Citrus Sinensis ID: 005868
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 673 | 2.2.26 [Sep-21-2011] | |||||||
| Q6R3K6 | 676 | Probable metal-nicotianam | yes | no | 0.995 | 0.991 | 0.821 | 0.0 | |
| Q6R3K8 | 670 | Probable metal-nicotianam | no | no | 0.994 | 0.998 | 0.780 | 0.0 | |
| Q7XRV2 | 678 | Probable metal-nicotianam | yes | no | 0.961 | 0.954 | 0.783 | 0.0 | |
| Q7XRV1 | 668 | Probable metal-nicotianam | no | no | 0.953 | 0.961 | 0.652 | 0.0 | |
| Q5JQD7 | 717 | Probable metal-nicotianam | no | no | 0.955 | 0.896 | 0.596 | 0.0 | |
| Q7XKF4 | 724 | Probable metal-nicotianam | no | no | 0.953 | 0.886 | 0.586 | 0.0 | |
| Q9SHY2 | 688 | Probable metal-nicotianam | no | no | 0.982 | 0.960 | 0.581 | 0.0 | |
| Q6H7J6 | 727 | Probable metal-nicotianam | no | no | 0.961 | 0.889 | 0.579 | 0.0 | |
| Q7X660 | 712 | Probable metal-nicotianam | no | no | 0.953 | 0.901 | 0.569 | 0.0 | |
| Q0J932 | 686 | Probable metal-nicotianam | no | no | 0.964 | 0.946 | 0.565 | 0.0 |
| >sp|Q6R3K6|YSL6_ARATH Probable metal-nicotianamine transporter YSL6 OS=Arabidopsis thaliana GN=YSL6 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 1151 bits (2978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/673 (82%), Positives = 615/673 (91%), Gaps = 3/673 (0%)
Query: 1 MGTEVEVSEPLIEKIAAVNDEEE--EADQPIPEWKDQITIRGLVASAIMGTLFCIITHKL 58
MGTE+ S + E + E+ ++ +PEWK+QITIRGL SA++GTLFCIITHKL
Sbjct: 1 MGTEIPRSAEISEALLPPESEKTVTATEEHVPEWKEQITIRGLTVSALLGTLFCIITHKL 60
Query: 59 NLTVGIIPSLNVAAGLLGFFLVKSWTSFLSKLGFSIKPFTRQENTVIQTCVVACYGLAFS 118
NLTVGIIPSLNVAAGLLGFF VKSWT FLSKLGF++KPFT+QENTVIQTCVVACYGLAFS
Sbjct: 61 NLTVGIIPSLNVAAGLLGFFFVKSWTGFLSKLGFTVKPFTKQENTVIQTCVVACYGLAFS 120
Query: 119 GGFGSSLLAMDERTYQLIGADYPGNRAEDVKNPGLGWMIGFVVVVSFLGLFSLVPLRKVM 178
GGFGS L+AMDE+TY+LIGADYPGN AEDV NPGL WMIGF+ VVSFLGLFSLVPLRKVM
Sbjct: 121 GGFGSYLIAMDEKTYKLIGADYPGNHAEDVINPGLWWMIGFLFVVSFLGLFSLVPLRKVM 180
Query: 179 ILDYKLTYPSGTATAMLINSFHTNTGAELAGKQVRCLGKYLSISFFWSCFKWFFSGVGNS 238
+LDYKLTYPSGTATAMLINSFHTNTGAELAG QV+CLGKYLS+S WSCFKWFFSG+G++
Sbjct: 181 VLDYKLTYPSGTATAMLINSFHTNTGAELAGNQVKCLGKYLSLSLIWSCFKWFFSGIGDA 240
Query: 239 CGFDNFPSFGLTLFKNTFYFDFSPTYVGCGLICPHIVNCSVLLGAIISWGFLWPFISQHA 298
CGFDNFP+ GLTLFKNTFYFDFSPTY+GCGLICPHIVNCSVLLGAIISWG LWPF+SQHA
Sbjct: 241 CGFDNFPTLGLTLFKNTFYFDFSPTYIGCGLICPHIVNCSVLLGAIISWGILWPFVSQHA 300
Query: 299 GDWYPADLGSNDFKGLYGYKVFIAISLILGDGLYNLIKIITITVKEMWNRSTKDSKLPFV 358
GDWYPADLGSNDFKGLYGYKVFIAI++ILGDGLYNL+KII +TVKE+ + ++ LP V
Sbjct: 301 GDWYPADLGSNDFKGLYGYKVFIAIAIILGDGLYNLVKIIAVTVKELCSSRSRRLNLPIV 360
Query: 359 ND-IQDTETSKLLLEQKEREIVFLKDGIPTWFAASGYVGLAAISTATIPTIFPPLKWYLV 417
D + D+E S++LL +K+R+ VFLKD IP FA +GYVGLAAISTATIP IFPPLKWY V
Sbjct: 361 TDGVDDSEASEILLVKKKRDEVFLKDRIPLEFAIAGYVGLAAISTATIPIIFPPLKWYFV 420
Query: 418 LCSYLIAPALAFCNSYGTGLTDWNLASTYGKIGLFIIASLVGTDGGVIAGLAACGVMMSI 477
LCSY IAPALAFCNSYGTGLTDW+LASTYGKIGLFIIAS+VG+DGGVIAGLAACGVMMSI
Sbjct: 421 LCSYFIAPALAFCNSYGTGLTDWSLASTYGKIGLFIIASVVGSDGGVIAGLAACGVMMSI 480
Query: 478 VSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAMGCVIAPLTFWMYWTAFDIGSPDGPYK 537
VSTAADLMQDFKTGYLTLSSAKSMFVSQL+GTAMGCVIAPLTFW++WTAFDIG P+GPYK
Sbjct: 481 VSTAADLMQDFKTGYLTLSSAKSMFVSQLVGTAMGCVIAPLTFWLFWTAFDIGDPNGPYK 540
Query: 538 APYAVIFREMAILGIEGFSELPKHCLALCCGFFVAALVINLLRDATPTKISRFIPVPMAM 597
APYAVIFREMAILGIEGF+ELPKHCLALC GFF+AAL++NLLRD TP KIS+FIP+PMAM
Sbjct: 541 APYAVIFREMAILGIEGFAELPKHCLALCYGFFIAALIVNLLRDITPPKISQFIPIPMAM 600
Query: 598 AVPFYIGAYFAIDMFVGTVILFIWELVNRKDSEDYAGAVASGLICGDGIWTIPSAILSIF 657
AVPFYIGAYFAIDMFVGTVILF+WE +NRKD+ED+AGAVASGLICGDGIWTIPSAILSI
Sbjct: 601 AVPFYIGAYFAIDMFVGTVILFVWERINRKDAEDFAGAVASGLICGDGIWTIPSAILSIL 660
Query: 658 RVNPPVCMYFGPA 670
R+NPP+CMYFGP+
Sbjct: 661 RINPPICMYFGPS 673
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May be involved in the transport of nicotianamine-chelated metals. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q6R3K8|YSL4_ARATH Probable metal-nicotianamine transporter YSL4 OS=Arabidopsis thaliana GN=YSL4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q7XRV2|YSL6_ORYSJ Probable metal-nicotianamine transporter YSL6 OS=Oryza sativa subsp. japonica GN=YSL6 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q7XRV1|YSL5_ORYSJ Probable metal-nicotianamine transporter YSL5 OS=Oryza sativa subsp. japonica GN=YSL5 PE=2 SV=3 | Back alignment and function description |
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| >sp|Q5JQD7|YSL12_ORYSJ Probable metal-nicotianamine transporter YSL12 OS=Oryza sativa subsp. japonica GN=YSL12 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q7XKF4|YSL13_ORYSJ Probable metal-nicotianamine transporter YSL13 OS=Oryza sativa subsp. japonica GN=YSL13 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9SHY2|YSL7_ARATH Probable metal-nicotianamine transporter YSL7 OS=Arabidopsis thaliana GN=YSL7 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6H7J6|YSL14_ORYSJ Probable metal-nicotianamine transporter YSL14 OS=Oryza sativa subsp. japonica GN=YSL14 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q7X660|YSL11_ORYSJ Probable metal-nicotianamine transporter YSL11 OS=Oryza sativa subsp. japonica GN=YSL11 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q0J932|YSL10_ORYSJ Probable metal-nicotianamine transporter YSL10 OS=Oryza sativa subsp. japonica GN=YSL10 PE=2 SV=2 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 673 | ||||||
| 359488466 | 675 | PREDICTED: probable metal-nicotianamine | 0.994 | 0.991 | 0.851 | 0.0 | |
| 224055759 | 669 | oligopeptide transporter OPT family [Pop | 0.989 | 0.995 | 0.848 | 0.0 | |
| 356561689 | 674 | PREDICTED: probable metal-nicotianamine | 0.997 | 0.995 | 0.828 | 0.0 | |
| 449460551 | 676 | PREDICTED: probable metal-nicotianamine | 0.997 | 0.992 | 0.826 | 0.0 | |
| 350285879 | 679 | yellow stripe-like protein 6 [Malus xiao | 0.992 | 0.983 | 0.827 | 0.0 | |
| 298571730 | 678 | yellow stripe-like protein 6.4 [Brassica | 0.995 | 0.988 | 0.823 | 0.0 | |
| 359488474 | 667 | PREDICTED: probable metal-nicotianamine | 0.982 | 0.991 | 0.845 | 0.0 | |
| 356561693 | 686 | PREDICTED: probable metal-nicotianamine | 0.997 | 0.978 | 0.813 | 0.0 | |
| 297818256 | 676 | hypothetical protein ARALYDRAFT_904909 [ | 0.995 | 0.991 | 0.821 | 0.0 | |
| 18405202 | 676 | putative metal-nicotianamine transporter | 0.995 | 0.991 | 0.821 | 0.0 |
| >gi|359488466|ref|XP_002274559.2| PREDICTED: probable metal-nicotianamine transporter YSL6-like isoform 1 [Vitis vinifera] gi|296082320|emb|CBI21325.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1173 bits (3034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 575/675 (85%), Positives = 628/675 (93%), Gaps = 6/675 (0%)
Query: 1 MGTE----VEVSEPLIEKIAAVNDEEEEADQPIPEWKDQITIRGLVASAIMGTLFCIITH 56
MGTE VE+SEPL+ V E E ++ IPEW+DQIT+RGLV SA+MG+LFCIITH
Sbjct: 1 MGTEQGAAVEISEPLLLDSGKV--REVELEERIPEWRDQITLRGLVVSAVMGSLFCIITH 58
Query: 57 KLNLTVGIIPSLNVAAGLLGFFLVKSWTSFLSKLGFSIKPFTRQENTVIQTCVVACYGLA 116
KLNLTVGIIPSLNVAAGLLGFF VKSWT FLS LGFS++PFTRQENTVIQTCVVACYGLA
Sbjct: 59 KLNLTVGIIPSLNVAAGLLGFFFVKSWTGFLSTLGFSVRPFTRQENTVIQTCVVACYGLA 118
Query: 117 FSGGFGSSLLAMDERTYQLIGADYPGNRAEDVKNPGLGWMIGFVVVVSFLGLFSLVPLRK 176
FSGGFGS LLAMDERTYQLIG DYPGNRAEDV NPGLGWMIGF+ VVSFLGLFSLVPLRK
Sbjct: 119 FSGGFGSYLLAMDERTYQLIGVDYPGNRAEDVLNPGLGWMIGFLFVVSFLGLFSLVPLRK 178
Query: 177 VMILDYKLTYPSGTATAMLINSFHTNTGAELAGKQVRCLGKYLSISFFWSCFKWFFSGVG 236
VM++DY+LTYPSGTATAMLINSFHTNTGAELAGKQV CLGKYL IS WSCFKWFFSG+G
Sbjct: 179 VMVMDYELTYPSGTATAMLINSFHTNTGAELAGKQVSCLGKYLGISLSWSCFKWFFSGIG 238
Query: 237 NSCGFDNFPSFGLTLFKNTFYFDFSPTYVGCGLICPHIVNCSVLLGAIISWGFLWPFISQ 296
+SCGFDNFPS GLTL+KNTFYFDFSPTYVGCGLICPHIVNCSVLLGAIISWGFLWPFISQ
Sbjct: 239 DSCGFDNFPSLGLTLYKNTFYFDFSPTYVGCGLICPHIVNCSVLLGAIISWGFLWPFISQ 298
Query: 297 HAGDWYPADLGSNDFKGLYGYKVFIAISLILGDGLYNLIKIITITVKEMWNRSTKDSKLP 356
HAGDWYPADLGSNDFKGLYGYKVFIAISLILGDGLYNLIKII+ITVKEMWN STK + LP
Sbjct: 299 HAGDWYPADLGSNDFKGLYGYKVFIAISLILGDGLYNLIKIISITVKEMWNSSTKQNNLP 358
Query: 357 FVNDIQDTETSKLLLEQKEREIVFLKDGIPTWFAASGYVGLAAISTATIPTIFPPLKWYL 416
+ ++ D+E+SKLL+++K+++ +FLKD IP+W AASGYVGLAAISTATIP +FP LKWYL
Sbjct: 359 IIKEVLDSESSKLLMQRKKQDEIFLKDQIPSWVAASGYVGLAAISTATIPVLFPALKWYL 418
Query: 417 VLCSYLIAPALAFCNSYGTGLTDWNLASTYGKIGLFIIASLVGTDGGVIAGLAACGVMMS 476
VL SY+IAPALAFCNSYGTGLTDW+LASTYGKIGLFIIAS+VG +GGV+AGL ACGVMMS
Sbjct: 419 VLSSYIIAPALAFCNSYGTGLTDWSLASTYGKIGLFIIASVVGGNGGVVAGLVACGVMMS 478
Query: 477 IVSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAMGCVIAPLTFWMYWTAFDIGSPDGPY 536
IVSTAADLMQDFKTGYLTLSSAKSMFVSQL+GTAMGCVIAPLTFW++WTAFDIGSPDGPY
Sbjct: 479 IVSTAADLMQDFKTGYLTLSSAKSMFVSQLIGTAMGCVIAPLTFWLFWTAFDIGSPDGPY 538
Query: 537 KAPYAVIFREMAILGIEGFSELPKHCLALCCGFFVAALVINLLRDATPTKISRFIPVPMA 596
KAPYAVIFREMAILG+EGFSELPKHCLA+CCGFFVAALVINLLRD TP K+S+FIP+PMA
Sbjct: 539 KAPYAVIFREMAILGVEGFSELPKHCLAICCGFFVAALVINLLRDVTPAKVSQFIPIPMA 598
Query: 597 MAVPFYIGAYFAIDMFVGTVILFIWELVNRKDSEDYAGAVASGLICGDGIWTIPSAILSI 656
MAVPFYIGAYFAIDMFVGTVILF+WE +NRK +ED+AGAVASGLICGDGIWTIPSA LSI
Sbjct: 599 MAVPFYIGAYFAIDMFVGTVILFVWERMNRKGAEDFAGAVASGLICGDGIWTIPSASLSI 658
Query: 657 FRVNPPVCMYFGPAV 671
FR+NPPVCMYFGP++
Sbjct: 659 FRINPPVCMYFGPSL 673
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224055759|ref|XP_002298639.1| oligopeptide transporter OPT family [Populus trichocarpa] gi|222845897|gb|EEE83444.1| oligopeptide transporter OPT family [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356561689|ref|XP_003549112.1| PREDICTED: probable metal-nicotianamine transporter YSL6-like isoform 1 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449460551|ref|XP_004148009.1| PREDICTED: probable metal-nicotianamine transporter YSL6-like [Cucumis sativus] gi|449501993|ref|XP_004161514.1| PREDICTED: probable metal-nicotianamine transporter YSL6-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|350285879|gb|AEQ28191.1| yellow stripe-like protein 6 [Malus xiaojinensis] | Back alignment and taxonomy information |
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| >gi|298571730|gb|ACL83357.2| yellow stripe-like protein 6.4 [Brassica juncea] | Back alignment and taxonomy information |
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| >gi|359488474|ref|XP_003633764.1| PREDICTED: probable metal-nicotianamine transporter YSL6-like isoform 5 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356561693|ref|XP_003549114.1| PREDICTED: probable metal-nicotianamine transporter YSL6-like isoform 3 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297818256|ref|XP_002877011.1| hypothetical protein ARALYDRAFT_904909 [Arabidopsis lyrata subsp. lyrata] gi|297322849|gb|EFH53270.1| hypothetical protein ARALYDRAFT_904909 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|18405202|ref|NP_566806.1| putative metal-nicotianamine transporter YSL6 [Arabidopsis thaliana] gi|160359042|sp|Q6R3K6.2|YSL6_ARATH RecName: Full=Probable metal-nicotianamine transporter YSL6; AltName: Full=Protein YELLOW STRIPE LIKE 6; Short=AtYSL6 gi|9279625|dbj|BAB01083.1| unnamed protein product [Arabidopsis thaliana] gi|332643734|gb|AEE77255.1| putative metal-nicotianamine transporter YSL6 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 673 | ||||||
| TAIR|locus:2091970 | 676 | YSL6 "AT3G27020" [Arabidopsis | 0.995 | 0.991 | 0.768 | 1.9e-289 | |
| TAIR|locus:2163036 | 670 | YSL4 "AT5G41000" [Arabidopsis | 0.994 | 0.998 | 0.730 | 1.3e-276 | |
| TAIR|locus:2018491 | 688 | YSL7 "AT1G65730" [Arabidopsis | 0.949 | 0.928 | 0.554 | 2.5e-193 | |
| TAIR|locus:2134956 | 673 | YSL1 "YELLOW STRIPE like 1" [A | 0.977 | 0.977 | 0.509 | 9.1e-187 | |
| TAIR|locus:2090502 | 714 | YSL5 "AT3G17650" [Arabidopsis | 0.967 | 0.911 | 0.522 | 9.1e-187 | |
| TAIR|locus:2168656 | 675 | YSL3 "YELLOW STRIPE like 3" [A | 0.977 | 0.974 | 0.5 | 1.2e-184 | |
| TAIR|locus:2007715 | 724 | YSL8 "AT1G48370" [Arabidopsis | 0.953 | 0.886 | 0.518 | 6.6e-184 | |
| TAIR|locus:2152896 | 664 | YSL2 "AT5G24380" [Arabidopsis | 0.962 | 0.975 | 0.497 | 2.2e-183 | |
| TAIR|locus:2163508 | 216 | AT5G45450 "AT5G45450" [Arabido | 0.294 | 0.916 | 0.556 | 1e-59 | |
| CGD|CAL0001509 | 718 | OPT8 [Candida albicans (taxid: | 0.404 | 0.378 | 0.269 | 3e-32 |
| TAIR|locus:2091970 YSL6 "AT3G27020" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2780 (983.7 bits), Expect = 1.9e-289, P = 1.9e-289
Identities = 517/673 (76%), Positives = 576/673 (85%)
Query: 1 MGTEVEVSEPLIEKIAAVNDEEE--EADQPIPEWKDQITIRGLVASAIMGTLFCIITHKL 58
MGTE+ S + E + E+ ++ +PEWK+QITIRGL SA++GTLFCIITHKL
Sbjct: 1 MGTEIPRSAEISEALLPPESEKTVTATEEHVPEWKEQITIRGLTVSALLGTLFCIITHKL 60
Query: 59 NLTVGIIPSLNVAAGLLGFFLVKSWTSFLSKLGFSIKPFTRQENTVIQTCVVACYXXXXX 118
NLTVGIIPSLNVAAGLLGFF VKSWT FLSKLGF++KPFT+QENTVIQTCVVACY
Sbjct: 61 NLTVGIIPSLNVAAGLLGFFFVKSWTGFLSKLGFTVKPFTKQENTVIQTCVVACYGLAFS 120
Query: 119 XXXXXXXXXMDERTYQLIGADYPGNRAEDVKNPGLGWMIXXXXXXXXXXXXXXXPLRKVM 178
MDE+TY+LIGADYPGN AEDV NPGL WMI PLRKVM
Sbjct: 121 GGFGSYLIAMDEKTYKLIGADYPGNHAEDVINPGLWWMIGFLFVVSFLGLFSLVPLRKVM 180
Query: 179 ILDYKLTYPSGTATAMLINSFHTNTGAELAGKQVRCLGKYLXXXXXXXXXXXXXXGVGNS 238
+LDYKLTYPSGTATAMLINSFHTNTGAELAG QV+CLGKYL G+G++
Sbjct: 181 VLDYKLTYPSGTATAMLINSFHTNTGAELAGNQVKCLGKYLSLSLIWSCFKWFFSGIGDA 240
Query: 239 CGFDNFPSFGLTLFKNTFYFDFSPTYVGCGLICPHIVNCSVLLGAIISWGFLWPFISQHA 298
CGFDNFP+ GLTLFKNTFYFDFSPTY+GCGLICPHIVNCSVLLGAIISWG LWPF+SQHA
Sbjct: 241 CGFDNFPTLGLTLFKNTFYFDFSPTYIGCGLICPHIVNCSVLLGAIISWGILWPFVSQHA 300
Query: 299 GDWYPADLGSNDFKGLYGYKVFIAISLILGDGLYNLIKIITITVKEMWNRSTKDSKLPFV 358
GDWYPADLGSNDFKGLYGYKVFIAI++ILGDGLYNL+KII +TVKE+ + ++ LP V
Sbjct: 301 GDWYPADLGSNDFKGLYGYKVFIAIAIILGDGLYNLVKIIAVTVKELCSSRSRRLNLPIV 360
Query: 359 ND-IQDTETSKLLLEQKEREIVFLKDGIPTWFAASGYVGLAAISTATIPTIFPPLKWYLV 417
D + D+E S++LL +K+R+ VFLKD IP FA +GYVGLAAISTATIP IFPPLKWY V
Sbjct: 361 TDGVDDSEASEILLVKKKRDEVFLKDRIPLEFAIAGYVGLAAISTATIPIIFPPLKWYFV 420
Query: 418 LCSYLIAPALAFCNSYGTGLTDWNLASTYGKIGLFIIASLVGTDGGVIAGLAACGVMMSI 477
LCSY IAPALAFCNSYGTGLTDW+LASTYGKIGLFIIAS+VG+DGGVIAGLAACGVMMSI
Sbjct: 421 LCSYFIAPALAFCNSYGTGLTDWSLASTYGKIGLFIIASVVGSDGGVIAGLAACGVMMSI 480
Query: 478 VSTAADLMQDFKTGYLTLSSAKSMFVSQLLGTAMGCVIAPLTFWMYWTAFDIGSPDGPYK 537
VSTAADLMQDFKTGYLTLSSAKSMFVSQL+GTAMGCVIAPLTFW++WTAFDIG P+GPYK
Sbjct: 481 VSTAADLMQDFKTGYLTLSSAKSMFVSQLVGTAMGCVIAPLTFWLFWTAFDIGDPNGPYK 540
Query: 538 APYAVIFREMAILGIEGFSELPKHCLALCCGFFVAALVINLLRDATPTKISRFIPVPMAM 597
APYAVIFREMAILGIEGF+ELPKHCLALC GFF+AAL++NLLRD TP KIS+FIP+PMAM
Sbjct: 541 APYAVIFREMAILGIEGFAELPKHCLALCYGFFIAALIVNLLRDITPPKISQFIPIPMAM 600
Query: 598 AVPFYIGAYFAIDMFVGTVILFIWELVNRKDSEDYAGAVASGLICGDGIWTIPSAILSIF 657
AVPFYIGAYFAIDMFVGTVILF+WE +NRKD+ED+AGAVASGLICGDGIWTIPSAILSI
Sbjct: 601 AVPFYIGAYFAIDMFVGTVILFVWERINRKDAEDFAGAVASGLICGDGIWTIPSAILSIL 660
Query: 658 RVNPPVCMYFGPA 670
R+NPP+CMYFGP+
Sbjct: 661 RINPPICMYFGPS 673
|
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| TAIR|locus:2163036 YSL4 "AT5G41000" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2018491 YSL7 "AT1G65730" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2134956 YSL1 "YELLOW STRIPE like 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2090502 YSL5 "AT3G17650" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2168656 YSL3 "YELLOW STRIPE like 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2007715 YSL8 "AT1G48370" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2152896 YSL2 "AT5G24380" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2163508 AT5G45450 "AT5G45450" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| CGD|CAL0001509 OPT8 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q6R3K6 | YSL6_ARATH | No assigned EC number | 0.8216 | 0.9955 | 0.9911 | yes | no |
| Q6R3K8 | YSL4_ARATH | No assigned EC number | 0.7809 | 0.9940 | 0.9985 | no | no |
| Q7XRV2 | YSL6_ORYSJ | No assigned EC number | 0.7836 | 0.9613 | 0.9542 | yes | no |
| Q9AY27 | YS1_MAIZE | No assigned EC number | 0.5238 | 0.9806 | 0.9677 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | estExt_Genewise1_v1.C_LG_I3156 | oligopeptide transporter OPT family (670 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 673 | |||
| pfam03169 | 619 | pfam03169, OPT, OPT oligopeptide transporter prote | 1e-127 | |
| TIGR00728 | 606 | TIGR00728, OPT_sfam, oligopeptide transporter, OPT | 4e-87 | |
| COG1297 | 624 | COG1297, COG1297, Predicted membrane protein [Func | 2e-22 | |
| TIGR00733 | 591 | TIGR00733, TIGR00733, putative oligopeptide transp | 2e-07 |
| >gnl|CDD|217401 pfam03169, OPT, OPT oligopeptide transporter protein | Back alignment and domain information |
|---|
Score = 390 bits (1003), Expect = e-127
Identities = 163/647 (25%), Positives = 268/647 (41%), Gaps = 56/647 (8%)
Query: 35 QITIRGLVASAIMGTLFCIITHKLNLTVGIIPSLNVAAGLLGFFLVKSWTSFLSKLGFSI 94
++T R +V ++ L + L G + ++ A LL + L K+ L + FS+
Sbjct: 1 ELTFRAVVLGILLAILGAAVNMYFGLKTGSVSISSIPAALLAYPLGKALARILGGIRFSL 60
Query: 95 --KPFTRQENTVIQTCVVACYGLAFSGGFGSSLLAMDERTYQLIGADYPGNRAEDVKNPG 152
PFT +EN +IQT A A++GGF L A+ ++
Sbjct: 61 NPGPFTIKENNLIQTMASAGASTAYAGGFIFVLPALLFY----------------GQSFS 104
Query: 153 LGWMIGFVVVVSFLGLFSLVPLRKVMILDYKLTYPSGTATAMLINSFHTNTGAELAGKQV 212
G+ I ++ LG+ PLR+ ++ KL +PSG ATA L+ + HT G + A ++
Sbjct: 105 FGYAILLLLSTQLLGVGFAGPLRRFLVYPPKLPFPSGLATAELLKALHTPGGWKEAKSRL 164
Query: 213 RCLGKYLSISF--FWSCFKWFFSGVGNS---CGFDNFPSFGLTLFKNTFYFDFSPTYVGC 267
+ SF +W F F + S + P+FGL F FD+S +G
Sbjct: 165 KFFLIGFVASFVYYWFPFYIFPALSSFSWVCWIAPSNPTFGLLFGGLGFTFDWSAILLGS 224
Query: 268 GLICPHIVNCSVLLGAIISWGFLWPFISQHAGDWYPADLGSND---------FKGLYGYK 318
GLI P V ++L+GA++SWG + P + WY A L GL Y
Sbjct: 225 GLIVPLWVAVNMLIGAVLSWGIIIPLLYYSGNVWYTAYLPIMSNGLFDNTGTSDGLLDYA 284
Query: 319 VFIAISLILGDGLYNLIKIITITVKEMWN--RSTKDSKLPFVNDIQDTETSKLLLEQKER 376
+I +L GLY L+ IT + + +D ++ + R
Sbjct: 285 RYIGYGPMLLSGLYALLFFAAITATIVHSILFHGRDIWQALKASRGPKKS----YDDPHR 340
Query: 377 EIVFLKDGIPTWFAASGYVGLAAISTATIPTIFP-PLKWYLVLCSYLIAPALAFCNSYGT 435
++ +P W+ +G V + A + +FP L + +L + L+A A ++Y
Sbjct: 341 RLMRKYKEVPMWWYLAGLVLSLVLGIALVAALFPTQLPVWGLLLALLLAFVFAIPSAYIA 400
Query: 436 GLTDWNLASTYGKIGLFIIASLVGTDGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTL 495
GLT + S G + I ++ G +A L GV + + A D MQD KTG+ T
Sbjct: 401 GLTGSSPVSGLGILTELIAGYVLP--GRPLANLIFGGVGYNAAAQAGDFMQDLKTGHYTG 458
Query: 496 SSAKSMFVSQLLGTAMGCVIAPLTFWMYWTAFDIGSPDGP---YKAPYAVIFREMAILGI 552
+ ++ FV+QL+GT +G V+ P + A+ G AP A +A I
Sbjct: 459 APPRAQFVAQLIGTLVGSVVNPGVLNLLNQAYGCTGAQGDSWTCPAPQAFFSAAVAWGVI 518
Query: 553 EGF-SELPKHCLALCCGFFVAALVINLLRDATPTKISRFIPVPMAMA----VPFYIGAYF 607
G LP + L A V++ L + +P +A A + Y+
Sbjct: 519 GGKRFGLPYYALLWGFLVGAVAPVLDWLL-------HKRLPRSLAFAGAGTIGPYLPPSL 571
Query: 608 AIDMFVGTVILFIWELVNRKDSEDYAGAVASGLICGDGIWTIPSAIL 654
+ VG + + + Y +A+GLI G+ + + A L
Sbjct: 572 TSAILVGGLFNYYVRRRRKAWWRKYNYVLAAGLIAGEALMGVIIAFL 618
|
The OPT family of oligopeptide transporters is distinct from the ABC pfam00005 and PTR pfam00854 transporter families. OPT transporters were first recognised in fungi (Candida albicans and Schizosaccharomyces pombe), but this alignment also includes orthologues from Arabidopsis thaliana. OPT transporters are thought to have 12-14 transmembrane domains and contain the following motif: SPYxEVRxxVxxxDDP. Length = 619 |
| >gnl|CDD|233105 TIGR00728, OPT_sfam, oligopeptide transporter, OPT superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|224216 COG1297, COG1297, Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|129816 TIGR00733, TIGR00733, putative oligopeptide transporter, OPT family | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 673 | |||
| KOG2262 | 761 | consensus Sexual differentiation process protein I | 100.0 | |
| TIGR00727 | 681 | ISP4_OPT small oligopeptide transporter, OPT famil | 100.0 | |
| TIGR00728 | 654 | OPT_sfam oligopeptide transporters, OPT superfamil | 100.0 | |
| PF03169 | 624 | OPT: OPT oligopeptide transporter protein; InterPr | 100.0 | |
| TIGR00733 | 591 | putative oligopeptide transporter, OPT family. Thi | 100.0 | |
| COG1297 | 624 | Predicted membrane protein [Function unknown] | 100.0 | |
| TIGR00733 | 591 | putative oligopeptide transporter, OPT family. Thi | 93.18 | |
| PF03169 | 624 | OPT: OPT oligopeptide transporter protein; InterPr | 88.15 |
| >KOG2262 consensus Sexual differentiation process protein ISP4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-126 Score=1027.98 Aligned_cols=601 Identities=18% Similarity=0.257 Sum_probs=539.5
Q ss_pred hhhhccCCCCC-----------CCCcchHHHHHHHHHHHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHHHHhhhc
Q 005868 21 EEEEADQPIPE-----------WKDQITIRGLVASAIMGTLFCIITHKLNLTVGIIPSLNVAAGLLGFFLVKSWTSFLSK 89 (673)
Q Consensus 21 ~~~~~~~~~~~-----------~~~~lT~Ra~~lG~~l~~l~a~~n~~~~lr~g~~~~~si~~~lls~~lg~~~~~~lp~ 89 (673)
+|||||+|+|| +.|++|||+|++|++.+++++++||+|++|+-...-..+.+|++.+|+||+|+|.||+
T Consensus 45 ~ed~~~spv~EVrl~Vp~tDDptlPv~TfRmW~Lg~~~~iv~a~vNqFF~~R~~~lsis~i~aQi~~~PlGklma~~lP~ 124 (761)
T KOG2262|consen 45 LEDEEDSPVPEVRLTVPPTDDPTLPVLTFRMWFLGLISCIVLAFVNQFFSYRYPPLSISAIVAQIATYPLGKLMAKTLPT 124 (761)
T ss_pred ccccccCcchhheeecCCCCCCCchhHhHHHHHHHHHHHHHHHHHhhhhcccCCCeehHHHHHHHHHHhHHHHHHHhCCc
Confidence 46777788764 7799999999999999999999999999998322224578999999999999999998
Q ss_pred c----------CCCCCCCCccchhhhhhhhhhccccccccchhhhHhHhhHHHHhhhcCCCCCCCCCCCCCCchhHHHHH
Q 005868 90 L----------GFSIKPFTRQENTVIQTCVVACYGLAFSGGFGSSLLAMDERTYQLIGADYPGNRAEDVKNPGLGWMIGF 159 (673)
Q Consensus 90 ~----------~lnpgpf~~kE~~iiq~~Asa~~~~~~~~~~~~~i~a~~~l~y~~~g~~~~~~~~~~~~~~~~~~~~~~ 159 (673)
+ ++||||||.|||++++++|+++++ ++|++.|+..+++||++ +.++++++++
T Consensus 125 ~~~~~~~~~~fslNPGPFn~KEHvlitIfan~~sg----~aYat~Ii~~~k~fY~~--------------~l~f~~~~ll 186 (761)
T KOG2262|consen 125 WKFGLGGRWSFSLNPGPFNVKEHVLITIFANIGSG----TAYATHIITAQKAFYKR--------------NLSFGYAFLL 186 (761)
T ss_pred eeeecCcceEEEeCCCCCcchheeeeehhhhccCc----chhhhHHHHHHHHHHhc--------------cccHHHHHHH
Confidence 3 489999999999999999999654 46899999999999997 4578899999
Q ss_pred HHHHHHhhhhhhhhcccceeecCcCcCcchhhHHHHHHhhccCCccccc-hhhHHHHHHHHHHHHHHHHH----------
Q 005868 160 VVVVSFLGLFSLVPLRKVMILDYKLTYPSGTATAMLINSFHTNTGAELA-GKQVRCLGKYLSISFFWSCF---------- 228 (673)
Q Consensus 160 ~l~~~llG~~~A~~lRr~lV~~~~l~~P~~la~a~l~~slh~~~~~~~~-~~r~~~f~~~f~~~fi~~~~---------- 228 (673)
++++|++|+++||++||++|+|++|.||+.|++++|+|+||++|+.+.+ ++|+|||+++|.++|+||||
T Consensus 187 ~lttQ~lGyGwAGl~Rk~lV~Pa~m~WPsnLvqvsLFraLHeke~~~~g~msR~rFF~ivfv~SFiyY~fPgylF~~Ls~ 266 (761)
T KOG2262|consen 187 VLTTQLLGYGWAGLFRKYLVYPASMWWPSNLVQVSLFRALHEKENKSKGNMSRYRFFLIVFVASFIYYWFPGYLFPILSS 266 (761)
T ss_pred HHHHHHhcccHhhhhHhhccCcHhhcCcchhHHHHHHHHHHhhhhhcccCccchhhhhHHHHHHHHHHHhhHHHHHHHhh
Confidence 9999999999999999999999999999999999999999997654433 78999999999999999997
Q ss_pred ----Hhhhcc-ccccccccccccccccccCcceeeeccc--ccccccccccHHHHHHHHHHHHHHHHHHHHHHhhccCCc
Q 005868 229 ----KWFFSG-VGNSCGFDNFPSFGLTLFKNTFYFDFSP--TYVGCGLICPHIVNCSVLLGAIISWGFLWPFISQHAGDW 301 (673)
Q Consensus 229 ----~wi~p~-~~~~~~~~~~~glGl~~~~~~~t~Dws~--~~~G~gll~p~~~~~~~~~G~vl~~~il~P~l~~~~n~~ 301 (673)
||+.|. ...++++++..|+|+.| +||||++ +|+|+|+.+|+++.+|+++|.++..+|+.|++|| +|.|
T Consensus 267 ~swvcW~~P~s~~~~qi~sg~~GLGi~~----~tlDW~~IssylgSPLasP~~a~~n~~~gfvl~~~IV~Pi~Y~-~n~~ 341 (761)
T KOG2262|consen 267 FSWVCWIWPSSITANQIGSGLTGLGIGP----FTLDWSQISSYLGSPLASPFFAIANVFLGFVLFIYIVLPILYW-TNTY 341 (761)
T ss_pred hheeeEeccccHHHHHhccccccccccc----ccccHHHHHHHcCCcchhhHHHHHHHhhhhhhhhhhhhhhHhh-ccce
Confidence 788886 45677889999999998 9999999 4899999999999999999999999999999998 6999
Q ss_pred CCCCCCCCCccccc---------------------hhh----hhHHHH--HHHhhHHHHHHHHHHHHH----HHHHHHhh
Q 005868 302 YPADLGSNDFKGLY---------------------GYK----VFIAIS--LILGDGLYNLIKIITITV----KEMWNRST 350 (673)
Q Consensus 302 ~~~~~p~~s~~~~~---------------------~~~----~~~~~~--~~~~~g~~~l~~~i~~~~----~~~~~~~~ 350 (673)
+++++|+.|++.|| +|+ +|+++. +.++.++..+++.+.|.+ |++|++.|
T Consensus 342 ~a~~fPI~Ss~lf~~tG~sYnvt~Il~~~f~ld~~~Y~~ysp~yls~~falsygl~faa~~a~i~Hv~Lf~gkdiw~~~~ 421 (761)
T KOG2262|consen 342 DAKYFPIFSSSLFDHTGNSYNVTKILDSKFELDLDKYQEYSPLYLSTFFALSYGLGFAALSATIVHVALFNGKDIWQQTK 421 (761)
T ss_pred ecceeceecCcceecCCcEeceeeeecCccccchHHHhhcCCcceeHHHHHHHHHHHHHHHHHhhhheeeccHHHHHHHH
Confidence 99999998876554 343 677775 445556888888888864 78888877
Q ss_pred cCCCCCCcccccchhhhhhhhhhhhhhhhhccCCCchHHHHHHHHHHHHHHHhhcccccC--CchHHHHHHHHHHHHHHH
Q 005868 351 KDSKLPFVNDIQDTETSKLLLEQKEREIVFLKDGIPTWFAASGYVGLAAISTATIPTIFP--PLKWYLVLCSYLIAPALA 428 (673)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~d~~~r~~~~~y~~vP~ww~~~~lvv~~~~~~~~~~~~~~--~lp~w~~llai~l~~i~~ 428 (673)
+.. ++.+|.|++.|++|||||+|||.+.+++++++++++++++.+ |+|||++++|+++++++.
T Consensus 422 ~~~---------------~k~~DiHtrlMkkYKeVP~WWf~~ili~s~~l~~~~~~~~~~~~q~PwWg~~va~~ia~vf~ 486 (761)
T KOG2262|consen 422 KAF---------------NKKMDIHTRLMKKYKEVPDWWFLAILIVSLGLGLAACEGYKTQVQLPWWGLLVACAIAFVFT 486 (761)
T ss_pred hcc---------------ccCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHhhheeeecccccCchHHHHHHHHHHHHHh
Confidence 664 344566777799999999999999999999999999999988 899999999999999999
Q ss_pred HhhhhhhhccccccccchhhHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccCCchHHHHHHHHH
Q 005868 429 FCNSYGTGLTDWNLASTYGKIGLFIIASLV-GTDGGVIAGLAACGVMMSIVSTAADLMQDFKTGYLTLSSAKSMFVSQLL 507 (673)
Q Consensus 429 ~~~~~~~g~T~~~~~~~l~~l~qli~g~~~-G~p~~~~anl~~~~~~~~~~~qa~~~~~DlK~G~y~~~pPr~~f~~Q~i 507 (673)
+|.+.+.|+||++|+ +|+++|+|.||+. ||| +|||.||.|++.++.||..++||+|+|||||+|||.||.+|++
T Consensus 487 iPigii~AtTNq~~G--LNiitE~i~Gy~~PgrP---iAn~~FK~yGyism~Qal~f~~DlKlghYMKIPPR~mF~~Q~v 561 (761)
T KOG2262|consen 487 IPIGIIQATTNQTPG--LNIITEYIIGYIYPGRP---IANLCFKTYGYISMTQALTFLQDLKLGHYMKIPPRSMFAVQLV 561 (761)
T ss_pred ccHHHhhhhccCCcc--HHHHHHHHHHhhcCCch---HHHHHHHHhchhhHHHHHHHHhhccceeeecCChHHHHHHHHH
Confidence 999999999999999 9999999999999 999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHHHhhcccCCC--CCCCCCCchHHHHHHHHHH-hhcCCCCCchh---hHHHHHHHHHHHH---HHH
Q 005868 508 GTAMGCVIAPLT-FWMYWTAFDIGS--PDGPYKAPYAVIFREMAIL-GIEGFSELPKH---CLALCCGFFVAAL---VIN 577 (673)
Q Consensus 508 G~ivg~~v~~~v-~~ll~~~~~i~~--p~~~~~~P~a~~~~~~s~~-g~~G~~~l~~~---y~~l~~~~~igai---i~~ 577 (673)
||+++++|+.+| .|++.+++++|+ |++.||||..++++++|++ |++||+|+|++ |..+.|+|++|++ ++|
T Consensus 562 ~tivs~~Vn~gv~~W~m~~I~~iC~~~~~s~~TCP~~rvffnASvIWGlIGP~riF~~~g~Y~~l~wFFLiGa~~pv~vw 641 (761)
T KOG2262|consen 562 GTIVAGFVNLGVAWWLMYSIPNICTTDQNSPWTCPSDRVFFNASVIWGLIGPKRIFGSLGIYPGLNWFFLIGALAPVLVW 641 (761)
T ss_pred HHHhheeeeHHhHHHHHhcccccccCCCCCCccCCCCceEEeceeeeecccchhhcCCCCccCcchHHHHHHHHhhHHHH
Confidence 999999999999 899999999997 4689999999999999999 99999999963 9999999999998 689
Q ss_pred HHHhhcCcc-cccccccccccccccccchhhHHHHHHHHHHH----HHHHHhccccccchhhhhhhhHHhhhHhHHHHHH
Q 005868 578 LLRDATPTK-ISRFIPVPMAMAVPFYIGAYFAIDMFVGTVIL----FIWELVNRKDSEDYAGAVASGLICGDGIWTIPSA 652 (673)
Q Consensus 578 ll~~~~p~~-~~~~i~~pv~~~~~~~lp~~~~~~~~~G~~i~----~~~~r~~~~~~~~y~~~laaGL~aG~ai~gvi~a 652 (673)
+++|++|++ |.+.+|.|+.++....+||++..++..|.+++ ++++||++.||+||||+++||||||.++++++++
T Consensus 642 ~~~k~fPk~~w~~~i~~pvl~gg~~~mPpat~vny~sw~iv~fifny~i~r~~~~WW~kYNyvLsaaldaG~a~~~vlif 721 (761)
T KOG2262|consen 642 LLQKKFPKKKWIKQINPPVLFGGTANMPPATAVNYTSWAIVGFIFNYYIFRYRRSWWQKYNYVLSAALDAGVAFMGVLIF 721 (761)
T ss_pred HHHHhcchhhhhhccCcceEecccccCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhhcccchhHHHhHhh
Confidence 999999976 57779999999999999998766666555554 6689999999999999999999999999999999
Q ss_pred H-HHHcCCCCCcce
Q 005868 653 I-LSIFRVNPPVCM 665 (673)
Q Consensus 653 ~-l~~~gv~~~~~~ 665 (673)
+ ++..|++.+ ||
T Consensus 722 fcv~~~~~~~~-WW 734 (761)
T KOG2262|consen 722 FCVQYPGISLN-WW 734 (761)
T ss_pred heeccCCCccc-cc
Confidence 7 888888775 44
|
|
| >TIGR00727 ISP4_OPT small oligopeptide transporter, OPT family | Back alignment and domain information |
|---|
| >TIGR00728 OPT_sfam oligopeptide transporters, OPT superfamily | Back alignment and domain information |
|---|
| >PF03169 OPT: OPT oligopeptide transporter protein; InterPro: IPR004813 The transporter OPT family are transporters of small oligopeptides, demonstrated experimentally in three different species of yeast | Back alignment and domain information |
|---|
| >TIGR00733 putative oligopeptide transporter, OPT family | Back alignment and domain information |
|---|
| >COG1297 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR00733 putative oligopeptide transporter, OPT family | Back alignment and domain information |
|---|
| >PF03169 OPT: OPT oligopeptide transporter protein; InterPro: IPR004813 The transporter OPT family are transporters of small oligopeptides, demonstrated experimentally in three different species of yeast | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 673 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.8 bits (105), Expect = 8e-05
Identities = 71/513 (13%), Positives = 138/513 (26%), Gaps = 159/513 (30%)
Query: 81 KSWTSFLSKLGFSIKPF-----TRQEN-TVIQTCV--------VACYGLAFSGGFGSSLL 126
+ + +L + F +R + ++ + V G+ G G + +
Sbjct: 110 RMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGV---LGSGKTWV 166
Query: 127 AMDERTYQLIGADYPGNRAEDVKNPGLGWM-IGFVVVVSFLGLFSLVPLRKVMILDYKLT 185
A+D Y + + + + W+ + + L L L + ++
Sbjct: 167 ALD--VCL----SY---KVQCKMDFKIFWLNLKNCNSPETV-LEMLQKLLYQIDPNWTSR 216
Query: 186 YPSGTATAMLINSFHTNTGAELAGKQ-VRCLGKYLSISFFWS--CFKWF----------- 231
+ + I+S L K CL L + + + F
Sbjct: 217 SDHSSNIKLRIHSIQAELRRLLKSKPYENCL---LVLLNVQNAKAWNAFNLSCKILLTTR 273
Query: 232 FSGVGNSCGFDNFPSFGLTLFKNTFYFD-----FSPTYVGCGLIC-PH-IVNCSVLLGAI 284
F V + L T D Y+ C P ++ + +I
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL-KYLDCRPQDLPREVLTTNPRRLSI 332
Query: 285 ISWGFLWPFISQHAGDW-----YPAD------------LGSNDFKGLYGY-KVF-----I 321
I I W D L +++ ++ VF I
Sbjct: 333 I-----AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI 387
Query: 322 ---AISLILGDGLYNLIKIITITVKEMWNRS--TKDSKLP--FVNDIQDTETSKLLLE-Q 373
+SLI D + + + ++ V ++ S K K + I KL E
Sbjct: 388 PTILLSLIWFDVIKSDVMVV---VNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYA 444
Query: 374 KEREIV--------FLKDGIPT------WFAASGYVG--LAAISTATIPTIFPPLKWYLV 417
R IV F D + +++ ++G L I T+F +L
Sbjct: 445 LHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS---HIGHHLKNIEHPERMTLFR--MVFL- 498
Query: 418 LCSYLIAPALAFCNSYGTGLTDWNLASTYGKIGLFIIASLVGTDGGVIAGLAACGVMMSI 477
D+ F+ + A
Sbjct: 499 ---------------------DFR----------FLEQKIRHD------STAWNA----- 516
Query: 478 VSTAADLMQDFKT--GYLTLSSAK-SMFVSQLL 507
+ + +Q K Y+ + K V+ +L
Sbjct: 517 SGSILNTLQQLKFYKPYICDNDPKYERLVNAIL 549
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00