7 bits (93), Expect = 5e-04
Identities = 10/89 (11%), Positives = 27/89 (30%), Gaps = 9/89 (10%)
Query: 60 LRNLASLNRVHLEQNHLTGN----ISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQ-- 113
+ + L + L ++ + ++ +L LD+S+N + +
Sbjct: 365 GQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQP 424
Query: 114 ---LGTLNFSMNNITGSIPPEIGKLYQLH 139
L L + + + L +
Sbjct: 425 GCLLEQLVLYDIYWSEEMEDRLQALEKDK 453
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} Length = 460 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (89), Expect = 0.002
Identities = 13/93 (13%), Positives = 29/93 (31%), Gaps = 13/93 (13%)
Query: 62 NLASLNRVHLEQNHLTGN-ISEVFGIYPNLTFLDISHNNFYGE----IWSSWGKCQQLGT 116
++ SL+ ++ L+ +E+ + + + I S+ L
Sbjct: 3 DIQSLD---IQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAE 59
Query: 117 LNFSMNNITGSIPPEIGKLYQ-----LHKLDFS 144
LN N + + + Q + KL
Sbjct: 60 LNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQ 92
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 55.6 bits (132), Expect = 7e-09
Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 10/114 (8%)
Query: 96 SHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIE 155
F + + +L + +N + I L +L+ S N+++ E+P
Sbjct: 244 QSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPAL 302
Query: 156 LGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSG--SIPETLGNL 207
L+ L + N L+ +P + + L+ L + N L IPE++ +L
Sbjct: 303 PPRLERLI---ASFNHLA-EVPELPQN---LKQLHVEYNPLREFPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 52.5 bits (124), Expect = 7e-08
Identities = 30/92 (32%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query: 143 FSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPE 202
+ LN EI SL L ++ NKL LP LE L S N L+ +PE
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELP---ALPPRLERLIASFNHLA-EVPE 321
Query: 203 TLGNLLKVHYLNLSNNQFRKEFPVELEKLVQL 234
NL L++ N R EFP E + L
Sbjct: 322 LPQNL---KQLHVEYNPLR-EFPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 49.8 bits (117), Expect = 6e-07
Identities = 26/92 (28%), Positives = 35/92 (38%), Gaps = 9/92 (9%)
Query: 191 LSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPP 250
N S I + LN+SNN+ E P +L L S N L E+P
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPRL---ERLIASFNHLA-EVPE 321
Query: 251 QICNLESLEKLNVSHNNLSGLIPSCFEGMHGL 282
NL+ L +V +N L P E + L
Sbjct: 322 LPQNLKQL---HVEYNPLREF-PDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 48.3 bits (113), Expect = 2e-06
Identities = 23/117 (19%), Positives = 40/117 (34%), Gaps = 33/117 (28%)
Query: 70 HLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIP 129
N + I + + P+L L++S+N +P
Sbjct: 266 LYYLNASSNEIRSLCDLPPSLEELNVSNNKL-------------------------IELP 300
Query: 130 PEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSEL 186
+ L +L S N + E+P NLK L+ + N L P + S+ +L
Sbjct: 301 ALPPR---LERLIASFNHL-AEVPELPQNLKQLH---VEYNPLRE-FPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 44.8 bits (104), Expect = 2e-05
Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 9/90 (10%)
Query: 1 MNHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSL 60
+N S I +L+ L + +N L +P L L N L ++P
Sbjct: 269 LNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPALPPR---LERLIASFNHL-AEVPELP 323
Query: 61 RNLASLNRVHLEQNHLTGNISEVFGIYPNL 90
+NL L H+E N L ++ +L
Sbjct: 324 QNLKQL---HVEYNPLRE-FPDIPESVEDL 349
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 44.8 bits (104), Expect = 2e-05
Identities = 20/85 (23%), Positives = 31/85 (36%), Gaps = 8/85 (9%)
Query: 211 HYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSG 270
N E + L EL++S+N L E+P LE+L S N+L+
Sbjct: 263 PPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKL-IELPALPPR---LERLIASFNHLAE 318
Query: 271 LIPSCFEGMHGLSCIDISYNELLGL 295
+ L + + YN L
Sbjct: 319 VPEL----PQNLKQLHVEYNPLREF 339
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} Length = 353 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Score = 39.0 bits (89), Expect = 0.001
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 233 QLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
Q EL+L++ L +P +LESL S N+L+ L P + + L + + L
Sbjct: 39 QAHELELNNLGLS-SLPELPPHLESL---VASCNSLTEL-PELPQSLKSLLVDNNNLKAL 93
Query: 293 LGLIPN 298
L P
Sbjct: 94 SDLPPL 99
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 53.5 bits (127), Expect = 1e-08
Identities = 33/204 (16%), Positives = 64/204 (31%), Gaps = 16/204 (7%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQ 73
F L S++ +V L + + +N+ + ++ L ++ ++ L
Sbjct: 22 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNG 77
Query: 74 NHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIG 133
N LT NL L + S K + +N I +
Sbjct: 78 NKLTDIK-----PLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVH 132
Query: 134 KLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLST 193
+ + L L +L+ + + L L++L+ L LS
Sbjct: 133 LPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP-----LAGLTKLQNLYLSK 187
Query: 194 NKLSGSIPETLGNLLKVHYLNLSN 217
N +S + L L + L L +
Sbjct: 188 NHIS-DLRA-LAGLKNLDVLELFS 209
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 45.8 bits (107), Expect = 5e-06
Identities = 34/194 (17%), Positives = 72/194 (37%), Gaps = 26/194 (13%)
Query: 112 QQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNK 171
+ N ++T ++ +L + ++ + + I I+ L ++ L LNGNK
Sbjct: 24 AETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIKSVQGIQ--YLPNVTKLFLNGNK 79
Query: 172 LSGNLPRVLGSLSELEYLDLSTNKLS-----------------GSIPETLGNLLKVHYLN 214
L+ + L +L L +L L NK+ + + L+ + L
Sbjct: 80 LTDI--KPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLE 137
Query: 215 LSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPS 274
K + + + + + +I P + L L+ L +S N++S L
Sbjct: 138 SLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDL--R 194
Query: 275 CFEGMHGLSCIDIS 288
G+ L +++
Sbjct: 195 ALAGLKNLDVLELF 208
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 43.8 bits (102), Expect = 2e-05
Identities = 41/216 (18%), Positives = 72/216 (33%), Gaps = 22/216 (10%)
Query: 31 SVPGEIGNLMQLTNLE------IDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVF 84
+VP I + + + + ++ L S++++ + +
Sbjct: 9 TVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIKSVQG--I 64
Query: 85 GIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFS 144
PN+T L ++ N + K L+ + S+ S
Sbjct: 65 QYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLK------DLKKLKSLS 118
Query: 145 LNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETL 204
L L +L L L L NK++ L++L+ L L N++S +P L
Sbjct: 119 LEHNGISDINGLVHLPQLESLYLGNNKITDITVLS--RLTKLDTLSLEDNQISDIVP--L 174
Query: 205 GNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLS 240
L K+ L LS N L L L L+L
Sbjct: 175 AGLTKLQNLYLSKNHISD--LRALAGLKNLDVLELF 208
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 39.2 bits (90), Expect = 6e-04
Identities = 30/158 (18%), Positives = 55/158 (34%), Gaps = 12/158 (7%)
Query: 12 VGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHL 71
+ N+ L+L N L+ L NL+ + + +
Sbjct: 64 IQYLPNVTKLFLNGNKLTDI--------KPLANLKNLGWLFLDENKVKDLSSLKDLKKLK 115
Query: 72 EQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPE 131
+ IS++ G+ + N + + +L TL+ N I+ +P
Sbjct: 116 SLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP-- 173
Query: 132 IGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNG 169
+ L +L L S N I ++ L LK+L+ L L
Sbjct: 174 LAGLTKLQNLYLSKNHI-SDLR-ALAGLKNLDVLELFS 209
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 39.2 bits (90), Expect = 7e-04
Identities = 34/217 (15%), Positives = 73/217 (33%), Gaps = 25/217 (11%)
Query: 50 NQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWG 109
Q+F S A + +L++ +T +++ ++ + ++++ I S G
Sbjct: 15 KQIF-----SDDAFAETIKDNLKKKSVTDAVTQNE--LNSIDQIIANNSD----IKSVQG 63
Query: 110 --KCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVL 167
+ L + N +T + L L L N++ ++ + L
Sbjct: 64 IQYLPNVTKLFLNGNKLTD--IKPLANLKNLGWLFLDENKVKDLSSLK-------DLKKL 114
Query: 168 NGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVE 227
L N + L L L+ + T+ + L + +
Sbjct: 115 KSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIV-P 173
Query: 228 LEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVS 264
L L +L L LS N + + L++L+ L +
Sbjct: 174 LAGLTKLQNLYLSKNHISD--LRALAGLKNLDVLELF 208
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 50.9 bits (121), Expect = 2e-08
Identities = 28/109 (25%), Positives = 41/109 (37%), Gaps = 6/109 (5%)
Query: 164 YLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKE 223
L L L+ L L + +LDLS N+L P L L + L + E
Sbjct: 2 VLHLAHKDLTV--LCHLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQ--ASDNALE 56
Query: 224 FPVELEKLVQLSELDLSHNFL-GGEIPPQICNLESLEKLNVSHNNLSGL 271
+ L +L EL L +N L + + L LN+ N+L
Sbjct: 57 NVDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 105
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 47.8 bits (113), Expect = 2e-07
Identities = 28/124 (22%), Positives = 44/124 (35%), Gaps = 9/124 (7%)
Query: 70 HLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIP 129
HL LT + +T LD+SHN + + + L L S N +
Sbjct: 4 HLAHKDLT--VLCHLEQLLLVTHLDLSHNRLRA-LPPALAALRCLEVLQASDNALE--NV 58
Query: 130 PEIGKLYQLHKLDFSLNQIVG-EIPIELGNLKSLNYLVLNGNKLS---GNLPRVLGSLSE 185
+ L +L +L N++ L + L L L GN L G R+ L
Sbjct: 59 DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPS 118
Query: 186 LEYL 189
+ +
Sbjct: 119 VSSI 122
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 37.4 bits (86), Expect = 0.001
Identities = 19/118 (16%), Positives = 37/118 (31%), Gaps = 29/118 (24%)
Query: 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQL------------------- 42
L+ + + + L L N L P + L L
Sbjct: 8 KDLT--VLCHLEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALENVDGVANL 64
Query: 43 ---TNLEIDNNQLFG-QIPRSLRNLASLNRVHLEQNHLT---GNISEVFGIYPNLTFL 93
L + NN+L + L + L ++L+ N L G + + P+++ +
Sbjct: 65 PRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 122
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 51.3 bits (121), Expect = 5e-08
Identities = 36/179 (20%), Positives = 60/179 (33%), Gaps = 8/179 (4%)
Query: 65 SLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEI-WSSWGKCQQLGTLNFSMNN 123
V L I I + T L ++ N +G+ L L N
Sbjct: 9 EGTTVDCTGRGLK-EIPR--DIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQ 65
Query: 124 ITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSL 183
+TG P + +L N+I L L L L N++S +P L
Sbjct: 66 LTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHL 125
Query: 184 SELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHN 242
+ L L+L++N + + + +L+ R P K+ + DL H+
Sbjct: 126 NSLTSLNLASNPFNCNCHLA-WFAEWLRKKSLNGGAARCGAP---SKVRDVQIKDLPHS 180
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 192 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 41.7 bits (96), Expect = 8e-05
Identities = 42/187 (22%), Positives = 71/187 (37%), Gaps = 8/187 (4%)
Query: 116 TLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIEL-GNLKSLNYLVLNGNKLSG 174
T++ + + IP +I +L + N++ L G L L L L N+L+G
Sbjct: 12 TVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTG 68
Query: 175 NLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQL 234
P S ++ L L NK+ + L ++ LNL +NQ P E L L
Sbjct: 69 IEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSL 128
Query: 235 SELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLG 294
+ L+ + E L K +++ PS + + D+ ++E
Sbjct: 129 TSLN-LASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS---KVRDVQIKDLPHSEFKC 184
Query: 295 LIPNSTG 301
NS G
Sbjct: 185 SSENSEG 191
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.2 bits (123), Expect = 5e-08
Identities = 38/223 (17%), Positives = 63/223 (28%), Gaps = 9/223 (4%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNL--MQLTNLEIDNNQLFGQIPRSLRNLA 64
IP + N L L G ++ + ++ +
Sbjct: 22 EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 79
Query: 65 SLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM--N 122
+ N+L E F PNL +L IS+ Q L+ N
Sbjct: 80 LHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNIN 139
Query: 123 NITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGS 182
T +G ++ L + N I + + + N L V
Sbjct: 140 IHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHG 199
Query: 183 LSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFP 225
S LD+S ++ L NL K+ + N K+ P
Sbjct: 200 ASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL---KKLP 239
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.2 bits (97), Expect = 1e-04
Identities = 33/238 (13%), Positives = 59/238 (24%), Gaps = 10/238 (4%)
Query: 17 NLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHL 76
+ + + ++ +P ++ L +L + L ++ + QN +
Sbjct: 9 SNRVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 65
Query: 77 TGNISEVFGIYPNLTF--LDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGK 134
I NN ++ L L S I
Sbjct: 66 LEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIH 125
Query: 135 LYQLHKLDFSL--NQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLS 192
Q LD N E +G L LN N + E
Sbjct: 126 SLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSD 185
Query: 193 TNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPP 250
N L + L++S + LE L +L + ++P
Sbjct: 186 NNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL---KKLPT 240
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.0 bits (94), Expect = 2e-04
Identities = 31/247 (12%), Positives = 57/247 (23%), Gaps = 26/247 (10%)
Query: 49 NNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSW 108
+IP L + + L F + +L ++IS N+ I +
Sbjct: 16 QESKVTEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADV 73
Query: 109 GKCQQLGT--LNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLV 166
NN+ P L L L S I + +
Sbjct: 74 FSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVL-- 131
Query: 167 LNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPV 226
+ + N + +G + L L+ N ++
Sbjct: 132 --------------------LDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNC 171
Query: 227 ELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCID 286
+N L L++S + L E + L
Sbjct: 172 AFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARS 231
Query: 287 ISYNELL 293
+ L
Sbjct: 232 TYNLKKL 238
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.8 bits (118), Expect = 1e-07
Identities = 23/146 (15%), Positives = 47/146 (32%), Gaps = 6/146 (4%)
Query: 167 LNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPV 226
L ++ L ++ + L L L LN ++ +
Sbjct: 4 LKPEQVE-QLKLIMSKRYDGSQQALDLKGLR--SDPDLVAQNIDVVLNRRSS-MAATLRI 59
Query: 227 ELEKLVQLSELDLSHNFLGG--EIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSC 284
E + +L L+LS+N L ++ + +L+ LN+S N L L
Sbjct: 60 IEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEE 119
Query: 285 IDISYNELLGLIPNSTGFQYDPIQAL 310
+ + N L + + + +
Sbjct: 120 LWLDGNSLSDTFRDQSTYISAIRERF 145
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.1 bits (111), Expect = 9e-07
Identities = 31/153 (20%), Positives = 53/153 (34%), Gaps = 18/153 (11%)
Query: 109 GKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLN 168
K + + P++ L+ + + I N+ L L L+
Sbjct: 17 SKRYDGSQQALDLKGLR--SDPDLVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLS 73
Query: 169 GNKLSG--NLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPV 226
N+L ++ ++ L+ L+LS N+L LK+ L L N F
Sbjct: 74 NNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRD 133
Query: 227 E-------LEKLVQLSELDLSHNFLGGEIPPQI 252
+ E+ +L LD G E+PP I
Sbjct: 134 QSTYISAIRERFPKLLRLD------GHELPPPI 160
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.6 bits (107), Expect = 3e-06
Identities = 28/141 (19%), Positives = 57/141 (40%), Gaps = 8/141 (5%)
Query: 138 LHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLS 197
L++L + V ++ + + + L+ L L + + L+ + ++
Sbjct: 1 LNELK---PEQVEQLKLIMSKRYDGSQQALDLKGL--RSDPDLVAQNIDVVLNRR-SSMA 54
Query: 198 GSIPETLGNLLKVHYLNLSNNQFRK--EFPVELEKLVQLSELDLSHNFLGGEIPPQICNL 255
++ N+ ++ LNLSNN+ + + ++K L L+LS N L E
Sbjct: 55 ATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKG 114
Query: 256 ESLEKLNVSHNNLSGLIPSCF 276
LE+L + N+LS
Sbjct: 115 LKLEELWLDGNSLSDTFRDQS 135
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.6 bits (94), Expect = 2e-04
Identities = 24/148 (16%), Positives = 50/148 (33%), Gaps = 7/148 (4%)
Query: 31 SVPGEIGNLMQLTNLEIDNNQL-FGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPN 89
+ + + +D L + LNR ++ + + + P
Sbjct: 11 QLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR----RSSMAATLRIIEENIPE 66
Query: 90 LTFLDISHNNFYG--EIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQ 147
L L++S+N Y ++ S K L LN S N + + K +L +L N
Sbjct: 67 LLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNS 126
Query: 148 IVGEIPIELGNLKSLNYLVLNGNKLSGN 175
+ + + ++ +L G+
Sbjct: 127 LSDTFRDQSTYISAIRERFPKLLRLDGH 154
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 49.1 bits (115), Expect = 8e-07
Identities = 33/302 (10%), Positives = 83/302 (27%), Gaps = 31/302 (10%)
Query: 7 AIPPSVGNFTNLKGLYLYSNSLSG----SVPGEIGNLMQLTNLEIDNNQLF---GQIPRS 59
++ + ++K + L N++ + I + L E + +IP +
Sbjct: 22 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEA 81
Query: 60 LRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNF 119
LR L + + + + + +S + ++
Sbjct: 82 LRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKI 141
Query: 120 SMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRV 179
+ ++ + L + N++ E + L+ + +
Sbjct: 142 ARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPE 201
Query: 180 LGSLSELEYLD-------------LSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPV 226
LE L T+ S ++ L + + L L++
Sbjct: 202 GIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 261
Query: 227 EL------EKLVQLSELDLSHNFLGGEIPPQIC-----NLESLEKLNVSHNNLSGLIPSC 275
+ + + L L L +N + + + + L L ++ N S
Sbjct: 262 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVV 321
Query: 276 FE 277
E
Sbjct: 322 DE 323
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 40.6 bits (93), Expect = 4e-04
Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 5/89 (5%)
Query: 208 LKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGE----IPPQICNLESLEKLNV 263
+ ++ K L + + E+ LS N +G E + I + + LE
Sbjct: 8 KSLKLDAITTEDE-KSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEF 66
Query: 264 SHNNLSGLIPSCFEGMHGLSCIDISYNEL 292
S + E + L + +L
Sbjct: 67 SDIFTGRVKDEIPEALRLLLQALLKCPKL 95
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 39.5 bits (90), Expect = 0.001
Identities = 20/91 (21%), Positives = 31/91 (34%), Gaps = 19/91 (20%)
Query: 167 LNGNKLSGNLPRVLG------SLSELEYLDLSTNKLSGSIPETL-----GNLLKVHYLNL 215
LN LS + L+ L L N++ TL + + +L L
Sbjct: 250 LNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLEL 309
Query: 216 SNNQFRKEFPV--------ELEKLVQLSELD 238
+ N+F +E V +L ELD
Sbjct: 310 NGNRFSEEDDVVDEIREVFSTRGRGELDELD 340
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 39.1 bits (89), Expect = 0.001
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 7/82 (8%)
Query: 140 KLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN----LPRVLGSLSELEYLDLSTN- 194
KLD + + L S+ +VL+GN + L + S +LE + S
Sbjct: 11 KLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIF 70
Query: 195 --KLSGSIPETLGNLLKVHYLN 214
++ IPE L LL+
Sbjct: 71 TGRVKDEIPEALRLLLQALLKC 92
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 38.7 bits (88), Expect = 0.002
Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 5/89 (5%)
Query: 160 KSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSG----SIPETLGNLLKVHYLNL 215
KSL + ++ VL ++ + LS N + + E + + +
Sbjct: 8 KSLKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEF 66
Query: 216 SNNQFRKEFPVELEKLVQLSELDLSHNFL 244
S+ + E L L + L L
Sbjct: 67 SDIFTGRVKDEIPEALRLLLQALLKCPKL 95
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 37.9 bits (86), Expect = 0.003
Identities = 11/69 (15%), Positives = 25/69 (36%), Gaps = 7/69 (10%)
Query: 153 PIELGNLKSLNYLVLNGNKLSGNLPRVLGS-----LSELEYLDLSTNKLS--GSIPETLG 205
L L L N++ + R L + + +L +L+L+ N+ S + + +
Sbjct: 266 AFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIR 325
Query: 206 NLLKVHYLN 214
+
Sbjct: 326 EVFSTRGRG 334
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.1 bits (108), Expect = 2e-06
Identities = 22/139 (15%), Positives = 44/139 (31%), Gaps = 7/139 (5%)
Query: 10 PSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRV 69
N + L L + + L Q ++ +N++ L L +
Sbjct: 12 AQYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKLDGFP--LLRRLKTL 68
Query: 70 HLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIP 129
+ N + + P+LT L +++N+ + T + N +
Sbjct: 69 LVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKK 128
Query: 130 PE----IGKLYQLHKLDFS 144
I K+ Q+ LDF
Sbjct: 129 HYRLYVIYKVPQVRVLDFQ 147
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.0 bits (100), Expect = 2e-05
Identities = 27/138 (19%), Positives = 44/138 (31%), Gaps = 7/138 (5%)
Query: 59 SLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLN 118
N + L + I + +D S N + ++L TL
Sbjct: 13 QYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR--KLDGFPLLRRLKTLL 69
Query: 119 FSMNNITGSIPPEIGKLYQLHKLDFSLNQIVG-EIPIELGNLKSLNYLVLNGNK---LSG 174
+ N I L L +L + N +V L +LKSL YL + N
Sbjct: 70 VNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKH 129
Query: 175 NLPRVLGSLSELEYLDLS 192
V+ + ++ LD
Sbjct: 130 YRLYVIYKVPQVRVLDFQ 147
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.9 bits (92), Expect = 3e-04
Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Query: 231 LVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYN 290
V+ ELDL + I L+ + ++ S N + L F + L + ++ N
Sbjct: 17 AVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNN 73
Query: 291 ELLGLIPN 298
+ +
Sbjct: 74 RICRIGEG 81
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} Length = 162 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.5 bits (83), Expect = 0.003
Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 7/134 (5%)
Query: 111 CQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGN 170
+ L+ I I L Q +DFS N+I L+ L L++N N
Sbjct: 17 AVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIRKLDGFP--LLRRLKTLLVNNN 73
Query: 171 KLSGNLPRVLGSLSELEYLDLSTNKLSG-SIPETLGNLLKVHYLNLSNNQFRKE---FPV 226
++ + +L +L L L+ N L + L +L + YL + N +
Sbjct: 74 RICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLY 133
Query: 227 ELEKLVQLSELDLS 240
+ K+ Q+ LD
Sbjct: 134 VIYKVPQVRVLDFQ 147
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 43.5 bits (101), Expect = 2e-05
Identities = 41/181 (22%), Positives = 65/181 (35%), Gaps = 14/181 (7%)
Query: 9 PPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNR 68
S + + L + S+ G + L LT + NNQL P
Sbjct: 33 TVSQTDLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDITP------LKNLT 84
Query: 69 VHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSI 128
++ I+++ + ++ N L L S N I+
Sbjct: 85 KLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTIS--D 142
Query: 129 PPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEY 188
+ L L +L+FS NQ+ P L NL +L L ++ NK+S VL L+ LE
Sbjct: 143 ISALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKVSD--ISVLAKLTNLES 198
Query: 189 L 189
L
Sbjct: 199 L 199
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 42.0 bits (97), Expect = 8e-05
Identities = 45/200 (22%), Positives = 78/200 (39%), Gaps = 16/200 (8%)
Query: 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQ 73
L +++ +V +L Q+T L+ D + +S+ + LN +L Q
Sbjct: 16 ALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGI-----KSIDGVEYLN--NLTQ 66
Query: 74 NHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIG 133
+ + N NLT L N + T ++ N + +
Sbjct: 67 INFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLT-GLTLFNNQITDIDPLK 125
Query: 134 KLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLST 193
L L++L+ S N I + L SL L + N+++ P L +L+ LE LD+S+
Sbjct: 126 NLTNLNRLELSSNTISDISALS--GLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISS 181
Query: 194 NKLSGSIPETLGNLLKVHYL 213
NK+S L L + L
Sbjct: 182 NKVSD--ISVLAKLTNLESL 199
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} Length = 199 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Score = 39.6 bits (91), Expect = 4e-04
Identities = 30/202 (14%), Positives = 68/202 (33%), Gaps = 20/202 (9%)
Query: 38 NLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGI--YPNLTFLDI 95
L + + + + ++ +L + + ++ I + G+ NLT ++
Sbjct: 16 ALAEKMKTVLGKTNVTDTVSQT--DLDQVTTLQADRL----GIKSIDGVEYLNNLTQINF 69
Query: 96 SHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIE 155
S+N +N + + + + +
Sbjct: 70 SNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTN 129
Query: 156 LGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNL 215
L L+ + + + + LSG + L+ S+N+++ P L NL + L++
Sbjct: 130 LNRLELSSNTISDISALSGLTSL--------QQLNFSSNQVTDLKP--LANLTTLERLDI 179
Query: 216 SNNQFRKEFPVELEKLVQLSEL 237
S+N+ L KL L L
Sbjct: 180 SSNKVSD--ISVLAKLTNLESL 199
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.9 bits (99), Expect = 2e-05
Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 2/106 (1%)
Query: 213 LNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQIC-NLESLEKLNVSHNNLSGL 271
L + + + L L+EL + + + + L L L + + L +
Sbjct: 13 LRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFV 71
Query: 272 IPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLC 317
P F LS +++S+N L L + L GN C
Sbjct: 72 APDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHC 117
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.1 bits (97), Expect = 5e-05
Identities = 26/156 (16%), Positives = 50/156 (32%), Gaps = 4/156 (2%)
Query: 10 PSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPR-SLRNLASLNR 68
P GL + + LT L I+N Q + LR L L
Sbjct: 2 PDACCPHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRN 60
Query: 69 VHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSI 128
+ + ++ L + F P L+ L++S N + + L L S N + S
Sbjct: 61 LTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLHCSC 119
Query: 129 PPE-IGKLYQLHKLDFSLNQIVGEIPIELGNLKSLN 163
+ + + ++ L ++ + +
Sbjct: 120 ALRWLQRWEEEGLGGVPEQKLQCHGQGPLAHMPNAS 155
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 156 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.5 bits (93), Expect = 1e-04
Identities = 23/147 (15%), Positives = 42/147 (28%), Gaps = 4/147 (2%)
Query: 111 CQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIEL-GNLKSLNYLVLNG 169
L + + + L +L Q + + + L L L +
Sbjct: 7 PHGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVK 65
Query: 170 NKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFR-KEFPVEL 228
+ L P L L+LS N L S+ L + L LS N L
Sbjct: 66 SGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLHCSCALRWL 124
Query: 229 EKLVQLSELDLSHNFLGGEIPPQICNL 255
++ + + L + ++
Sbjct: 125 QRWEEEGLGGVPEQKLQCHGQGPLAHM 151
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 198 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Score = 38.1 bits (87), Expect = 0.001
Identities = 28/160 (17%), Positives = 48/160 (30%), Gaps = 22/160 (13%)
Query: 2 NHLSGAIPP------SVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQ 55
L G IPP ++ K L L +N++ +I +L + NL I +
Sbjct: 28 VELHGMIPPIEKMDATLSTLKACKHLALSTNNIE-----KISSLSGMENLRILSLGRNLI 82
Query: 56 IPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEI-WSSWGKCQQL 114
+ + L ++ NL L +S+N +L
Sbjct: 83 KKIENLDAVADTLEELWISYNQIASLSGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKL 142
Query: 115 GTLNFSMNNITGSIPPE----------IGKLYQLHKLDFS 144
L + N + + +L L KLD
Sbjct: 143 EDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLDGM 182
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 673 | |||
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.96 | |
| d1ogqa_ | 313 | Polygalacturonase inhibiting protein PGIP {Kidney | 99.96 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.95 | |
| d1xkua_ | 305 | Decorin {Cow (Bos taurus) [TaxId: 9913]} | 99.95 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.95 | |
| d2omza2 | 384 | Internalin A {Listeria monocytogenes [TaxId: 1639] | 99.94 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.94 | |
| d1ozna_ | 284 | Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Huma | 99.93 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.9 | |
| d1p9ag_ | 266 | von Willebrand factor binding domain of glycoprote | 99.9 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.89 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.8 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.8 | |
| d1h6ua2 | 227 | Internalin H {Listeria monocytogenes [TaxId: 1639] | 99.8 | |
| d1xwdc1 | 242 | Follicle-stimulating hormone receptor {Human (Homo | 99.79 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.77 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.76 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.76 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.76 | |
| d1h6ta2 | 210 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.75 | |
| d1w8aa_ | 192 | Slit {Fruit fly (Drosophila melanogaster) [TaxId: | 99.75 | |
| d2omxa2 | 199 | Internalin B {Listeria monocytogenes [TaxId: 1639] | 99.74 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.69 | |
| d1jl5a_ | 353 | Leucine rich effector protein YopM {Yersinia pesti | 99.68 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.64 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.63 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.62 | |
| d1z7xw1 | 460 | Ribonuclease inhibitor {Human (Homo sapiens) [TaxI | 99.62 | |
| d2ca6a1 | 344 | Rna1p (RanGAP1), N-terminal domain {Fission yeast | 99.62 | |
| d2astb2 | 284 | Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sa | 99.59 | |
| d1a9na_ | 162 | Splicesomal U2A' protein {Human (Homo sapiens) [Ta | 99.57 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.55 | |
| d1dcea3 | 124 | Rab geranylgeranyltransferase alpha-subunit, C-ter | 99.52 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.42 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.39 | |
| d1m9la_ | 198 | Outer arm dynein light chain 1 {Green algae (Chlam | 99.39 | |
| d2ifga3 | 156 | High affinity nerve growth factor receptor, N-term | 99.35 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 98.57 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.55 | |
| d1koha1 | 162 | mRNA export factor tap {Human (Homo sapiens) [TaxI | 98.55 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 98.18 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 98.12 | |
| d1pgva_ | 167 | Tropomodulin C-terminal domain {nematode (Caenorha | 98.03 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.75 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 97.68 | |
| d1io0a_ | 166 | Tropomodulin C-terminal domain {Chicken (Gallus ga | 97.61 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 97.1 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 96.76 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 96.5 |
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-52 Score=410.44 Aligned_cols=248 Identities=27% Similarity=0.449 Sum_probs=212.2
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|+.+ +|+.||+|++......+....+.+.+|++++++++|||||++++++.+++..++||
T Consensus 6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm 85 (263)
T d2j4za1 6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 85 (263)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence 46889999999999999999875 68999999997665555556778999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+|.....
T Consensus 86 Ey~~~g~L~~~l~~~~---~l~e~~~~~i~~qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~- 158 (263)
T d2j4za1 86 EYAPLGTVYRELQKLS---KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS- 158 (263)
T ss_dssp ECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCSCSCCCC-
T ss_pred eecCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeeeeccccceecCCCCEeecccceeeecCC-
Confidence 9999999999998653 489999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+..
T Consensus 159 -~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--------~~~~~~i~~~~~~~p~~--- 226 (263)
T d2j4za1 159 -SRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY--------QETYKRISRVEFTFPDF--- 226 (263)
T ss_dssp -CCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHTTCCCCCTT---
T ss_pred -CcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCH--------HHHHHHHHcCCCCCCcc---
Confidence 234567899999999999999999999999999999999999999974322 11222233333333322
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.++.+++.+||+.||++|||++|+++
T Consensus 227 -~s~~~~~li~~~L~~dp~~R~t~~eil~ 254 (263)
T d2j4za1 227 -VTEGARDLISRLLKHNPSQRPMLREVLE 254 (263)
T ss_dssp -SCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -CCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence 2345889999999999999999999985
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-51 Score=410.36 Aligned_cols=249 Identities=25% Similarity=0.386 Sum_probs=209.6
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|.. .+|+.||||+++..... ..+.+.+|++++++++|||||++++++.+++..++||
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 96 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS---CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccCh---HHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEE
Confidence 4799999999999999999976 46999999998754322 3567899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++... .+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 97 Ey~~gg~L~~~~~~~----~l~~~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~ 169 (293)
T d1yhwa1 97 EYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (293)
T ss_dssp ECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCcHHHeEECCCCcEeeccchhheeeccc
Confidence 999999999988764 488999999999999999999999 9999999999999999999999999999988666
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........||+.|+|||++.+..++.++||||+||++|||++|+.||......+.... ......+.+. .+.
T Consensus 170 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~-----~~~~~~~~~~----~~~ 240 (293)
T d1yhwa1 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL-----IATNGTPELQ----NPE 240 (293)
T ss_dssp TCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH-----HHHHCSCCCS----SGG
T ss_pred cccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHH-----HHhCCCCCCC----Ccc
Confidence 5556677899999999999999999999999999999999999999974332211100 0000011111 122
Q ss_pred HHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.++.+++.+||+.||++|||++|+++
T Consensus 241 ~~s~~~~~li~~~L~~dP~~R~s~~eil~ 269 (293)
T d1yhwa1 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (293)
T ss_dssp GSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 33456889999999999999999999875
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.5e-52 Score=410.51 Aligned_cols=257 Identities=25% Similarity=0.402 Sum_probs=201.8
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.++|++.+.||+|+||+||+|+++ ..||||+++..... ....+.|.+|++++++++|||||+++|++.+ +..++||
T Consensus 7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~ 82 (276)
T d1uwha_ 7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPT-PQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVT 82 (276)
T ss_dssp TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCC-TTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEE
Confidence 367999999999999999999874 36999998754333 3457889999999999999999999999865 4679999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ ..+++..+..++.|||+||+|||++ +|+||||||+||+++.++.+||+|||+|+.....
T Consensus 83 Ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~gl~yLH~~---~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~ 157 (276)
T d1uwha_ 83 QWCEGSSLYHHLHIIE--TKFEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 157 (276)
T ss_dssp ECCCEEEHHHHHHTSC--CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTSSEEECCCCCSCC----
T ss_pred ecCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHhcC---CEeccccCHHHEEEcCCCCEEEccccceeecccc
Confidence 9999999999997654 4589999999999999999999999 9999999999999999999999999999876433
Q ss_pred C--CCceeccccccccccccccc---CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC
Q 005864 561 S--SNWTEFAGTFGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635 (673)
Q Consensus 561 ~--~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
. .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||........... ........+...
T Consensus 158 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~---~~~~~~~~p~~~-- 232 (276)
T d1uwha_ 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF---MVGRGYLSPDLS-- 232 (276)
T ss_dssp --------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH---HHHHTSCCCCGG--
T ss_pred CCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHH---HHhcCCCCCcch--
Confidence 2 23345679999999999864 3589999999999999999999999974332111000 000111111111
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
......+.++.+++.+||+.||++||||+|+++.|+
T Consensus 233 -~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le 268 (276)
T d1uwha_ 233 -KVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE 268 (276)
T ss_dssp -GSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred -hccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 111223456899999999999999999999999886
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-52 Score=408.61 Aligned_cols=251 Identities=25% Similarity=0.416 Sum_probs=197.7
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
++|++.+.||+|+||+||+|++.+++.||||+++.... ..++|.+|++++++++|||||+++|+|.+++..++|||
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~----~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E 80 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE 80 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSSSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCCcC----cHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEE
Confidence 46888899999999999999998899999999875432 24679999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++.... ..+++..+..++.|||+||+|||++ +|+||||||+||++++++.+||+|||+++......
T Consensus 81 ~~~~g~L~~~l~~~~--~~~~~~~~~~i~~qia~gl~~lH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~ 155 (263)
T d1sm2a_ 81 FMEHGCLSDYLRTQR--GLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 155 (263)
T ss_dssp CCTTCBHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCTTCSGGGEEECGGGCEEECSCC---------
T ss_pred ecCCCcHHHHhhccc--cCCCHHHHHHHHHHHHHHHHhhhcc---ceeecccchhheeecCCCCeEecccchheeccCCC
Confidence 999999999987654 4588999999999999999999999 99999999999999999999999999998765433
Q ss_pred CC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhC-CCCCcccccccccccccccccccccCC-CCCCCCcc
Q 005864 562 SN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKG-KHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPSRN 638 (673)
Q Consensus 562 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 638 (673)
.. .....||+.|+|||++.+..++.++|||||||++|||+|+ +.||......+ ....+... +...+.
T Consensus 156 ~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~--------~~~~i~~~~~~~~p~-- 225 (263)
T d1sm2a_ 156 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE--------VVEDISTGFRLYKPR-- 225 (263)
T ss_dssp ---------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHH--------HHHHHHHTCCCCCCT--
T ss_pred ceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHH--------HHHHHHhcCCCCCcc--
Confidence 22 2346789999999999999999999999999999999995 55554221110 11111111 111121
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+.++.+++.+||+.||++||||+||++.|++
T Consensus 226 --~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~ 258 (263)
T d1sm2a_ 226 --LASTHVYQIMNHCWKERPEDRPAFSRLLRQLAE 258 (263)
T ss_dssp --TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --ccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 223468899999999999999999999999863
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=9.1e-52 Score=413.68 Aligned_cols=252 Identities=28% Similarity=0.474 Sum_probs=195.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCC---EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGE---VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~---~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
++|++.+.||+|+||+||+|+++ +|+ .||||++.... .....++|.+|+++|++++|||||+++|+|.+++..+
T Consensus 26 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~ 103 (299)
T d1jpaa_ 26 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY--TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVM 103 (299)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred hhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc--CHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 34566789999999999999875 333 58899876542 2335678999999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+|||||++|+|.+++.... ..++|.++..++.|||+||+|||++ +|+||||||+|||++.++.+||+|||+++.+
T Consensus 104 iv~Ey~~~g~L~~~~~~~~--~~l~~~~~~~i~~qia~gl~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~ 178 (299)
T d1jpaa_ 104 IITEFMENGSLDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFL 178 (299)
T ss_dssp EEEECCTTEEHHHHHHTTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEEEecCCCcceeeecccc--CCCCHHHHHHHHHHHHHHHHHHhhC---CCccCccccceEEECCCCcEEECCcccceEc
Confidence 9999999999999988654 4589999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCCc-----eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccccccc-CC
Q 005864 558 KPGSSNW-----TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEIL-DP 630 (673)
Q Consensus 558 ~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~-~~ 630 (673)
....... ....||+.|+|||.+.+..++.++|||||||++|||+| |+.||......+ ....+. ..
T Consensus 179 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~--------~~~~i~~~~ 250 (299)
T d1jpaa_ 179 EDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD--------VINAIEQDY 250 (299)
T ss_dssp -----------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------HHHHHHTTC
T ss_pred cCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHH--------HHHHHHcCC
Confidence 5433221 22457899999999999999999999999999999998 899987433211 111111 11
Q ss_pred CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 631 RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 631 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+++.+. ..+.++.+++.+||+.||++||||+||++.|+
T Consensus 251 ~~~~~~----~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~ 288 (299)
T d1jpaa_ 251 RLPPPM----DCPSALHQLMLDCWQKDRNHRPKFGQIVNTLD 288 (299)
T ss_dssp CCCCCT----TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCCCCc----cchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 222222 23446889999999999999999999999886
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-52 Score=408.29 Aligned_cols=251 Identities=25% Similarity=0.343 Sum_probs=203.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|++. +|+.||||++..... ....+.+.+|++++++++|||||++++++.+++..++||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivm 82 (271)
T d1nvra_ 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 82 (271)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEE
Confidence 56899999999999999999774 699999999875432 223567899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++... ..+++.++..++.||++||+|||++ +|+||||||+||++++++.+||+|||+|+.....
T Consensus 83 Ey~~gg~L~~~l~~~---~~l~e~~~~~i~~qi~~al~ylH~~---~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~ 156 (271)
T d1nvra_ 83 EYCSGGELFDRIEPD---IGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 156 (271)
T ss_dssp ECCTTEEGGGGSBTT---TBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECEET
T ss_pred eccCCCcHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHc---CCccCcccHHHEEECCCCCEEEccchhheeeccC
Confidence 999999999999764 3589999999999999999999999 9999999999999999999999999999976433
Q ss_pred C--CCceecccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 561 S--SNWTEFAGTFGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 561 ~--~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
. .......||+.|+|||++.+..+ +.++||||+||++|||++|+.||....... ............. .
T Consensus 157 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~-------~~~~~~~~~~~~~--~ 227 (271)
T d1nvra_ 157 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-------QEYSDWKEKKTYL--N 227 (271)
T ss_dssp TEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTS-------HHHHHHHTTCTTS--T
T ss_pred CccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHH-------HHHHHHhcCCCCC--C
Confidence 2 23355789999999999988876 578999999999999999999997432111 0111111111111 1
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+...+.++.+++.+||+.||++|||++|+++
T Consensus 228 ~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 259 (271)
T d1nvra_ 228 PWKKIDSAPLALLHKILVENPSARITIPDIKK 259 (271)
T ss_dssp TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 12233456889999999999999999999975
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-52 Score=408.54 Aligned_cols=256 Identities=22% Similarity=0.329 Sum_probs=196.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--CCeeeE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH--PRHSFL 478 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~l 478 (673)
++|++.+.||+|+||+||+|+.. +|+.||||.+...... ....+.+.+|++++++++|||||++++++.+ ++..++
T Consensus 4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i 82 (269)
T d2java1 4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 82 (269)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSC-HHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCC-HHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence 57999999999999999999764 6999999998765433 3346789999999999999999999999865 456899
Q ss_pred EEecccCCChHHHHhcCC-CCccchHHHHHHHHHHHHHHHHHHhhcCC--CCeEEecCCCCCeEeCCCCceEEeccccee
Q 005864 479 VYECLERGSLAEILSNDG-SIKEFSWIVRTNVIKSVANALSYMHHDCF--PPIVHRDISSKNVLLSSEYEARVSDFGIAK 555 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~l~~LH~~~~--~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 555 (673)
||||+++|+|.+++.... ....+++..++.++.|++.||+|||+.+. .+|+||||||+|||++.++.+||+|||+++
T Consensus 83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~ 162 (269)
T d2java1 83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 162 (269)
T ss_dssp EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHH
T ss_pred EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecccee
Confidence 999999999999986532 22458999999999999999999999721 149999999999999999999999999999
Q ss_pred ecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC
Q 005864 556 FLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635 (673)
Q Consensus 556 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
.+...........||+.|+|||++.+..++.++|||||||++|||+||+.||......+ ....+.....+..
T Consensus 163 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~--------~~~~i~~~~~~~~ 234 (269)
T d2java1 163 ILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE--------LAGKIREGKFRRI 234 (269)
T ss_dssp HC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH--------HHHHHHHTCCCCC
T ss_pred ecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHH--------HHHHHHcCCCCCC
Confidence 87655555566789999999999999999999999999999999999999997433211 1112222222211
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
+. ..+.++.+++.+||+.||++|||++|+++
T Consensus 235 ~~---~~s~~l~~li~~~L~~dp~~Rps~~ell~ 265 (269)
T d2java1 235 PY---RYSDELNEIITRMLNLKDYHRPSVEEILE 265 (269)
T ss_dssp CT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred Cc---ccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 11 23346889999999999999999999975
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-51 Score=405.26 Aligned_cols=252 Identities=21% Similarity=0.377 Sum_probs=204.8
Q ss_pred hcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
.++|++.+.||+|+||+||+|.+++++.||||+++.... ..+.|.+|++++++++|||||+++|++.+ +..++||
T Consensus 12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~----~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~ 86 (272)
T d1qpca_ 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86 (272)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCcC----CHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEE
Confidence 357888999999999999999998889999999875422 24679999999999999999999998855 5678999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++..... ..+++..+..|+.|||+||+|||++ +|+||||||+||++++++.+||+|||+|+.+...
T Consensus 87 Ey~~~g~L~~~~~~~~~-~~l~~~~~~~i~~qi~~gl~~lH~~---~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~ 162 (272)
T d1qpca_ 87 EYMENGSLVDFLKTPSG-IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (272)
T ss_dssp ECCTTCBHHHHTTSHHH-HTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred EeCCCCcHHHHHhhcCC-CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccchhheeeecccceeeccccceEEccCC
Confidence 99999999998865432 3589999999999999999999999 9999999999999999999999999999987543
Q ss_pred CC-CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC-CCCCCCcc
Q 005864 561 SS-NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPSRN 638 (673)
Q Consensus 561 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 638 (673)
.. ......||+.|+|||++.+..++.++|||||||++|||+||..|+...... ......+... +...+.
T Consensus 163 ~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~-------~~~~~~i~~~~~~~~p~-- 233 (272)
T d1qpca_ 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-------PEVIQNLERGYRMVRPD-- 233 (272)
T ss_dssp CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-------HHHHHHHHTTCCCCCCT--
T ss_pred ccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCH-------HHHHHHHHhcCCCCCcc--
Confidence 32 223456889999999999999999999999999999999966654321111 1111111111 122222
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+.++.+++.+||+.||++||||+||+++|+
T Consensus 234 --~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~ 265 (272)
T d1qpca_ 234 --NCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265 (272)
T ss_dssp --TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --cChHHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence 23345889999999999999999999999886
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.4e-51 Score=397.14 Aligned_cols=251 Identities=24% Similarity=0.424 Sum_probs=211.4
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
++|++.+.||+|+||+||+|++++++.||||+++..... .++|.+|+.++++++|||||+++|+|.+++..++|||
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~~~----~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~E 79 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS----EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 79 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSSSC----HHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEE
T ss_pred HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCcCC----HHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEE
Confidence 578999999999999999999988999999998764322 4679999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++.... ..+++..+.+++.|+|+||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 80 y~~~g~l~~~~~~~~--~~~~~~~~~~i~~qi~~gl~~LH~~---~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~ 154 (258)
T d1k2pa_ 80 YMANGCLLNYLREMR--HRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 154 (258)
T ss_dssp CCTTEEHHHHHHSGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSS
T ss_pred ccCCCcHHHhhhccc--cCCcHHHHHHHHHHHHHHHHHHhhc---CcccccccceeEEEcCCCcEEECcchhheeccCCC
Confidence 999999999987654 4588899999999999999999999 99999999999999999999999999998765433
Q ss_pred C-CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCCCCCcc
Q 005864 562 S-NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPSRN 638 (673)
Q Consensus 562 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 638 (673)
. ......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||+.....+. ...+... +...+.
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~--------~~~i~~~~~~~~p~-- 224 (258)
T d1k2pa_ 155 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSET--------AEHIAQGLRLYRPH-- 224 (258)
T ss_dssp CCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH--------HHHHHTTCCCCCCT--
T ss_pred ceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHH--------HHHHHhCCCCCCcc--
Confidence 3 2234668999999999999999999999999999999998 8999875432211 1111111 222222
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+.++.+++.+||+.||++|||++|+++.|.+
T Consensus 225 --~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d 257 (258)
T d1k2pa_ 225 --LASEKVYTIMYSCWHEKADERPTFKILLSNILD 257 (258)
T ss_dssp --TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred --cccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence 223468999999999999999999999998853
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-51 Score=406.73 Aligned_cols=249 Identities=20% Similarity=0.324 Sum_probs=208.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|+.. +|+.||||++......+....+.+.+|++++++++|||||++++++.+++..++||
T Consensus 8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm 87 (288)
T d1uu3a_ 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 87 (288)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence 46999999999999999999774 79999999997655444555678999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+|+.+...
T Consensus 88 Ey~~gg~L~~~~~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~ 161 (288)
T d1uu3a_ 88 SYAKNGELLKYIRKIG---SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 161 (288)
T ss_dssp CCCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EccCCCCHHHhhhccC---CCCHHHHHHHHHHHHHHHHhhccc---cEEcCcCCccccccCCCceEEecccccceecccC
Confidence 9999999999988753 588999999999999999999999 9999999999999999999999999999987543
Q ss_pred CC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 561 SS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 561 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+..
T Consensus 162 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~--------~~~~~i~~~~~~~p~~- 232 (288)
T d1uu3a_ 162 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEY--------LIFQKIIKLEYDFPEK- 232 (288)
T ss_dssp --------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHTTCCCCCTT-
T ss_pred CcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHH--------HHHHHHHcCCCCCCcc-
Confidence 22 234567999999999999999999999999999999999999999743221 1222233333333332
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVC 668 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~ 668 (673)
.+.++.+++.+||+.||++|||++|++
T Consensus 233 ---~s~~~~~li~~~L~~dP~~R~t~~e~~ 259 (288)
T d1uu3a_ 233 ---FFPKARDLVEKLLVLDATKRLGCEEME 259 (288)
T ss_dssp ---CCHHHHHHHHTTSCSSGGGSTTSGGGT
T ss_pred ---CCHHHHHHHHHHccCCHhHCcCHHHHc
Confidence 234588999999999999999999864
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.6e-52 Score=414.07 Aligned_cols=253 Identities=25% Similarity=0.401 Sum_probs=208.0
Q ss_pred HhcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeE
Q 005864 400 ATKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 400 ~~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 478 (673)
..++|++.+.||+|+||+||+|.+. +|+.||||+++.... ..++|.+|++++++++|||||+++|+|.+++..++
T Consensus 15 ~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~----~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~i 90 (287)
T d1opja_ 15 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90 (287)
T ss_dssp CGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCS----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred cHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccc----hHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEE
Confidence 3467888999999999999999875 588999999865422 35679999999999999999999999999999999
Q ss_pred EEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 479 VYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 479 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
||||+++|+|.+++..... ..+++..+..++.|||+||+|||++ +|+||||||+|||+++++.+||+|||+|+...
T Consensus 91 v~E~~~~g~l~~~l~~~~~-~~~~~~~~~~i~~qi~~gL~yLH~~---~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~ 166 (287)
T d1opja_ 91 ITEFMTYGNLLDYLRECNR-QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 166 (287)
T ss_dssp EEECCTTCBHHHHHHHSCT-TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCCTTTCC
T ss_pred EeecccCcchHHHhhhccc-cchHHHHHHHHHHHHHHHHHHHHHC---CcccCccccCeEEECCCCcEEEccccceeecC
Confidence 9999999999999976533 5689999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCC-ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC--CCCCC
Q 005864 559 PGSSN-WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP--RLPLP 635 (673)
Q Consensus 559 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 635 (673)
..... .....|++.|+|||++.+..++.++|||||||++|||++|..||....... ...+.+.. +.+.+
T Consensus 167 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~--------~~~~~i~~~~~~~~~ 238 (287)
T d1opja_ 167 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------QVYELLEKDYRMERP 238 (287)
T ss_dssp SSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--------HHHHHHHTTCCCCCC
T ss_pred CCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHH--------HHHHHHhcCCCCCCC
Confidence 43322 233457889999999999999999999999999999999777754211111 11111111 12222
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
. ..+.++.+++.+||+.||++|||++||++.|+
T Consensus 239 ~----~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~ 271 (287)
T d1opja_ 239 E----GCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 271 (287)
T ss_dssp T----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred c----cchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 2 23446899999999999999999999999875
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-51 Score=408.89 Aligned_cols=251 Identities=21% Similarity=0.312 Sum_probs=205.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+.|++.+.||+|+||+||+|++. +|+.||||++..... ...+.+.+|++++++++|||||++++++.+++..++||
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~---~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvm 88 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE---EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI 88 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSS---GGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCH---HHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEE
Confidence 46888999999999999999774 699999999875422 23567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++.... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 89 Ey~~~g~L~~~~~~~~--~~l~e~~~~~i~~qi~~gL~ylH~~---~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~ 163 (288)
T d2jfla1 89 EFCAGGAVDAVMLELE--RPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT 163 (288)
T ss_dssp ECCTTEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECHHH
T ss_pred ecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEEEeecChhheeECCCCCEEEEechhhhccCCC
Confidence 9999999999986543 4589999999999999999999999 9999999999999999999999999999865433
Q ss_pred CCCceecccccccccccccc-----cCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCC
Q 005864 561 SSNWTEFAGTFGYVAPELAY-----TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLP 635 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (673)
........||+.|+|||++. +..++.++||||+||++|||++|+.||......+. ...+.....+.
T Consensus 164 ~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~--------~~~i~~~~~~~- 234 (288)
T d2jfla1 164 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRV--------LLKIAKSEPPT- 234 (288)
T ss_dssp HHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH--------HHHHHHSCCCC-
T ss_pred cccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHH--------HHHHHcCCCCC-
Confidence 22334567999999999984 45689999999999999999999999974432211 11111111111
Q ss_pred CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 636 SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 636 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.......+.++.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~ 268 (288)
T d2jfla1 235 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ 268 (288)
T ss_dssp CSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1112234456899999999999999999999975
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-50 Score=400.99 Aligned_cols=251 Identities=25% Similarity=0.353 Sum_probs=204.6
Q ss_pred cCCCccce-eccCCcEEEEEEEeC---CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQC-IGIGGQASVYRGELP---SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~-ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
++|.+.+. ||+|+||+||+|.++ ++..||||+++... .....++|.+|++++++++|||||+++|++.. +..+
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~ 84 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALM 84 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC--CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEE
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhc--CHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEE
Confidence 34556664 999999999999764 35579999987542 33456789999999999999999999999865 4678
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++|+|.+++...+ ..+++..+..++.|||+||+|||++ +|+||||||+||+++.++.+||+|||+++.+
T Consensus 85 lvmE~~~~g~L~~~l~~~~--~~l~~~~~~~i~~qi~~gL~ylH~~---~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~ 159 (285)
T d1u59a_ 85 LVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKAL 159 (285)
T ss_dssp EEEECCTTEEHHHHHTTCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEeCCCCcHHHHhhccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCcCchhheeeccCCceeeccchhhhcc
Confidence 9999999999999986543 4689999999999999999999999 9999999999999999999999999999987
Q ss_pred CCCCCC---ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CC
Q 005864 558 KPGSSN---WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RL 632 (673)
Q Consensus 558 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 632 (673)
...... .....||+.|+|||++.+..++.++|||||||++|||+| |+.||......+. ...+... ++
T Consensus 160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~--------~~~i~~~~~~ 231 (285)
T d1u59a_ 160 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV--------MAFIEQGKRM 231 (285)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH--------HHHHHTTCCC
T ss_pred cccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHH--------HHHHHcCCCC
Confidence 554322 234568899999999999999999999999999999998 9999974432111 1111111 22
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+.+. ..+.++.+++.+||+.||++||||.+|++.|+
T Consensus 232 ~~p~----~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~ 267 (285)
T d1u59a_ 232 ECPP----ECPPELYALMSDCWIYKWEDRPDFLTVEQRMR 267 (285)
T ss_dssp CCCT----TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred CCCC----cCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 2222 23456889999999999999999999999885
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=9.3e-51 Score=407.15 Aligned_cols=251 Identities=27% Similarity=0.362 Sum_probs=193.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+.|++.+.||+|+||+||+|+.. +|+.||||++....... ..+.+.+|+.++++++|||||++++++.+++..++||
T Consensus 9 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvm 86 (307)
T d1a06a_ 9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG--KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIM 86 (307)
T ss_dssp GTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC------------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhh--HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56899999999999999999775 69999999987653322 3466889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeC---CCCceEEecccceeec
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS---SEYEARVSDFGIAKFL 557 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~~~~~ 557 (673)
||++||+|.+++... ..+++..+..++.||+.||+|||++ +|+||||||+||++. +++.+||+|||+++..
T Consensus 87 E~~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~~---~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~ 160 (307)
T d1a06a_ 87 QLVSGGELFDRIVEK---GFYTERDASRLIFQVLDAVKYLHDL---GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKME 160 (307)
T ss_dssp CCCCSCBHHHHHHTC---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCC------
T ss_pred eccCCCcHHHhhhcc---cCCCHHHHHHHHHHHHHHHHhhhhc---eeeeEEecccceeecccCCCceEEEeccceeEEc
Confidence 999999999999865 3589999999999999999999999 999999999999995 5789999999999876
Q ss_pred CCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 558 KPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
.... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+..
T Consensus 161 ~~~~-~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~--------~~~~~i~~~~~~~~~~ 231 (307)
T d1a06a_ 161 DPGS-VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA--------KLFEQILKAEYEFDSP 231 (307)
T ss_dssp -------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--------HHHHHHHTTCCCCCTT
T ss_pred cCCC-eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHH--------HHHHHHhccCCCCCCc
Confidence 5432 234567999999999999999999999999999999999999999743221 1122233333333322
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+.++.+++.+||+.||++|||++|+++
T Consensus 232 ~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 263 (307)
T d1a06a_ 232 YWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 263 (307)
T ss_dssp TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred cccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence 33344567899999999999999999999987
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.1e-50 Score=394.48 Aligned_cols=245 Identities=26% Similarity=0.400 Sum_probs=198.3
Q ss_pred ceeccCCcEEEEEEEeC---CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEeccc
Q 005864 408 QCIGIGGQASVYRGELP---SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYECLE 484 (673)
Q Consensus 408 ~~ig~G~~g~vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 484 (673)
+.||+|+||+||+|.+. .++.||||+++... .+....++|.+|++++++++|||||+++|+|.. +..++||||++
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~ 90 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE 90 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhh-CCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCC
Confidence 46999999999999764 35689999987543 334456789999999999999999999999965 45789999999
Q ss_pred CCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCCCc
Q 005864 485 RGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSSNW 564 (673)
Q Consensus 485 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~~~ 564 (673)
+|+|.++++.. ..+++..+..++.|||+||+|||++ +|+||||||+||+++.++.+||+|||+++.+.......
T Consensus 91 ~g~L~~~l~~~---~~l~~~~~~~i~~qi~~gl~ylH~~---~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~ 164 (277)
T d1xbba_ 91 LGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 164 (277)
T ss_dssp TEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEE
T ss_pred CCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHhhHHhC---CcccCCCcchhhcccccCcccccchhhhhhcccccccc
Confidence 99999999875 3589999999999999999999999 99999999999999999999999999999875443322
Q ss_pred ---eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccC-CCCCCCCcch
Q 005864 565 ---TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILD-PRLPLPSRNI 639 (673)
Q Consensus 565 ---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 639 (673)
....||+.|+|||.+.+..++.++|||||||++|||+| |+.||......+. ...+.. .+++.+.
T Consensus 165 ~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~--------~~~i~~~~~~~~p~--- 233 (277)
T d1xbba_ 165 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV--------TAMLEKGERMGCPA--- 233 (277)
T ss_dssp EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH--------HHHHHTTCCCCCCT---
T ss_pred ccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHH--------HHHHHcCCCCCCCc---
Confidence 23568999999999999999999999999999999998 8999974332111 111111 1222222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+.++.+++.+||+.||++|||++||+++|+
T Consensus 234 -~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~ 265 (277)
T d1xbba_ 234 -GCPREMYDLMNLCWTYDVENRPGFAAVELRLR 265 (277)
T ss_dssp -TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred -ccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhh
Confidence 23446889999999999999999999998875
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=6e-50 Score=408.18 Aligned_cols=251 Identities=21% Similarity=0.301 Sum_probs=211.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|+.++++++|||||++++++.+++..++||
T Consensus 26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~---~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 102 (350)
T d1koaa2 26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE---SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 102 (350)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSH---HHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccch---hhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57999999999999999999764 799999999876432 24577899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC--CCceEEecccceeecC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS--EYEARVSDFGIAKFLK 558 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~~~~~~ 558 (673)
|||++|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||+++. ++.+||+|||+++.+.
T Consensus 103 E~~~gg~L~~~l~~~~--~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~ 177 (350)
T d1koaa2 103 EFMSGGELFEKVADEH--NKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 177 (350)
T ss_dssp CCCCSCBHHHHHTCTT--SCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTSCCEEECCCTTCEECC
T ss_pred EcCCCCCHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhc---CCeeeeechhHeeeccCCCCeEEEeecchheecc
Confidence 9999999999996543 4589999999999999999999999 9999999999999964 5789999999999875
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
.. .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+.......+...
T Consensus 178 ~~-~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~--------~~~~~~i~~~~~~~~~~~ 248 (350)
T d1koaa2 178 PK-QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--------DETLRNVKSCDWNMDDSA 248 (350)
T ss_dssp TT-SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHHTCCCSCCGG
T ss_pred cc-cccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCCccc
Confidence 43 334567899999999999999999999999999999999999999974322 122223333333333333
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.++.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 279 (350)
T d1koaa2 249 FSGISEDGKDFIRKLLLADPNTRMTIHQALE 279 (350)
T ss_dssp GGGCCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred ccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 3444567899999999999999999999986
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-50 Score=398.45 Aligned_cols=253 Identities=26% Similarity=0.430 Sum_probs=198.5
Q ss_pred cCCCccceeccCCcEEEEEEEeCCC-----CEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSG-----EVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
..|+..+.||+|+||+||+|.++.. ..||||++..... .....+|.+|+.++++++|||||+++|++.+.+..
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~ 84 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYT--EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM 84 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccC--hHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCce
Confidence 4678889999999999999976532 3699999865432 23456799999999999999999999999999999
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||+.+|++.+++.... ..++|.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 85 ~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~~i~~gl~~lH~~---~iiHrDlKp~NILl~~~~~~Kl~DFGla~~ 159 (283)
T d1mqba_ 85 MIITEYMENGALDKFLREKD--GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRV 159 (283)
T ss_dssp EEEEECCTTEEHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEEEecccCcchhhhhccc--ccccHHHHHHHHHHHHHhhhhcccc---ccccCccccceEEECCCCeEEEcccchhhc
Confidence 99999999999999887654 4689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC---ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC-CC
Q 005864 557 LKPGSSN---WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP-RL 632 (673)
Q Consensus 557 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 632 (673)
+...... .....||+.|+|||++.+..++.++|||||||++|||++|..|+...... ......+.++ +.
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~-------~~~~~~i~~~~~~ 232 (283)
T d1mqba_ 160 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-------HEVMKAINDGFRL 232 (283)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-------HHHHHHHHTTCCC
T ss_pred ccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCH-------HHHHHHHhccCCC
Confidence 6543221 23356889999999999999999999999999999999976665421110 1111112221 12
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+.+. ..+.++.+++.+||+.||++||||+||++.|+
T Consensus 233 ~~~~----~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~ 268 (283)
T d1mqba_ 233 PTPM----DCPSAIYQLMMQCWQQERARRPKFADIVSILD 268 (283)
T ss_dssp CCCT----TCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred CCch----hhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHH
Confidence 2222 23456899999999999999999999999886
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-50 Score=409.59 Aligned_cols=254 Identities=22% Similarity=0.383 Sum_probs=205.2
Q ss_pred cCCCccceeccCCcEEEEEEEeCC------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCC
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPR 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 474 (673)
++|++.+.||+|+||+||+|++.. +..||||.+.... .......+.+|+.++.++ +|||||++++++.+++
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~ 114 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 114 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc--CHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC
Confidence 578899999999999999997642 2369999886542 233456789999999998 8999999999999999
Q ss_pred eeeEEEecccCCChHHHHhcCCC--------------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCC
Q 005864 475 HSFLVYECLERGSLAEILSNDGS--------------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDIS 534 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~--------------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk 534 (673)
..++||||+++|+|.++++.... ...+++..++.++.||++||+|||++ +|+|||||
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~---~IiHRDlK 191 (325)
T d1rjba_ 115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLA 191 (325)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCS
T ss_pred eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCc
Confidence 99999999999999999976532 23589999999999999999999999 99999999
Q ss_pred CCCeEeCCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccc
Q 005864 535 SKNVLLSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFIS 611 (673)
Q Consensus 535 ~~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~ 611 (673)
|+||+++.++.+||+|||+|+........ .....||+.|+|||++.+..++.++|||||||++|||+| |+.||....
T Consensus 192 p~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~ 271 (325)
T d1rjba_ 192 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 271 (325)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCC
Confidence 99999999999999999999876544332 234567999999999999999999999999999999998 899997433
Q ss_pred cccccccccccccccccCC--CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 612 LLSSSSSNMNLSLNEILDP--RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+ ...+++.. +++.+. ..+.++.+++.+||+.||++|||++||++.|.
T Consensus 272 ~~~--------~~~~~~~~~~~~~~p~----~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~ 322 (325)
T d1rjba_ 272 VDA--------NFYKLIQNGFKMDQPF----YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG 322 (325)
T ss_dssp CSH--------HHHHHHHTTCCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHH--------HHHHHHhcCCCCCCCC----cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence 211 11122222 222222 23346899999999999999999999999984
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-50 Score=399.62 Aligned_cols=253 Identities=21% Similarity=0.304 Sum_probs=210.8
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhh---hHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSE---ISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
+.|++.+.||+|+||+||+|+. .+|+.||||++....... ....+.+.+|++++++++|||||++++++.+++..+
T Consensus 10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ 89 (293)
T d1jksa_ 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 89 (293)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 5799999999999999999987 479999999987543322 223678999999999999999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC----ceEEecccc
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY----EARVSDFGI 553 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg~ 553 (673)
+|||||++|+|.+++...+ .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+|++|||+
T Consensus 90 iv~E~~~gg~L~~~i~~~~---~l~~~~~~~~~~qi~~al~yLH~~---~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~ 163 (293)
T d1jksa_ 90 LILELVAGGELFDFLAEKE---SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGL 163 (293)
T ss_dssp EEEECCCSCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEcCCCccccchhcccc---ccchhHHHHHHHHHHHHHHhhhhc---ceeecccccceEEEecCCCcccceEecchhh
Confidence 9999999999999998753 589999999999999999999999 999999999999998776 499999999
Q ss_pred eeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
+....... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+......
T Consensus 164 a~~~~~~~-~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~--------~~~~~i~~~~~~ 234 (293)
T d1jksa_ 164 AHKIDFGN-EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--------ETLANVSAVNYE 234 (293)
T ss_dssp CEECTTSC-BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHTTCCC
T ss_pred hhhcCCCc-cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHH--------HHHHHHHhcCCC
Confidence 98875443 334567899999999999999999999999999999999999999743221 112222233333
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+.......+.++.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 270 (293)
T d1jksa_ 235 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270 (293)
T ss_dssp CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 332222334556889999999999999999999986
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.5e-50 Score=404.07 Aligned_cols=248 Identities=25% Similarity=0.375 Sum_probs=204.8
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
..|+..+.||+|+||+||+|+. .+|+.||||++...........+.+.+|++++++++|||||++++++.+++..++||
T Consensus 15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~ 94 (309)
T d1u5ra_ 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (309)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEE
Confidence 3588899999999999999976 478999999997665555556778999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|||++|++..++... ..+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|.....
T Consensus 95 E~~~~g~l~~~~~~~---~~l~e~~~~~i~~qi~~aL~yLH~~---~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~- 167 (309)
T d1u5ra_ 95 EYCLGSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP- 167 (309)
T ss_dssp ECCSEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-
T ss_pred EecCCCchHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEECCCCCEEEeecccccccCC-
Confidence 999999998777654 3589999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCceeccccccccccccccc---CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 561 SSNWTEFAGTFGYVAPELAYT---MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
.....||+.|+|||++.+ +.|+.++|||||||++|||++|+.||......+. ...+.....+...
T Consensus 168 ---~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~--------~~~i~~~~~~~~~- 235 (309)
T d1u5ra_ 168 ---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--------LYHIAQNESPALQ- 235 (309)
T ss_dssp ---BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH--------HHHHHHSCCCCCS-
T ss_pred ---CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHH--------HHHHHhCCCCCCC-
Confidence 234679999999999864 4589999999999999999999999874322211 1111111111110
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.++.+++.+||+.||++|||++|+++
T Consensus 236 -~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 266 (309)
T d1u5ra_ 236 -SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 266 (309)
T ss_dssp -CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -CCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence 1122346889999999999999999999875
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.9e-50 Score=392.27 Aligned_cols=248 Identities=23% Similarity=0.357 Sum_probs=197.7
Q ss_pred CccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec----CCeeeEE
Q 005864 405 DAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH----PRHSFLV 479 (673)
Q Consensus 405 ~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv 479 (673)
+..+.||+|+||+||+|.+. +++.||+|++...... ....+.+.+|++++++++|||||++++++.+ +...++|
T Consensus 12 ~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv 90 (270)
T d1t4ha_ 12 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 90 (270)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence 55678999999999999765 6889999998765332 3346789999999999999999999999864 3457899
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeC-CCCceEEecccceeecC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS-SEYEARVSDFGIAKFLK 558 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~~~~~~ 558 (673)
|||+++|+|.+++.+. ..+++..+..++.||++||+|||++.. +|+||||||+|||++ +++.+||+|||+|+...
T Consensus 91 mE~~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~gl~yLH~~~~-~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~ 166 (270)
T d1t4ha_ 91 TELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 166 (270)
T ss_dssp EECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTSSS-CCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EeCCCCCcHHHHHhcc---ccccHHHHHHHHHHHHHHHHHHHHCCC-CEEeCCcChhhceeeCCCCCEEEeecCcceecc
Confidence 9999999999999865 358899999999999999999999811 299999999999996 57899999999997543
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
........||+.|+|||++.+ .++.++||||+||++|||++|+.||....... .....+.....+ ...
T Consensus 167 --~~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~-------~~~~~i~~~~~~--~~~ 234 (270)
T d1t4ha_ 167 --ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAA-------QIYRRVTSGVKP--ASF 234 (270)
T ss_dssp --TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-------HHHHHHTTTCCC--GGG
T ss_pred --CCccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHH-------HHHHHHHcCCCC--ccc
Confidence 233456789999999998865 69999999999999999999999996332111 111111111111 111
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.++.+++.+||++||++|||++|+++
T Consensus 235 ~~~~~~~~~~li~~~l~~dp~~R~s~~ell~ 265 (270)
T d1t4ha_ 235 DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 265 (270)
T ss_dssp GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence 1223346889999999999999999999986
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-49 Score=401.09 Aligned_cols=250 Identities=21% Similarity=0.250 Sum_probs=213.8
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|+. .+|+.||||++++.........+.+.+|+.++++++|||||++++++.+++..++||
T Consensus 5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ 84 (337)
T d1o6la_ 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence 5689999999999999999976 479999999998765444555788999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|||++|+|.+++...+ .+++..++.++.||+.||+|||++ +|+||||||+||++++++.+||+|||+|+.....
T Consensus 85 ey~~gg~L~~~~~~~~---~~~e~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~ 158 (337)
T d1o6la_ 85 EYANGGELFFHLSRER---VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp ECCTTCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred eccCCCchhhhhhccc---CCcHHHHHHHHHHHhhhhhhhhhc---CccccccCHHHeEecCCCCEEEeecccccccccC
Confidence 9999999999998764 478899999999999999999999 9999999999999999999999999999876655
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
........||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+....+..+..
T Consensus 159 ~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~--------~~~~~i~~~~~~~p~~--- 227 (337)
T d1o6la_ 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--------RLFELILMEEIRFPRT--- 227 (337)
T ss_dssp TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCTT---
T ss_pred CcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHH--------HHHHHHhcCCCCCCcc---
Confidence 55556688999999999999999999999999999999999999999743321 1122233333333332
Q ss_pred HHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRPT-----MQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rps-----~~~v~~ 669 (673)
.+.++.+++.+||++||++||+ ++|+++
T Consensus 228 -~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~ 260 (337)
T d1o6la_ 228 -LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp -SCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -CCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence 3345889999999999999995 788764
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=1.3e-49 Score=406.08 Aligned_cols=251 Identities=20% Similarity=0.269 Sum_probs=211.0
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
+.|++.+.||+|+||+||+|+. .+|+.||||+++..... ..+.+.+|++++++++|||||++++++.+++..++||
T Consensus 29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 105 (352)
T d1koba_ 29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL---DKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLIL 105 (352)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHH---HHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchh---HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 4699999999999999999976 47999999998764322 3567889999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeC--CCCceEEecccceeecC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLS--SEYEARVSDFGIAKFLK 558 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~--~~~~~kl~Dfg~~~~~~ 558 (673)
|||++|+|.+++...+ ..+++.++..|+.||+.||+|||++ +|+||||||+|||++ .++.+||+|||+|..+.
T Consensus 106 E~~~gg~L~~~~~~~~--~~l~e~~~~~i~~qi~~aL~ylH~~---~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~ 180 (352)
T d1koba_ 106 EFLSGGELFDRIAAED--YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 180 (352)
T ss_dssp ECCCCCBHHHHTTCTT--CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred EcCCCChHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccccccccccccCCCeEEEeecccceecC
Confidence 9999999999887653 4589999999999999999999999 999999999999998 57899999999999876
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcc
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRN 638 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (673)
.. .......||+.|+|||++.+..++.++||||+||++|||+||+.||...... .....+.......+...
T Consensus 181 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--------~~~~~i~~~~~~~~~~~ 251 (352)
T d1koba_ 181 PD-EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL--------ETLQNVKRCDWEFDEDA 251 (352)
T ss_dssp TT-SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--------HHHHHHHHCCCCCCSST
T ss_pred CC-CceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--------HHHHHHHhCCCCCCccc
Confidence 53 3345578999999999999999999999999999999999999999743221 11222222233333333
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+.++.+++.+||+.||++|||++|+++
T Consensus 252 ~~~~s~~~~~li~~~L~~dp~~R~s~~eil~ 282 (352)
T d1koba_ 252 FSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 282 (352)
T ss_dssp TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 3344566899999999999999999999986
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-50 Score=408.02 Aligned_cols=257 Identities=23% Similarity=0.362 Sum_probs=203.9
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||+||+|++. +|+.||+|+++... .....+.+.+|+.++++++|||||+++++|.+++..++|
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iV 82 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 82 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC--CTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 467999999999999999999764 78999999987542 233457889999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEeCCCCceEEecccceeecC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH-DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLK 558 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~ 558 (673)
|||+++|+|.+++.+.+ .+++..+..++.|++.||+|||+ + +|+||||||+|||+++++.+||+|||+|+...
T Consensus 83 mEy~~gg~L~~~l~~~~---~l~~~~~~~~~~qil~aL~yLH~~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~ 156 (322)
T d1s9ja_ 83 MEHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLREKH---KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI 156 (322)
T ss_dssp EECCTTEEHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHHH---CCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred EEcCCCCcHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHhC---CEEccccCHHHeeECCCCCEEEeeCCCccccC
Confidence 99999999999998653 48999999999999999999997 5 89999999999999999999999999998664
Q ss_pred CCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccc--------ccccc--------
Q 005864 559 PGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS--------SNMNL-------- 622 (673)
Q Consensus 559 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~--------~~~~~-------- 622 (673)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||......+... .....
T Consensus 157 ~~--~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (322)
T d1s9ja_ 157 DS--MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 234 (322)
T ss_dssp HH--TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-------------------
T ss_pred CC--ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccc
Confidence 32 2245689999999999999999999999999999999999999996432110000 00000
Q ss_pred ------------------ccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 623 ------------------SLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 623 ------------------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..........+. ......+.++.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~ 297 (322)
T d1s9ja_ 235 RPLSSYGMDSRPPMAIFELLDYIVNEPPPK--LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297 (322)
T ss_dssp -----------CCCCHHHHHHHHHTSCCCC--CCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccccccchhHHHHHhhhhccCCcc--CccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 000000000000 000112346889999999999999999999975
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-49 Score=394.01 Aligned_cols=252 Identities=24% Similarity=0.404 Sum_probs=199.8
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
++|++.+.||+|+||+||+|++++++.||||+++.... ..+.|.+|+.++++++|||||+++|+|.+ +..++|||
T Consensus 17 ~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~~----~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~E 91 (285)
T d1fmka3 17 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 91 (285)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred HHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECcccC----CHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEE
Confidence 57899999999999999999998888999999875432 24679999999999999999999999854 56789999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+++|+|.+++..... ..++|.++..++.|||+||+|||+. +|+||||||+||++++++++||+|||+++......
T Consensus 92 y~~~g~l~~~~~~~~~-~~l~~~~~~~i~~~i~~gl~~LH~~---~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~ 167 (285)
T d1fmka3 92 YMSKGSLLDFLKGETG-KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 167 (285)
T ss_dssp CCTTCBHHHHHSHHHH-TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred ecCCCchhhhhhhccc-ccchHHHHHHHHHHHHHHHHHHhhh---heecccccceEEEECCCCcEEEcccchhhhccCCC
Confidence 9999999999875421 3589999999999999999999999 99999999999999999999999999998764433
Q ss_pred C-CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC-CCCCCCCcch
Q 005864 562 S-NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD-PRLPLPSRNI 639 (673)
Q Consensus 562 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 639 (673)
. ......||+.|+|||++.++.++.++|||||||++|||++|..|+...... .+....+.. .+.+.+.
T Consensus 168 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~-------~~~~~~i~~~~~~~~~~--- 237 (285)
T d1fmka3 168 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-------REVLDQVERGYRMPCPP--- 237 (285)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH-------HHHHHHHHTTCCCCCCT---
T ss_pred ceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCH-------HHHHHHHHhcCCCCCCc---
Confidence 2 234467899999999999999999999999999999999976665422111 111111111 1222222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+.++.+++.+||+.||++||||++|+++|++
T Consensus 238 -~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 270 (285)
T d1fmka3 238 -ECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 270 (285)
T ss_dssp -TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred -ccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhh
Confidence 234468999999999999999999999998863
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-50 Score=394.36 Aligned_cols=256 Identities=27% Similarity=0.424 Sum_probs=197.7
Q ss_pred cCCCccceeccCCcEEEEEEEeC--CC--CEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP--SG--EVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
++|++.+.||+|+||+||+|++. ++ ..||||+++.....+....++|.+|+.++++++|||||+++|++.++ ..+
T Consensus 8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~-~~~ 86 (273)
T d1u46a_ 8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMK 86 (273)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS-SCE
T ss_pred HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeec-chh
Confidence 56889999999999999999753 23 36899998776555556678899999999999999999999999764 678
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++|++.+++.... ..+++..+..++.|||+||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 87 lv~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDikp~NIll~~~~~vkl~DfGl~~~~ 161 (273)
T d1u46a_ 87 MVTELAPLGSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161 (273)
T ss_dssp EEEECCTTCBHHHHHHHHG--GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eeeeeecCcchhhhhhccc--CCCCHHHHHHHHHHHHHHHHHhhhC---CEeeeeecHHHhccccccceeeccchhhhhc
Confidence 9999999999999887653 4689999999999999999999999 9999999999999999999999999999987
Q ss_pred CCCCCC---ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCCCCC
Q 005864 558 KPGSSN---WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 558 ~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
...... .....++..|+|||.+.+..++.++|||||||++|||+| |+.||......+. ...+......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~--------~~~i~~~~~~ 233 (273)
T d1u46a_ 162 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI--------LHKIDKEGER 233 (273)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH--------HHHHHTSCCC
T ss_pred ccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHH--------HHHHHhCCCC
Confidence 554332 233457889999999999999999999999999999998 8999874432211 1112111111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.+ .....+.++.+++.+||+.||++||||+||.+.|++
T Consensus 234 ~~--~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~ 271 (273)
T d1u46a_ 234 LP--RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLE 271 (273)
T ss_dssp CC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CC--CcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 11 111233468899999999999999999999999864
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=7.5e-49 Score=394.94 Aligned_cols=247 Identities=23% Similarity=0.353 Sum_probs=209.8
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|+.+ +|+.||||+++..........+.+.+|+.++++++|||||++++++.+++..++||
T Consensus 4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm 83 (316)
T d1fota_ 4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 83 (316)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence 46889999999999999999874 69999999997665555555788999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||++||+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 84 E~~~gg~l~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~ 157 (316)
T d1fota_ 84 DYIEGGELFSLLRKSQ---RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 157 (316)
T ss_dssp CCCCSCBHHHHHHHTS---SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred eecCCccccccccccc---cccccHHHHHHHHHHHhhhhhccC---cEEccccCchheeEcCCCCEEEecCccceEeccc
Confidence 9999999999998764 467788899999999999999999 9999999999999999999999999999886432
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...... .....+.......+..
T Consensus 158 ---~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~--------~~~~~i~~~~~~~p~~--- 223 (316)
T d1fota_ 158 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--------KTYEKILNAELRFPPF--- 223 (316)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--------HHHHHHHHCCCCCCTT---
T ss_pred ---cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHH--------HHHHHHHcCCCCCCCC---
Confidence 34568999999999999999999999999999999999999999743221 1222233333333322
Q ss_pred HHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.+.++.+++.+||+.||.+|| |++|+++
T Consensus 224 -~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~ 256 (316)
T d1fota_ 224 -FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 256 (316)
T ss_dssp -SCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -CCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence 234588999999999999996 8998874
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.2e-49 Score=399.78 Aligned_cols=262 Identities=21% Similarity=0.379 Sum_probs=211.0
Q ss_pred HHHHHhcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeee
Q 005864 396 EIIRATKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGF 469 (673)
Q Consensus 396 ~~~~~~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 469 (673)
+++...++|++.+.||+|+||+||+|+++ +++.||||+++... .....++|.+|++++++++||||++++++
T Consensus 7 ~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~ 84 (301)
T d1lufa_ 7 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGV 84 (301)
T ss_dssp HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred hccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc--ChHHHHHHHHHHHHHHhcCCCCcccceee
Confidence 33334578999999999999999999763 46789999987542 33356789999999999999999999999
Q ss_pred eecCCeeeEEEecccCCChHHHHhcCC---------------------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 005864 470 CSHPRHSFLVYECLERGSLAEILSNDG---------------------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPI 528 (673)
Q Consensus 470 ~~~~~~~~lv~e~~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~i 528 (673)
|...+..++||||+++|+|.+++.... ....+++..+..++.|+|.||+|||++ ++
T Consensus 85 ~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~---~i 161 (301)
T d1lufa_ 85 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KF 161 (301)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred eccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccC---Ce
Confidence 999999999999999999999996532 123488999999999999999999999 99
Q ss_pred EEecCCCCCeEeCCCCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCC-C
Q 005864 529 VHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK-H 605 (673)
Q Consensus 529 vH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~-~ 605 (673)
+||||||+||+++.++.+||+|||+|+.+..... ..+...+++.|+|||.+.+..++.++|||||||++|||++|. .
T Consensus 162 vHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~ 241 (301)
T d1lufa_ 162 VHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 241 (301)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred EeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCC
Confidence 9999999999999999999999999986644322 223467889999999999999999999999999999999986 5
Q ss_pred CCcccccccccccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 606 PRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 606 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
||......+ ....+.+...+..+ ...+.++.+++.+||+.||++||||.||+++|++
T Consensus 242 p~~~~~~~e--------~~~~v~~~~~~~~p---~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~ 298 (301)
T d1lufa_ 242 PYYGMAHEE--------VIYYVRDGNILACP---ENCPLELYNLMRLCWSKLPADRPSFCSIHRILQR 298 (301)
T ss_dssp TTTTSCHHH--------HHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCCHHH--------HHHHHHcCCCCCCC---ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 666432221 12222233222111 1233468999999999999999999999999874
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=3e-49 Score=392.48 Aligned_cols=257 Identities=26% Similarity=0.360 Sum_probs=204.4
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC----ee
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR----HS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~ 476 (673)
++|++.+.||+|+||+||+|++ .+|+.||||+++.....+....+.+.+|+++++.++|||||++++++...+ ..
T Consensus 7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~ 86 (277)
T d1o6ya_ 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 86 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence 5799999999999999999976 579999999998766555666778999999999999999999999987643 37
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
|+||||++||+|.+++...+ .+++.++..++.||++||+|||++ +|+||||||+||+++.++.++++|||.+..
T Consensus 87 ~lvmE~~~g~~L~~~~~~~~---~l~~~~~~~i~~qi~~al~~lH~~---~iiHrDiKP~NIll~~~~~~~l~d~~~~~~ 160 (277)
T d1o6ya_ 87 YIVMEYVDGVTLRDIVHTEG---PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARA 160 (277)
T ss_dssp EEEEECCCEEEHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTSCEEECCCTTCEE
T ss_pred EEEEECCCCCEehhhhcccC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCccccCcccccCccccceeehhhhhhh
Confidence 89999999999999987753 588999999999999999999999 999999999999999999999999999876
Q ss_pred cCCCCC---CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCC
Q 005864 557 LKPGSS---NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLP 633 (673)
Q Consensus 557 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (673)
...... ......||+.|+|||++.+..++.++||||+||++|||+||+.||......+. ....+.....
T Consensus 161 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~--------~~~~~~~~~~ 232 (277)
T d1o6ya_ 161 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV--------AYQHVREDPI 232 (277)
T ss_dssp CC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--------HHHHHHCCCC
T ss_pred hccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHH--------HHHHHhcCCC
Confidence 543322 23456799999999999999999999999999999999999999974332211 1111111111
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCC-CHHHHHHHhh
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRP-TMQTVCQLLC 672 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-s~~~v~~~L~ 672 (673)
.+.......+.++.+++.+||++||++|| |++++.+.|.
T Consensus 233 ~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~ 272 (277)
T d1o6ya_ 233 PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 272 (277)
T ss_dssp CGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred CCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHH
Confidence 11111223345688999999999999999 8999988775
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1e-48 Score=386.17 Aligned_cols=253 Identities=23% Similarity=0.371 Sum_probs=210.2
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhh------hHHHHHHHHHHHHHhccC-CCcccceeeeeecC
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSE------ISVQREFLNEIKALTEIR-HRNIVKFYGFCSHP 473 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~------~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~ 473 (673)
++|++.+.||+|+||+||+|+. .+|+.||||+++...... ....+.+.+|+.++++++ |||||++++++.++
T Consensus 3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 82 (277)
T d1phka_ 3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 82 (277)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence 5789999999999999999976 479999999986543221 233456889999999997 99999999999999
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccc
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGI 553 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 553 (673)
+..++||||+++|+|.++++..+ .+++.++..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 83 ~~~~ivmE~~~~g~L~~~l~~~~---~l~e~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~ 156 (277)
T d1phka_ 83 TFFFLVFDLMKKGELFDYLTEKV---TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGF 156 (277)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cceEEEEEcCCCchHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHc---CCcccccccceEEEcCCCCeEEccchh
Confidence 99999999999999999998653 589999999999999999999999 999999999999999999999999999
Q ss_pred eeecCCCCCCceeccccccccccccccc------CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccc
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAYT------MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEI 627 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 627 (673)
++...... ......||+.|+|||.+.+ ..++.++||||+||++|||++|+.||...... .....+
T Consensus 157 a~~~~~~~-~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~--------~~~~~i 227 (277)
T d1phka_ 157 SCQLDPGE-KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--------LMLRMI 227 (277)
T ss_dssp CEECCTTC-CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHH
T ss_pred eeEccCCC-ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHH--------HHHHHH
Confidence 99876543 3355779999999998863 34688999999999999999999999743321 112222
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 628 LDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.......+.......+.++.+++.+||++||++|||++|+++
T Consensus 228 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~ 269 (277)
T d1phka_ 228 MSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 269 (277)
T ss_dssp HHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 333333233333445567999999999999999999999976
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-49 Score=385.20 Aligned_cols=246 Identities=28% Similarity=0.410 Sum_probs=195.5
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec-CCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH-PRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ 480 (673)
++|++.+.||+|+||.||+|++ .|+.||||+++... ..+.|.+|++++++++|||||+++|+|.+ ++..++||
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~-~~~~vAvK~i~~~~-----~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ 80 (262)
T d1byga_ 7 KELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 80 (262)
T ss_dssp GGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred HHeEEeEEEecCCCeEEEEEEE-CCeEEEEEEECcHH-----HHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEE
Confidence 4678889999999999999998 58899999986532 35678999999999999999999999865 45689999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+++|+|.+++...+ ...++|..+.+|+.|||.||+|||+. +|+||||||+||+++.++.+|++|||+++.....
T Consensus 81 ey~~~g~L~~~l~~~~-~~~l~~~~~~~i~~~i~~al~ylH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~ 156 (262)
T d1byga_ 81 EYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 156 (262)
T ss_dssp CCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-------
T ss_pred eccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHhhccccccC---ceeccccchHhheecCCCCEeecccccceecCCC
Confidence 9999999999997643 24589999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccC-CCCCCCCcc
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILD-PRLPLPSRN 638 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 638 (673)
.....+++.|+|||++.+..++.++|||||||++|||+| |+.||......+ ....+.. .+.+.+.
T Consensus 157 ---~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~--------~~~~i~~~~~~~~~~-- 223 (262)
T d1byga_ 157 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--------VVPRVEKGYKMDAPD-- 223 (262)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG--------HHHHHTTTCCCCCCT--
T ss_pred ---CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHH--------HHHHHHcCCCCCCCc--
Confidence 234567899999999999999999999999999999998 688776432211 1111111 1222222
Q ss_pred hHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 639 IQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 639 ~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
..+.++.+++.+||+.||++||||.|++++|+
T Consensus 224 --~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~ 255 (262)
T d1byga_ 224 --GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLE 255 (262)
T ss_dssp --TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred --cCCHHHHHHHHHHcccCHhHCcCHHHHHHHHH
Confidence 22346889999999999999999999999986
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=3.7e-48 Score=395.27 Aligned_cols=247 Identities=21% Similarity=0.258 Sum_probs=210.3
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++++.||+|+||+||+|+++ +|+.||||++......+....+.+.+|+.+++.++|||||++++++.+.+..++|+
T Consensus 41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~ 120 (350)
T d1rdqe_ 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence 46899999999999999999774 79999999997655444455678999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+.+|+|.+++...+ .+++..+..++.||+.||.|||++ +|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 121 e~~~~g~l~~~l~~~~---~l~e~~~~~i~~qi~~aL~yLH~~---~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~ 194 (350)
T d1rdqe_ 121 EYVAGGEMFSHLRRIG---RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp ECCTTCBHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred ccccccchhhhHhhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCcCCHHHcccCCCCCEEeeeceeeeecccc
Confidence 9999999999998754 488999999999999999999999 9999999999999999999999999999987533
Q ss_pred CCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcchH
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNIQ 640 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (673)
.....||+.|+|||++.+..++.++||||+||++|||+||+.||...... .....+.......+..
T Consensus 195 ---~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~--------~~~~~i~~~~~~~p~~--- 260 (350)
T d1rdqe_ 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI--------QIYEKIVSGKVRFPSH--- 260 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--------HHHHHHHHCCCCCCTT---
T ss_pred ---cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHH--------HHHHHHhcCCCCCCcc---
Confidence 34467999999999999999999999999999999999999999743221 1222233333333322
Q ss_pred HHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 641 DKLISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 641 ~~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
.+.++.+++.+||+.||.+|+ |++|+++
T Consensus 261 -~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~ 293 (350)
T d1rdqe_ 261 -FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp -CCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred -CCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence 234588999999999999994 8999875
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-48 Score=385.90 Aligned_cols=252 Identities=25% Similarity=0.400 Sum_probs=195.9
Q ss_pred hcCCCccceeccCCcEEEEEEEeCC----CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELPS----GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
.++|++.+.||+|+||+||+|.+.. +..||||.++.. ......+.|.+|+.++++++|||||+++|++. ++..
T Consensus 6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~ 82 (273)
T d1mp8a_ 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 82 (273)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccc--cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeE
Confidence 3578899999999999999997642 456899988654 23345678999999999999999999999996 4678
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++||||+++|+|.+++.... ..+++..+..++.||++||+|||++ +|+||||||+||++++++.+||+|||+|+.
T Consensus 83 ~iv~E~~~~g~l~~~~~~~~--~~l~~~~~~~~~~qi~~gl~ylH~~---~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~ 157 (273)
T d1mp8a_ 83 WIIMELCTLGELRSFLQVRK--YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRY 157 (273)
T ss_dssp EEEEECCTTEEHHHHHHHTT--TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC------
T ss_pred EEEEEeccCCcHHhhhhccC--CCCCHHHHHHHHHHHHHHhhhhccc---CeeccccchhheeecCCCcEEEccchhhee
Confidence 99999999999999887653 4589999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC-CceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCcccccccccccccccccccccCC-CCC
Q 005864 557 LKPGSS-NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEILDP-RLP 633 (673)
Q Consensus 557 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 633 (673)
...... ......||+.|+|||.+.+..++.++|||||||++|||++ |..||......+. ...+... +.+
T Consensus 158 ~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~--------~~~i~~~~~~~ 229 (273)
T d1mp8a_ 158 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV--------IGRIENGERLP 229 (273)
T ss_dssp -------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH--------HHHHHTTCCCC
T ss_pred ccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHH--------HHHHHcCCCCC
Confidence 654332 2344568899999999999999999999999999999998 8999875433211 1111222 122
Q ss_pred CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 634 LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 634 ~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.+. ..+.++.+++.+||+.||++|||++||++.|+
T Consensus 230 ~~~----~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~ 264 (273)
T d1mp8a_ 230 MPP----NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 264 (273)
T ss_dssp CCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCC----CCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 222 23456899999999999999999999999885
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-48 Score=391.66 Aligned_cols=251 Identities=21% Similarity=0.263 Sum_probs=210.9
Q ss_pred hcCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEE
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 479 (673)
.++|++.+.||+|+||+||+|.+. +|+.||||.++.... ....+.+|+++|+.++|||||++++++.+++..|+|
T Consensus 4 ~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~----~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lv 79 (321)
T d1tkia_ 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT----DQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH----HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcc----cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 367999999999999999999775 688999999976432 245688999999999999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC--CceEEecccceeec
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE--YEARVSDFGIAKFL 557 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~--~~~kl~Dfg~~~~~ 557 (673)
||||+||+|.+++...+ ..+++.++..++.||+.||+|||++ +|+||||||+||+++.+ ..+||+|||+++..
T Consensus 80 mE~~~gg~L~~~i~~~~--~~l~e~~~~~i~~qi~~al~yLH~~---~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~ 154 (321)
T d1tkia_ 80 FEFISGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp ECCCCCCBHHHHHTSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHc---CCCcccccccceeecCCCceEEEEcccchhhcc
Confidence 99999999999997653 3589999999999999999999999 99999999999999854 47999999999876
Q ss_pred CCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCc
Q 005864 558 KPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSR 637 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (673)
... .......+++.|+|||...+..++.++||||+||++|||++|+.||..... ......+.......+..
T Consensus 155 ~~~-~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~--------~~~~~~i~~~~~~~~~~ 225 (321)
T d1tkia_ 155 KPG-DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN--------QQIIENIMNAEYTFDEE 225 (321)
T ss_dssp CTT-CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH--------HHHHHHHHHTCCCCCHH
T ss_pred ccC-CcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHhCCCCCChh
Confidence 543 334556789999999999999999999999999999999999999974322 12233344444444333
Q ss_pred chHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 638 NIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 638 ~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+...+.++.+++.+||..||++|||++|+++
T Consensus 226 ~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~ 257 (321)
T d1tkia_ 226 AFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 33344567899999999999999999999986
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-48 Score=393.44 Aligned_cols=249 Identities=22% Similarity=0.297 Sum_probs=207.9
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHh-ccCCCcccceeeeeecCCeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALT-EIRHRNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~-~l~h~niv~l~~~~~~~~~~~lv 479 (673)
++|++.+.||+|+||+||+|+.. +|+.||||++++.........+.+..|..++. .++|||||++++++.+++..|+|
T Consensus 2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv 81 (320)
T d1xjda_ 2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV 81 (320)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence 47899999999999999999775 69999999997654433444566777777765 68999999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCC
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKP 559 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~ 559 (673)
|||+++|+|.+++...+ .+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++....
T Consensus 82 mEy~~~g~L~~~i~~~~---~~~e~~~~~~~~qi~~al~ylH~~---~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~ 155 (320)
T d1xjda_ 82 MEYLNGGDLMYHIQSCH---KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENML 155 (320)
T ss_dssp EECCTTCBHHHHHHHHS---SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EeecCCCcHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCcccceeecCCCceeccccchhhhccc
Confidence 99999999999998753 478899999999999999999999 999999999999999999999999999987765
Q ss_pred CCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCCcch
Q 005864 560 GSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPSRNI 639 (673)
Q Consensus 560 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (673)
.........||+.|+|||++.+..++.++||||+||++|||++|+.||......+ ....+.......+.
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~--------~~~~i~~~~~~~p~--- 224 (320)
T d1xjda_ 156 GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE--------LFHSIRMDNPFYPR--- 224 (320)
T ss_dssp TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--------HHHHHHHCCCCCCT---
T ss_pred ccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHH--------HHHHHHcCCCCCCc---
Confidence 5555666789999999999999999999999999999999999999997433211 12222222233222
Q ss_pred HHHHHHHHHHHHHcccCCCCCCCCHH-HHH
Q 005864 640 QDKLISILEVALLCLEESPESRPTMQ-TVC 668 (673)
Q Consensus 640 ~~~~~~l~~li~~cl~~dp~~Rps~~-~v~ 668 (673)
..+.++.+++.+||+.||++|||+. |++
T Consensus 225 -~~s~~~~dli~~~L~~dP~~R~s~~~~l~ 253 (320)
T d1xjda_ 225 -WLEKEAKDLLVKLFVREPEKRLGVRGDIR 253 (320)
T ss_dssp -TSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred -cCCHHHHHHHHHhcccCCCCCcCHHHHHH
Confidence 2234588999999999999999985 564
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-47 Score=389.26 Aligned_cols=251 Identities=22% Similarity=0.309 Sum_probs=203.6
Q ss_pred cCCCccc-eeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeec----CC
Q 005864 402 KNFDAEQ-CIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSH----PR 474 (673)
Q Consensus 402 ~~~~~~~-~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~ 474 (673)
++|++.. .||+|+||+||+|++ .+|+.||||+++.. ..+.+|++++.++ +|||||++++++.+ ..
T Consensus 11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~--------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~ 82 (335)
T d2ozaa1 11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGRK 82 (335)
T ss_dssp GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc--------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCC
Confidence 5687764 699999999999976 57999999998642 3466799887655 89999999999865 46
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC---CCceEEecc
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS---EYEARVSDF 551 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Df 551 (673)
..|+|||||+||+|.+++...+. ..+++.++..++.||+.||+|||+. +|+||||||+||+++. ++.+||+||
T Consensus 83 ~~~ivmEy~~gg~L~~~i~~~~~-~~l~e~~~~~i~~qi~~al~ylH~~---~iiHRDiKp~NIll~~~~~~~~~Kl~DF 158 (335)
T d2ozaa1 83 CLLIVMECLDGGELFSRIQDRGD-QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDF 158 (335)
T ss_dssp EEEEEEECCCSEEHHHHHHSCSC-CCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCSSTTCCEEECCC
T ss_pred EEEEEEECCCCCcHHHHHHhcCC-CCcCHHHHHHHHHHHHHHHHHHHHc---CCcccccccccccccccccccccccccc
Confidence 68999999999999999986532 4699999999999999999999999 9999999999999985 457999999
Q ss_pred cceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCC
Q 005864 552 GIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPR 631 (673)
Q Consensus 552 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (673)
|+|+...... ......||+.|+|||++.+..++.++||||+||++|||+||+.||......+. .......+....
T Consensus 159 G~a~~~~~~~-~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~----~~~~~~~i~~~~ 233 (335)
T d2ozaa1 159 GFAKETTSHN-SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI----SPGMKTRIRMGQ 233 (335)
T ss_dssp TTCEECCCCC-CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC------------CCCSCS
T ss_pred ceeeeccCCC-ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHH----HHHHHHHHhcCC
Confidence 9998775433 33557899999999999999999999999999999999999999974332111 111122233334
Q ss_pred CCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 632 LPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 632 ~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
...+...+...+.++.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 271 (335)
T d2ozaa1 234 YEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 271 (335)
T ss_dssp SSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 44444445566778999999999999999999999986
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=5.2e-48 Score=396.43 Aligned_cols=251 Identities=21% Similarity=0.234 Sum_probs=201.5
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHH---HHHHHHHhccCCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREF---LNEIKALTEIRHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~---~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 477 (673)
++|++.+.||+|+||+||+|+.. +|+.||||++.............+ ..|+.+++.++|||||++++++.+++..+
T Consensus 4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ 83 (364)
T d1omwa3 4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 83 (364)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence 57899999999999999999775 699999999875443332223333 34577778889999999999999999999
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeec
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFL 557 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~ 557 (673)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+..
T Consensus 84 ivmE~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~ylH~~---~iiHrDlKP~NILl~~~g~iKl~DFGla~~~ 157 (364)
T d1omwa3 84 FILDLMNGGDLHYHLSQHG---VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDF 157 (364)
T ss_dssp EEECCCCSCBHHHHHHHHC---SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSSSCEEECCCTTCEEC
T ss_pred EEEEecCCCcHHHHHHhcc---cccHHHHHHHHHHHHHHHHHHHHC---CccceeeccceeEEcCCCcEEEeeeceeeec
Confidence 9999999999999998753 478899999999999999999999 9999999999999999999999999999977
Q ss_pred CCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCCCCCC
Q 005864 558 KPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRLPLPS 636 (673)
Q Consensus 558 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 636 (673)
... ......||+.|+|||++.. ..++.++||||+||++|||+||+.||......+ ...............+.
T Consensus 158 ~~~--~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~-----~~~~~~~~~~~~~~~~~ 230 (364)
T d1omwa3 158 SKK--KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-----KHEIDRMTLTMAVELPD 230 (364)
T ss_dssp SSS--CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSC-----HHHHHHHSSSCCCCCCS
T ss_pred CCC--cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHH-----HHHHHHhcccCCCCCCC
Confidence 543 2345679999999999864 568999999999999999999999997432111 01111122222222222
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCC-----HHHHHH
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPT-----MQTVCQ 669 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps-----~~~v~~ 669 (673)
..+.++.+++.+||+.||++||| ++|+++
T Consensus 231 ----~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~ 264 (364)
T d1omwa3 231 ----SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 264 (364)
T ss_dssp ----SSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred ----CCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence 23345889999999999999999 688764
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-48 Score=391.40 Aligned_cols=251 Identities=23% Similarity=0.395 Sum_probs=199.6
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCC----EEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGE----VVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 476 (673)
.+|++.+.||+|+||+||+|.+. +|+ +||+|+++... .....++|.+|++++++++|||||+++|+|.++ ..
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~ 85 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 85 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC------CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SE
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-Ce
Confidence 45899999999999999999764 454 68999886542 233467899999999999999999999999875 46
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
++++||+.+|+|.+++.... ..+++..+..++.|||+||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 86 ~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~gl~yLH~~---~iiHrDlKp~NIll~~~~~~kl~DFGla~~ 160 (317)
T d1xkka_ 86 QLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 160 (317)
T ss_dssp EEEEECCTTCBHHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCCSHHHH
T ss_pred eEEEEeccCCcccccccccc--cCCCHHHHHHHHHHHHHHHHHHHHc---CcccCcchhhcceeCCCCCeEeecccccee
Confidence 78889999999999988754 5689999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccccccccccccccc-CCCC
Q 005864 557 LKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSSSSNMNLSLNEIL-DPRL 632 (673)
Q Consensus 557 ~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~ 632 (673)
....... .....||+.|+|||++.++.++.++|||||||++|||+| |+.||+.....+. ...+. ..++
T Consensus 161 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~--------~~~i~~~~~~ 232 (317)
T d1xkka_ 161 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI--------SSILEKGERL 232 (317)
T ss_dssp TTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGH--------HHHHHHTCCC
T ss_pred cccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHH--------HHHHHcCCCC
Confidence 7544332 233568999999999999999999999999999999998 8888874322111 11111 1122
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
+.+.. .+.++.+++.+||+.||++|||++|+++.|+
T Consensus 233 ~~p~~----~~~~~~~li~~cl~~dP~~RPs~~eil~~l~ 268 (317)
T d1xkka_ 233 PQPPI----CTIDVYMIMVKCWMIDADSRPKFRELIIEFS 268 (317)
T ss_dssp CCCTT----BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCcc----cCHHHHHHHHHhCCCChhhCcCHHHHHHHHH
Confidence 33222 3345889999999999999999999998875
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-47 Score=384.04 Aligned_cols=248 Identities=25% Similarity=0.369 Sum_probs=199.8
Q ss_pred cceeccCCcEEEEEEEeCCC----CEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec-CCeeeEEEe
Q 005864 407 EQCIGIGGQASVYRGELPSG----EVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH-PRHSFLVYE 481 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e 481 (673)
.++||+|+||+||+|++.++ ..||||+++.. ......++|.+|++++++++|||||+++|++.+ ++..++|||
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E 109 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP 109 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECCC--CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEE
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcc--cCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEE
Confidence 46899999999999987532 25899998653 334457889999999999999999999999875 568899999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
||++|+|.+++.... ...++..+.+++.|+|+||.|||+. +|+||||||+|||+++++.+||+|||+++......
T Consensus 110 ~~~~g~l~~~~~~~~--~~~~~~~~~~i~~qia~gL~~lH~~---~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~ 184 (311)
T d1r0pa_ 110 YMKHGDLRNFIRNET--HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 184 (311)
T ss_dssp CCTTCBHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTT
T ss_pred EeecCchhhhhcccc--ccchHHHHHHHHHHHHHhhhhhccc---CcccCCccHHhEeECCCCCEEEecccchhhccccc
Confidence 999999999998654 4577888999999999999999999 99999999999999999999999999998765432
Q ss_pred C----CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCC-CCCCCC
Q 005864 562 S----NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDP-RLPLPS 636 (673)
Q Consensus 562 ~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 636 (673)
. ......||+.|+|||.+.+..++.++||||||+++|||+||+.||...... ......+... +...+.
T Consensus 185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~-------~~~~~~i~~g~~~~~p~ 257 (311)
T d1r0pa_ 185 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-------FDITVYLLQGRRLLQPE 257 (311)
T ss_dssp CCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------------CHHHHHTTCCCCCCT
T ss_pred cccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH-------HHHHHHHHcCCCCCCcc
Confidence 2 123356899999999999999999999999999999999988887532111 1111111111 222222
Q ss_pred cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 637 RNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 637 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
. .+.++.+++.+||+.||++||||.||++.|+
T Consensus 258 ~----~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~ 289 (311)
T d1r0pa_ 258 Y----CPDPLYEVMLKCWHPKAEMRPSFSELVSRIS 289 (311)
T ss_dssp T----CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred c----CcHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 2 2345889999999999999999999999986
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-47 Score=382.66 Aligned_cols=263 Identities=24% Similarity=0.297 Sum_probs=198.6
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC----eee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR----HSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~ 477 (673)
++|.+.+.||+|+||+||+|++ +|+.||||+++.... ....+..|+..+..++|||||+++|+|.+++ ..+
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~~----~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~ 77 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE----RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch----hHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEE
Confidence 4577788999999999999987 689999999864321 1222334566667789999999999997643 578
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcC-----CCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDC-----FPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
+|||||++|+|.+++++. .++|..+.+++.|+|.||+|+|+.. .++|+||||||+||++++++.+||+|||
T Consensus 78 lv~Ey~~~g~L~~~l~~~----~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFG 153 (303)
T d1vjya_ 78 LVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EEEecccCCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecC
Confidence 999999999999999864 4899999999999999999999731 1399999999999999999999999999
Q ss_pred ceeecCCCCC----CceecccccccccccccccC------CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc---
Q 005864 553 IAKFLKPGSS----NWTEFAGTFGYVAPELAYTM------KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN--- 619 (673)
Q Consensus 553 ~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~------~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~--- 619 (673)
+++....... ......||+.|+|||++.+. .++.++|||||||++|||+||..||......+.....
T Consensus 154 l~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~ 233 (303)
T d1vjya_ 154 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 233 (303)
T ss_dssp TCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSC
T ss_pred ccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhccc
Confidence 9998754432 22346799999999998754 3678999999999999999999887543322111110
Q ss_pred ----cccccccccCCCCCC--CCc-chHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 620 ----MNLSLNEILDPRLPL--PSR-NIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 620 ----~~~~~~~~~~~~~~~--~~~-~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
.........+..+.. +.. ...+....+.+++.+||+.||++||||.||++.|++
T Consensus 234 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~ 294 (303)
T d1vjya_ 234 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred ccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence 011111122222211 111 123455679999999999999999999999999863
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.6e-48 Score=388.33 Aligned_cols=257 Identities=21% Similarity=0.369 Sum_probs=207.8
Q ss_pred cCCCccceeccCCcEEEEEEEe------CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCC
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL------PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPR 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 474 (673)
++|++.+.||+|+||.||+|++ .+++.||||+++... ......+|.+|+.++.++ +|||||+++|+|.+++
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~ 100 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc--CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCC
Confidence 5788899999999999999975 356789999997643 233567899999999999 6999999999999999
Q ss_pred eeeEEEecccCCChHHHHhcCC---------------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeE
Q 005864 475 HSFLVYECLERGSLAEILSNDG---------------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVL 539 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~---------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil 539 (673)
..++||||+++|+|.++++... ....+++..+..++.||++||+|||++ +++||||||+||+
T Consensus 101 ~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~---~ivHrDLKp~NIl 177 (311)
T d1t46a_ 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNIL 177 (311)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred EEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---Ceeeccccccccc
Confidence 9999999999999999997643 123588999999999999999999999 9999999999999
Q ss_pred eCCCCceEEecccceeecCCCCCCc--eecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccc
Q 005864 540 LSSEYEARVSDFGIAKFLKPGSSNW--TEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSS 616 (673)
Q Consensus 540 l~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~ 616 (673)
++.++.+|++|||.++......... ....||+.|+|||++.+..++.++|||||||++|||+| |.+||......
T Consensus 178 ~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~--- 254 (311)
T d1t46a_ 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD--- 254 (311)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS---
T ss_pred ccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHH---
Confidence 9999999999999998775443322 34678999999999999999999999999999999999 55555432211
Q ss_pred ccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 617 SSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....+++........ ....+.++.+++.+||+.||++||||+|++++|++
T Consensus 255 -----~~~~~~i~~~~~~~~--~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~ 304 (311)
T d1t46a_ 255 -----SKFYKMIKEGFRMLS--PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304 (311)
T ss_dssp -----HHHHHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -----HHHHHHHhcCCCCCC--cccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 111122222221111 11233468999999999999999999999999963
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.8e-48 Score=386.26 Aligned_cols=257 Identities=23% Similarity=0.354 Sum_probs=195.8
Q ss_pred hcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHP 473 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 473 (673)
.++|++.+.||+|+||+||+|.+. +++.||||+++... .....+.+.+|...+.++ +|+|||.+++++.++
T Consensus 12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~ 89 (299)
T d1ywna1 12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 89 (299)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--CcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccC
Confidence 467999999999999999999753 35689999987543 223456788888888887 689999999998764
Q ss_pred -CeeeEEEecccCCChHHHHhcCCC-------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeE
Q 005864 474 -RHSFLVYECLERGSLAEILSNDGS-------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVL 539 (673)
Q Consensus 474 -~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil 539 (673)
...++|||||++|+|.++++..+. ...+++.++..++.||++||+|||++ +|+||||||+||+
T Consensus 90 ~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~---~ivHrDlKp~NIL 166 (299)
T d1ywna1 90 GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNIL 166 (299)
T ss_dssp TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhC---CCcCCcCCcccee
Confidence 468999999999999999975431 23488999999999999999999999 9999999999999
Q ss_pred eCCCCceEEecccceeecCCCCC--CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCC-CCCccccccccc
Q 005864 540 LSSEYEARVSDFGIAKFLKPGSS--NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK-HPRDFISLLSSS 616 (673)
Q Consensus 540 l~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~-~p~~~~~~~~~~ 616 (673)
+++++.+||+|||+|+....... ......||+.|+|||.+.+..++.++|||||||++|||+||. .||......+..
T Consensus 167 l~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~ 246 (299)
T d1ywna1 167 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 246 (299)
T ss_dssp ECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHH
T ss_pred ECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHH
Confidence 99999999999999987654332 234567999999999999999999999999999999999964 567633221110
Q ss_pred ccccccccccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 617 SSNMNLSLNEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
. ....+- .+++.+. ..+.++.+++.+||+.||++|||++|+++.|+
T Consensus 247 ~----~~~~~~--~~~~~~~----~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~ 292 (299)
T d1ywna1 247 C----RRLKEG--TRMRAPD----YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLG 292 (299)
T ss_dssp H----HHHHHT--CCCCCCT----TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred H----HHHhcC--CCCCCCc----cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 0 001111 1122222 22345889999999999999999999999986
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.3e-47 Score=382.49 Aligned_cols=255 Identities=23% Similarity=0.359 Sum_probs=203.6
Q ss_pred cCCCccceeccCCcEEEEEEEeCC--------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeec
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPS--------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSH 472 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 472 (673)
++|++.+.||+|+||.||+|+... +..||||+++... ......++.+|+..+.++ +|||||+++++|.+
T Consensus 13 ~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~ 90 (299)
T d1fgka_ 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA--TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 90 (299)
T ss_dssp GGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECccc--ChHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Confidence 578889999999999999997532 3479999997643 233467889999999988 89999999999999
Q ss_pred CCeeeEEEecccCCChHHHHhcCCC-------------CccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeE
Q 005864 473 PRHSFLVYECLERGSLAEILSNDGS-------------IKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVL 539 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nil 539 (673)
++..++||||+++|+|.+++..... ...+++.+++.++.|||.||+|||+. +|+||||||+|||
T Consensus 91 ~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~---~ivHrDiKp~NiL 167 (299)
T d1fgka_ 91 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 167 (299)
T ss_dssp SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhC---CEEeeeeccccee
Confidence 9999999999999999999976542 24589999999999999999999999 9999999999999
Q ss_pred eCCCCceEEecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHh-CCCCCccccccccc
Q 005864 540 LSSEYEARVSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIK-GKHPRDFISLLSSS 616 (673)
Q Consensus 540 l~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~ 616 (673)
++.++.+||+|||+++........ .....+++.|+|||.+.++.++.++|||||||++|||++ |+.||......+
T Consensus 168 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~-- 245 (299)
T d1fgka_ 168 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE-- 245 (299)
T ss_dssp ECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH--
T ss_pred ecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHH--
Confidence 999999999999999877543322 234568899999999999999999999999999999998 688876432211
Q ss_pred ccccccccccccCC-CCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 617 SSNMNLSLNEILDP-RLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 617 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
....+.+. ++..+. ..+.++.+++.+||+.||++|||++||++.|++
T Consensus 246 ------~~~~i~~~~~~~~p~----~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~ 293 (299)
T d1fgka_ 246 ------LFKLLKEGHRMDKPS----NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 293 (299)
T ss_dssp ------HHHHHHTTCCCCCCS----SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ------HHHHHHcCCCCCCCc----cchHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 11111111 222222 233468999999999999999999999999863
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-47 Score=383.35 Aligned_cols=253 Identities=23% Similarity=0.368 Sum_probs=200.9
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCC--EEEEEeeccchhhhhHHHHHHHHHHHHHhcc-CCCcccceeeeeecCCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGE--VVAVKKFHSLLLSEISVQREFLNEIKALTEI-RHRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 477 (673)
++|++.+.||+|+||+||+|.++ +|. .||||+++... .....+.|.+|++++.++ +|||||+++|+|.+++..+
T Consensus 10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~ 87 (309)
T d1fvra_ 10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA--SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 87 (309)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECccc--ChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence 57888999999999999999775 444 47788875432 223467799999999999 7999999999999999999
Q ss_pred EEEecccCCChHHHHhcCC-------------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC
Q 005864 478 LVYECLERGSLAEILSNDG-------------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY 544 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 544 (673)
+||||+++|+|.++++... ....+++..+.+++.|||+||.|||+. +|+||||||+|||++.++
T Consensus 88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~---~iiHrDlkp~NIL~~~~~ 164 (309)
T d1fvra_ 88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENY 164 (309)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGG
T ss_pred EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcC---CccccccccceEEEcCCC
Confidence 9999999999999997642 235689999999999999999999999 999999999999999999
Q ss_pred ceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCC-CCcccccccccccccccc
Q 005864 545 EARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKH-PRDFISLLSSSSSNMNLS 623 (673)
Q Consensus 545 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~-p~~~~~~~~~~~~~~~~~ 623 (673)
.+||+|||+++....... .....||..|+|||.+.+..++.++|||||||++|||++|.. ||......+ .
T Consensus 165 ~~kl~DfG~a~~~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~--------~ 235 (309)
T d1fvra_ 165 VAKIADFGLSRGQEVYVK-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE--------L 235 (309)
T ss_dssp CEEECCTTCEESSCEECC-C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--------H
T ss_pred ceEEcccccccccccccc-ccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHH--------H
Confidence 999999999986543222 234568999999999999999999999999999999999765 665332211 1
Q ss_pred cccccC-CCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 624 LNEILD-PRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 624 ~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+.. .+++.+. ..+.++.+++.+||+.||++||||+||++.|+
T Consensus 236 ~~~i~~~~~~~~~~----~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~ 281 (309)
T d1fvra_ 236 YEKLPQGYRLEKPL----NCDDEVYDLMRQCWREKPYERPSFAQILVSLN 281 (309)
T ss_dssp HHHGGGTCCCCCCT----TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHhcCCCCCCc----cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 111111 1222222 23346899999999999999999999999885
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-47 Score=384.33 Aligned_cols=257 Identities=20% Similarity=0.339 Sum_probs=209.6
Q ss_pred hcCCCccceeccCCcEEEEEEEeC------CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC
Q 005864 401 TKNFDAEQCIGIGGQASVYRGELP------SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 474 (673)
.++|++.+.||+|+||+||+|.+. +++.||||+++... .......|.+|++++++++|||||+++|+|..++
T Consensus 19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~ 96 (308)
T d1p4oa_ 19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 96 (308)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc--ChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCC
Confidence 467889999999999999999763 36789999987542 3334667999999999999999999999999999
Q ss_pred eeeEEEecccCCChHHHHhcCC-------CCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceE
Q 005864 475 HSFLVYECLERGSLAEILSNDG-------SIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEAR 547 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 547 (673)
..++||||+++|+|.+++.... ....+++..+.+++.|+|+||.|||++ +|+||||||+|||+++++++|
T Consensus 97 ~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~---~ivHrDlk~~NiLld~~~~~K 173 (308)
T d1p4oa_ 97 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 173 (308)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEE
T ss_pred ceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeeceEcCCceeecCCceEE
Confidence 9999999999999999986531 223478999999999999999999999 999999999999999999999
Q ss_pred EecccceeecCCCCCC--ceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCC-CCCccccccccccccccccc
Q 005864 548 VSDFGIAKFLKPGSSN--WTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGK-HPRDFISLLSSSSSNMNLSL 624 (673)
Q Consensus 548 l~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~-~p~~~~~~~~~~~~~~~~~~ 624 (673)
|+|||+++........ .....+|+.|+|||.+.+..++.++||||||+++|||+||. .||...... ...
T Consensus 174 l~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~--------~~~ 245 (308)
T d1p4oa_ 174 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--------QVL 245 (308)
T ss_dssp ECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--------HHH
T ss_pred EeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHH--------HHH
Confidence 9999999876443322 23346899999999999999999999999999999999985 666533221 122
Q ss_pred ccccCCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhhC
Q 005864 625 NEILDPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLCK 673 (673)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~~ 673 (673)
..+.++.....+. ..+..+.+++.+||+.||++||||+||+++|++
T Consensus 246 ~~i~~~~~~~~p~---~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~ 291 (308)
T d1p4oa_ 246 RFVMEGGLLDKPD---NCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 291 (308)
T ss_dssp HHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGG
T ss_pred HHHHhCCCCCCcc---cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 2233333221111 233469999999999999999999999999874
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-46 Score=376.93 Aligned_cols=258 Identities=23% Similarity=0.249 Sum_probs=196.4
Q ss_pred ccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhh--HHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEec
Q 005864 406 AEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEI--SVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYEC 482 (673)
Q Consensus 406 ~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 482 (673)
..+.||+|+||+||+|++. +|+.||||+++....... ...+.+.+|+.++++++|||||++++++.+++..++||||
T Consensus 2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~ 81 (299)
T d1ua2a_ 2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 81 (299)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhh
Confidence 3578999999999999875 699999999875433221 1235688999999999999999999999999999999999
Q ss_pred ccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCCC
Q 005864 483 LERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGSS 562 (673)
Q Consensus 483 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~~ 562 (673)
++++++..+.... ..+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~~~~~~~~~~---~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~ 155 (299)
T d1ua2a_ 82 METDLEVIIKDNS---LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR 155 (299)
T ss_dssp CSEEHHHHHTTCC---SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC
T ss_pred hcchHHhhhhhcc---cCCCHHHHHHHHHHHHHHHHHhhcc---ceecccCCcceEEecCCCccccccCccccccCCCcc
Confidence 9998777666543 4578889999999999999999999 999999999999999999999999999987765555
Q ss_pred CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-------cccccccc-------c
Q 005864 563 NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-------NMNLSLNE-------I 627 (673)
Q Consensus 563 ~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-------~~~~~~~~-------~ 627 (673)
......||+.|+|||.+... .++.++||||+||++|||++|+.||......+.... .....+.. .
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
T d1ua2a_ 156 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYV 235 (299)
T ss_dssp CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCC
T ss_pred cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhh
Confidence 55567899999999988654 579999999999999999999999974332211000 00000000 0
Q ss_pred cCCCCCCCC--cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 628 LDPRLPLPS--RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 628 ~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+... ......+.++.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~ 279 (299)
T d1ua2a_ 236 TFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 279 (299)
T ss_dssp CCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence 000011000 000122356899999999999999999999986
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-46 Score=374.41 Aligned_cols=262 Identities=22% Similarity=0.328 Sum_probs=201.0
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|.+ .+|+.||||+++.... .....+.+.+|++++++++|||||++++++.+++..++||
T Consensus 2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~ 80 (298)
T d1gz8a_ 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 80 (298)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-ChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEE
Confidence 5789999999999999999976 5799999999975432 2233567899999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
||+.++ +.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.|+.....
T Consensus 81 e~~~~~-~~~~~~~~~-~~~l~e~~~~~~~~qil~~L~yLH~~---~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~ 155 (298)
T d1gz8a_ 81 EFLHQD-LKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 155 (298)
T ss_dssp ECCSEE-HHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred eecCCc-hhhhhhhhc-ccCCCHHHHHHHHHHHHHHHHHhhcC---CEEccccCchheeecccCcceeccCCcceeccCC
Confidence 999875 444443332 24589999999999999999999999 9999999999999999999999999999887665
Q ss_pred CCCceecccccccccccccccCC-cCcchhHHHHHHHHHHHHhCCCCCcccccccccc-------ccccccc---cccc-
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS-------SNMNLSL---NEIL- 628 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~-------~~~~~~~---~~~~- 628 (673)
........||+.|+|||.+.... ++.++||||+||++|||++|+.||......+... ...+... ....
T Consensus 156 ~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (298)
T d1gz8a_ 156 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235 (298)
T ss_dssp SBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred cccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccc
Confidence 55556678999999999877665 5789999999999999999999997543211100 0000000 0000
Q ss_pred -CCCCC-CCCcch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 629 -DPRLP-LPSRNI----QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 629 -~~~~~-~~~~~~----~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
....+ ...... ...+.++.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~ 282 (298)
T d1gz8a_ 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282 (298)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 00000 000111 122356889999999999999999999986
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.4e-47 Score=373.55 Aligned_cols=242 Identities=22% Similarity=0.361 Sum_probs=198.4
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhh---HHHHHHHHHHHHHhccC--CCcccceeeeeecCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEI---SVQREFLNEIKALTEIR--HRNIVKFYGFCSHPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~---~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~ 475 (673)
++|++.+.||+|+||+||+|+. .+|+.||||++......+. ....++.+|+.++++++ |||||++++++.+++.
T Consensus 4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~ 83 (273)
T d1xwsa_ 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 83 (273)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence 5799999999999999999976 4799999999875432221 12244678999999996 8999999999999999
Q ss_pred eeEEEecccC-CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCC-CceEEecccc
Q 005864 476 SFLVYECLER-GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSE-YEARVSDFGI 553 (673)
Q Consensus 476 ~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~ 553 (673)
.++||||+.+ +++.+++... ..+++.++..++.|+++||+|||++ +|+||||||+||+++.+ +.+||+|||+
T Consensus 84 ~~lv~e~~~~~~~l~~~~~~~---~~l~e~~~~~~~~qi~~al~~lH~~---~iiHrDiKp~NIll~~~~~~vkl~DFG~ 157 (273)
T d1xwsa_ 84 FVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGS 157 (273)
T ss_dssp EEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEEeccCcchHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccccCcccceEEecCCCeEEECcccc
Confidence 9999999976 6888888765 3588999999999999999999999 99999999999999854 7999999999
Q ss_pred eeecCCCCCCceecccccccccccccccCCc-CcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCC
Q 005864 554 AKFLKPGSSNWTEFAGTFGYVAPELAYTMKV-TEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRL 632 (673)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (673)
|+.... ...+...||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... .....
T Consensus 158 a~~~~~--~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~i--------------~~~~~ 221 (273)
T d1xwsa_ 158 GALLKD--TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEI--------------IRGQV 221 (273)
T ss_dssp CEECCS--SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHH--------------HHCCC
T ss_pred ceeccc--ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchHH--------------hhccc
Confidence 987543 23455789999999999987765 56789999999999999999999743211 11111
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..+.. .+.++.+++.+||+.||++|||++|+++
T Consensus 222 ~~~~~----~s~~~~~li~~~L~~dp~~R~s~~eil~ 254 (273)
T d1xwsa_ 222 FFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQN 254 (273)
T ss_dssp CCSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCC----CCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence 22211 2345889999999999999999999986
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.9e-46 Score=374.51 Aligned_cols=261 Identities=23% Similarity=0.328 Sum_probs=201.0
Q ss_pred cCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEEe
Q 005864 402 KNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVYE 481 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 481 (673)
++|++.+.||+|+||+||+|++++|+.||||+++..... ....+.+.+|+.++++++|||||++++++..++..++++|
T Consensus 2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e 80 (286)
T d1ob3a_ 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED-EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE 80 (286)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG-GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcC-hHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEE
Confidence 578999999999999999999999999999999765332 2345789999999999999999999999999999999999
Q ss_pred cccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCCC
Q 005864 482 CLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPGS 561 (673)
Q Consensus 482 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~~ 561 (673)
|+.++.+..+.... ..+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+|++|||.+.......
T Consensus 81 ~~~~~~~~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~ 154 (286)
T d1ob3a_ 81 HLDQDLKKLLDVCE---GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (286)
T ss_dssp CCSEEHHHHHHTST---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred eehhhhHHHHHhhc---CCcchhhhHHHHHHHHHHHHHhccC---cEEecCCCCceeeEcCCCCEEecccccceecccCc
Confidence 99987777766544 4589999999999999999999999 99999999999999999999999999998776554
Q ss_pred CCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-------cccc------cc---
Q 005864 562 SNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-------NMNL------SL--- 624 (673)
Q Consensus 562 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-------~~~~------~~--- 624 (673)
.......+++.|+|||.+.+. .++.++||||+||++|||++|+.||......+.... .... ..
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T d1ob3a_ 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (286)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhc
Confidence 444556789999999998754 568999999999999999999999974432111000 0000 00
Q ss_pred ccccCCCCCCC-CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 625 NEILDPRLPLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 625 ~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........+.+ .......+..+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~ 280 (286)
T d1ob3a_ 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (286)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000000000 0111122346889999999999999999999984
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-45 Score=370.22 Aligned_cols=262 Identities=19% Similarity=0.275 Sum_probs=195.8
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CC-CCEEEEEeeccchhhhhHHHHHHHHHHHHHhcc---CCCcccceeeeeec---
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PS-GEVVAVKKFHSLLLSEISVQREFLNEIKALTEI---RHRNIVKFYGFCSH--- 472 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~--- 472 (673)
.++|++.+.||+|+||+||+|++ ++ ++.||||+++.....+. ....+.+|+.+++.+ +||||++++++|..
T Consensus 6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~ 84 (305)
T d1blxa_ 6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG-MPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84 (305)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS-CBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccch-HHHHHHHHHHHHHHHhhcCCCCcceeeeeeccccc
Confidence 46899999999999999999986 34 66799999876433221 223455677766655 79999999999853
Q ss_pred --CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEec
Q 005864 473 --PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSD 550 (673)
Q Consensus 473 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 550 (673)
....++++||++++++........ ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~~qi~~aL~yLH~~---~ivHrDiKp~NILi~~~~~~kl~d 159 (305)
T d1blxa_ 85 DRETKLTLVFEHVDQDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLAD 159 (305)
T ss_dssp SSEEEEEEEEECCSCBHHHHHHHSCT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECS
T ss_pred ccCceEEEEEEeccCCchhhhhhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEecCCCccEEEEcCCCCeeecc
Confidence 346789999999987765554433 4588899999999999999999999 999999999999999999999999
Q ss_pred ccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------cc--
Q 005864 551 FGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------MN-- 621 (673)
Q Consensus 551 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~~-- 621 (673)
||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||......+..... ..
T Consensus 160 fg~~~~~~~~-~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 238 (305)
T d1blxa_ 160 FGLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 238 (305)
T ss_dssp CCSCCCCCGG-GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred hhhhhhhccc-ccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhc
Confidence 9998754322 2345678999999999999999999999999999999999999999754321110000 00
Q ss_pred -----cccccccCCCCCC-CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 622 -----LSLNEILDPRLPL-PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 622 -----~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
............. ........+..+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~ 292 (305)
T d1blxa_ 239 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 292 (305)
T ss_dssp SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0000000001000 00111123345889999999999999999999975
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-44 Score=365.12 Aligned_cols=259 Identities=21% Similarity=0.288 Sum_probs=195.0
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC----ee
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR----HS 476 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~ 476 (673)
.+|++.+.||+|+||+||+|.. .+|+.||||++.... .....+.+.+|+++|++++||||+++++++.... ..
T Consensus 8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~ 85 (345)
T d1pmea_ 8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 85 (345)
T ss_dssp TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT--CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc--ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccce
Confidence 4689999999999999999975 579999999987542 3344678899999999999999999999996543 23
Q ss_pred eEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 477 FLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 477 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
+++++|+.+|+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 86 ~~l~~~~~~g~L~~~l~~~----~l~~~~i~~i~~qil~al~yLH~~---~iiHRDIKp~NILl~~~~~~kl~DfG~a~~ 158 (345)
T d1pmea_ 86 VYLVTHLMGADLYKLLKTQ----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARV 158 (345)
T ss_dssp EEEEEECCCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEeecCCchhhhhhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCcceEEECCCCCEEEcccCceee
Confidence 4555667899999999764 489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCC---Cceecccccccccccccc-cCCcCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------cc---
Q 005864 557 LKPGSS---NWTEFAGTFGYVAPELAY-TMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM-------NL--- 622 (673)
Q Consensus 557 ~~~~~~---~~~~~~~~~~y~aPE~~~-~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~-------~~--- 622 (673)
...... ......||+.|+|||.+. +..++.++||||+||++|||++|+.||......+...... ..
T Consensus 159 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (345)
T d1pmea_ 159 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 238 (345)
T ss_dssp CCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred ccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhh
Confidence 644322 234467899999999985 4567889999999999999999999997433211100000 00
Q ss_pred -----cccc--ccCCCCCCCC--cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 623 -----SLNE--ILDPRLPLPS--RNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 623 -----~~~~--~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.... ...+...... ......+.++.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~ 294 (345)
T d1pmea_ 239 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 294 (345)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000 0000000000 001112346889999999999999999999986
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-43 Score=353.46 Aligned_cols=261 Identities=18% Similarity=0.256 Sum_probs=206.0
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCCeeeEEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPRHSFLVY 480 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 480 (673)
++|++.+.||+|+||+||+|++ .+|+.||||+++.... .......+.+|+.+++.++||||+++++++.+++..++|+
T Consensus 2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~ 80 (292)
T d1unla_ 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhC-ChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEe
Confidence 4789999999999999999976 4789999999865532 3345778999999999999999999999999999999999
Q ss_pred ecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccceeecCCC
Q 005864 481 ECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKFLKPG 560 (673)
Q Consensus 481 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~~~~~ 560 (673)
|++.++++..++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|++|||.++.....
T Consensus 81 ~~~~~~~l~~~~~~~---~~~~~~~~~~~~~q~~~aL~~lH~~---~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~ 154 (292)
T d1unla_ 81 EFCDQDLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp ECCSEEHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSC
T ss_pred eeccccccccccccc---cccchhHHHHHHHHHHHHHHHhhcC---CEeeecccCcccccccCCceeeeecchhhcccCC
Confidence 999999999888765 3478899999999999999999999 9999999999999999999999999999987665
Q ss_pred CCCceecccccccccccccccCC-cCcchhHHHHHHHHHHHHhCCCCCccccccccc--------ccccccc---ccccc
Q 005864 561 SSNWTEFAGTFGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS--------SSNMNLS---LNEIL 628 (673)
Q Consensus 561 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~--------~~~~~~~---~~~~~ 628 (673)
........+++.|+|||.+.... ++.++||||+||++|||++|+.||......... ....... .....
T Consensus 155 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (292)
T d1unla_ 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred CccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcc
Confidence 55555667888999999887665 689999999999999999999996422111000 0000000 00000
Q ss_pred -------CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 629 -------DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 629 -------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.+............+..+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~ 282 (292)
T d1unla_ 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred cccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000111111223456889999999999999999999975
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-43 Score=363.23 Aligned_cols=255 Identities=20% Similarity=0.278 Sum_probs=192.9
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecCC------
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHPR------ 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 474 (673)
++|++.+.||+|+||+||+|.+ .+|+.||||+++.... .....+.+.+|+++|++++|||||+++++|...+
T Consensus 18 ~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~ 96 (346)
T d1cm8a_ 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ-SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 96 (346)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS-SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred CcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhc-ChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence 5789999999999999999976 4699999999976433 3345678899999999999999999999997654
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..++||||+ +++|..+.+.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+|++|||+|
T Consensus 97 ~~~lv~e~~-~~~l~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~IiHrDiKp~NIL~~~~~~~kl~Dfg~a 168 (346)
T d1cm8a_ 97 DFYLVMPFM-GTDLGKLMKHE----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLA 168 (346)
T ss_dssp CCEEEEECC-SEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEecc-cccHHHHHHhc----cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCcchhhcccccccccccccce
Confidence 469999999 55788877653 489999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccc-------c------
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSN-------M------ 620 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-------~------ 620 (673)
+.... ..+...||+.|+|||.+.+. .++.++||||+||++|||++|+.||............ .
T Consensus 169 ~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (346)
T d1cm8a_ 169 RQADS---EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 245 (346)
T ss_dssp EECCS---SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred eccCC---ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhh
Confidence 87643 23456799999999998764 5689999999999999999999999743221110000 0
Q ss_pred -----ccccccccCCCCCC--CCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 -----NLSLNEILDPRLPL--PSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 -----~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
........ +.... ........+..+.+++.+||..||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~ 300 (346)
T d1cm8a_ 246 LQSDEAKNYMKGL-PELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 300 (346)
T ss_dssp CSCHHHHHHHHHS-CCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hcchhhhhhhccC-CcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00000000 00000 00011122345789999999999999999999986
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.9e-43 Score=354.89 Aligned_cols=260 Identities=22% Similarity=0.280 Sum_probs=194.0
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec--------
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH-------- 472 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 472 (673)
++|++.+.||+|+||+||+|++ .+|+.||||++...... ....+.+.+|+.+|++++||||+++++++..
T Consensus 10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~-~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~ 88 (318)
T d3blha1 10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEK-EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 88 (318)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CT-TSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcc-hHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence 6799999999999999999976 57999999998654332 2345678899999999999999999999855
Q ss_pred CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccc
Q 005864 473 PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFG 552 (673)
Q Consensus 473 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 552 (673)
++..++||||++++.+....... ..+++..++.++.|++.||.|||++ +|+||||||+||+++.++.+|++|||
T Consensus 89 ~~~~~iv~e~~~~~~~~~~~~~~---~~~~~~~~~~i~~qil~~l~~lH~~---~ivHrDlKp~NILl~~~~~~kl~dfg 162 (318)
T d3blha1 89 KGSIYLVFDFCEHDLAGLLSNVL---VKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 162 (318)
T ss_dssp --CEEEEEECCCEEHHHHHTCTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCT
T ss_pred CceEEEEEeccCCCccchhhhcc---cccccHHHHHHHHHHHHHHHHhccC---CEEecCcCchheeecCCCcEEeeecc
Confidence 34578999999987766554433 4578888999999999999999999 99999999999999999999999999
Q ss_pred ceeecCCCCC----CceecccccccccccccccC-CcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-------cc
Q 005864 553 IAKFLKPGSS----NWTEFAGTFGYVAPELAYTM-KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-------NM 620 (673)
Q Consensus 553 ~~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-------~~ 620 (673)
+++....... ......||+.|+|||.+.+. .++.++||||+||++|||++|+.||........... ..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~ 242 (318)
T d3blha1 163 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 242 (318)
T ss_dssp TCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred eeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 9987653321 22335689999999998755 689999999999999999999999974322111000 00
Q ss_pred cc--------ccccccCCCCCCCCcchHH------HHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 NL--------SLNEILDPRLPLPSRNIQD------KLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 ~~--------~~~~~~~~~~~~~~~~~~~------~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.. ....... ..........+ ....+.+++.+||+.||++|||++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~ 304 (318)
T d3blha1 243 PEVWPNVDNYELYEKLE-LVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 304 (318)
T ss_dssp TTTSTTCCCC--------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hhhccccchhhhhhhhc-ccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence 00 0000000 00111111111 1345778999999999999999999986
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-44 Score=366.85 Aligned_cols=256 Identities=23% Similarity=0.256 Sum_probs=191.8
Q ss_pred CCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC------Ce
Q 005864 403 NFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP------RH 475 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~ 475 (673)
+|+..++||+|+||+||+|++. +|+.||||++..... .+.+|++++++++|||||++++++... ..
T Consensus 21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-------~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~ 93 (350)
T d1q5ka_ 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVY 93 (350)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-------SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCE
T ss_pred CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch-------HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceE
Confidence 5778899999999999999875 699999999865421 234699999999999999999998542 34
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-ceEEecccce
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-EARVSDFGIA 554 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~ 554 (673)
.++||||++++.+..+.........+++.++..++.||+.||+|||++ +|+||||||+|||++.++ .+||+|||++
T Consensus 94 ~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~---~IiHrDiKp~NILl~~~~~~~kl~DFG~a 170 (350)
T d1q5ka_ 94 LNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 170 (350)
T ss_dssp EEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTTCCEEECCCTTC
T ss_pred EEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc---CCcccCCCcceEEEecCCCceeEecccch
Confidence 689999998765444443322335689999999999999999999999 999999999999999775 8999999999
Q ss_pred eecCCCCCCceeccccccccccccccc-CCcCcchhHHHHHHHHHHHHhCCCCCccccccccccc-------ccccc---
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYT-MKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSS-------NMNLS--- 623 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~-------~~~~~--- 623 (673)
+...... ......|++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+.... .....
T Consensus 171 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~ 249 (350)
T d1q5ka_ 171 KQLVRGE-PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 249 (350)
T ss_dssp EECCTTS-CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred hhccCCc-ccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhh
Confidence 8775433 3344678999999998765 5689999999999999999999999964332111000 00000
Q ss_pred -cccccCCCCCCC------CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 624 -LNEILDPRLPLP------SRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 624 -~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
.....+..++.. .......+.++.+++.+||..||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 302 (350)
T d1q5ka_ 250 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 302 (350)
T ss_dssp HCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 000001111100 0011123446889999999999999999999985
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-44 Score=363.22 Aligned_cols=254 Identities=22% Similarity=0.306 Sum_probs=202.2
Q ss_pred cCCCccceeccCCcEEEEEEEe----CCCCEEEEEeeccchhh-hhHHHHHHHHHHHHHhccCC-CcccceeeeeecCCe
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL----PSGEVVAVKKFHSLLLS-EISVQREFLNEIKALTEIRH-RNIVKFYGFCSHPRH 475 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~ 475 (673)
++|++.+.||+|+||+||+|.. .+|+.||||.++..... +....+.+.+|++++++++| |||+++++++.+...
T Consensus 24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~ 103 (322)
T d1vzoa_ 24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 103 (322)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence 5699999999999999999965 25889999998754321 22235668899999999976 899999999999999
Q ss_pred eeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEeccccee
Q 005864 476 SFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIAK 555 (673)
Q Consensus 476 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~ 555 (673)
.++|+||+.+|+|.+++...+ .++...+..++.|++.|++|+|+. +|+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~v~e~~~~~~L~~~i~~~~---~~~e~~~~~~~~Qi~~al~~lH~~---~ivHrDiKp~Nill~~~~~vkL~DFG~a~ 177 (322)
T d1vzoa_ 104 LHLILDYINGGELFTHLSQRE---RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSK 177 (322)
T ss_dssp EEEEECCCCSCBHHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eeeeeecccccHHHHHHHhcc---cccHHHHHHHHHHHHHHHHHhhcC---CEEeccCCccceeecCCCCEEEeeccchh
Confidence 999999999999999998764 356788889999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCC-CceecccccccccccccccC--CcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccCCCC
Q 005864 556 FLKPGSS-NWTEFAGTFGYVAPELAYTM--KVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILDPRL 632 (673)
Q Consensus 556 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (673)
.+..... ......|++.|+|||.+.+. .++.++||||+||++|||++|+.||......+.. ............
T Consensus 178 ~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~----~~i~~~~~~~~~ 253 (322)
T d1vzoa_ 178 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ----AEISRRILKSEP 253 (322)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCH----HHHHHHHHHCCC
T ss_pred hhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHHhcccCCC
Confidence 7643322 23456789999999998754 4688999999999999999999999744322111 111111222223
Q ss_pred CCCCcchHHHHHHHHHHHHHcccCCCCCCC-----CHHHHHH
Q 005864 633 PLPSRNIQDKLISILEVALLCLEESPESRP-----TMQTVCQ 669 (673)
Q Consensus 633 ~~~~~~~~~~~~~l~~li~~cl~~dp~~Rp-----s~~~v~~ 669 (673)
+.+. ..+.++.+++.+||++||++|| |++|+++
T Consensus 254 ~~~~----~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~ 291 (322)
T d1vzoa_ 254 PYPQ----EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 291 (322)
T ss_dssp CCCT----TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred CCcc----cCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence 3222 2345689999999999999999 4888875
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.3e-43 Score=351.77 Aligned_cols=255 Identities=18% Similarity=0.229 Sum_probs=194.0
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccce-eeeeecCCeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKF-YGFCSHPRHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l-~~~~~~~~~~~lv 479 (673)
++|++.+.||+|+||+||+|++ .+|+.||||++..... ..++..|+++++.++|++++.. .+++.+++..++|
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~iv 81 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 81 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTT-----SCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEE
T ss_pred CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhcc-----CHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEE
Confidence 5799999999999999999976 4689999998765422 2357789999999987765555 5555777888999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC---CCceEEecccceee
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS---EYEARVSDFGIAKF 556 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~~~~ 556 (673)
|||+. |++.+.+.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++. +..+|++|||+|+.
T Consensus 82 me~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~ 155 (299)
T d1ckia_ 82 MELLG-PSLEDLFNFCS--RKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 155 (299)
T ss_dssp EECCC-CBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCSSCEE
T ss_pred EEEcC-Cchhhhhhhcc--CCCcHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHhhccccccCCCceeeeeccCccee
Confidence 99985 46766665543 4589999999999999999999999 9999999999999864 45799999999998
Q ss_pred cCCCCC-------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccccC
Q 005864 557 LKPGSS-------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEILD 629 (673)
Q Consensus 557 ~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 629 (673)
+..... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||............ .....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~-----~~~~~ 230 (299)
T d1ckia_ 156 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY-----ERISE 230 (299)
T ss_dssp CBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------H-----HHHHH
T ss_pred ccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHH-----HHhhc
Confidence 754322 223457999999999999999999999999999999999999999744322111100 00000
Q ss_pred CCCCCCC-cchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 630 PRLPLPS-RNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 630 ~~~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
.....+. ......+.++.+++..||+.+|++||+++++.+.|+
T Consensus 231 ~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 274 (299)
T d1ckia_ 231 KKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFR 274 (299)
T ss_dssp HHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHH
T ss_pred ccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHH
Confidence 0000000 001123356899999999999999999999988775
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=2.3e-42 Score=351.97 Aligned_cols=252 Identities=22% Similarity=0.313 Sum_probs=195.1
Q ss_pred cCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeec--CCeee
Q 005864 402 KNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSH--PRHSF 477 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~ 477 (673)
++|++.+.||+|+||+||+|+. .+|+.||||+++.. ..+++.+|+++|.+++ ||||+++++++.. ....+
T Consensus 35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~------~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~ 108 (328)
T d3bqca1 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 108 (328)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEE
T ss_pred cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH------HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCcee
Confidence 5799999999999999999977 47999999998653 2456889999999995 9999999999974 45689
Q ss_pred EEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCC-ceEEecccceee
Q 005864 478 LVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEY-EARVSDFGIAKF 556 (673)
Q Consensus 478 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~~~~ 556 (673)
+||||+++|+|.++. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++ .+|++|||+|+.
T Consensus 109 ~v~e~~~~~~L~~~~------~~l~e~~i~~i~~qil~aL~~LH~~---gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~ 179 (328)
T d3bqca1 109 LVFEHVNNTDFKQLY------QTLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEF 179 (328)
T ss_dssp EEEECCCSCBGGGTT------TSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCGGGCEE
T ss_pred EEEeecCCCcHHHHh------cCCCHHHHHHHHHHHHHHHHHHhhc---ccccccccccceEEcCCCCeeeeccccccee
Confidence 999999999998764 2488899999999999999999999 999999999999998654 699999999987
Q ss_pred cCCCCCCceecccccccccccccccCC-cCcchhHHHHHHHHHHHHhCCCCCccccccccc-------------------
Q 005864 557 LKPGSSNWTEFAGTFGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS------------------- 616 (673)
Q Consensus 557 ~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~------------------- 616 (673)
..... ......+|+.|+|||.+.+.. ++.++||||+||++|||++|+.||.........
T Consensus 180 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~ 258 (328)
T d3bqca1 180 YHPGQ-EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 258 (328)
T ss_dssp CCTTC-CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred ccCCC-cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhh
Confidence 75443 335567899999999987654 799999999999999999999998632211000
Q ss_pred -ccccccccccccCCCCC------CCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 617 -SSNMNLSLNEILDPRLP------LPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 617 -~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
................. .........+.++.+++.+||+.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~ 318 (328)
T d3bqca1 259 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 318 (328)
T ss_dssp TTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000000000000000 001111223456889999999999999999999986
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=1.2e-42 Score=347.00 Aligned_cols=255 Identities=18% Similarity=0.247 Sum_probs=200.4
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCC-CcccceeeeeecCCeeeEE
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRH-RNIVKFYGFCSHPRHSFLV 479 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv 479 (673)
++|++.+.||+|+||+||+|++. +|+.||||++..... ...+.+|++.+..++| +|++.+++++.++...++|
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~v 79 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD-----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 79 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT-----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccC-----cHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEE
Confidence 57999999999999999999865 689999998755321 2346678889999965 8999999999999999999
Q ss_pred EecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCC-----CCceEEecccce
Q 005864 480 YECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSS-----EYEARVSDFGIA 554 (673)
Q Consensus 480 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~-----~~~~kl~Dfg~~ 554 (673)
|||+ +++|.+++...+ ..+++.++..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||+|
T Consensus 80 me~~-~~~l~~~~~~~~--~~~~~~~~~~i~~q~~~~l~~lH~~---giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a 153 (293)
T d1csna_ 80 IDLL-GPSLEDLLDLCG--RKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 153 (293)
T ss_dssp EECC-CCBHHHHHHHTT--TCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred EEec-CCCHHHHHHhhc--cchhhHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeecCcccccCCceEEccccee
Confidence 9998 679999987654 4588999999999999999999999 9999999999999974 567999999999
Q ss_pred eecCCCCC-------CceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccccccccccccc
Q 005864 555 KFLKPGSS-------NWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNMNLSLNEI 627 (673)
Q Consensus 555 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 627 (673)
+....... ......||+.|+|||.+.+..++.++||||||+++|||+||+.||......... .....+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~-----~~~~~i 228 (293)
T d1csna_ 154 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK-----QKYERI 228 (293)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH-----HHHHHH
T ss_pred EEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHH-----HHHHHH
Confidence 98754321 223467999999999999999999999999999999999999999743221110 000011
Q ss_pred cCCCCCCC-CcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHHHhh
Q 005864 628 LDPRLPLP-SRNIQDKLISILEVALLCLEESPESRPTMQTVCQLLC 672 (673)
Q Consensus 628 ~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~~L~ 672 (673)
...+...+ .......+.++.+++..|++.+|++||+++.+.+.|+
T Consensus 229 ~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~ 274 (293)
T d1csna_ 229 GEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFS 274 (293)
T ss_dssp HHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHH
T ss_pred HhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHH
Confidence 00000000 0000122346889999999999999999998887764
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-42 Score=353.34 Aligned_cols=257 Identities=19% Similarity=0.285 Sum_probs=191.1
Q ss_pred cCCCccceeccCCcEEEEEEEeC-CCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeec------CC
Q 005864 402 KNFDAEQCIGIGGQASVYRGELP-SGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSH------PR 474 (673)
Q Consensus 402 ~~~~~~~~ig~G~~g~vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~ 474 (673)
++|++.+.||+|+||+||+|++. +|+.||||++..... .....+.+.+|+.++++++|||||++++++.. ..
T Consensus 17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~-~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~ 95 (355)
T d2b1pa1 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 95 (355)
T ss_dssp TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhc-CHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCc
Confidence 57999999999999999999875 699999999976543 33446778999999999999999999999964 36
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..|+||||+.++.+ +.+. ..+++..++.++.||+.||+|||+. ||+||||||+||+++.++.+|++|||++
T Consensus 96 ~~~iv~Ey~~~~l~-~~~~-----~~~~~~~i~~~~~qil~gl~~LH~~---giiHrDlKP~Nil~~~~~~~kl~df~~~ 166 (355)
T d2b1pa1 96 DVYLVMELMDANLC-QVIQ-----MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_dssp EEEEEEECCSEEHH-HHHT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred eeEEEEeccchHHH-Hhhh-----cCCCHHHHHHHHHHHHHHHHHhhhc---ccccccCCccccccccccceeeechhhh
Confidence 78999999987544 4443 2378899999999999999999999 9999999999999999999999999998
Q ss_pred eecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCcccccccccc--------------ccc
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSS--------------SNM 620 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~--------------~~~ 620 (673)
+..... .......+|+.|+|||++.+..+++++||||+||++|||++|+.||...+...... ...
T Consensus 167 ~~~~~~-~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~ 245 (355)
T d2b1pa1 167 RTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL 245 (355)
T ss_dssp ---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTS
T ss_pred hccccc-cccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHh
Confidence 865432 23355678999999999999999999999999999999999999995332110000 000
Q ss_pred ccccc---------------ccc-CCCCCCCCcchHHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 NLSLN---------------EIL-DPRLPLPSRNIQDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 ~~~~~---------------~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..... ... +.............+.++.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~ 310 (355)
T d2b1pa1 246 QPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 310 (355)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00000 000 11111112233445678999999999999999999999985
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-42 Score=352.84 Aligned_cols=258 Identities=19% Similarity=0.278 Sum_probs=194.8
Q ss_pred hcCCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcccceeeeeecC-----C
Q 005864 401 TKNFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNIVKFYGFCSHP-----R 474 (673)
Q Consensus 401 ~~~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 474 (673)
.++|++.+.||+|+||+||+|++ .+|+.||||+++.... .....+.+.+|++++++++|||+|++++++... .
T Consensus 17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~ 95 (348)
T d2gfsa1 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ-SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 95 (348)
T ss_dssp ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTS-SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTC
T ss_pred CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhc-ChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccC
Confidence 35799999999999999999976 5799999999976533 333456788999999999999999999998643 3
Q ss_pred eeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEecccce
Q 005864 475 HSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVSDFGIA 554 (673)
Q Consensus 475 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~ 554 (673)
..+++++|+.+|+|.+++... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+|++|||++
T Consensus 96 ~~~~i~~~~~gg~L~~~~~~~----~l~e~~~~~i~~qil~aL~~LH~~---giiHrDiKp~NILi~~~~~~kl~dfg~a 168 (348)
T d2gfsa1 96 NDVYLVTHLMGADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 168 (348)
T ss_dssp CCCEEEEECCSEEHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCC---
T ss_pred ceEEEEEeecCCchhhhcccc----cccHHHHHHHHHHHHHHHHHHHhC---CCcccccCCccccccccccccccccchh
Confidence 456777888999999999653 489999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCCceecccccccccccccccCC-cCcchhHHHHHHHHHHHHhCCCCCccccccccccccc-------------
Q 005864 555 KFLKPGSSNWTEFAGTFGYVAPELAYTMK-VTEKCDVYSFGVLALEVIKGKHPRDFISLLSSSSSNM------------- 620 (673)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~------------- 620 (673)
.... .......|++.|+|||...+.. ++.++||||+||++|||++|+.||.............
T Consensus 169 ~~~~---~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~ 245 (348)
T d2gfsa1 169 RHTD---DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 245 (348)
T ss_dssp -CCT---GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred cccC---cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhh
Confidence 7543 2334567899999999876654 6889999999999999999999996432211100000
Q ss_pred --ccccccccCCCCCCCCcch----HHHHHHHHHHHHHcccCCCCCCCCHHHHHH
Q 005864 621 --NLSLNEILDPRLPLPSRNI----QDKLISILEVALLCLEESPESRPTMQTVCQ 669 (673)
Q Consensus 621 --~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dp~~Rps~~~v~~ 669 (673)
..............+.... ...+.++.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~ 300 (348)
T d2gfsa1 246 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 300 (348)
T ss_dssp CCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence 0000000000001111111 122356889999999999999999999986
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.4e-37 Score=321.59 Aligned_cols=257 Identities=19% Similarity=0.210 Sum_probs=188.3
Q ss_pred CCCccceeccCCcEEEEEEEe-CCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-----------CCcccceeeee
Q 005864 403 NFDAEQCIGIGGQASVYRGEL-PSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-----------HRNIVKFYGFC 470 (673)
Q Consensus 403 ~~~~~~~ig~G~~g~vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~~ 470 (673)
+|++++.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+.+++.++ |+||+++++++
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~----~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~ 89 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 89 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH----HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc----cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEe
Confidence 589999999999999999976 479999999987542 22456778888888775 57899999988
Q ss_pred ec--CCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEeCCCC---
Q 005864 471 SH--PRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHH-DCFPPIVHRDISSKNVLLSSEY--- 544 (673)
Q Consensus 471 ~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~--- 544 (673)
.. ....+++++++..+..............+++..+..++.||+.||+|||+ . +|+||||||+|||++.++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~---~IvHrDlKp~NIll~~~~~~~ 166 (362)
T d1q8ya_ 90 NHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPE 166 (362)
T ss_dssp EEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CEECSCCSGGGEEEEEEETTT
T ss_pred eeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhc---CcccccCChhHeeeeccCccc
Confidence 64 34566777766655444333333334568889999999999999999998 6 999999999999998654
Q ss_pred ---ceEEecccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHHHHHHhCCCCCccccccccc-----
Q 005864 545 ---EARVSDFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLALEVIKGKHPRDFISLLSSS----- 616 (673)
Q Consensus 545 ---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~----- 616 (673)
.++++|||.+..... ......||+.|+|||++....++.++||||+||+++||++|+.||.........
T Consensus 167 ~~~~~kl~dfg~s~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~ 243 (362)
T d1q8ya_ 167 NLIQIKIADLGNACWYDE---HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 243 (362)
T ss_dssp TEEEEEECCCTTCEETTB---CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred ccceeeEeeccccccccc---ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHH
Confidence 399999999986532 224467999999999999999999999999999999999999998633211000
Q ss_pred --------ccccc------cccccccC-----CCCC------------CCCcchHHHHHHHHHHHHHcccCCCCCCCCHH
Q 005864 617 --------SSNMN------LSLNEILD-----PRLP------------LPSRNIQDKLISILEVALLCLEESPESRPTMQ 665 (673)
Q Consensus 617 --------~~~~~------~~~~~~~~-----~~~~------------~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ 665 (673)
+.... .......+ .... .........+.++.+++.+|+..||.+|||++
T Consensus 244 ~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~ 323 (362)
T d1q8ya_ 244 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 323 (362)
T ss_dssp HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHH
T ss_pred HHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHH
Confidence 00000 00000000 0000 01122345667899999999999999999999
Q ss_pred HHHH
Q 005864 666 TVCQ 669 (673)
Q Consensus 666 ~v~~ 669 (673)
|+++
T Consensus 324 e~L~ 327 (362)
T d1q8ya_ 324 GLVN 327 (362)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9986
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.96 E-value=6e-30 Score=258.31 Aligned_cols=237 Identities=30% Similarity=0.495 Sum_probs=138.8
Q ss_pred cccCCCCCccEEEccC-CccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCC
Q 005864 82 EVFGIYPNLTFLDISH-NNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLK 160 (673)
Q Consensus 82 ~~~~~l~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~ 160 (673)
..+.++++|++|+|++ |.+.+..|..++++++|++|+|++|++.+..+..+..+..|+.+++++|.+...+|..+..++
T Consensus 70 ~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~~~~~~p~~l~~l~ 149 (313)
T d1ogqa_ 70 SSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLP 149 (313)
T ss_dssp GGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCT
T ss_pred hHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhcccccccccccccCchhhccCc
Confidence 3444444444444443 344444444444445555555555555444444455555555555555555555555555555
Q ss_pred CCCEEEccCccccccCCccccCCCCC-CEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEee
Q 005864 161 SLNYLVLNGNKLSGNLPRVLGSLSEL-EYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDL 239 (673)
Q Consensus 161 ~L~~L~L~~n~l~~~~~~~l~~l~~L-~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 239 (673)
.|+.+++++|.+++.+|..+..+.++ +.++++.|++++..|..+..+.. ..++++.|...+..|..+..+++|+.+++
T Consensus 150 ~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~-~~l~l~~~~~~~~~~~~~~~~~~l~~l~~ 228 (313)
T d1ogqa_ 150 NLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNL-AFVDLSRNMLEGDASVLFGSDKNTQKIHL 228 (313)
T ss_dssp TCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCC-SEEECCSSEEEECCGGGCCTTSCCSEEEC
T ss_pred ccceeecccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccc
Confidence 55555555555555555555555443 55566666665555555555433 35666666666666666666666666666
Q ss_pred cCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCcccccCccccccCCcCCCCC
Q 005864 240 SHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPIQALRGNRGLCGD 319 (673)
Q Consensus 240 s~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~n~~~c~~ 319 (673)
++|.+.+.+ ..+..+++|+.|+|++|++++.+|..|..+++|++|+|++|+|+|.+|............+.+|+.+||.
T Consensus 229 ~~~~l~~~~-~~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~~~L~~L~~l~l~~N~~l~g~ 307 (313)
T d1ogqa_ 229 AKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp CSSEECCBG-GGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEEST
T ss_pred ccccccccc-cccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCCcccCCCCCHHHhCCCccccCC
Confidence 666666443 3466666777777777777766676677777777777777777766666555555666667777777776
Q ss_pred C
Q 005864 320 V 320 (673)
Q Consensus 320 ~ 320 (673)
|
T Consensus 308 p 308 (313)
T d1ogqa_ 308 P 308 (313)
T ss_dssp T
T ss_pred C
Confidence 5
|
| >d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Polygalacturonase inhibiting protein PGIP domain: Polygalacturonase inhibiting protein PGIP species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.96 E-value=3.7e-30 Score=259.86 Aligned_cols=252 Identities=31% Similarity=0.486 Sum_probs=193.4
Q ss_pred CCCEEEcccCcccc--ccCccccCCCCCcEEEccC-cccccccccccCCCCCccEEEccCCccccccccCccccCCCcEE
Q 005864 41 QLTNLEIDNNQLFG--QIPRSLRNLASLNRVHLEQ-NHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTL 117 (673)
Q Consensus 41 ~L~~L~L~~n~i~~--~~~~~l~~l~~L~~L~L~~-n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 117 (673)
+++.|+|++|++.+ .+|..+.++++|++|+|++ |++.+..|..|+++++|++|+|++|++.+..+..+..+..|+.+
T Consensus 51 ~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l 130 (313)
T d1ogqa_ 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred EEEEEECCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhccc
Confidence 56777777777665 3566777777777777765 56666666667777777777777777777667777777777777
Q ss_pred EcccCccCccCChhhhccccccccccccccccccCCccccCCCCC-CEEEccCccccccCCccccCCCCCCEEEeCCCCC
Q 005864 118 NFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSL-NYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKL 196 (673)
Q Consensus 118 ~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L-~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 196 (673)
++++|.+...+|..+.+++.|+.+++++|.+.+.+|..+..+.++ +.+++++|++++..+..+..+.. ..++++.+..
T Consensus 131 ~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~-~~l~l~~~~~ 209 (313)
T d1ogqa_ 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNL-AFVDLSRNML 209 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCC-SEEECCSSEE
T ss_pred ccccccccccCchhhccCcccceeecccccccccccccccccccccccccccccccccccccccccccc-cccccccccc
Confidence 777777777777777777888888888888777777777777665 77888888888777777766644 4688888888
Q ss_pred CCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCcccc
Q 005864 197 SGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCF 276 (673)
Q Consensus 197 ~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 276 (673)
.+.+|..+..+++|+.+++++|.+.+.++ .+..+++|+.|+|++|++++.+|..|+++++|++|+|++|+|+|.+|. +
T Consensus 210 ~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g~iP~-~ 287 (313)
T d1ogqa_ 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ-G 287 (313)
T ss_dssp EECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC-S
T ss_pred ccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccccCCC-c
Confidence 77788888888888888888888876543 577778888888888888888888888888899999999988887774 5
Q ss_pred ccCCCccEEEccCcc-ccCC
Q 005864 277 EGMHGLSCIDISYNE-LLGL 295 (673)
Q Consensus 277 ~~~~~L~~l~l~~N~-l~~~ 295 (673)
..+.+|+.+++++|+ ++|.
T Consensus 288 ~~L~~L~~l~l~~N~~l~g~ 307 (313)
T d1ogqa_ 288 GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp TTGGGSCGGGTCSSSEEEST
T ss_pred ccCCCCCHHHhCCCccccCC
Confidence 678888888899987 5554
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.95 E-value=7e-27 Score=234.71 Aligned_cols=267 Identities=21% Similarity=0.235 Sum_probs=195.4
Q ss_pred CCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEcc
Q 005864 17 NLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDIS 96 (673)
Q Consensus 17 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 96 (673)
..++++-++++++ .+|..+. +++++|+|++|+|+...+.+|.++++|++|++++|.+..+.+..|..+++|++|+++
T Consensus 11 ~~~~~~C~~~~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~ 87 (305)
T d1xkua_ 11 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87 (305)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred cCCEEEecCCCCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEeccc
Confidence 3566677777777 4455553 567778888877775555567777778888888777777777777777788888888
Q ss_pred CCccccccccCccccCCCcEEEcccCccCccCChhhhcccccccccccccccc--ccCCccccCCCCCCEEEccCccccc
Q 005864 97 HNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIV--GEIPIELGNLKSLNYLVLNGNKLSG 174 (673)
Q Consensus 97 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~--~~~~~~l~~l~~L~~L~L~~n~l~~ 174 (673)
+|+++.+.... ...+..|.+.+|.+....+..+.....+..+++..|... ...+..+..+++|+.+++++|.++
T Consensus 88 ~n~l~~l~~~~---~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~- 163 (305)
T d1xkua_ 88 KNQLKELPEKM---PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT- 163 (305)
T ss_dssp SSCCSBCCSSC---CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-
T ss_pred CCccCcCccch---hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcc-
Confidence 77777543322 346777777777777666666666667777777766443 334556777788888888888877
Q ss_pred cCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccC
Q 005864 175 NLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICN 254 (673)
Q Consensus 175 ~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 254 (673)
.++.. .+++|+.|++++|...+..+..|.+++.++.|++++|.+++..+..+..+++|++|+|++|+|+ .+|..|..
T Consensus 164 ~l~~~--~~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~ 240 (305)
T d1xkua_ 164 TIPQG--LPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 240 (305)
T ss_dssp SCCSS--CCTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred ccCcc--cCCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-cccccccc
Confidence 34433 2567888888888887777778888888888888888888877788888888888888888887 56778888
Q ss_pred CCcccEEEecCccccccCcccc------ccCCCccEEEccCcccc
Q 005864 255 LESLEKLNVSHNNLSGLIPSCF------EGMHGLSCIDISYNELL 293 (673)
Q Consensus 255 l~~L~~L~l~~N~l~~~~~~~~------~~~~~L~~l~l~~N~l~ 293 (673)
+++|++|+|++|+|+.+....| ..+++|+.|++++|++.
T Consensus 241 l~~L~~L~Ls~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~ 285 (305)
T d1xkua_ 241 HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 285 (305)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred ccCCCEEECCCCccCccChhhccCcchhcccCCCCEEECCCCcCc
Confidence 8888888888888887644443 45678888888888875
|
| >d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Decorin species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.95 E-value=1.3e-26 Score=232.66 Aligned_cols=274 Identities=23% Similarity=0.247 Sum_probs=227.8
Q ss_pred CccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccccc
Q 005864 3 HLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISE 82 (673)
Q Consensus 3 ~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~ 82 (673)
+++ ++|..+. +++++|+|++|+|+.+.+.+|.++++|++|++++|.+....|.+|.++++|++|++++|+|+.++..
T Consensus 21 ~L~-~lP~~l~--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~l~~~ 97 (305)
T d1xkua_ 21 GLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEK 97 (305)
T ss_dssp CCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCCSS
T ss_pred CCC-ccCCCCC--CCCCEEECcCCcCCCcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccCcCccc
Confidence 466 6788775 6899999999999977777899999999999999999988888999999999999999999977654
Q ss_pred ccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccC--ccCChhhhccccccccccccccccccCCccccCCC
Q 005864 83 VFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNIT--GSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLK 160 (673)
Q Consensus 83 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~--~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~ 160 (673)
. .+.+..|++.+|.+..+....+.....+..++...|... ...+..+..+++|+.+++++|.+. .++..+ ++
T Consensus 98 ~---~~~l~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~-~l~~~~--~~ 171 (305)
T d1xkua_ 98 M---PKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL--PP 171 (305)
T ss_dssp C---CTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSC--CT
T ss_pred h---hhhhhhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccccCCcc-ccCccc--CC
Confidence 3 467889999999998887777888888889998887644 344567888899999999999987 445443 57
Q ss_pred CCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeec
Q 005864 161 SLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLS 240 (673)
Q Consensus 161 ~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls 240 (673)
+|+.|++++|..+...+..|..++.++.|++++|.+++..+..+..+++|++|+|++|+|+. +|..|..+++|+.|+|+
T Consensus 172 ~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~-lp~~l~~l~~L~~L~Ls 250 (305)
T d1xkua_ 172 SLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK-VPGGLADHKYIQVVYLH 250 (305)
T ss_dssp TCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSS-CCTTTTTCSSCCEEECC
T ss_pred ccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeecccccccc-cccccccccCCCEEECC
Confidence 99999999999998888899999999999999999998888889999999999999999985 57789999999999999
Q ss_pred CCcCCCCCccc------ccCCCcccEEEecCcccc--ccCccccccCCCccEEE
Q 005864 241 HNFLGGEIPPQ------ICNLESLEKLNVSHNNLS--GLIPSCFEGMHGLSCID 286 (673)
Q Consensus 241 ~N~l~~~~~~~------~~~l~~L~~L~l~~N~l~--~~~~~~~~~~~~L~~l~ 286 (673)
+|+|+...... +..+.+|+.|+|++|+++ .+.|..|..+.....++
T Consensus 251 ~N~i~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~~~~~~~~f~~~~~~~~~~ 304 (305)
T d1xkua_ 251 NNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQ 304 (305)
T ss_dssp SSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEE
T ss_pred CCccCccChhhccCcchhcccCCCCEEECCCCcCccCcCCHhHhcccccCcccc
Confidence 99998543333 345788999999999875 46667776665554443
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.95 E-value=3.7e-26 Score=237.49 Aligned_cols=273 Identities=23% Similarity=0.306 Sum_probs=214.4
Q ss_pred CccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccccccc
Q 005864 3 HLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISE 82 (673)
Q Consensus 3 ~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~ 82 (673)
.+++.++ .+++.+|++|++++++|+.. ..+..+++|++|+|++|+|++.. .+.++++|++|++++|++.++.
T Consensus 33 ~~~~~~~--~~~l~~l~~L~l~~~~I~~l--~gl~~L~nL~~L~Ls~N~l~~l~--~l~~L~~L~~L~L~~n~i~~i~-- 104 (384)
T d2omza2 33 NVTDTVS--QTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADIT-- 104 (384)
T ss_dssp STTSEEC--HHHHTTCCEEECCSSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCCG--
T ss_pred CCCCccC--HHHhCCCCEEECCCCCCCCc--cccccCCCCCEEeCcCCcCCCCc--cccCCccccccccccccccccc--
Confidence 3555543 45677889999999988853 45788889999999999888543 3888899999999999888654
Q ss_pred ccCCCCCccEEEccCCccccccc---------------------------------------------------------
Q 005864 83 VFGIYPNLTFLDISHNNFYGEIW--------------------------------------------------------- 105 (673)
Q Consensus 83 ~~~~l~~L~~L~L~~n~i~~~~~--------------------------------------------------------- 105 (673)
.++.+++|+.|++++|.+++...
T Consensus 105 ~l~~l~~L~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (384)
T d2omza2 105 PLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISS 184 (384)
T ss_dssp GGTTCTTCCEEECCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccc
Confidence 37888889999888877653211
Q ss_pred ------cCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCcc
Q 005864 106 ------SSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRV 179 (673)
Q Consensus 106 ------~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~ 179 (673)
..+..+++++.+++++|.+++..+ +...++|++|++++|+++. ...+..+++|+.|++++|.+++.. .
T Consensus 185 ~~~~~~~~~~~l~~~~~l~l~~n~i~~~~~--~~~~~~L~~L~l~~n~l~~--~~~l~~l~~L~~L~l~~n~l~~~~--~ 258 (384)
T d2omza2 185 NKVSDISVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLA--P 258 (384)
T ss_dssp SCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCCG--G
T ss_pred cccccccccccccccceeeccCCccCCCCc--ccccCCCCEEECCCCCCCC--cchhhcccccchhccccCccCCCC--c
Confidence 224456788999999999886533 5667889999999999874 246778899999999999998543 3
Q ss_pred ccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCccc
Q 005864 180 LGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLE 259 (673)
Q Consensus 180 l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~ 259 (673)
+..+++|+.|++++|.+++.. .+..++.++.+.++.|.+++ ...+..+++++.|++++|++++.. .+..+++|+
T Consensus 259 ~~~~~~L~~L~l~~~~l~~~~--~~~~~~~l~~l~~~~n~l~~--~~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~ 332 (384)
T d2omza2 259 LSGLTKLTELKLGANQISNIS--PLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQ 332 (384)
T ss_dssp GTTCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCSC--CGGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCC
T ss_pred ccccccCCEeeccCcccCCCC--cccccccccccccccccccc--ccccchhcccCeEECCCCCCCCCc--ccccCCCCC
Confidence 788899999999999988543 47778888999999998875 345788889999999999998653 378889999
Q ss_pred EEEecCccccccCccccccCCCccEEEccCccccCCCC
Q 005864 260 KLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIP 297 (673)
Q Consensus 260 ~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~ 297 (673)
+|++++|+|++. + .+..+++|++|++++|++++.+|
T Consensus 333 ~L~L~~n~l~~l-~-~l~~l~~L~~L~l~~N~l~~l~~ 368 (384)
T d2omza2 333 RLFFANNKVSDV-S-SLANLTNINWLSAGHNQISDLTP 368 (384)
T ss_dssp EEECCSSCCCCC-G-GGGGCTTCCEEECCSSCCCBCGG
T ss_pred EEECCCCCCCCC-h-hHcCCCCCCEEECCCCcCCCChh
Confidence 999999998864 3 58889999999999999887765
|
| >d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin A species: Listeria monocytogenes [TaxId: 1639]
Probab=99.94 E-value=2.8e-26 Score=238.49 Aligned_cols=268 Identities=25% Similarity=0.344 Sum_probs=226.9
Q ss_pred CCccccCCCcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccc
Q 005864 2 NHLSGAIPPSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNIS 81 (673)
Q Consensus 2 n~i~~~~p~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~ 81 (673)
|.|+. + +.++.|++|++|+|++|+|++.. .|+++++|++|++++|.+.+.. .+..+++|+.|++++|.+++...
T Consensus 54 ~~I~~-l-~gl~~L~nL~~L~Ls~N~l~~l~--~l~~L~~L~~L~L~~n~i~~i~--~l~~l~~L~~L~~~~~~~~~~~~ 127 (384)
T d2omza2 54 LGIKS-I-DGVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADIT--PLANLTNLTGLTLFNNQITDIDP 127 (384)
T ss_dssp SCCCC-C-TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSCCCCCGG
T ss_pred CCCCC-c-cccccCCCCCEEeCcCCcCCCCc--cccCCccccccccccccccccc--ccccccccccccccccccccccc
Confidence 45664 3 57889999999999999999653 3999999999999999998543 48999999999999888764311
Q ss_pred ---------------------------------------------------------------cccCCCCCccEEEccCC
Q 005864 82 ---------------------------------------------------------------EVFGIYPNLTFLDISHN 98 (673)
Q Consensus 82 ---------------------------------------------------------------~~~~~l~~L~~L~L~~n 98 (673)
..+..+++++.|++++|
T Consensus 128 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~l~~n 207 (384)
T d2omza2 128 LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNN 207 (384)
T ss_dssp GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSS
T ss_pred ccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccceeeccCC
Confidence 23456788999999999
Q ss_pred ccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCc
Q 005864 99 NFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPR 178 (673)
Q Consensus 99 ~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~ 178 (673)
.+++..+ +..+++|++|++++|.++.. +.+..+++|+.|++++|.+++.. .+..+++|+.|++++|++++..
T Consensus 208 ~i~~~~~--~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~--~~~~~~~L~~L~l~~~~l~~~~-- 279 (384)
T d2omza2 208 QISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLA--PLSGLTKLTELKLGANQISNIS-- 279 (384)
T ss_dssp CCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG--GGTTCTTCSEEECCSSCCCCCG--
T ss_pred ccCCCCc--ccccCCCCEEECCCCCCCCc--chhhcccccchhccccCccCCCC--cccccccCCEeeccCcccCCCC--
Confidence 9986543 56778999999999999853 57889999999999999998543 4788899999999999998543
Q ss_pred cccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcc
Q 005864 179 VLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESL 258 (673)
Q Consensus 179 ~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L 258 (673)
.+..++.++.+.++.|.+++ ...+..+++++.|++++|++++.. .+..+++|+.|++++|++++ ++ .+.++++|
T Consensus 280 ~~~~~~~l~~l~~~~n~l~~--~~~~~~~~~l~~L~ls~n~l~~l~--~l~~l~~L~~L~L~~n~l~~-l~-~l~~l~~L 353 (384)
T d2omza2 280 PLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDIS--PVSSLTKLQRLFFANNKVSD-VS-SLANLTNI 353 (384)
T ss_dssp GGTTCTTCSEEECCSSCCSC--CGGGGGCTTCSEEECCSSCCSCCG--GGGGCTTCCEEECCSSCCCC-CG-GGGGCTTC
T ss_pred cccccccccccccccccccc--ccccchhcccCeEECCCCCCCCCc--ccccCCCCCEEECCCCCCCC-Ch-hHcCCCCC
Confidence 47889999999999999985 345888999999999999999753 48899999999999999984 44 68999999
Q ss_pred cEEEecCccccccCccccccCCCccEEEccCcc
Q 005864 259 EKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNE 291 (673)
Q Consensus 259 ~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~ 291 (673)
++|++++|++++..| +.++++|+.|++++|.
T Consensus 354 ~~L~l~~N~l~~l~~--l~~l~~L~~L~L~~Na 384 (384)
T d2omza2 354 NWLSAGHNQISDLTP--LANLTRITQLGLNDQA 384 (384)
T ss_dssp CEEECCSSCCCBCGG--GTTCTTCSEEECCCEE
T ss_pred CEEECCCCcCCCChh--hccCCCCCEeeCCCCc
Confidence 999999999998865 8899999999999983
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.1e-26 Score=230.49 Aligned_cols=255 Identities=20% Similarity=0.162 Sum_probs=184.1
Q ss_pred CEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEcc-C
Q 005864 19 KGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDIS-H 97 (673)
Q Consensus 19 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~-~ 97 (673)
..++.++++++ .+|..+. +++++|+|++|+|+...+.+|.++++|++|++++|++..+....+..++.+..+... .
T Consensus 14 ~~v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~ 90 (284)
T d1ozna_ 14 VTTSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (284)
T ss_dssp CEEECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccc
Confidence 35567777777 4565554 467888888888876666778888888888888888888877788888888887764 4
Q ss_pred CccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCC
Q 005864 98 NNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLP 177 (673)
Q Consensus 98 n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 177 (673)
|.++.+.+..|+++++|++|++++|.+....+..+...++|+.+++++|+++...+..|..+++|+.|++++|+++...+
T Consensus 91 ~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~ 170 (284)
T d1ozna_ 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (284)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred cccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccch
Confidence 66776777778888888888888888776666677777778888888888776666677777778888888888777777
Q ss_pred ccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCc
Q 005864 178 RVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLES 257 (673)
Q Consensus 178 ~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~ 257 (673)
.+|..+++|+.+++++|.+++..|..|..+++|+.|++++|++.+..+..|..+++|+.|++++|++...-+. ..-...
T Consensus 171 ~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~C~C~~-~~l~~~ 249 (284)
T d1ozna_ 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA-RPLWAW 249 (284)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG-HHHHHH
T ss_pred hhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccCEEEecCCCCCCCccc-hHHHHH
Confidence 7777778888888888887777777777777888888888888777777777777788888888777643221 111123
Q ss_pred ccEEEecCccccccCccccc
Q 005864 258 LEKLNVSHNNLSGLIPSCFE 277 (673)
Q Consensus 258 L~~L~l~~N~l~~~~~~~~~ 277 (673)
++.+....+++....|..+.
T Consensus 250 l~~~~~~~~~~~C~~p~~l~ 269 (284)
T d1ozna_ 250 LQKFRGSSSEVPCSLPQRLA 269 (284)
T ss_dssp HHHCCSEECCCBEEESGGGT
T ss_pred HHhCcCCCCceEeCCchHHc
Confidence 44455555555555555444
|
| >d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Reticulon 4 receptor (Nogo-66 receptor, Ngr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=3e-26 Score=227.31 Aligned_cols=228 Identities=22% Similarity=0.224 Sum_probs=131.4
Q ss_pred EEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCc
Q 005864 44 NLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNN 123 (673)
Q Consensus 44 ~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 123 (673)
.++.++++++ .+|..+. +++++|+|++|+|+.+++..|.++++|++|++++|++..+....+..+..+..+...
T Consensus 15 ~v~c~~~~L~-~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~--- 88 (284)
T d1ozna_ 15 TTSCPQQGLQ-AVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLS--- 88 (284)
T ss_dssp EEECCSSCCS-SCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC---
T ss_pred EEEcCCCCCC-ccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccc---
Confidence 3445555554 3343322 345555555555555555555555555555555555555444444444444444432
Q ss_pred cCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCcc
Q 005864 124 ITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPET 203 (673)
Q Consensus 124 l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~ 203 (673)
..|.++...+..+..+++|++|++++|.+....+..+...++|+.+++++|.+++..+..
T Consensus 89 --------------------~~~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~ 148 (284)
T d1ozna_ 89 --------------------DNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDT 148 (284)
T ss_dssp --------------------SCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred --------------------cccccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhH
Confidence 233333333445555555666666666555444445555566666666666666444555
Q ss_pred ccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCcc
Q 005864 204 LGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLS 283 (673)
Q Consensus 204 l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~ 283 (673)
|..+++|+.|++++|++++..+..|.++++|+.+++++|.+++..|..|..+++|++|++++|++.+..+..|..+++|+
T Consensus 149 f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~~~~~~~L~ 228 (284)
T d1ozna_ 149 FRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQ 228 (284)
T ss_dssp TTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCC
T ss_pred hccccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhcccccccccccccccccccccccccC
Confidence 66666666666666666665566666666666666666666666666666666666666666666666666666666777
Q ss_pred EEEccCccccCCCC
Q 005864 284 CIDISYNELLGLIP 297 (673)
Q Consensus 284 ~l~l~~N~l~~~~~ 297 (673)
.|++++|++.+..+
T Consensus 229 ~L~l~~N~l~C~C~ 242 (284)
T d1ozna_ 229 YLRLNDNPWVCDCR 242 (284)
T ss_dssp EEECCSSCEECSGG
T ss_pred EEEecCCCCCCCcc
Confidence 77777777666554
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=2.2e-23 Score=204.12 Aligned_cols=201 Identities=26% Similarity=0.269 Sum_probs=111.3
Q ss_pred CCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEE
Q 005864 14 NFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFL 93 (673)
Q Consensus 14 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 93 (673)
+..++.+++.++++++ .+|..+. ++|++|+|++|+|+...+.+|.++++|++|+|++|+|+.+. .++.++
T Consensus 8 ~~~~~~~v~C~~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~--~~~~l~----- 77 (266)
T d1p9ag_ 8 KVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQ--VDGTLP----- 77 (266)
T ss_dssp CSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEE--CCSCCT-----
T ss_pred ccCCCeEEEccCCCCC-eeCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccccccccc--cccccc-----
Confidence 3444455555555555 3343332 34555555555555444444555555555555555554332 233444
Q ss_pred EccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCcccc
Q 005864 94 DISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLS 173 (673)
Q Consensus 94 ~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~ 173 (673)
+|++|+|++|+++ ..+..+..+++|+.|++++|.+....+..+..+.+++.|++++|.++
T Consensus 78 -------------------~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~ 137 (266)
T d1p9ag_ 78 -------------------VLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELK 137 (266)
T ss_dssp -------------------TCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCC
T ss_pred -------------------ccccccccccccc-ccccccccccccccccccccccceeeccccccccccccccccccccc
Confidence 4455555555444 23334455555555555555555444555555566666666666666
Q ss_pred ccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCC
Q 005864 174 GNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLG 245 (673)
Q Consensus 174 ~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~ 245 (673)
...+..+..+++|+.|++++|++++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|++.
T Consensus 138 ~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~ 208 (266)
T d1p9ag_ 138 TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (266)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred eeccccccccccchhcccccccccccCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCC
Confidence 555555566666666666666666555556666666666666666666 35555556666777777776654
|
| >d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: von Willebrand factor binding domain of glycoprotein Ib alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=2.3e-23 Score=203.87 Aligned_cols=201 Identities=27% Similarity=0.229 Sum_probs=163.3
Q ss_pred CCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccc
Q 005864 63 LASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLD 142 (673)
Q Consensus 63 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 142 (673)
...+.+++++++.++.++... .++|++|+|++|+|+++.+..|.++++|++|+|++|+|+.+ + .++.+++|++|+
T Consensus 9 ~~~~~~v~C~~~~L~~iP~~l---p~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~ 83 (266)
T d1p9ag_ 9 VASHLEVNCDKRNLTALPPDL---PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-Q-VDGTLPVLGTLD 83 (266)
T ss_dssp STTCCEEECTTSCCSSCCSCC---CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-E-CCSCCTTCCEEE
T ss_pred cCCCeEEEccCCCCCeeCcCc---CcCCCEEECcCCcCCCcCHHHhhcccccccccccccccccc-c-cccccccccccc
Confidence 344455555555555443321 13566666666666666666666666677777777766633 2 346789999999
Q ss_pred cccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCcc
Q 005864 143 FSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRK 222 (673)
Q Consensus 143 l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~ 222 (673)
|++|+++ ..+..+..+++|+.|++++|.+....+..+..+.+++.|++++|.+....+..+..+++|+.|++++|++++
T Consensus 84 Ls~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~ 162 (266)
T d1p9ag_ 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (266)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred ccccccc-ccccccccccccccccccccccceeeccccccccccccccccccccceeccccccccccchhcccccccccc
Confidence 9999998 557788999999999999999998888888999999999999999997777888899999999999999999
Q ss_pred CCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccc
Q 005864 223 EFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSG 270 (673)
Q Consensus 223 ~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 270 (673)
..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|++..
T Consensus 163 ~~~~~~~~l~~L~~L~Ls~N~L~-~lp~~~~~~~~L~~L~L~~Np~~C 209 (266)
T d1p9ag_ 163 LPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (266)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred cCccccccccccceeecccCCCc-ccChhHCCCCCCCEEEecCCCCCC
Confidence 88889999999999999999999 889889999999999999998763
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.89 E-value=8.1e-24 Score=195.90 Aligned_cols=172 Identities=18% Similarity=0.154 Sum_probs=122.8
Q ss_pred CccceeccCCcEEEEEEEeCCCCEEEEEeeccchhh---------------hhHHHHHHHHHHHHHhccCCCcccceeee
Q 005864 405 DAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLS---------------EISVQREFLNEIKALTEIRHRNIVKFYGF 469 (673)
Q Consensus 405 ~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~---------------~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 469 (673)
.+.+.||+|+||+||+|...+|+.||||+++..... ..........|...+.+++|++++..+++
T Consensus 3 ~vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~ 82 (191)
T d1zara2 3 AIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW 82 (191)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred hhCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence 457899999999999999889999999987532111 01123445678999999999999988866
Q ss_pred eecCCeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCCCCeEEecCCCCCeEeCCCCceEEe
Q 005864 470 CSHPRHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCFPPIVHRDISSKNVLLSSEYEARVS 549 (673)
Q Consensus 470 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 549 (673)
.. .+++|||++++.+.+ ++......++.|+++|++|||++ +|+||||||+||+++++ .++++
T Consensus 83 ~~----~~lvme~~~~~~~~~----------l~~~~~~~i~~ql~~~l~~lH~~---giiHrDiKP~NILv~~~-~~~li 144 (191)
T d1zara2 83 EG----NAVLMELIDAKELYR----------VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEE-GIWII 144 (191)
T ss_dssp ET----TEEEEECCCCEEGGG----------CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEETT-EEEEC
T ss_pred cC----CEEEEEeeccccccc----------hhhHHHHHHHHHHHHHHHHHhhC---CEEEccCChhheeeeCC-CEEEE
Confidence 42 379999999865543 23344567999999999999999 99999999999999965 58999
Q ss_pred cccceeecCCCCCCceecccccccccccccccCCcCcchhHHHHHHHH
Q 005864 550 DFGIAKFLKPGSSNWTEFAGTFGYVAPELAYTMKVTEKCDVYSFGVLA 597 (673)
Q Consensus 550 Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 597 (673)
|||.|.....+.... ........+ .| ...+.|+.++|+||..--+
T Consensus 145 DFG~a~~~~~~~~~~-~l~rd~~~~-~~-~f~r~y~~~~d~~s~~~~~ 189 (191)
T d1zara2 145 DFPQSVEVGEEGWRE-ILERDVRNI-IT-YFSRTYRTEKDINSAIDRI 189 (191)
T ss_dssp CCTTCEETTSTTHHH-HHHHHHHHH-HH-HHHHHHCCCCCHHHHHHHH
T ss_pred ECCCcccCCCCCcHH-HHHHHHHHH-HH-HHcCCCCCcccHHHHHHHH
Confidence 999998664322110 000000000 11 1245688899999976443
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.80 E-value=2.5e-19 Score=170.53 Aligned_cols=77 Identities=21% Similarity=0.392 Sum_probs=33.3
Q ss_pred ccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccEE
Q 005864 206 NLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCI 285 (673)
Q Consensus 206 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l 285 (673)
.+++|+.|++++|.+++. ..+..+++|+.|++++|++++. + .+.++++|++|+|++|+++++.| +..+++|+.|
T Consensus 149 ~~~~L~~L~l~~n~~~~~--~~l~~l~~L~~L~Ls~n~l~~l-~-~l~~l~~L~~L~Ls~N~lt~i~~--l~~l~~L~~L 222 (227)
T d1h6ua2 149 GLTNLQYLSIGNAQVSDL--TPLANLSKLTTLKADDNKISDI-S-PLASLPNLIEVHLKNNQISDVSP--LANTSNLFIV 222 (227)
T ss_dssp GCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEE
T ss_pred cccccccccccccccccc--hhhcccccceecccCCCccCCC-h-hhcCCCCCCEEECcCCcCCCCcc--cccCCCCCEE
Confidence 333444444444444321 1234444444444444444421 1 24444455555555555444322 4445555555
Q ss_pred Ecc
Q 005864 286 DIS 288 (673)
Q Consensus 286 ~l~ 288 (673)
+++
T Consensus 223 ~ls 225 (227)
T d1h6ua2 223 TLT 225 (227)
T ss_dssp EEE
T ss_pred Eee
Confidence 544
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=1.9e-19 Score=173.43 Aligned_cols=218 Identities=16% Similarity=0.062 Sum_probs=113.0
Q ss_pred CEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCccccc-ccccccCCCCCccEEEccC
Q 005864 19 KGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTG-NISEVFGIYPNLTFLDISH 97 (673)
Q Consensus 19 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~ 97 (673)
+.++.++++++ .+|..+. +++++|+|++|+|+...+.+|.++++|++|+|++|.+.. +.+..|..++++++|.+..
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 46666666666 4454442 467777777777765555566777777777777776653 3455666677777766553
Q ss_pred -CccccccccCccccCCCcEEEcccCccCccCCh-hhhccccccccccccccccccCCccccCCCCCCEEEccCcccccc
Q 005864 98 -NNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPP-EIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175 (673)
Q Consensus 98 -n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~ 175 (673)
|.+....+..|.++++|+.|++++|++....+. .+..+..+..+...++.+....+..+..++
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~--------------- 152 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLS--------------- 152 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSB---------------
T ss_pred cccccccccccccccccccccccchhhhccccccccccccccccccccccccccccccccccccc---------------
Confidence 556556666666666677777766666533221 122333333334444444433333333332
Q ss_pred CCccccCCCCCCEEEeCCCCCCCcCCccccccccccEE-EccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccC
Q 005864 176 LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYL-NLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICN 254 (673)
Q Consensus 176 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L-~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 254 (673)
..++.|++++|.++...+. ..+.+++..+ ++++|+++.+.+..|.++++|+.|++++|+++...+..|.+
T Consensus 153 --------~~l~~L~l~~n~l~~i~~~-~~~~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~ 223 (242)
T d1xwdc1 153 --------FESVILWLNKNGIQEIHNC-AFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN 223 (242)
T ss_dssp --------SSCEEEECCSSCCCEECTT-TTTTCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTT
T ss_pred --------ccceeeecccccccccccc-cccchhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcC
Confidence 1344444444444422222 2222333222 34444555444444555555555555555555333334444
Q ss_pred CCcccEEEe
Q 005864 255 LESLEKLNV 263 (673)
Q Consensus 255 l~~L~~L~l 263 (673)
+++|+.+++
T Consensus 224 l~~L~~l~~ 232 (242)
T d1xwdc1 224 LKKLRARST 232 (242)
T ss_dssp CCEEESSSE
T ss_pred CcccccCcC
Confidence 444444443
|
| >d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin H species: Listeria monocytogenes [TaxId: 1639]
Probab=99.80 E-value=3.1e-19 Score=169.88 Aligned_cols=208 Identities=25% Similarity=0.288 Sum_probs=158.8
Q ss_pred CCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEc
Q 005864 16 TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDI 95 (673)
Q Consensus 16 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 95 (673)
.++..++++.+.+++.. .++.+.+|+.|++++|+|+.. ..+..+++|++|++++|+++++.+ +..+++|++|++
T Consensus 19 ~~~~~~~l~~~~~~d~~--~~~~l~~L~~L~l~~~~i~~l--~~l~~l~~L~~L~ls~n~i~~~~~--l~~l~~l~~l~~ 92 (227)
T d1h6ua2 19 ANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELEL 92 (227)
T ss_dssp HHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEEC
T ss_pred HHHHHHHhCCCCcCCcC--CHHHcCCcCEEECCCCCCCcc--hhHhcCCCCcEeecCCceeecccc--cccccccccccc
Confidence 34455667777777433 456778888888888888743 357888888888888888886543 788888888888
Q ss_pred cCCccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCcccccc
Q 005864 96 SHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGN 175 (673)
Q Consensus 96 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~ 175 (673)
++|.++.+ ..++++++|+.+.++++...+. ..+...+.++.+.++++.+... ..+..+++|+.|++++|.+++.
T Consensus 93 ~~n~~~~i--~~l~~l~~L~~l~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~~ 166 (227)
T d1h6ua2 93 SGNPLKNV--SAIAGLQSIKTLDLTSTQITDV--TPLAGLSNLQVLYLDLNQITNI--SPLAGLTNLQYLSIGNAQVSDL 166 (227)
T ss_dssp CSCCCSCC--GGGTTCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCCEEECCSSCCCCC
T ss_pred cccccccc--cccccccccccccccccccccc--chhccccchhhhhchhhhhchh--hhhccccccccccccccccccc
Confidence 88888643 4577888888888888877643 4466677888888888877532 3466778899999999988743
Q ss_pred CCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecC
Q 005864 176 LPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241 (673)
Q Consensus 176 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~ 241 (673)
..+..+++|+.|++++|++++ ++ .+.++++|++|+|++|++++.. .+..+++|+.|++++
T Consensus 167 --~~l~~l~~L~~L~Ls~n~l~~-l~-~l~~l~~L~~L~Ls~N~lt~i~--~l~~l~~L~~L~lsn 226 (227)
T d1h6ua2 167 --TPLANLSKLTTLKADDNKISD-IS-PLASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTN 226 (227)
T ss_dssp --GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEE
T ss_pred --hhhcccccceecccCCCccCC-Ch-hhcCCCCCCEEECcCCcCCCCc--ccccCCCCCEEEeeC
Confidence 347888999999999999885 33 4788899999999999998654 378889999999874
|
| >d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Follicle-stimulating hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=3.1e-19 Score=171.87 Aligned_cols=220 Identities=15% Similarity=0.136 Sum_probs=136.4
Q ss_pred CEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCcccc-ccccCccccCCCcEEEccc
Q 005864 43 TNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYG-EIWSSWGKCQQLGTLNFSM 121 (673)
Q Consensus 43 ~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~ 121 (673)
+.++.++++++ .+|..+. +++++|+|++|+|+.++...|.++++|++|+|++|.+.. +.+..|.+++.+++|.+..
T Consensus 11 ~~i~c~~~~l~-~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~ 87 (242)
T d1xwdc1 11 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 87 (242)
T ss_dssp SEEEEESCSCS-SCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEEC
T ss_pred CEEEEeCCCCC-CcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccc
Confidence 45555555555 3443332 345555555555555555555555555555555555433 2233444444444444432
Q ss_pred CccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCc-cccCCCCCCEEEeCCCCCCCcC
Q 005864 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPR-VLGSLSELEYLDLSTNKLSGSI 200 (673)
Q Consensus 122 n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~-~l~~l~~L~~L~l~~n~l~~~~ 200 (673)
.|.+....+..|..+++|++|++++|.+....+. .+..+..+..+..+++.+....
T Consensus 88 -----------------------~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~ 144 (242)
T d1xwdc1 88 -----------------------ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIE 144 (242)
T ss_dssp -----------------------CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEEC
T ss_pred -----------------------cccccccccccccccccccccccchhhhccccccccccccccccccccccccccccc
Confidence 2344444445555666666666666666532221 2334455555666777776555
Q ss_pred Cccccccc-cccEEEccCCcCccCCchhhhcccCCCeE-eecCCcCCCCCcccccCCCcccEEEecCccccccCcccccc
Q 005864 201 PETLGNLL-KVHYLNLSNNQFRKEFPVELEKLVQLSEL-DLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEG 278 (673)
Q Consensus 201 ~~~l~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L-~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 278 (673)
+..|..++ .++.|++++|+++...+..+.. .+++.+ ++++|.++...+..|.++++|++|+|++|+|+.+.+..|.+
T Consensus 145 ~~~~~~~~~~l~~L~l~~n~l~~i~~~~~~~-~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~ 223 (242)
T d1xwdc1 145 RNSFVGLSFESVILWLNKNGIQEIHNCAFNG-TQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN 223 (242)
T ss_dssp TTSSTTSBSSCEEEECCSSCCCEECTTTTTT-CCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCCSSSCTT
T ss_pred ccccccccccceeeecccccccccccccccc-hhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccCHHHHcC
Confidence 56666654 7889999999999766655544 455444 67888898555567899999999999999999887888888
Q ss_pred CCCccEEEccC
Q 005864 279 MHGLSCIDISY 289 (673)
Q Consensus 279 ~~~L~~l~l~~ 289 (673)
++.|+.+++.+
T Consensus 224 l~~L~~l~~~~ 234 (242)
T d1xwdc1 224 LKKLRARSTYN 234 (242)
T ss_dssp CCEEESSSEES
T ss_pred CcccccCcCCC
Confidence 88888777654
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.77 E-value=2.7e-17 Score=167.53 Aligned_cols=250 Identities=26% Similarity=0.300 Sum_probs=129.9
Q ss_pred CCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEcc
Q 005864 17 NLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDIS 96 (673)
Q Consensus 17 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 96 (673)
++++|+|++|.++ .+|+. .++|++|+|++|+|+ .+|.. +.+|+.|++++|+++.+.. -.+.|++|+++
T Consensus 39 ~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~---~~~L~~L~l~~n~l~~l~~----lp~~L~~L~L~ 106 (353)
T d1jl5a_ 39 QAHELELNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPEL---PQSLKSLLVDNNNLKALSD----LPPLLEYLGVS 106 (353)
T ss_dssp TCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSCCCS----CCTTCCEEECC
T ss_pred CCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccc---hhhhhhhhhhhcccchhhh----hcccccccccc
Confidence 4566666666666 34432 345666666666665 34433 3456666666666654321 12346666666
Q ss_pred CCccccccccCccccCCCcEEEcccCccCccC------------------Chhhhcccccccccccccccccc-------
Q 005864 97 HNNFYGEIWSSWGKCQQLGTLNFSMNNITGSI------------------PPEIGKLYQLHKLDFSLNQIVGE------- 151 (673)
Q Consensus 97 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~------------------~~~l~~l~~L~~L~l~~n~i~~~------- 151 (673)
+|.+..+. .++.+++|+.|++++|.+.... ...+..++.++.|++++|.....
T Consensus 107 ~n~l~~lp--~~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~~~~~~~~~~ 184 (353)
T d1jl5a_ 107 NNQLEKLP--ELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSL 184 (353)
T ss_dssp SSCCSSCC--CCTTCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSSCCCCCTTC
T ss_pred cccccccc--chhhhccceeeccccccccccccccccccchhhccccccccccccccccceecccccccccccccccccc
Confidence 66665432 2455666666666666554221 12233344455555555443311
Q ss_pred -----------CCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcC
Q 005864 152 -----------IPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQF 220 (673)
Q Consensus 152 -----------~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 220 (673)
....+..++.|+.+++++|... ..+. ...++..+.+..+.+.. .+.. ...+..+++..+.+
T Consensus 185 ~~l~~~~~~~~~~~~~~~l~~L~~l~l~~n~~~-~~~~---~~~~l~~~~~~~~~~~~-~~~~---~~~l~~~~~~~~~~ 256 (353)
T d1jl5a_ 185 ESIVAGNNILEELPELQNLPFLTTIYADNNLLK-TLPD---LPPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIF 256 (353)
T ss_dssp CEEECCSSCCSSCCCCTTCTTCCEEECCSSCCS-SCCS---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCC
T ss_pred ccccccccccccccccccccccccccccccccc-cccc---ccccccccccccccccc-cccc---cccccccccccccc
Confidence 0111233445555555555444 1221 22334444444444431 1111 11222333332222
Q ss_pred ccC----------------CchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCccccccCCCccE
Q 005864 221 RKE----------------FPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSC 284 (673)
Q Consensus 221 ~~~----------------~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~ 284 (673)
.+. .......+++|++|+|++|+++ .+|. .+++|+.|+|++|+|+.+ |. .+++|++
T Consensus 257 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~---~~~~L~~L~L~~N~L~~l-~~---~~~~L~~ 328 (353)
T d1jl5a_ 257 SGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLI-ELPA---LPPRLERLIASFNHLAEV-PE---LPQNLKQ 328 (353)
T ss_dssp SEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSCC-CC---CCTTCCE
T ss_pred cccccccchhcccccccCccccccccCCCCCEEECCCCccC-cccc---ccCCCCEEECCCCcCCcc-cc---ccCCCCE
Confidence 110 0011123468999999999988 5664 367889999999998854 43 2467899
Q ss_pred EEccCccccCCC
Q 005864 285 IDISYNELLGLI 296 (673)
Q Consensus 285 l~l~~N~l~~~~ 296 (673)
|++++|+++..+
T Consensus 329 L~L~~N~L~~lp 340 (353)
T d1jl5a_ 329 LHVEYNPLREFP 340 (353)
T ss_dssp EECCSSCCSSCC
T ss_pred EECcCCcCCCCC
Confidence 999999987543
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.76 E-value=1.8e-18 Score=161.94 Aligned_cols=182 Identities=24% Similarity=0.290 Sum_probs=127.4
Q ss_pred EEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCc
Q 005864 20 GLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNN 99 (673)
Q Consensus 20 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 99 (673)
...++.+.+++..+. ..+.+|+.|++++|.++... .+..+++|++|+|++|+|+++. .++.+++|++|++++|+
T Consensus 28 ~~~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~l~--~l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~~n~ 101 (210)
T d1h6ta2 28 KDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLDENK 101 (210)
T ss_dssp HHHTTCSCTTSEECH--HHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSC
T ss_pred HHHhCcCccCCccCH--HHhcCccEEECcCCCCCCch--hHhhCCCCCEEeCCCccccCcc--ccccCcccccccccccc
Confidence 334555666544332 34567777888887776432 3677778888888888777654 35677788888888887
Q ss_pred cccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCcc
Q 005864 100 FYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRV 179 (673)
Q Consensus 100 i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~ 179 (673)
++++. .+..+++|+.|++++|.+.. ...+..++.|+.+++++|.+++ +..+..+++|+.+++++|++++. + .
T Consensus 102 i~~l~--~l~~l~~L~~L~l~~~~~~~--~~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i-~-~ 173 (210)
T d1h6ta2 102 VKDLS--SLKDLKKLKSLSLEHNGISD--INGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDI-V-P 173 (210)
T ss_dssp CCCGG--GGTTCTTCCEEECTTSCCCC--CGGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCC-G-G
T ss_pred ccccc--cccccccccccccccccccc--cccccccccccccccccccccc--ccccccccccccccccccccccc-c-c
Confidence 76532 46777788888888877763 2457777788888888887763 33466778888888888888743 2 3
Q ss_pred ccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccC
Q 005864 180 LGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSN 217 (673)
Q Consensus 180 l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~ 217 (673)
+.++++|+.|++++|.+++ ++ .+..+++|+.|+|++
T Consensus 174 l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 174 LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFS 209 (210)
T ss_dssp GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEE
T ss_pred ccCCCCCCEEECCCCCCCC-Ch-hhcCCCCCCEEEccC
Confidence 7788888888888888873 44 578888888888764
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.76 E-value=1.6e-18 Score=159.97 Aligned_cols=127 Identities=23% Similarity=0.278 Sum_probs=59.4
Q ss_pred EEEeeCCccccCCCccccCCCCCCEEEcccCcccc-ccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCC
Q 005864 20 GLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFG-QIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHN 98 (673)
Q Consensus 20 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~-~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 98 (673)
+++.++++++ .+|..+. +++++|+|++|+|+. ..+..|.++++|+.|+|++|++..+.+..|..+++|++|+|++|
T Consensus 12 ~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N 88 (192)
T d1w8aa_ 12 TVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc
Confidence 4444444444 2333332 344445555544432 22334444444555555444444444444444444555555555
Q ss_pred ccccccccCccccCCCcEEEcccCccCccCChhhhcccccccccccccccc
Q 005864 99 NFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIV 149 (673)
Q Consensus 99 ~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~ 149 (673)
+|+.+.+..|.++++|++|+|++|+|+.+.+.+|..+++|++|+|++|.+.
T Consensus 89 ~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~ 139 (192)
T d1w8aa_ 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred cccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccc
Confidence 444444444444445555555555544444444444444555555444443
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.76 E-value=3.1e-18 Score=158.92 Aligned_cols=180 Identities=26% Similarity=0.322 Sum_probs=122.8
Q ss_pred CCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccC
Q 005864 18 LKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISH 97 (673)
Q Consensus 18 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 97 (673)
+..+.++.+.+++... ...+.+|++|++++|.|... +.++.+++|++|+|++|+++++.+ +..+++|++|++++
T Consensus 20 ~i~~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~~l--~~l~~l~nL~~L~Ls~N~l~~~~~--l~~l~~L~~L~l~~ 93 (199)
T d2omxa2 20 KMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNN 93 (199)
T ss_dssp HHHHHTTCSSTTSEEC--HHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhCCCCCCCccC--HHHhcCCCEEECCCCCCCCc--cccccCCCcCcCccccccccCccc--ccCCcccccccccc
Confidence 3344556666664332 34566777777777777632 346677777777777777776543 67777777777777
Q ss_pred CccccccccCccccCCCcEEEcccCccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCC
Q 005864 98 NNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLP 177 (673)
Q Consensus 98 n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 177 (673)
|.+.... .++++++|+.|++++|.+... ..+..+++|+.|++++|++.. + ..+..+++|+.|++.+|++++.
T Consensus 94 n~~~~~~--~l~~l~~L~~L~l~~~~~~~~--~~~~~l~~L~~L~l~~n~l~~-~-~~l~~~~~L~~L~l~~n~l~~l-- 165 (199)
T d2omxa2 94 NQIADIT--PLANLTNLTGLTLFNNQITDI--DPLKNLTNLNRLELSSNTISD-I-SALSGLTSLQQLNFSSNQVTDL-- 165 (199)
T ss_dssp SCCCCCG--GGTTCTTCSEEECCSSCCCCC--GGGTTCTTCSEEECCSSCCCC-C-GGGTTCTTCSEEECCSSCCCCC--
T ss_pred ccccccc--ccccccccccccccccccccc--cccchhhhhHHhhhhhhhhcc-c-ccccccccccccccccccccCC--
Confidence 7775432 466777777777777777642 346677788888888887752 2 3567778888888888888743
Q ss_pred ccccCCCCCCEEEeCCCCCCCcCCccccccccccEE
Q 005864 178 RVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYL 213 (673)
Q Consensus 178 ~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 213 (673)
..+.++++|+.|++++|++++ ++ .+..+++|++|
T Consensus 166 ~~l~~l~~L~~L~ls~N~i~~-i~-~l~~L~~L~~L 199 (199)
T d2omxa2 166 KPLANLTTLERLDISSNKVSD-IS-VLAKLTNLESL 199 (199)
T ss_dssp GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEE
T ss_pred ccccCCCCCCEEECCCCCCCC-Cc-cccCCCCCCcC
Confidence 247788888888888888874 33 47777777765
|
| >d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.75 E-value=3.9e-18 Score=159.69 Aligned_cols=182 Identities=24% Similarity=0.302 Sum_probs=131.3
Q ss_pred EEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCc
Q 005864 44 NLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNN 123 (673)
Q Consensus 44 ~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 123 (673)
..++..+.+++.++. ..+.+|+.|++++|.++.+. .+..+++|++|+|++|+++++. .++.+++|+.|++++|+
T Consensus 28 ~~~l~~~~~~~~~~~--~~L~~L~~L~l~~~~i~~l~--~l~~l~~L~~L~L~~n~i~~l~--~~~~l~~L~~L~l~~n~ 101 (210)
T d1h6ta2 28 KDNLKKKSVTDAVTQ--NELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIK--PLANLKNLGWLFLDENK 101 (210)
T ss_dssp HHHTTCSCTTSEECH--HHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCSSC
T ss_pred HHHhCcCccCCccCH--HHhcCccEEECcCCCCCCch--hHhhCCCCCEEeCCCccccCcc--ccccCcccccccccccc
Confidence 345566666544432 35677888888888887654 3677888888888888887543 35678888888888888
Q ss_pred cCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCcc
Q 005864 124 ITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPET 203 (673)
Q Consensus 124 l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~ 203 (673)
++.. + .+..+++|+.|++++|.+.. ...+..+++++.+++++|.+++ +..+..+++|+.+++++|.+++. + .
T Consensus 102 i~~l-~-~l~~l~~L~~L~l~~~~~~~--~~~l~~l~~l~~l~~~~n~l~~--~~~~~~l~~L~~l~l~~n~l~~i-~-~ 173 (210)
T d1h6ta2 102 VKDL-S-SLKDLKKLKSLSLEHNGISD--INGLVHLPQLESLYLGNNKITD--ITVLSRLTKLDTLSLEDNQISDI-V-P 173 (210)
T ss_dssp CCCG-G-GGTTCTTCCEEECTTSCCCC--CGGGGGCTTCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCCC-G-G
T ss_pred cccc-c-cccccccccccccccccccc--cccccccccccccccccccccc--ccccccccccccccccccccccc-c-c
Confidence 8743 3 57778888888888887752 3356777888888888888773 23566778888888888888743 2 3
Q ss_pred ccccccccEEEccCCcCccCCchhhhcccCCCeEeecC
Q 005864 204 LGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSH 241 (673)
Q Consensus 204 l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~ 241 (673)
+.++++|+.|++++|++++. + .+..+++|+.|+|++
T Consensus 174 l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 174 LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFS 209 (210)
T ss_dssp GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEE
T ss_pred ccCCCCCCEEECCCCCCCCC-h-hhcCCCCCCEEEccC
Confidence 77788888888888888753 3 577888888888764
|
| >d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: Slit species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.75 E-value=8.6e-19 Score=161.76 Aligned_cols=175 Identities=23% Similarity=0.236 Sum_probs=86.6
Q ss_pred EEEcccCccCccCChhhhccccccccccccccccc-cCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCC
Q 005864 116 TLNFSMNNITGSIPPEIGKLYQLHKLDFSLNQIVG-EIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTN 194 (673)
Q Consensus 116 ~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~-~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n 194 (673)
+++.++++++ .+|..+. +++++|+|++|+|+. ..+..|..+++|+.|+|++|.+....+..|..+++|++|+|++|
T Consensus 12 ~v~Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N 88 (192)
T d1w8aa_ 12 TVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEEeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccc
Confidence 4445555554 2333321 345555555555543 22334445555555555555555555555555555555555555
Q ss_pred CCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCcc
Q 005864 195 KLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIPS 274 (673)
Q Consensus 195 ~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 274 (673)
+++...+..|.++++|+.|+|++|+|+++.+..|..+++|++|+|++|.+..... ...-...++.+.+..|.++...|.
T Consensus 89 ~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~~~~~~~-~~~~~~~l~~~~l~~~~~~c~~p~ 167 (192)
T d1w8aa_ 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH-LAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG-GHHHHHHHHHHCCSGGGCBBCSST
T ss_pred cccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccccccccc-hHHHhhhhhhhcccCCCeEeCCCh
Confidence 5554445555555555555555555555555555555555555555555542211 111112344445555555544443
Q ss_pred ccccCCCccEEEccCccccCCCC
Q 005864 275 CFEGMHGLSCIDISYNELLGLIP 297 (673)
Q Consensus 275 ~~~~~~~L~~l~l~~N~l~~~~~ 297 (673)
.+ ..++.++|+.|.+.+..+
T Consensus 168 ~l---~~~~l~~L~~n~l~C~~~ 187 (192)
T d1w8aa_ 168 KV---RDVQIKDLPHSEFKCSSE 187 (192)
T ss_dssp TT---TTSBGGGSCTTTCCCCCC
T ss_pred hh---cCCEeeecCHhhCcCCCC
Confidence 32 334445566666554443
|
| >d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Internalin LRR domain domain: Internalin B species: Listeria monocytogenes [TaxId: 1639]
Probab=99.74 E-value=1.2e-17 Score=154.93 Aligned_cols=180 Identities=23% Similarity=0.306 Sum_probs=125.4
Q ss_pred CCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEccc
Q 005864 42 LTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSM 121 (673)
Q Consensus 42 L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 121 (673)
+..+.++.+.+++... ...+.+|++|++++|.|+.+ +.++.+++|++|++++|++++.. .++++++|++|++++
T Consensus 20 ~i~~~l~~~~~~~~~~--~~~l~~l~~L~l~~~~i~~l--~~l~~l~nL~~L~Ls~N~l~~~~--~l~~l~~L~~L~l~~ 93 (199)
T d2omxa2 20 KMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNN 93 (199)
T ss_dssp HHHHHTTCSSTTSEEC--HHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCG--GGTTCTTCCEEECCS
T ss_pred HHHHHhCCCCCCCccC--HHHhcCCCEEECCCCCCCCc--cccccCCCcCcCccccccccCcc--cccCCcccccccccc
Confidence 3344566666664432 34567788888888887754 34667788888888888877543 377788888888888
Q ss_pred CccCccCChhhhccccccccccccccccccCCccccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCC
Q 005864 122 NNITGSIPPEIGKLYQLHKLDFSLNQIVGEIPIELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIP 201 (673)
Q Consensus 122 n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~ 201 (673)
|.+... + .+.++++|+.|++++|.+.. ...+..+++|+.|++++|++.. + +.+..+++|+.|++++|.+++.
T Consensus 94 n~~~~~-~-~l~~l~~L~~L~l~~~~~~~--~~~~~~l~~L~~L~l~~n~l~~-~-~~l~~~~~L~~L~l~~n~l~~l-- 165 (199)
T d2omxa2 94 NQIADI-T-PLANLTNLTGLTLFNNQITD--IDPLKNLTNLNRLELSSNTISD-I-SALSGLTSLQQLNFSSNQVTDL-- 165 (199)
T ss_dssp SCCCCC-G-GGTTCTTCSEEECCSSCCCC--CGGGTTCTTCSEEECCSSCCCC-C-GGGTTCTTCSEEECCSSCCCCC--
T ss_pred cccccc-c-cccccccccccccccccccc--ccccchhhhhHHhhhhhhhhcc-c-ccccccccccccccccccccCC--
Confidence 877633 2 47777888888888777753 2346677888888888887763 2 3577778888888888887743
Q ss_pred ccccccccccEEEccCCcCccCCchhhhcccCCCeE
Q 005864 202 ETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSEL 237 (673)
Q Consensus 202 ~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 237 (673)
..+.++++|+.|++++|++++. + .+..+++|+.|
T Consensus 166 ~~l~~l~~L~~L~ls~N~i~~i-~-~l~~L~~L~~L 199 (199)
T d2omxa2 166 KPLANLTTLERLDISSNKVSDI-S-VLAKLTNLESL 199 (199)
T ss_dssp GGGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCSEE
T ss_pred ccccCCCCCCEEECCCCCCCCC-c-cccCCCCCCcC
Confidence 2477778888888888887753 2 46777777765
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=5.1e-19 Score=187.41 Aligned_cols=283 Identities=19% Similarity=0.153 Sum_probs=167.2
Q ss_pred cccCCCCCCEEEeeCCccccC----CCccccCCCCCCEEEcccCcccccc----CccccC-CCCCcEEEccCccccccc-
Q 005864 11 SVGNFTNLKGLYLYSNSLSGS----VPGEIGNLMQLTNLEIDNNQLFGQI----PRSLRN-LASLNRVHLEQNHLTGNI- 80 (673)
Q Consensus 11 ~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n~i~~~~----~~~l~~-l~~L~~L~L~~n~i~~~~- 80 (673)
-+..++++++|+|++|+|+.. ++..+..+++|+.|||++|.|+... ...+.. ..+|++|+|++|+|+...
T Consensus 22 l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~it~~~~ 101 (460)
T d1z7xw1 22 LLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGC 101 (460)
T ss_dssp HHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGH
T ss_pred HHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCCCCCCEEECCCCCcccccc
Confidence 355667788888888877732 2344567788888888888776322 222222 346888888888877442
Q ss_pred ---ccccCCCCCccEEEccCCccccccccCc---------------------------------cccCCCcEEEcccCcc
Q 005864 81 ---SEVFGIYPNLTFLDISHNNFYGEIWSSW---------------------------------GKCQQLGTLNFSMNNI 124 (673)
Q Consensus 81 ---~~~~~~l~~L~~L~L~~n~i~~~~~~~~---------------------------------~~l~~L~~L~L~~n~l 124 (673)
+..+..+++|++|+|++|.++......+ .....++.+.++.+.+
T Consensus 102 ~~l~~~l~~~~~L~~L~L~~N~i~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ls~~~~ 181 (460)
T d1z7xw1 102 GVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDI 181 (460)
T ss_dssp HHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBC
T ss_pred ccccchhhccccccccccccccchhhhhhhhhhcccccccccccccccccccchhhhccccccccccccccccccccccc
Confidence 3456677888888888887653211111 1123344444444332
Q ss_pred Cc-----------------------------c----CChhhhccccccccccccccccc-----cCCccccCCCCCCEEE
Q 005864 125 TG-----------------------------S----IPPEIGKLYQLHKLDFSLNQIVG-----EIPIELGNLKSLNYLV 166 (673)
Q Consensus 125 ~~-----------------------------~----~~~~l~~l~~L~~L~l~~n~i~~-----~~~~~l~~l~~L~~L~ 166 (673)
.. . ....+...+.++.+++++|.+.. ...........++.|+
T Consensus 182 ~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~ 261 (460)
T d1z7xw1 182 NEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLW 261 (460)
T ss_dssp HHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEE
T ss_pred ccccccccccccccccccccccccccccccchhhhcccccccccccccccchhhccccccccchhhcccccccccccccc
Confidence 21 0 00112233455556666555432 1122233456777777
Q ss_pred ccCcccccc----CCccccCCCCCCEEEeCCCCCCCcCCccc-----cccccccEEEccCCcCccCCchhh----hcccC
Q 005864 167 LNGNKLSGN----LPRVLGSLSELEYLDLSTNKLSGSIPETL-----GNLLKVHYLNLSNNQFRKEFPVEL----EKLVQ 233 (673)
Q Consensus 167 L~~n~l~~~----~~~~l~~l~~L~~L~l~~n~l~~~~~~~l-----~~l~~L~~L~l~~n~l~~~~~~~~----~~l~~ 233 (673)
+++|.+... ....+...+.++.+++++|.+++.....+ .....|+.+++++|.++......+ ...++
T Consensus 262 l~~n~i~~~~~~~~~~~l~~~~~l~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~ 341 (460)
T d1z7xw1 262 IWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRF 341 (460)
T ss_dssp CTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSS
T ss_pred cccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccccchhhhhhhhcccccccccc
Confidence 777776532 12234556777888888887754222222 123468888888888776543333 44567
Q ss_pred CCeEeecCCcCCCCC----ccccc-CCCcccEEEecCcccccc----CccccccCCCccEEEccCcccc
Q 005864 234 LSELDLSHNFLGGEI----PPQIC-NLESLEKLNVSHNNLSGL----IPSCFEGMHGLSCIDISYNELL 293 (673)
Q Consensus 234 L~~L~ls~N~l~~~~----~~~~~-~l~~L~~L~l~~N~l~~~----~~~~~~~~~~L~~l~l~~N~l~ 293 (673)
|++|+|++|.+.+.. +..+. ..+.|++|+|++|+|+.. +...+..+++|++|++++|+++
T Consensus 342 L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~ 410 (460)
T d1z7xw1 342 LLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 410 (460)
T ss_dssp CCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred hhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCC
Confidence 888888888886432 22332 356688888888888753 3345666788888888888875
|
| >d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Leucine rich effector protein YopM domain: Leucine rich effector protein YopM species: Yersinia pestis [TaxId: 632]
Probab=99.68 E-value=2.3e-15 Score=152.98 Aligned_cols=246 Identities=26% Similarity=0.216 Sum_probs=150.3
Q ss_pred CCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEc
Q 005864 40 MQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNF 119 (673)
Q Consensus 40 ~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 119 (673)
.+|++|||++|+++ .+|+. +++|++|+|++|+|+.++. .+.+|+.|++++|.++.+. . + .+.|++|++
T Consensus 38 ~~l~~LdLs~~~L~-~lp~~---~~~L~~L~Ls~N~l~~lp~----~~~~L~~L~l~~n~l~~l~-~-l--p~~L~~L~L 105 (353)
T d1jl5a_ 38 RQAHELELNNLGLS-SLPEL---PPHLESLVASCNSLTELPE----LPQSLKSLLVDNNNLKALS-D-L--PPLLEYLGV 105 (353)
T ss_dssp HTCSEEECTTSCCS-CCCSC---CTTCSEEECCSSCCSSCCC----CCTTCCEEECCSSCCSCCC-S-C--CTTCCEEEC
T ss_pred cCCCEEEeCCCCCC-CCCCC---CCCCCEEECCCCCCccccc----chhhhhhhhhhhcccchhh-h-h--ccccccccc
Confidence 37999999999998 56753 5789999999999996653 3568999999999987542 1 1 246999999
Q ss_pred ccCccCccCChhhhccccccccccccccccccCC------------------ccccCCCCCCEEEccCccccccC-----
Q 005864 120 SMNNITGSIPPEIGKLYQLHKLDFSLNQIVGEIP------------------IELGNLKSLNYLVLNGNKLSGNL----- 176 (673)
Q Consensus 120 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~------------------~~l~~l~~L~~L~L~~n~l~~~~----- 176 (673)
++|.++. +|. ++.+++|+.|++++|.+..... ..+..++.++.|.+++|.+....
T Consensus 106 ~~n~l~~-lp~-~~~l~~L~~L~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n~~~~~~~~~~~ 183 (353)
T d1jl5a_ 106 SNNQLEK-LPE-LQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLS 183 (353)
T ss_dssp CSSCCSS-CCC-CTTCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSSCCCCCTT
T ss_pred ccccccc-ccc-hhhhccceeeccccccccccccccccccchhhccccccccccccccccceeccccccccccccccccc
Confidence 9999994 453 5789999999999998763211 12334455566666555544210
Q ss_pred -------------CccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCc
Q 005864 177 -------------PRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNF 243 (673)
Q Consensus 177 -------------~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~ 243 (673)
...+..++.|+.+++++|... ..+.. ..++..+.+.+|.+... +.. ...+...++..|.
T Consensus 184 ~~~l~~~~~~~~~~~~~~~l~~L~~l~l~~n~~~-~~~~~---~~~l~~~~~~~~~~~~~-~~~---~~~l~~~~~~~~~ 255 (353)
T d1jl5a_ 184 LESIVAGNNILEELPELQNLPFLTTIYADNNLLK-TLPDL---PPSLEALNVRDNYLTDL-PEL---PQSLTFLDVSENI 255 (353)
T ss_dssp CCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCS-SCCSC---CTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSC
T ss_pred cccccccccccccccccccccccccccccccccc-ccccc---ccccccccccccccccc-ccc---ccccccccccccc
Confidence 001223344444444444443 12211 22344444444444321 111 1123333333332
Q ss_pred CCC----------------CCcccccCCCcccEEEecCccccccCccccccCCCccEEEccCccccCCCCCCcccccCcc
Q 005864 244 LGG----------------EIPPQICNLESLEKLNVSHNNLSGLIPSCFEGMHGLSCIDISYNELLGLIPNSTGFQYDPI 307 (673)
Q Consensus 244 l~~----------------~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~ 307 (673)
+.+ .++.....+++|++|+|++|+|+.+ |. .+++|+.|++++|+|+..+ .. ......
T Consensus 256 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~l-p~---~~~~L~~L~L~~N~L~~l~-~~--~~~L~~ 328 (353)
T d1jl5a_ 256 FSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIEL-PA---LPPRLERLIASFNHLAEVP-EL--PQNLKQ 328 (353)
T ss_dssp CSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSCCC-CC--CTTCCE
T ss_pred ccccccccchhcccccccCccccccccCCCCCEEECCCCccCcc-cc---ccCCCCEEECCCCcCCccc-cc--cCCCCE
Confidence 221 1111123357899999999999855 43 3688999999999998643 32 223445
Q ss_pred ccccCCc
Q 005864 308 QALRGNR 314 (673)
Q Consensus 308 ~~~~~n~ 314 (673)
..+.+|+
T Consensus 329 L~L~~N~ 335 (353)
T d1jl5a_ 329 LHVEYNP 335 (353)
T ss_dssp EECCSSC
T ss_pred EECcCCc
Confidence 5666775
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.64 E-value=1.8e-17 Score=168.32 Aligned_cols=238 Identities=15% Similarity=0.125 Sum_probs=127.1
Q ss_pred ccccCCCCCCEEEcccCccccc----cCccccCCCCCcEEEccCcccccc----------cccccCCCCCccEEEccCCc
Q 005864 34 GEIGNLMQLTNLEIDNNQLFGQ----IPRSLRNLASLNRVHLEQNHLTGN----------ISEVFGIYPNLTFLDISHNN 99 (673)
Q Consensus 34 ~~~~~l~~L~~L~L~~n~i~~~----~~~~l~~l~~L~~L~L~~n~i~~~----------~~~~~~~l~~L~~L~L~~n~ 99 (673)
..+.....|+.|+|++|.|... +...+...++|+.|+++++..... ....+...++|++|+|++|.
T Consensus 25 ~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~ 104 (344)
T d2ca6a1 25 AVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA 104 (344)
T ss_dssp HHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred HHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCcccccccccc
Confidence 3344455555555555555422 122344445555555555433211 11233445556666666665
Q ss_pred ccccccc----CccccCCCcEEEcccCccCccCChh-------------hhcccccccccccccccccc----CCccccC
Q 005864 100 FYGEIWS----SWGKCQQLGTLNFSMNNITGSIPPE-------------IGKLYQLHKLDFSLNQIVGE----IPIELGN 158 (673)
Q Consensus 100 i~~~~~~----~~~~l~~L~~L~L~~n~l~~~~~~~-------------l~~l~~L~~L~l~~n~i~~~----~~~~l~~ 158 (673)
++..... .+...++|+.|++++|.+....... ....+.|+.|++++|.++.. +...+..
T Consensus 105 i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~ 184 (344)
T d2ca6a1 105 FGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 184 (344)
T ss_dssp CCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHH
T ss_pred cccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccchhhh
Confidence 5443222 2234455666666666554211111 12234566666666665432 2223345
Q ss_pred CCCCCEEEccCcccccc-----CCccccCCCCCCEEEeCCCCCCCc----CCccccccccccEEEccCCcCccCCchhh-
Q 005864 159 LKSLNYLVLNGNKLSGN-----LPRVLGSLSELEYLDLSTNKLSGS----IPETLGNLLKVHYLNLSNNQFRKEFPVEL- 228 (673)
Q Consensus 159 l~~L~~L~L~~n~l~~~-----~~~~l~~l~~L~~L~l~~n~l~~~----~~~~l~~l~~L~~L~l~~n~l~~~~~~~~- 228 (673)
.++|+.|+|++|.++.. +...+..+++|+.|++++|.++.. +...+..+++|++|+|++|.|++.....+
T Consensus 185 ~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~~l~ 264 (344)
T d2ca6a1 185 HRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVV 264 (344)
T ss_dssp CTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHH
T ss_pred hhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhHHHH
Confidence 56777777777776531 233456667777777777776532 23445666777777777777765433333
Q ss_pred ---hc--ccCCCeEeecCCcCCCCCc----cccc-CCCcccEEEecCcccccc
Q 005864 229 ---EK--LVQLSELDLSHNFLGGEIP----PQIC-NLESLEKLNVSHNNLSGL 271 (673)
Q Consensus 229 ---~~--l~~L~~L~ls~N~l~~~~~----~~~~-~l~~L~~L~l~~N~l~~~ 271 (673)
.. .+.|++|++++|.|..... ..+. +.++|++|+|++|++...
T Consensus 265 ~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~~ 317 (344)
T d2ca6a1 265 DAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 317 (344)
T ss_dssp HHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCCc
Confidence 22 2467788888887764322 2222 456788888888887643
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=6.2e-17 Score=158.94 Aligned_cols=126 Identities=13% Similarity=0.136 Sum_probs=68.2
Q ss_pred CEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccc-cccccCCCCCccEEEccC
Q 005864 19 KGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGN-ISEVFGIYPNLTFLDISH 97 (673)
Q Consensus 19 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~-~~~~~~~l~~L~~L~L~~ 97 (673)
++|||+++.+.......+.. ..+..+.++.+.+..... ......+|++|+|++|.++.. ....+..+++|++|+|++
T Consensus 3 ~~lDLs~~~l~~~~l~~l~~-~~~~~lrl~~~~~~~~~~-~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~ 80 (284)
T d2astb2 3 QTLDLTGKNLHPDVTGRLLS-QGVIAFRCPRSFMDQPLA-EHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEG 80 (284)
T ss_dssp SEEECTTCBCCHHHHHHHHH-TTCSEEECTTCEECSCCC-SCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTT
T ss_pred CEEECCCCCCCchHHHHHHh-ccceEeeccccccccchh-hhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccc
Confidence 46777776654221111111 234566666555542222 223445677777777766532 334566677777777777
Q ss_pred CccccccccCccccCCCcEEEcccC-ccCccC-Chhhhccccccccccccc
Q 005864 98 NNFYGEIWSSWGKCQQLGTLNFSMN-NITGSI-PPEIGKLYQLHKLDFSLN 146 (673)
Q Consensus 98 n~i~~~~~~~~~~l~~L~~L~L~~n-~l~~~~-~~~l~~l~~L~~L~l~~n 146 (673)
|.+.+.....++.+++|++|+++++ .++... ...+.++++|++|+++++
T Consensus 81 ~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~L~~L~ls~c 131 (284)
T d2astb2 81 LRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWC 131 (284)
T ss_dssp CBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCC
T ss_pred cCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHhccccccccc
Confidence 7766555566666677777777663 444211 112234555666665553
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=3.8e-16 Score=138.65 Aligned_cols=130 Identities=18% Similarity=0.113 Sum_probs=90.7
Q ss_pred CcccCCCCCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCC
Q 005864 10 PSVGNFTNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPN 89 (673)
Q Consensus 10 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~ 89 (673)
+.+.+..++++|+|++|+|+. +++.+..+++|+.|+|++|+|+.. ..|..+++|++|++++|+++.+.+..+..+++
T Consensus 12 ~~~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~ 88 (162)
T d1a9na_ 12 AQYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 88 (162)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred HhccCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccCCCccccccccc
Confidence 346677778888888888874 356667778888888888888743 34777788888888888887777767777788
Q ss_pred ccEEEccCCccccccc-cCccccCCCcEEEcccCccCccCC---hhhhccccccccc
Q 005864 90 LTFLDISHNNFYGEIW-SSWGKCQQLGTLNFSMNNITGSIP---PEIGKLYQLHKLD 142 (673)
Q Consensus 90 L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~---~~l~~l~~L~~L~ 142 (673)
|++|++++|+|+.... ..+..+++|++|++++|.++.... ..+..+++|+.||
T Consensus 89 L~~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i~~~~~~r~~~i~~lp~L~~LD 145 (162)
T d1a9na_ 89 LTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLD 145 (162)
T ss_dssp CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEET
T ss_pred cccceeccccccccccccccccccccchhhcCCCccccccchHHHHHHHCCCcCeeC
Confidence 8888888887765432 456677777777777777763221 2355566666655
|
| >d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Ribonuclease inhibitor species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=7e-18 Score=178.52 Aligned_cols=288 Identities=21% Similarity=0.156 Sum_probs=198.8
Q ss_pred cCCCcccCCCCCCEEEeeCCccccCC----Ccccc-CCCCCCEEEcccCccccc----cCccccCCCCCcEEEccCcccc
Q 005864 7 AIPPSVGNFTNLKGLYLYSNSLSGSV----PGEIG-NLMQLTNLEIDNNQLFGQ----IPRSLRNLASLNRVHLEQNHLT 77 (673)
Q Consensus 7 ~~p~~~~~l~~L~~L~L~~n~i~~~~----~~~~~-~l~~L~~L~L~~n~i~~~----~~~~l~~l~~L~~L~L~~n~i~ 77 (673)
.++..+..+++|++|+|++|.|+... ...+. ...+|++|+|++|++++. ++.++..+++|++|+|++|.|+
T Consensus 46 ~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 46 DISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp HHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCH
T ss_pred HHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCCCCCCEEECCCCCccccccccccchhhccccccccccccccch
Confidence 44566788999999999999997422 22232 235899999999999754 3567788999999999999876
Q ss_pred ccccc---------------------------------ccCCCCCccEEEccCCccccc---------------------
Q 005864 78 GNISE---------------------------------VFGIYPNLTFLDISHNNFYGE--------------------- 103 (673)
Q Consensus 78 ~~~~~---------------------------------~~~~l~~L~~L~L~~n~i~~~--------------------- 103 (673)
..... .+...+.++.++++++.+...
T Consensus 126 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ls~~~~~~~~~~~~~~~l~~~~~~~~~l~~ 205 (460)
T d1z7xw1 126 DAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKL 205 (460)
T ss_dssp HHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEEC
T ss_pred hhhhhhhhhcccccccccccccccccccchhhhccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 32111 112234566666665543210
Q ss_pred --------c----ccCccccCCCcEEEcccCccCcc-----CChhhhcccccccccccccccccc----CCccccCCCCC
Q 005864 104 --------I----WSSWGKCQQLGTLNFSMNNITGS-----IPPEIGKLYQLHKLDFSLNQIVGE----IPIELGNLKSL 162 (673)
Q Consensus 104 --------~----~~~~~~l~~L~~L~L~~n~l~~~-----~~~~l~~l~~L~~L~l~~n~i~~~----~~~~l~~l~~L 162 (673)
. ...+...+.++.+.+.+|.+... ..........|+.|++++|.+... ....+...+.+
T Consensus 206 ~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~n~~~~~~~~~~~~~~~~~~~~l~~l~l~~n~i~~~~~~~~~~~l~~~~~l 285 (460)
T d1z7xw1 206 ESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESL 285 (460)
T ss_dssp TTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTC
T ss_pred ccccccchhhhcccccccccccccccchhhccccccccchhhcccccccccccccccccccccccccccccccccccccc
Confidence 0 01123457788999998876532 222334567899999999988643 23345567899
Q ss_pred CEEEccCccccccCCccc-----cCCCCCCEEEeCCCCCCCcCCccc----cccccccEEEccCCcCccCCchh----hh
Q 005864 163 NYLVLNGNKLSGNLPRVL-----GSLSELEYLDLSTNKLSGSIPETL----GNLLKVHYLNLSNNQFRKEFPVE----LE 229 (673)
Q Consensus 163 ~~L~L~~n~l~~~~~~~l-----~~l~~L~~L~l~~n~l~~~~~~~l----~~l~~L~~L~l~~n~l~~~~~~~----~~ 229 (673)
+.+++++|.+++.....+ .....|+.+++++|.++......+ ...++|++|+|++|++++..... +.
T Consensus 286 ~~l~l~~n~i~~~~~~~l~~~l~~~~~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~ 365 (460)
T d1z7xw1 286 KELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLG 365 (460)
T ss_dssp CEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHT
T ss_pred cccccccccccccccchhhccccccccccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhh
Confidence 999999999975322222 244689999999999875543333 44568999999999997643333 32
Q ss_pred -cccCCCeEeecCCcCCCC----CcccccCCCcccEEEecCccccccCccc----cc-cCCCccEEEccCccccC
Q 005864 230 -KLVQLSELDLSHNFLGGE----IPPQICNLESLEKLNVSHNNLSGLIPSC----FE-GMHGLSCIDISYNELLG 294 (673)
Q Consensus 230 -~l~~L~~L~ls~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~~~----~~-~~~~L~~l~l~~N~l~~ 294 (673)
..+.|++|+|++|.|++. ++..+...++|++|+|++|+|+...... +. ....|+.|++.+|.+..
T Consensus 366 ~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~l~l~~~~~~~ 440 (460)
T d1z7xw1 366 QPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 440 (460)
T ss_dssp STTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred cccCCCCEEECCCCCCChHHHHHHHHHHhcCCCCCEEECCCCcCCHHHHHHHHHHHHhCCCccCEEECCCCCCCH
Confidence 356799999999999853 3345667799999999999998643333 32 33479999999998764
|
| >d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Rna1p (RanGAP1), N-terminal domain domain: Rna1p (RanGAP1), N-terminal domain species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.62 E-value=4e-17 Score=165.67 Aligned_cols=241 Identities=18% Similarity=0.196 Sum_probs=179.3
Q ss_pred ccCccccCCCCCcEEEccCcccccc----cccccCCCCCccEEEccCCccccc----------cccCccccCCCcEEEcc
Q 005864 55 QIPRSLRNLASLNRVHLEQNHLTGN----ISEVFGIYPNLTFLDISHNNFYGE----------IWSSWGKCQQLGTLNFS 120 (673)
Q Consensus 55 ~~~~~l~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n~i~~~----------~~~~~~~l~~L~~L~L~ 120 (673)
.+..++.....|+.|+|++|.|+.. ....+...++|+.|+++++..... ....+..+++|+.|+|+
T Consensus 22 ~l~~~L~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~ 101 (344)
T d2ca6a1 22 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 101 (344)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccc
Confidence 3456678889999999999999743 334567889999999998755422 12334567899999999
Q ss_pred cCccCccC----ChhhhccccccccccccccccccCCcc-------------ccCCCCCCEEEccCcccccc----CCcc
Q 005864 121 MNNITGSI----PPEIGKLYQLHKLDFSLNQIVGEIPIE-------------LGNLKSLNYLVLNGNKLSGN----LPRV 179 (673)
Q Consensus 121 ~n~l~~~~----~~~l~~l~~L~~L~l~~n~i~~~~~~~-------------l~~l~~L~~L~L~~n~l~~~----~~~~ 179 (673)
+|.++... ...+...++|+.|++++|.+....... ....+.|+.|.+++|.++.. +...
T Consensus 102 ~n~i~~~~~~~l~~~l~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~ 181 (344)
T d2ca6a1 102 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 181 (344)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred ccccccccccchhhhhcccccchheecccccccccccccccccccccccccccccCcccceeecccccccccccccccch
Confidence 99998643 334556789999999999875321111 13457899999999998743 2334
Q ss_pred ccCCCCCCEEEeCCCCCCCc-----CCccccccccccEEEccCCcCccC----CchhhhcccCCCeEeecCCcCCCCCcc
Q 005864 180 LGSLSELEYLDLSTNKLSGS-----IPETLGNLLKVHYLNLSNNQFRKE----FPVELEKLVQLSELDLSHNFLGGEIPP 250 (673)
Q Consensus 180 l~~l~~L~~L~l~~n~l~~~-----~~~~l~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~ls~N~l~~~~~~ 250 (673)
+...++|+.|++++|.+... +...+..+++|+.|++++|.++.. +...+..+++|++|+|++|.|.+....
T Consensus 182 l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g~~ 261 (344)
T d2ca6a1 182 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 261 (344)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred hhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchhhH
Confidence 56778999999999998642 334567889999999999998753 334567889999999999999865333
Q ss_pred cc----c--CCCcccEEEecCccccccC----ccccc-cCCCccEEEccCccccCC
Q 005864 251 QI----C--NLESLEKLNVSHNNLSGLI----PSCFE-GMHGLSCIDISYNELLGL 295 (673)
Q Consensus 251 ~~----~--~l~~L~~L~l~~N~l~~~~----~~~~~-~~~~L~~l~l~~N~l~~~ 295 (673)
.+ . ..+.|++|++++|+|+... ...+. +.+.|+.|++++|++...
T Consensus 262 ~l~~~l~~~~~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~~ 317 (344)
T d2ca6a1 262 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 317 (344)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHHHHhhhccCCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCCc
Confidence 33 2 2467999999999987532 23343 578999999999998643
|
| >d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: Cyclin A/CDK2-associated p19, Skp2 domain: Cyclin A/CDK2-associated p19, Skp2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.59 E-value=6.7e-16 Score=151.42 Aligned_cols=201 Identities=16% Similarity=0.184 Sum_probs=119.4
Q ss_pred CCCEEEeeCCccccCCCccccCCCCCCEEEcccCccccc-cCccccCCCCCcEEEccCcccccccccccCCCCCccEEEc
Q 005864 17 NLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQ-IPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDI 95 (673)
Q Consensus 17 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~-~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 95 (673)
.+..+.++.+.+..... ......+|++|||++|.++.. ....+.++++|++|+|++|.++......+..+++|++|+|
T Consensus 24 ~~~~lrl~~~~~~~~~~-~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L 102 (284)
T d2astb2 24 GVIAFRCPRSFMDQPLA-EHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNL 102 (284)
T ss_dssp TCSEEECTTCEECSCCC-SCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEEC
T ss_pred cceEeeccccccccchh-hhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccc
Confidence 35566776666653333 334557899999999988744 3455788999999999999998777788889999999999
Q ss_pred cCC-ccccccccC-ccccCCCcEEEcccC-ccCcc-CChhhhc-cccccccccccc--ccccc-CCccccCCCCCCEEEc
Q 005864 96 SHN-NFYGEIWSS-WGKCQQLGTLNFSMN-NITGS-IPPEIGK-LYQLHKLDFSLN--QIVGE-IPIELGNLKSLNYLVL 167 (673)
Q Consensus 96 ~~n-~i~~~~~~~-~~~l~~L~~L~L~~n-~l~~~-~~~~l~~-l~~L~~L~l~~n--~i~~~-~~~~l~~l~~L~~L~L 167 (673)
++| .++...... +.++++|++|+++++ .++.. ....+.. .++|+.|+++++ .++.. +......+++|++|++
T Consensus 103 s~c~~itd~~l~~l~~~~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L 182 (284)
T d2astb2 103 SGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDL 182 (284)
T ss_dssp TTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEEC
T ss_pred cccccccccccchhhHHHHhccccccccccccccccchhhhcccccccchhhhccccccccccccccccccccccccccc
Confidence 995 565433222 457899999999986 44421 1122222 245666666543 22211 1111233455555555
Q ss_pred cCc-cccccCCccccCCCCCCEEEeCCC-CCCCcCCccccccccccEEEccCC
Q 005864 168 NGN-KLSGNLPRVLGSLSELEYLDLSTN-KLSGSIPETLGNLLKVHYLNLSNN 218 (673)
Q Consensus 168 ~~n-~l~~~~~~~l~~l~~L~~L~l~~n-~l~~~~~~~l~~l~~L~~L~l~~n 218 (673)
++| .+++.....+..+++|++|++++| .+++.....++++++|+.|+++++
T Consensus 183 ~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~L~~L~l~~~ 235 (284)
T d2astb2 183 SDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 235 (284)
T ss_dssp TTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred ccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCCCCEEeeeCC
Confidence 553 244333344445555555555553 344333334444445555555444
|
| >d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: U2A'-like domain: Splicesomal U2A' protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=1.6e-15 Score=134.51 Aligned_cols=110 Identities=15% Similarity=0.099 Sum_probs=59.5
Q ss_pred ccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCc
Q 005864 36 IGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLG 115 (673)
Q Consensus 36 ~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 115 (673)
|.+..+|++|+|++|+|+. ++..+..+++|+.|+|++|+|+.+ +.|..+++|++|++++|+++.+.+..+..+++|+
T Consensus 14 ~~n~~~lr~L~L~~n~I~~-i~~~~~~l~~L~~L~Ls~N~i~~l--~~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L~ 90 (162)
T d1a9na_ 14 YTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 90 (162)
T ss_dssp EECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred ccCcCcCcEEECCCCCCCc-cCccccccccCCEEECCCCCCCcc--CCcccCcchhhhhcccccccCCCccccccccccc
Confidence 4455566666666666653 344455566666666666666644 2355566666666666666554444445555566
Q ss_pred EEEcccCccCccCC-hhhhccccccccccccccc
Q 005864 116 TLNFSMNNITGSIP-PEIGKLYQLHKLDFSLNQI 148 (673)
Q Consensus 116 ~L~L~~n~l~~~~~-~~l~~l~~L~~L~l~~n~i 148 (673)
.|++++|+|+.... ..+..+++|++|++++|.+
T Consensus 91 ~L~L~~N~i~~~~~l~~l~~l~~L~~L~l~~N~i 124 (162)
T d1a9na_ 91 ELILTNNSLVELGDLDPLASLKSLTYLCILRNPV 124 (162)
T ss_dssp EEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGG
T ss_pred cceeccccccccccccccccccccchhhcCCCcc
Confidence 66666555553211 2334444444444444444
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.55 E-value=9.2e-15 Score=123.07 Aligned_cols=102 Identities=23% Similarity=0.296 Sum_probs=72.5
Q ss_pred CEEEeeCCccccCCCccccCCCCCCEEEcccCccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCC
Q 005864 19 KGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNNQLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHN 98 (673)
Q Consensus 19 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 98 (673)
+.|+|++|+|+. .+ .+..+++|++|++++|+|+ .+|..|..+++|+.|++++|+|+.++ .+..+++|++|++++|
T Consensus 1 R~L~Ls~n~l~~-l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~l~--~~~~l~~L~~L~l~~N 75 (124)
T d1dcea3 1 RVLHLAHKDLTV-LC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENVD--GVANLPRLQELLLCNN 75 (124)
T ss_dssp SEEECTTSCCSS-CC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCG--GGTTCSSCCEEECCSS
T ss_pred CEEEcCCCCCCC-Cc-ccccCCCCCEEECCCCccC-cchhhhhhhhcccccccccccccccC--ccccccccCeEECCCC
Confidence 467888888873 33 3777788888888888877 45666777888888888888877653 4677777777777777
Q ss_pred cccccc-ccCccccCCCcEEEcccCccC
Q 005864 99 NFYGEI-WSSWGKCQQLGTLNFSMNNIT 125 (673)
Q Consensus 99 ~i~~~~-~~~~~~l~~L~~L~L~~n~l~ 125 (673)
+|+... ...+..+++|+.|++++|.++
T Consensus 76 ~i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 76 RLQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred ccCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 776543 245666677777777777665
|
| >d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain domain: Rab geranylgeranyltransferase alpha-subunit, C-terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.52 E-value=3.6e-14 Score=119.39 Aligned_cols=101 Identities=30% Similarity=0.324 Sum_probs=47.1
Q ss_pred EEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCc
Q 005864 164 YLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNF 243 (673)
Q Consensus 164 ~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~ 243 (673)
.|+|++|+++ .++ .+..+++|++|++++|.++ .+|..+..+++|+.|++++|.|++. + .+..+++|+.|++++|+
T Consensus 2 ~L~Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~~l-~-~~~~l~~L~~L~l~~N~ 76 (124)
T d1dcea3 2 VLHLAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALENV-D-GVANLPRLQELLLCNNR 76 (124)
T ss_dssp EEECTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSSC
T ss_pred EEEcCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccccc-C-ccccccccCeEECCCCc
Confidence 4455555554 222 2444455555555555554 3344444555555555555555432 2 24444555555555555
Q ss_pred CCCCC-cccccCCCcccEEEecCcccc
Q 005864 244 LGGEI-PPQICNLESLEKLNVSHNNLS 269 (673)
Q Consensus 244 l~~~~-~~~~~~l~~L~~L~l~~N~l~ 269 (673)
+++.. ...+..+++|+.|++++|+++
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~i~ 103 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNSLC 103 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred cCCCCCchhhcCCCCCCEEECCCCcCC
Confidence 54221 123444455555555555544
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=6.8e-13 Score=116.49 Aligned_cols=108 Identities=23% Similarity=0.259 Sum_probs=86.9
Q ss_pred CCCCEEEeeCCccccCCCccccCCCCCCEEEcccC-ccccccCccccCCCCCcEEEccCcccccccccccCCCCCccEEE
Q 005864 16 TNLKGLYLYSNSLSGSVPGEIGNLMQLTNLEIDNN-QLFGQIPRSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLD 94 (673)
Q Consensus 16 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n-~i~~~~~~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 94 (673)
.....++.++++++ ..|..+..+++|++|++++| .|+...+.+|.++++|+.|+|++|+|+.+.+.+|..+++|++|+
T Consensus 8 ~~~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~ 86 (156)
T d2ifga3 8 HGSSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLN 86 (156)
T ss_dssp SSSSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEE
T ss_pred CCCCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCccccccccccccccee
Confidence 34567888888887 56777888888888888765 48766677888888888888888888888888888888888888
Q ss_pred ccCCccccccccCccccCCCcEEEcccCccC
Q 005864 95 ISHNNFYGEIWSSWGKCQQLGTLNFSMNNIT 125 (673)
Q Consensus 95 L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~ 125 (673)
|++|+|+.+.+..|..+ +|+.|+|++|.+.
T Consensus 87 Ls~N~l~~l~~~~~~~~-~l~~L~L~~Np~~ 116 (156)
T d2ifga3 87 LSFNALESLSWKTVQGL-SLQELVLSGNPLH 116 (156)
T ss_dssp CCSSCCSCCCSTTTCSC-CCCEEECCSSCCC
T ss_pred ccCCCCcccChhhhccc-cccccccCCCccc
Confidence 88888887777666554 6888888888875
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.39 E-value=7.1e-15 Score=135.17 Aligned_cols=132 Identities=24% Similarity=0.241 Sum_probs=80.5
Q ss_pred cccCCCCCCEEEccCccccccCCccccCCCCCCEEEeCCCCCCCcCCccccccccccEEEccCCcCccCCchhhhcccCC
Q 005864 155 ELGNLKSLNYLVLNGNKLSGNLPRVLGSLSELEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQL 234 (673)
Q Consensus 155 ~l~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 234 (673)
.+..+++|++|+|++|+|+. ++ .+..+++|+.|++++|.++ .++..+..+++|+.|++++|+++.. ..+..+++|
T Consensus 43 sl~~L~~L~~L~Ls~n~I~~-i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~l--~~~~~l~~L 117 (198)
T d1m9la_ 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASL--SGIEKLVNL 117 (198)
T ss_dssp HHHHTTTCCEEECSEEEESC-CC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCCH--HHHHHHHHS
T ss_pred HHhcccccceeECcccCCCC-cc-cccCCccccChhhcccccc-ccccccccccccccccccccccccc--ccccccccc
Confidence 34455566666666666653 22 3555666666666666665 3444444455677777777777642 346667777
Q ss_pred CeEeecCCcCCCCCc-ccccCCCcccEEEecCccccccCcc----------ccccCCCccEEEccCcccc
Q 005864 235 SELDLSHNFLGGEIP-PQICNLESLEKLNVSHNNLSGLIPS----------CFEGMHGLSCIDISYNELL 293 (673)
Q Consensus 235 ~~L~ls~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~----------~~~~~~~L~~l~l~~N~l~ 293 (673)
+.|++++|++++... ..+..+++|+.|+|++|++....+. .+..+|+|+.|| +.+++
T Consensus 118 ~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~r~~vi~~lp~L~~LD--~~~I~ 185 (198)
T d1m9la_ 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHHHHCTTTTHHHHHHHHHHHCSSCCEES--SGGGT
T ss_pred cccccccchhccccccccccCCCccceeecCCCccccCcccccchhhHHHHHHHHCCCcCEeC--CccCC
Confidence 777777777763221 3567777777777777777544332 256678888876 44444
|
| >d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: Outer arm dynein light chain 1 family: Outer arm dynein light chain 1 domain: Outer arm dynein light chain 1 species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]
Probab=99.39 E-value=8.9e-15 Score=134.48 Aligned_cols=112 Identities=26% Similarity=0.223 Sum_probs=55.8
Q ss_pred ccccCCCCCcEEEccCcccccccccccCCCCCccEEEccCCccccccccCccccCCCcEEEcccCccCccCChhhhcccc
Q 005864 58 RSLRNLASLNRVHLEQNHLTGNISEVFGIYPNLTFLDISHNNFYGEIWSSWGKCQQLGTLNFSMNNITGSIPPEIGKLYQ 137 (673)
Q Consensus 58 ~~l~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 137 (673)
.++..+++|++|+|++|+|+.+. .|..+++|++|+|++|.|+.+ +..+..+++|+.|++++|+++.. ..+..+++
T Consensus 42 ~sl~~L~~L~~L~Ls~n~I~~i~--~l~~l~~L~~L~Ls~N~i~~i-~~~~~~~~~L~~L~l~~N~i~~l--~~~~~l~~ 116 (198)
T d1m9la_ 42 ATLSTLKACKHLALSTNNIEKIS--SLSGMENLRILSLGRNLIKKI-ENLDAVADTLEELWISYNQIASL--SGIEKLVN 116 (198)
T ss_dssp HHHHHTTTCCEEECSEEEESCCC--CHHHHTTCCEEECCEEEECSC-SSHHHHHHHCCEEECSEEECCCH--HHHHHHHH
T ss_pred hHHhcccccceeECcccCCCCcc--cccCCccccChhhcccccccc-ccccccccccccccccccccccc--cccccccc
Confidence 34444455555555555544331 244445555555555554422 22223334555555555555532 33555566
Q ss_pred ccccccccccccccCC-ccccCCCCCCEEEccCccccc
Q 005864 138 LHKLDFSLNQIVGEIP-IELGNLKSLNYLVLNGNKLSG 174 (673)
Q Consensus 138 L~~L~l~~n~i~~~~~-~~l~~l~~L~~L~L~~n~l~~ 174 (673)
|+.|++++|+++.... ..+..+++|+.|+|++|++..
T Consensus 117 L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~l~~ 154 (198)
T d1m9la_ 117 LRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp SSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSHHHH
T ss_pred ccccccccchhccccccccccCCCccceeecCCCcccc
Confidence 6666666666553211 245556666666666666553
|
| >d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: Ngr ectodomain-like domain: High affinity nerve growth factor receptor, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.35 E-value=1e-12 Score=115.34 Aligned_cols=108 Identities=20% Similarity=0.140 Sum_probs=64.6
Q ss_pred CCEEEeCCCCCCCcCCccccccccccEEEccCC-cCccCCchhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEec
Q 005864 186 LEYLDLSTNKLSGSIPETLGNLLKVHYLNLSNN-QFRKEFPVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVS 264 (673)
Q Consensus 186 L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~ 264 (673)
.+.++++++.+. ..|..+..+++|++|++++| .++.+.+..|.++++|+.|+|++|+|+...+.+|..+++|++|+|+
T Consensus 10 ~~~l~c~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls 88 (156)
T d2ifga3 10 SSGLRCTRDGAL-DSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (156)
T ss_dssp SSCEECCSSCCC-TTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CCeEEecCCCCc-cCcccccCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceecc
Confidence 344555555555 34555555566666666544 3555555566666666666666666665555566666666666666
Q ss_pred CccccccCccccccCCCccEEEccCccccCC
Q 005864 265 HNNLSGLIPSCFEGMHGLSCIDISYNELLGL 295 (673)
Q Consensus 265 ~N~l~~~~~~~~~~~~~L~~l~l~~N~l~~~ 295 (673)
+|+|+.+.+..|..+ .|+.|+|++|+|.+.
T Consensus 89 ~N~l~~l~~~~~~~~-~l~~L~L~~Np~~C~ 118 (156)
T d2ifga3 89 FNALESLSWKTVQGL-SLQELVLSGNPLHCS 118 (156)
T ss_dssp SSCCSCCCSTTTCSC-CCCEEECCSSCCCCC
T ss_pred CCCCcccChhhhccc-cccccccCCCcccCC
Confidence 666665555555443 466777777776543
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=98.57 E-value=1.2e-07 Score=90.48 Aligned_cols=150 Identities=15% Similarity=0.113 Sum_probs=104.6
Q ss_pred HHHHHHhcCCCccceeccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecC
Q 005864 395 EEIIRATKNFDAEQCIGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHP 473 (673)
Q Consensus 395 ~~~~~~~~~~~~~~~ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~ 473 (673)
+|+....+.|+.++..+.++.+.||+... +++.+++|+........ ...+.+|...+..+. +--+.+++.++..+
T Consensus 7 ~~l~~~~~~~~~~~~~~G~s~~~v~rv~~-~~~~~vlk~~~~~~~~~---~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~ 82 (263)
T d1j7la_ 7 PELKKLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGT---TYDVEREKDMMLWLEGKLPVPKVLHFERHD 82 (263)
T ss_dssp HHHHHHHTTSEEEECSCCCSSSEEEEEEC-SSCEEEEEEECGGGTTS---TTCHHHHHHHHHHHTTTSCCCCEEEEEEET
T ss_pred HHHHHhhhceEEEEcCCCCCCCcEEEEEe-CCCeEEEEEcCCCcccc---hhhHHHHHHHHHHHhccCCCCcEEEEEecC
Confidence 45666667777766655556678999875 56677888876543222 334667888877774 44467788888888
Q ss_pred CeeeEEEecccCCChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcCC----------------------------
Q 005864 474 RHSFLVYECLERGSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDCF---------------------------- 525 (673)
Q Consensus 474 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~~---------------------------- 525 (673)
+..++||++++|.++.+...... ....++.++++.++.||+...
T Consensus 83 ~~~~lv~~~l~G~~~~~~~~~~~--------~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (263)
T d1j7la_ 83 GWSNLLMSEADGVLCSEEYEDEQ--------SPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVD 154 (263)
T ss_dssp TEEEEEEECCSSEEHHHHTTTCS--------CHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCC
T ss_pred CceEEEEEecccccccccccccc--------cHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhh
Confidence 88999999999988876543211 123345566666777765321
Q ss_pred ----------------------------CCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 526 ----------------------------PPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 526 ----------------------------~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
+.++|+|+.|.||++++++.+.|+||+.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T d1j7la_ 155 CENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp GGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred hhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence 2378999999999999876677999998763
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.55 E-value=2.5e-09 Score=93.94 Aligned_cols=81 Identities=30% Similarity=0.226 Sum_probs=38.0
Q ss_pred ccccccEEEccCCcCccCC--chhhhcccCCCeEeecCCcCCCCCcccccCCCcccEEEecCccccccCc-------ccc
Q 005864 206 NLLKVHYLNLSNNQFRKEF--PVELEKLVQLSELDLSHNFLGGEIPPQICNLESLEKLNVSHNNLSGLIP-------SCF 276 (673)
Q Consensus 206 ~l~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-------~~~ 276 (673)
.+++|+.|+|++|+|+... +..+..+++|+.|+|++|.|+...+-.+....+|+.|++++|++..... ..+
T Consensus 63 ~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~~~i~ 142 (162)
T d1koha1 63 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYISAIR 142 (162)
T ss_dssp HCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHHHHHH
T ss_pred hCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHHHHHH
Confidence 3444444555555444322 2234445555555555555553222222233345555555555544322 224
Q ss_pred ccCCCccEEE
Q 005864 277 EGMHGLSCID 286 (673)
Q Consensus 277 ~~~~~L~~l~ 286 (673)
..+|+|+.||
T Consensus 143 ~~~P~L~~LD 152 (162)
T d1koha1 143 ERFPKLLRLD 152 (162)
T ss_dssp TTSTTCCEET
T ss_pred HHCCCCCEEC
Confidence 5566777664
|
| >d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: L domain-like family: mRNA export factor tap domain: mRNA export factor tap species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.55 E-value=3.3e-09 Score=93.14 Aligned_cols=89 Identities=26% Similarity=0.262 Sum_probs=57.7
Q ss_pred ccccCCCCCCEEEeCCCCCCCcC--CccccccccccEEEccCCcCccCCchhhhcccCCCeEeecCCcCCCCCcc-----
Q 005864 178 RVLGSLSELEYLDLSTNKLSGSI--PETLGNLLKVHYLNLSNNQFRKEFPVELEKLVQLSELDLSHNFLGGEIPP----- 250 (673)
Q Consensus 178 ~~l~~l~~L~~L~l~~n~l~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~----- 250 (673)
..+..+++|++|+|++|++++.. +..+..+++|+.|++++|.|+...+..+....+|+.|++++|++......
T Consensus 59 ~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~Npl~~~~~~~~~y~ 138 (162)
T d1koha1 59 IIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYI 138 (162)
T ss_dssp HHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTSTTSSSSSSHHHHH
T ss_pred HHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCCCcCcCcccchhHH
Confidence 33455677777777777776432 34456677788888888888765444444455788888888888754432
Q ss_pred --cccCCCcccEEEecCccc
Q 005864 251 --QICNLESLEKLNVSHNNL 268 (673)
Q Consensus 251 --~~~~l~~L~~L~l~~N~l 268 (673)
.+..+|+|+.|| ++.+
T Consensus 139 ~~i~~~~P~L~~LD--g~~v 156 (162)
T d1koha1 139 SAIRERFPKLLRLD--GHEL 156 (162)
T ss_dssp HHHHTTSTTCCEET--TEEC
T ss_pred HHHHHHCCCCCEEC--cCCC
Confidence 255678888775 5444
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=98.18 E-value=1.3e-06 Score=82.66 Aligned_cols=131 Identities=17% Similarity=0.130 Sum_probs=86.5
Q ss_pred eeccCCc-EEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC--CCcccceeeeeecCCeeeEEEecccC
Q 005864 409 CIGIGGQ-ASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR--HRNIVKFYGFCSHPRHSFLVYECLER 485 (673)
Q Consensus 409 ~ig~G~~-g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~~ 485 (673)
.+..|.. +.||+....+|..+++|...... ...+..|...++.+. .-.+.++++++.+++..++||+|++|
T Consensus 17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~------~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G 90 (255)
T d1nd4a_ 17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPG 90 (255)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSCT------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSS
T ss_pred EcCCcccCCeEEEEEeCCCCEEEEEeCCccC------HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeec
Confidence 4455554 68999998888889999865432 224566777777663 23366778888888889999999998
Q ss_pred CChHHHHhcCCCCccchHHHHHHHHHHHHHHHHHHhhcC-----------------------------------------
Q 005864 486 GSLAEILSNDGSIKEFSWIVRTNVIKSVANALSYMHHDC----------------------------------------- 524 (673)
Q Consensus 486 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~----------------------------------------- 524 (673)
.++.+.. .. ....+.++++.++-||+..
T Consensus 91 ~~~~~~~--------~~---~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (255)
T d1nd4a_ 91 QDLLSSH--------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPA 159 (255)
T ss_dssp EETTTSC--------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHH
T ss_pred ccccccc--------cc---HHHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHH
Confidence 6654310 00 0111223333333333211
Q ss_pred --------------CCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 525 --------------FPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 525 --------------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
.+.++|+|+.|.||+++++..+-|+||+.+..
T Consensus 160 ~~~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~~ 205 (255)
T d1nd4a_ 160 ELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 205 (255)
T ss_dssp HHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence 12479999999999999876678999998753
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.12 E-value=5.9e-07 Score=78.74 Aligned_cols=15 Identities=27% Similarity=0.459 Sum_probs=6.8
Q ss_pred CCCccEEEccCCccc
Q 005864 87 YPNLTFLDISHNNFY 101 (673)
Q Consensus 87 l~~L~~L~L~~n~i~ 101 (673)
.+.|++|+|++|.++
T Consensus 71 n~~L~~L~L~~n~i~ 85 (167)
T d1pgva_ 71 SPSLRVLNVESNFLT 85 (167)
T ss_dssp CSSCCEEECCSSBCC
T ss_pred cccccceeeehhhcc
Confidence 344444444444444
|
| >d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.03 E-value=1.1e-06 Score=77.07 Aligned_cols=111 Identities=13% Similarity=0.091 Sum_probs=80.5
Q ss_pred cCCCCCCEEEeeCC-ccccC----CCccccCCCCCCEEEcccCccccccC----ccccCCCCCcEEEccCccccccc---
Q 005864 13 GNFTNLKGLYLYSN-SLSGS----VPGEIGNLMQLTNLEIDNNQLFGQIP----RSLRNLASLNRVHLEQNHLTGNI--- 80 (673)
Q Consensus 13 ~~l~~L~~L~L~~n-~i~~~----~~~~~~~l~~L~~L~L~~n~i~~~~~----~~l~~l~~L~~L~L~~n~i~~~~--- 80 (673)
.+.+.|++|+|+++ .++.. +...+...++|++|+|++|.+..... ..+...+.|++|+|++|.|+...
T Consensus 12 ~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~ 91 (167)
T d1pgva_ 12 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLAR 91 (167)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHH
T ss_pred hCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHH
Confidence 45689999999974 57632 34457788999999999999985333 45566799999999999998543
Q ss_pred -ccccCCCCCccEEEccCCcccccc-------ccCccccCCCcEEEcccCc
Q 005864 81 -SEVFGIYPNLTFLDISHNNFYGEI-------WSSWGKCQQLGTLNFSMNN 123 (673)
Q Consensus 81 -~~~~~~l~~L~~L~L~~n~i~~~~-------~~~~~~l~~L~~L~L~~n~ 123 (673)
..++...++|++|+|++|.+.... ...+...++|+.|+++.+.
T Consensus 92 l~~aL~~n~sL~~L~l~~n~~~~~g~~~~~~l~~~L~~n~sL~~l~l~~~~ 142 (167)
T d1pgva_ 92 LLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 142 (167)
T ss_dssp HHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHhCCcCCEEECCCCcCCCccHHHHHHHHHHHHhCCCccEeeCcCCC
Confidence 346677888999999988655322 2233445677777776554
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.75 E-value=5.7e-05 Score=75.69 Aligned_cols=79 Identities=18% Similarity=0.052 Sum_probs=48.5
Q ss_pred cceeccCCcEEEEEEEeCC-CCEEEEEeeccchhh--h--hHHHHHHHHHHHHHhcc-CC--CcccceeeeeecCCeeeE
Q 005864 407 EQCIGIGGQASVYRGELPS-GEVVAVKKFHSLLLS--E--ISVQREFLNEIKALTEI-RH--RNIVKFYGFCSHPRHSFL 478 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~-~~~vavK~~~~~~~~--~--~~~~~~~~~e~~~l~~l-~h--~niv~l~~~~~~~~~~~l 478 (673)
.+.||.|....||++...+ |+.|+||.-...... + +....+...|.+.+..+ .+ ..+.+++.+ +++..++
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~l 108 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 108 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEE
Confidence 3568999999999998754 678999975432111 0 11123345677777766 22 345555554 3455679
Q ss_pred EEecccCCC
Q 005864 479 VYECLERGS 487 (673)
Q Consensus 479 v~e~~~~gs 487 (673)
|||++++..
T Consensus 109 vmE~L~~~~ 117 (392)
T d2pula1 109 VMEDLSHLK 117 (392)
T ss_dssp EECCCTTSE
T ss_pred EEeccCCcc
Confidence 999998754
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.68 E-value=2.4e-06 Score=74.76 Aligned_cols=40 Identities=10% Similarity=0.183 Sum_probs=16.9
Q ss_pred CCCCCcEEEccCcccccc----cccccCCCCCccEEEccCCccc
Q 005864 62 NLASLNRVHLEQNHLTGN----ISEVFGIYPNLTFLDISHNNFY 101 (673)
Q Consensus 62 ~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n~i~ 101 (673)
..++|++|+|++|.++.. ....+...++++.|++++|.+.
T Consensus 44 ~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~ 87 (166)
T d1io0a_ 44 TNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 87 (166)
T ss_dssp TCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred cCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhcccccc
Confidence 444444444444444422 1122333444444444444443
|
| >d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) superfamily: RNI-like family: 28-residue LRR domain: Tropomodulin C-terminal domain species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=97.61 E-value=2.9e-06 Score=74.22 Aligned_cols=118 Identities=13% Similarity=0.147 Sum_probs=83.4
Q ss_pred cCCCcccCCCCCCEEEeeC-CccccC----CCccccCCCCCCEEEcccCcccccc----CccccCCCCCcEEEccCcccc
Q 005864 7 AIPPSVGNFTNLKGLYLYS-NSLSGS----VPGEIGNLMQLTNLEIDNNQLFGQI----PRSLRNLASLNRVHLEQNHLT 77 (673)
Q Consensus 7 ~~p~~~~~l~~L~~L~L~~-n~i~~~----~~~~~~~l~~L~~L~L~~n~i~~~~----~~~l~~l~~L~~L~L~~n~i~ 77 (673)
++.....+.+.|++|+|++ +.|+.. +...+...++|++|+|++|.++... ...+...++|+.|++++|.++
T Consensus 8 ~l~~~~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~ 87 (166)
T d1io0a_ 8 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 87 (166)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhcccccc
Confidence 3444556789999999998 567632 3344668899999999999987543 345667899999999999998
Q ss_pred ccc----ccccCCCCCccEEEc--cCCcccccc----ccCccccCCCcEEEcccCcc
Q 005864 78 GNI----SEVFGIYPNLTFLDI--SHNNFYGEI----WSSWGKCQQLGTLNFSMNNI 124 (673)
Q Consensus 78 ~~~----~~~~~~l~~L~~L~L--~~n~i~~~~----~~~~~~l~~L~~L~L~~n~l 124 (673)
... ...+...++|+.++| ++|.+.... ...+...++|++|+++.+..
T Consensus 88 ~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~~~~~ 144 (166)
T d1io0a_ 88 GSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 144 (166)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred chhHHHHHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCcCCCC
Confidence 443 356677788887665 456675432 33344667778887766543
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=97.10 E-value=0.00066 Score=65.81 Aligned_cols=70 Identities=13% Similarity=0.140 Sum_probs=45.9
Q ss_pred CCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcc--ccee-----eeeecCCeeeEEEecccC
Q 005864 413 GGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNI--VKFY-----GFCSHPRHSFLVYECLER 485 (673)
Q Consensus 413 G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni--v~l~-----~~~~~~~~~~lv~e~~~~ 485 (673)
+.--.||+++.++|+.|++|+....... .+++..|...+..+....+ +..+ ..+...+..+.++++++|
T Consensus 33 s~EN~vy~v~~~dg~~~VlK~~rp~~~s----~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G 108 (325)
T d1zyla1 33 SYENRVYQFQDEDRRRFVVKFYRPERWT----ADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 108 (325)
T ss_dssp CSSSEEEEECCTTCCCEEEEEECTTTSC----HHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred cccceeEEEEcCCCCEEEEEEeCCCCCC----HHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCC
Confidence 4456899999999999999998654222 4556678888877742222 1111 122345667889999886
Q ss_pred C
Q 005864 486 G 486 (673)
Q Consensus 486 g 486 (673)
.
T Consensus 109 ~ 109 (325)
T d1zyla1 109 R 109 (325)
T ss_dssp E
T ss_pred c
Confidence 4
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.76 E-value=0.0025 Score=63.48 Aligned_cols=73 Identities=16% Similarity=0.144 Sum_probs=49.3
Q ss_pred cceeccCCcEEEEEEEeCC--------CCEEEEEeeccchhhhhHHHHHHHHHHHHHhccC-CCcccceeeeeecCCeee
Q 005864 407 EQCIGIGGQASVYRGELPS--------GEVVAVKKFHSLLLSEISVQREFLNEIKALTEIR-HRNIVKFYGFCSHPRHSF 477 (673)
Q Consensus 407 ~~~ig~G~~g~vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~ 477 (673)
++.|+.|-.-.+|++..++ .+.|.+++.-.. .. .....+|..+++.+. +.-..++++++.. .
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~--~~---~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g 117 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ET---ESHLVAESVIFTLLSERHLGPKLYGIFSG----G 117 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----E
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCc--ch---hhHHHHHHHHHHHHHhCCCCCeEEEEcCC----c
Confidence 3578999999999998654 346777765421 11 223457888888884 4444577787753 5
Q ss_pred EEEecccCCCh
Q 005864 478 LVYECLERGSL 488 (673)
Q Consensus 478 lv~e~~~~gsL 488 (673)
+|+||++|.++
T Consensus 118 ~I~efi~g~~l 128 (395)
T d1nw1a_ 118 RLEEYIPSRPL 128 (395)
T ss_dssp EEECCCCEEEC
T ss_pred eEEEEeccccC
Confidence 79999987544
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.50 E-value=0.021 Score=54.40 Aligned_cols=159 Identities=13% Similarity=0.090 Sum_probs=84.1
Q ss_pred ccHHHHHHHhcCCCccce-----eccCCcEEEEEEEeCCCCEEEEEeeccchhhhhHHHHHHHHHHHHHhccCCCcc--c
Q 005864 392 IVYEEIIRATKNFDAEQC-----IGIGGQASVYRGELPSGEVVAVKKFHSLLLSEISVQREFLNEIKALTEIRHRNI--V 464 (673)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~-----ig~G~~g~vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni--v 464 (673)
++.+|+.....+|.+++. |..|---+.|+....+| ++++|++.... + .+++..|++++..+...++ .
T Consensus 3 ls~~el~~~l~~Y~lg~~~~~~~i~~G~~N~ny~v~t~~g-~yVLri~~~~~--~---~~~l~~~~~~l~~L~~~g~pvp 76 (316)
T d2ppqa1 3 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--E---KNDLPFFLGLMQHLAAKGLSCP 76 (316)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCC
T ss_pred CCHHHHHHHHHhCCCCCceEeecCCCCcccCeEEEEECCC-cEEEEEcCCCC--C---HHHHHHHHHHHHhhhhcccccc
Confidence 466788888888988655 34677788999988665 48999875431 1 2334456666666642222 1
Q ss_pred cee----e--eeecCCeeeEEEecccCCChHH--------------HHhcC----C---CCcc-c---------------
Q 005864 465 KFY----G--FCSHPRHSFLVYECLERGSLAE--------------ILSND----G---SIKE-F--------------- 501 (673)
Q Consensus 465 ~l~----~--~~~~~~~~~lv~e~~~~gsL~~--------------~l~~~----~---~~~~-l--------------- 501 (673)
..+ | +....+....++.+..+..... .++.. . .... .
T Consensus 77 ~pi~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (316)
T d2ppqa1 77 LPLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERAD 156 (316)
T ss_dssp CBCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGG
T ss_pred ccceecCCCcceeeecccceeeeecccccccccchhHHHHHHHHHHhhhhhhhhcccccccccchhhcchhhhHHHHhhh
Confidence 111 1 1122345566676666542211 00000 0 0000 0
Q ss_pred -hHHHHHHHHHHHHHHHHHHhh-cCCCCeEEecCCCCCeEeCCCCceEEecccceee
Q 005864 502 -SWIVRTNVIKSVANALSYMHH-DCFPPIVHRDISSKNVLLSSEYEARVSDFGIAKF 556 (673)
Q Consensus 502 -~~~~~~~i~~~i~~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~~~~ 556 (673)
........+......+...+. ....++||+|+.+.||+++++...-|.||+.+..
T Consensus 157 ~~~~~~~~~l~~~~~~~~~~~~~~L~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~ 213 (316)
T d2ppqa1 157 EVEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 213 (316)
T ss_dssp GTSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hcchhHHHHHHHHHHhhhccCccccccccccCCcchhhhhcccccceeEeccccccc
Confidence 001111112222222222222 1224899999999999999887778999998863
|