Citrus Sinensis ID: 005872

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670--
MAAAPSQTILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLKVKQPKEEYSP
cccccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHccccccccEEEEEEEcccccHHHHHHHHccccccccccEEEEEEEEccEEEEEEEEccccEEEEEEEccccccccccHHHHHHHHHHHcccHHHHHHHHHHccccccEEEEccccccccccccccccccEEEEEEEEEEEcccccccccccccEEEEEccccEEEEEEcccccccccccccccccccccccccccccccEEEcccccEEEEEccEEEEccEEEEEEEEcccccEEEEEEEEEccccccEEEEEEEEEEEEEEEcccccHHHHHHHEEcccccccccccccccccccccccEEEEEEEEEccccccEEEccEEEEEEEEccccEEEEEEEcccccEEEEEEEEEEEEEEEEEEEEccccEEEEEEEEcccEEEEEEEEEEEEEEEEEEcccccccccccccEEccccccccccEEEEEEEEccccccccEEEEEEEEEEEcccccccccEEEEEEEEEEccHHHHHHHccccccEEEEEcccccccccccEEEEEEcccccccccccccHHHHccccccccEEEEEcccccccccccccccccccccHHHHcccccccccccEEEEEEEcccccccccccccccccEEEEEEEcccccccccccccccccccccc
cccccHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHcccccccccEEEEEEEEccccHHHHHHHHHcHHHcccccEEEEEEEEccEEEEEEEEccccEEEEEEEcccccEccccHHHHHHHccHHHHcHHHHHHHHHccccHHHEEEEEEcccccccccccccccccEEEEEEEEccccccHHHcEcccEEEEEEccccEEEEEEEcccccccccccccccHHHcccccccccccEEEEccccccEEEEccEEEEccEEEEEEEEcccEEEEEEEEEEEccccEEEEEEEEEEEEEEEEEEccccccccccEEcHHHHHcccccEccccEcccEccccEEEEEEEEcccccEEEEEEEEEEEEEEEEEEEEEEEEcccccccEEEEEEEEEEEEEEEEEEccEEEEEEEEEcccccEEEEEEEEEcccEEEcccccHHHccccccEEEEEccEEEEcEEEEEEEEEEEcccccEEEEEEEEEEEEEcccccccccEEEEEEEEEccEHHHHcEccccccEEEEEEEEEEEcccccEEEEEEEcccccccccccccHHHHHcHHHHccEEEEEcccccccccccccEcccccccHHHHHHHccEcccEEEEEEEEEEEEEcccHHHccccccEEEEcEEEEccccccccccccccccEcccc
MAAAPSQTILFIILLHIFYIfvpshqyhpldsltpsefSQIRSIVTkaypessthkltfqyvgleepskQTVISWLknetttnpprqAFVIARIDHQTHELIVDLSLQEIASKRiysgygypmftfedqenadklaftyppfVASIRRRGLKLEEVVCESfsvgwygaeeeegknkKRIVKVMCYYMNgtvnlfmrpiegismtvdldemkiigfqdrvtvpvpkadetefreskikppfrqsLKAITvvqpdgpsftidghmirWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFfdageygyglcsmtleplrdcppnavfmdayfskqdgmprkipKAFCIFERYAGDImwrhteatipgktvreVRQDVSLVVRTVStfgnydyvndwefkqsgsIKVTVGLTGMvqvrgttythkdhmeedvygTLVAENSIAIHHDHFLTYrldldvdgdansFVRSKLrttrvndrrssrksywtvdsktaktesdariklgsepaellfvnpnkktkmgnligyrlipegvtgallssddhpqirAAFTNYNVWVTAYNksekwagglyadqshgddtLAVWSNRNRSIENKDIVLWYTLgfhhvpyqedfpvmptlnggfelrpsnffesnpvlkvkqpkeeysp
MAAAPSQTILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTkaypesstHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESfsvgwygaeeeegknkkriVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIgfqdrvtvpvpkadetefreskikppfrqslkaitvvqpdgpsFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYfskqdgmprKIPKAFCIFERYAGDIMWRHTeatipgktvrevrqdVSLVVRTvstfgnydyvndwefKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDAnsfvrsklrttrvndrrssrksywtvdsktaktesdariklgsepaellfvnpnkktkmgNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELrpsnffesnpvlkvkqpkeeysp
MAAAPSQTilfiillhifyifVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLKVKQPKEEYSP
*******TILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWY***********RIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPV*******************SLKAITVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVR******************************************LLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNF******************
******Q*ILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEF*******************QPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPV************
MAAAPSQTILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKL***************************DARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLKV*********
****PSQTILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLKVKQPK*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAAAPSQTILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLKVKQPKEEYSP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query672 2.2.26 [Sep-21-2011]
Q43077674 Primary amine oxidase OS= N/A no 0.973 0.970 0.526 0.0
P49252667 Primary amine oxidase (Fr N/A no 0.973 0.980 0.523 0.0
Q8H1H9712 Primary amine oxidase OS= no no 0.936 0.883 0.477 1e-176
P46883757 Primary amine oxidase OS= N/A no 0.915 0.812 0.323 1e-89
P80695752 Primary amine oxidase OS= yes no 0.921 0.823 0.327 7e-88
P49250755 Primary amine oxidase OS= yes no 0.922 0.821 0.325 6e-86
Q07123648 Copper methylamine oxidas N/A no 0.904 0.938 0.292 1e-72
Q07121648 Primary amine oxidase OS= N/A no 0.904 0.938 0.292 1e-72
Q59118684 Histamine oxidase OS=Arth N/A no 0.912 0.896 0.290 2e-71
P46881638 Phenylethylamine oxidase N/A no 0.745 0.785 0.279 3e-56
>sp|Q43077|AMO_PEA Primary amine oxidase OS=Pisum sativum PE=1 SV=1 Back     alignment and function desciption
 Score =  763 bits (1971), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/661 (52%), Positives = 479/661 (72%), Gaps = 7/661 (1%)

Query: 8   TILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEP 67
           ++L ++  H      P H  HPLD LT  EF  +++IV   YP S+ ++L F Y+GL++P
Sbjct: 13  SVLTLLSFHAVVSVTPLHVQHPLDPLTKEEFLAVQTIVQNKYPISN-NRLAFHYIGLDDP 71

Query: 68  SKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFE 127
            K  V+ +  + T  + PR+ FV+A I+ QTHE++++L ++ I S  I++GYG+P+ + +
Sbjct: 72  EKDHVLRYETHPTLVSIPRKIFVVAIINSQTHEILINLRIRSIVSDNIHNGYGFPILSVD 131

Query: 128 DQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYM 187
           +Q  A KL   YPPF+ S+++RGL L E+VC SF++GW+G E+       R V++ C+  
Sbjct: 132 EQSLAIKLPLKYPPFIDSVKKRGLNLSEIVCSSFTMGWFGEEK-----NVRTVRLDCFMK 186

Query: 188 NGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAI 247
             TVN+++RPI GI++  DLD MKI+ + DR    VP A+ TE++ SK  PPF     ++
Sbjct: 187 ESTVNIYVRPITGITIVADLDLMKIVEYHDRDIEAVPTAENTEYQVSKQSPPFGPKQHSL 246

Query: 248 TVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSE 307
           T  QP GP F I+GH + WA+W+FH+ FDVRAG++ISLASIYDLEK +SRRVLYKG++SE
Sbjct: 247 TSHQPQGPGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISE 306

Query: 308 MFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIP 367
           +FVPY D TEE+  +TFFD+GE+G+GL +++L P RDCPP+A F+D Y    +G P  + 
Sbjct: 307 LFVPYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLK 366

Query: 368 KAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGS 427
            A C+FE+Y G+IMWRHTE  IP +++ E R +V+L+VRT+ T GNYD V DWEFK SGS
Sbjct: 367 NAICVFEQY-GNIMWRHTENGIPNESIEESRTEVNLIVRTIVTVGNYDNVIDWEFKASGS 425

Query: 428 IKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANS 487
           IK ++ L+G+++++GT   HKD ++ED++G LV+ NSI I+HDHF  Y LD D+DG  NS
Sbjct: 426 IKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNS 485

Query: 488 FVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNL 547
           F ++ L+T R+ D  S RKSYWT +++TAKTESDA+I +G  PAEL+ VNPN KT +GN 
Sbjct: 486 FEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNE 545

Query: 548 IGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAV 607
           +GYRLIP      LL+ DD+PQIR AFTNYNVWVTAYN++EKWAGGLY D S GDDTLAV
Sbjct: 546 VGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAV 605

Query: 608 WSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLKVKQPK 667
           W+ +NR I NKDIV+W+ +G HHVP QEDFP+MP L+  FELRP+NFFE NPVLK   P+
Sbjct: 606 WTKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTNFFERNPVLKTLSPR 665

Query: 668 E 668
           +
Sbjct: 666 D 666

Pisum sativum (taxid: 3888)
EC: 1EC: .EC: 4EC: .EC: 3EC: .EC: 2EC: 1
>sp|P49252|AMO_LENCU Primary amine oxidase (Fragment) OS=Lens culinaris PE=1 SV=3 Back     alignment and function description
>sp|Q8H1H9|AMO_ARATH Primary amine oxidase OS=Arabidopsis thaliana GN=At1g62810 PE=2 SV=1 Back     alignment and function description
>sp|P46883|AMO_ECOLI Primary amine oxidase OS=Escherichia coli (strain K12) GN=tynA PE=1 SV=1 Back     alignment and function description
>sp|P80695|AMO_KLEOK Primary amine oxidase OS=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) GN=maoA PE=1 SV=2 Back     alignment and function description
>sp|P49250|AMO_ENTAE Primary amine oxidase OS=Enterobacter aerogenes GN=maoA PE=1 SV=1 Back     alignment and function description
>sp|Q07123|AMO2_ARTS1 Copper methylamine oxidase OS=Arthrobacter sp. (strain P1) GN=maoII PE=1 SV=1 Back     alignment and function description
>sp|Q07121|AMO1_ARTS1 Primary amine oxidase OS=Arthrobacter sp. (strain P1) GN=maoI PE=1 SV=1 Back     alignment and function description
>sp|Q59118|AMOH_ARTGO Histamine oxidase OS=Arthrobacter globiformis PE=1 SV=3 Back     alignment and function description
>sp|P46881|PAOX_ARTGO Phenylethylamine oxidase OS=Arthrobacter globiformis PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query672
224108047673 predicted protein [Populus trichocarpa] 0.950 0.949 0.708 0.0
224102055668 predicted protein [Populus trichocarpa] 0.980 0.986 0.668 0.0
255551473689 Amine oxidase [copper-containing] precur 0.983 0.959 0.680 0.0
225432644676 PREDICTED: primary amine oxidase [Vitis 0.944 0.939 0.677 0.0
225432636674 PREDICTED: primary amine oxidase [Vitis 0.953 0.951 0.656 0.0
147832635 1265 hypothetical protein VITISV_040530 [Viti 0.944 0.501 0.662 0.0
449492626678 PREDICTED: LOW QUALITY PROTEIN: primary 0.973 0.964 0.618 0.0
225432632667 PREDICTED: primary amine oxidase [Vitis 0.944 0.952 0.639 0.0
449444246681 PREDICTED: primary amine oxidase-like [C 0.973 0.960 0.610 0.0
147794975644 hypothetical protein VITISV_029120 [Viti 0.909 0.948 0.624 0.0
>gi|224108047|ref|XP_002314703.1| predicted protein [Populus trichocarpa] gi|222863743|gb|EEF00874.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  976 bits (2523), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/645 (70%), Positives = 538/645 (83%), Gaps = 6/645 (0%)

Query: 23  PSHQ-YHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETT 81
           P+HQ  HPLDSLTP+EFS+IR+IV  +YP  S H   F YVGLE+P+K TV+SWLK+ TT
Sbjct: 21  PTHQRQHPLDSLTPAEFSKIRAIVHSSYPIPS-HTTAFHYVGLEDPNKLTVLSWLKDPTT 79

Query: 82  TNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPP 141
             PPRQAFVIARI+  THE+ VDL++ +I S ++Y GYGYP+ TFE+Q  A+ L   Y P
Sbjct: 80  KTPPRQAFVIARINQTTHEITVDLTINKIVSDKLYDGYGYPLLTFEEQIAANALPLKYAP 139

Query: 142 FVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGI 201
           F+ SIR+RGLK+EEVVC  F+VGWYG E    + KKRIV+VMCYY++GTVN +MRP+EG+
Sbjct: 140 FLESIRKRGLKIEEVVCGGFTVGWYGEE----RRKKRIVRVMCYYLDGTVNAYMRPVEGV 195

Query: 202 SMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDG 261
           ++TVDL+E KIIGF+DR+TVP+PK D T++R SK  PPF   LK IT+VQPDGPSFTIDG
Sbjct: 196 TVTVDLEETKIIGFKDRLTVPIPKGDGTDYRGSKQNPPFLAQLKGITMVQPDGPSFTIDG 255

Query: 262 HMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQR 321
           H IRWA+W+FHLSFD RAG IISLASI+DL+KQ+ R+VLYKG VSE+FVPYMDLTEEW  
Sbjct: 256 HRIRWANWDFHLSFDSRAGPIISLASIFDLQKQKFRQVLYKGFVSELFVPYMDLTEEWYY 315

Query: 322 RTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIM 381
           RTFFDAGEYGYGLC++ LEP RDCP NAVFMDAYF+ Q+GMP  +P  FCIFE+YAGDI 
Sbjct: 316 RTFFDAGEYGYGLCAVPLEPFRDCPENAVFMDAYFAGQNGMPVNMPDVFCIFEKYAGDIT 375

Query: 382 WRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVR 441
           WRHTE   PG+ +REVR +V+LVVR VST GNYDY+NDWEFKQSGSIKVTVGLTG+++VR
Sbjct: 376 WRHTETLKPGEEIREVRPEVTLVVRMVSTVGNYDYINDWEFKQSGSIKVTVGLTGLLEVR 435

Query: 442 GTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDR 501
           G+ YTH D ++E+VYGTL+AEN++  HHDHFLTY LDLDVDGDANS V+S L+ TRV D+
Sbjct: 436 GSVYTHNDQIKEEVYGTLLAENTVGAHHDHFLTYHLDLDVDGDANSLVKSNLQMTRVADQ 495

Query: 502 RSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGAL 561
            S RKSYW V S+TAKTESDARI+LG E A+LL VNPNK+T +GN IGYRLIP  +T  +
Sbjct: 496 MSPRKSYWRVVSETAKTESDARIRLGVEQADLLVVNPNKRTDLGNSIGYRLIPGSLTHPV 555

Query: 562 LSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIV 621
           LS DD+ QIR AFT YNVWVT YNKSEKWAGGLYADQS GDDTLA WS RNR IENKDIV
Sbjct: 556 LSDDDYSQIRGAFTKYNVWVTPYNKSEKWAGGLYADQSRGDDTLARWSLRNRGIENKDIV 615

Query: 622 LWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLKVKQP 666
           LWYTLGFHHVPYQEDFPVMPT++ GFELRP+NFFESNPVLKVK P
Sbjct: 616 LWYTLGFHHVPYQEDFPVMPTISSGFELRPANFFESNPVLKVKLP 660

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224102055|ref|XP_002312527.1| predicted protein [Populus trichocarpa] gi|222852347|gb|EEE89894.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255551473|ref|XP_002516782.1| Amine oxidase [copper-containing] precursor, putative [Ricinus communis] gi|223543870|gb|EEF45396.1| Amine oxidase [copper-containing] precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225432644|ref|XP_002278327.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737038|emb|CBI26239.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225432636|ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737034|emb|CBI26235.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147832635|emb|CAN68223.1| hypothetical protein VITISV_040530 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449492626|ref|XP_004159052.1| PREDICTED: LOW QUALITY PROTEIN: primary amine oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225432632|ref|XP_002278182.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737032|emb|CBI26233.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449444246|ref|XP_004139886.1| PREDICTED: primary amine oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|147794975|emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query672
TAIR|locus:2028636677 AT1G31690 [Arabidopsis thalian 0.940 0.933 0.577 2.4e-209
TAIR|locus:2028606681 AT1G31710 [Arabidopsis thalian 0.947 0.935 0.561 2.4e-209
UNIPROTKB|Q43077674 Q43077 "Primary amine oxidase" 0.950 0.948 0.538 8.4e-200
TAIR|locus:2028666741 AT1G31670 [Arabidopsis thalian 0.925 0.839 0.559 4.3e-196
TAIR|locus:2129520650 AO1 "amine oxidase 1" [Arabido 0.922 0.953 0.524 9.1e-187
TAIR|locus:2026267712 CuAO1 "COPPER AMINE OXIDASE1" 0.936 0.883 0.478 4.5e-162
TAIR|locus:2139069741 AT4G12290 [Arabidopsis thalian 0.943 0.855 0.471 9.3e-162
TAIR|locus:2080173687 AT3G43670 [Arabidopsis thalian 0.938 0.918 0.465 5.1e-161
UNIPROTKB|P46883757 tynA "TynA" [Escherichia coli 0.922 0.819 0.330 2.5e-88
TAIR|locus:2139054300 AT4G12280 [Arabidopsis thalian 0.410 0.92 0.533 4.1e-81
TAIR|locus:2028636 AT1G31690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2024 (717.5 bits), Expect = 2.4e-209, P = 2.4e-209
 Identities = 370/641 (57%), Positives = 474/641 (73%)

Query:    28 HPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKN--ETTTNPP 85
             HP D LT +E   +R+I+ K+YP    HK TFQYVGL EP K  V+SW  +       PP
Sbjct:    27 HPFDPLTETELKLVRNIINKSYPIGHNHKFTFQYVGLNEPEKSLVLSWHSSPDRNVKPPP 86

Query:    86 RQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVAS 145
             RQAFVIAR    + E+++D S + I S +I+ G G PM T ++Q+ A  +   Y PF  S
Sbjct:    87 RQAFVIARDKGMSREIVIDFSTRAIVSNKIHVGNGNPMLTIDEQQAATAVVQKYKPFCDS 146

Query:   146 IRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTV 205
             I +RGL L EVV  S ++GW+G    E K K R ++ + +Y+NG+VN ++RPIEG+++ V
Sbjct:   147 IIKRGLNLSEVVVTSSTMGWFG----ETKTK-RFIRTIPFYLNGSVNTYLRPIEGMTIIV 201

Query:   206 DLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGHMIR 265
             +LD+MK+ GF+DR T P+PKA+  E+R SK+KPPF  SL++  V QPDGP F IDGH++R
Sbjct:   202 NLDQMKVTGFKDRFTGPMPKANGREYRISKLKPPFGPSLRSAVVFQPDGPGFKIDGHVVR 261

Query:   266 WADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFF 325
             WA+WEFH+SFDVRAG++ISLASI+D++  + R+VLYKGH+SEMFVPYMD  ++W   ++ 
Sbjct:   262 WANWEFHMSFDVRAGLVISLASIFDMDMNRYRQVLYKGHLSEMFVPYMDPNDDWYFISYL 321

Query:   326 DAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHT 385
             D GE+G G  +++LEP  DCPPNA FMD  F  QDG P KI    CIFE+YAGDIMWRHT
Sbjct:   322 DCGEFGCGQTAVSLEPYTDCPPNAAFMDGIFPGQDGTPTKISNVMCIFEKYAGDIMWRHT 381

Query:   386 EATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTY 445
             EA +PG  + EVR DVSLV R V+T GNYDY+ ++EFK SGSIK+ VGLTG+++V+   Y
Sbjct:   382 EAEVPGLKITEVRPDVSLVARMVTTVGNYDYIIEYEFKPSGSIKMGVGLTGVLEVKPVEY 441

Query:   446 THKDHM-EEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRV-NDRRS 503
              H   + E+D+YGT+VA+N++ ++HDHF+T+RLDLD+DG  NSFVR++L T R      +
Sbjct:   442 VHTSEIKEDDIYGTIVADNTVGVNHDHFVTFRLDLDIDGTENSFVRTELVTKRTPKSVNT 501

Query:   504 SRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLS 563
              RKSYWT    TAKTE+DAR+KLG    EL+ VNP KKTK GN +GYRL+P   +  LL 
Sbjct:   502 PRKSYWTTKRNTAKTEADARVKLGLRAEELVVVNPTKKTKHGNEVGYRLLPGPASSPLLV 561

Query:   564 SDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLW 623
              DD+PQIRAAFTNYNVW+T YNKSE WA GLYAD+S GDDTLAVWS R+R IENKDIV+W
Sbjct:   562 QDDYPQIRAAFTNYNVWITPYNKSEVWASGLYADRSQGDDTLAVWSQRDREIENKDIVMW 621

Query:   624 YTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLKVK 664
             YT+GFHHVP QEDFP MPT+ GGFELRP+NFFE NPVLK K
Sbjct:   622 YTVGFHHVPCQEDFPTMPTMFGGFELRPTNFFEQNPVLKAK 662
GO:0005507 "copper ion binding" evidence=IEA;ISS
GO:0008131 "primary amine oxidase activity" evidence=IEA
GO:0009308 "amine metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0048038 "quinone binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2028606 AT1G31710 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q43077 Q43077 "Primary amine oxidase" [Pisum sativum (taxid:3888)] Back     alignment and assigned GO terms
TAIR|locus:2028666 AT1G31670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129520 AO1 "amine oxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2026267 CuAO1 "COPPER AMINE OXIDASE1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139069 AT4G12290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080173 AT3G43670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P46883 tynA "TynA" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TAIR|locus:2139054 AT4G12280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P49252AMO_LENCU1, ., 4, ., 3, ., 2, 10.52340.97320.9805N/Ano
P80695AMO_KLEOK1, ., 4, ., 3, ., 2, 10.32760.92110.8231yesno
P49250AMO_ENTAE1, ., 4, ., 3, ., 2, 10.32510.92260.8211yesno
Q43077AMO_PEA1, ., 4, ., 3, ., 2, 10.52640.97320.9703N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.4.3.210.946
3rd Layer1.4.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.X.5919.1
hypothetical protein (632 aa)
(Populus trichocarpa)
Predicted Functional Partners:
KNOX3
SubName- Full=KNOX3; Flags- Fragment; (369 aa)
      • 0.510
TUB2
tubulin, beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GT [...] (442 aa)
      • 0.507

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query672
PLN02566646 PLN02566, PLN02566, amine oxidase (copper-containi 0.0
pfam01179411 pfam01179, Cu_amine_oxid, Copper amine oxidase, en 0.0
PRK11504647 PRK11504, tynA, tyramine oxidase; Provisional 1e-168
COG3733654 COG3733, TynA, Cu2+-containing amine oxidase [Seco 1e-152
PRK14696721 PRK14696, tynA, tyramine oxidase; Provisional 1e-119
pfam02728101 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, 7e-24
pfam0272786 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, 2e-20
>gnl|CDD|215306 PLN02566, PLN02566, amine oxidase (copper-containing) Back     alignment and domain information 
 Score =  853 bits (2206), Expect = 0.0
 Identities = 370/659 (56%), Positives = 475/659 (72%), Gaps = 18/659 (2%)

Query: 8   TILFIILLHIFYIFVPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEP 67
            I  + L+ I      +  YHPLD L P E ++IR IV K++   +   LTF ++ LEEP
Sbjct: 2   NIPILALVFILQCCFVASLYHPLDPLNPQEINKIRLIVQKSH-LGNLPNLTFHFLDLEEP 60

Query: 68  SKQTVISWLK--NETTTNPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFT 125
            K+ V+ WL       + PPR+A V+ R   +T+ELIVDL+   I S R+Y+G+GYP  T
Sbjct: 61  EKRDVLKWLSSNPSNKSPPPRRAKVVVRAGGETYELIVDLATGSITSSRVYTGHGYPPLT 120

Query: 126 FEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCY 185
           F +   A KL   YP F  SI RRGL + EV C  F+VGWYG         KR +K+ C+
Sbjct: 121 FIELFQASKLPLKYPKFKKSILRRGLNISEVSCIPFTVGWYGET-----VTKRALKISCF 175

Query: 186 YMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLK 245
           Y  G+VN+F RPIEGIS+ +D+D M+II + DR   P+PKA+ T+FR       F     
Sbjct: 176 YRGGSVNVFARPIEGISILIDVDSMQIIKYSDRFRAPLPKAEGTDFRTKHKPFSF----- 230

Query: 246 AITVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHV 305
               V   G  FTI GH ++WA+W+FH+ FD RAG+ IS AS++D + ++ RRVLY+GHV
Sbjct: 231 -PCNVSDSG--FTILGHRVKWANWDFHVGFDARAGVTISTASVFDAKVKRFRRVLYRGHV 287

Query: 306 SEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRK 365
           SE FVPYMD T EW  RTF D GE+G+G  ++TL+PL DCP NAV++D Y +  DG  +K
Sbjct: 288 SETFVPYMDPTSEWYFRTFMDIGEFGFGRSAVTLQPLIDCPANAVYLDGYVAGADGQAQK 347

Query: 366 IPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQS 425
           +    CIFERY+GD+ +RHTE  +PG+ +R    ++SLVVR V+T GNYDY+ DWEFK+S
Sbjct: 348 MTNVICIFERYSGDVAFRHTEINVPGRVIRSGEPEISLVVRMVATLGNYDYILDWEFKKS 407

Query: 426 GSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDA 485
           GSIKV V LTG+++++ T+YT+ D + +DVYGTLVAEN+IA++HDHFLTY LDLDVDG+ 
Sbjct: 408 GSIKVGVDLTGVLEMKATSYTNNDQITKDVYGTLVAENTIAVNHDHFLTYYLDLDVDGNG 467

Query: 486 NSFVRSKLRTTRVN--DRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTK 543
           NSFV++KL+T RV   +  S RKSYWTV  +TAKTE++ RI+LGSEPAELL VNPNKKTK
Sbjct: 468 NSFVKAKLQTARVTAVNASSPRKSYWTVVKETAKTEAEGRIRLGSEPAELLIVNPNKKTK 527

Query: 544 MGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDD 603
           +GN +GYRLI      +LLS DD+PQIRAA+T Y VWVTAYNKSE+WAGG YAD+S GDD
Sbjct: 528 LGNQVGYRLITGQPVTSLLSDDDYPQIRAAYTKYQVWVTAYNKSERWAGGFYADRSRGDD 587

Query: 604 TLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLK 662
            LAVWS+RNR IENKDIVLWYT+GFHH+PYQEDFPVMPTL+GGFELRP+NFFESNP+L+
Sbjct: 588 GLAVWSSRNREIENKDIVLWYTVGFHHIPYQEDFPVMPTLHGGFELRPANFFESNPLLR 646

Length = 646
>gnl|CDD|216347 pfam01179, Cu_amine_oxid, Copper amine oxidase, enzyme domain Back     alignment and domain information
>gnl|CDD|236919 PRK11504, tynA, tyramine oxidase; Provisional Back     alignment and domain information
>gnl|CDD|226256 COG3733, TynA, Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|184793 PRK14696, tynA, tyramine oxidase; Provisional Back     alignment and domain information
>gnl|CDD|202361 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, N3 domain Back     alignment and domain information
>gnl|CDD|145726 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, N2 domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 672
PRK11504647 tynA tyramine oxidase; Provisional 100.0
PLN02566646 amine oxidase (copper-containing) 100.0
PRK14696721 tynA tyramine oxidase; Provisional 100.0
COG3733654 TynA Cu2+-containing amine oxidase [Secondary meta 100.0
KOG1186670 consensus Copper amine oxidase [Secondary metaboli 100.0
PF01179413 Cu_amine_oxid: Copper amine oxidase, enzyme domain 100.0
PF02728101 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; 99.87
PF0272786 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; 99.77
>PRK11504 tynA tyramine oxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=5.9e-188  Score=1576.28  Aligned_cols=623  Identities=34%  Similarity=0.598  Sum_probs=586.7

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCceEEEEEEccCCCHHHHHhhhhcCCCCCCCCEEEEEEEe--CCeeEEE
Q 005872           24 SHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARI--DHQTHEL  101 (672)
Q Consensus        24 ~~~~HPldpLt~~Ei~~a~~~v~~~~~~~~~~~~~f~~I~L~eP~K~~vl~~l~~~~~~~p~R~A~vvi~~--~~~~~E~  101 (672)
                      ....|||||||++||++|++|||++.+.  ...++|.+|+|.||+|++|++|+.++   +++|+|+|++++  ++.++|+
T Consensus        10 ~~~~HPLdpLt~~Ei~~a~~iv~~~~~~--~~~~~F~~i~L~EP~K~~v~~~~~g~---~~~R~a~v~~~~~~~~~~~e~   84 (647)
T PRK11504         10 AAVSHPLDPLTAAEIEAAVAILRAEGLL--GESTRFVSIELAEPPKAEVLAFDPGD---PIDRRAFVVLYDRATGKTYEA   84 (647)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHHHhcccc--CCceEEEEeeccCCCHHHHHhhhcCC---CCCcEEEEEEEECCCCcEEEE
Confidence            3456999999999999999999998763  25789999999999999999999875   247999999996  5679999


Q ss_pred             EEeCCCCeEEEEEeeCCCCCCCCCHHHHHHHHHHhhcCchHHHHHHHhCC-CCcceEEccccccccCCccccCCCCceEE
Q 005872          102 IVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGL-KLEEVVCESFSVGWYGAEEEEGKNKKRIV  180 (672)
Q Consensus       102 vV~l~~~~v~~~~~~~~~~~p~~~~ee~~~~e~~~~~~p~~~~a~~~~g~-~~~~v~~d~~~~G~~~~~~~~~~~~~R~~  180 (672)
                      +|||+.++|++++.++ ++||+++.||+.+||++|++||+|++||+|||| ++++|+||||++|||+.+++.   ++|++
T Consensus        85 vVdL~~~~V~~~~~~~-~~~p~~~~~e~~~~e~~~~~dp~~~~ai~~rgl~~~~~V~~dpw~~G~~~~~~~~---~~Rl~  160 (647)
T PRK11504         85 VVSLTAGEVVSWEEIP-GVQPPILLEEFEECEEVVRADPRWQAALAKRGITDFDLVMVDPWSAGYFGEPEER---GRRLA  160 (647)
T ss_pred             EEECCCCEEEEEEECC-CccCCcCHHHHHHHHHHHhcCHHHHHHHHHcCCCCcceEEEcCccccccCCCCcC---CceEE
Confidence            9999999999999987 569999999999999999999999999999999 579999999999998865433   68999


Q ss_pred             EEEEEEe-cCCCCCccCCcCCcEEEEecCccEEEEEeCCceeecCCCCCCCCccccCCCCCCCCCCCceeeCCCCCeEEE
Q 005872          181 KVMCYYM-NGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTI  259 (672)
Q Consensus       181 ~~~~f~~-~~~~n~ya~Pl~gl~~~vD~~~~kv~~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~lkp~~i~QPeG~sf~v  259 (672)
                      |++||+| ++++|+|||||+||+++||+++|||++|+|.+..|+|+.+ .+|.++.++ +.|+++||++|+||||+||+|
T Consensus       161 ~~~~~~r~~~~~n~Ya~Pi~G~~~vvDl~~~~vv~i~d~g~~p~p~~~-~~Y~~~~~~-~~r~dlkPl~i~QPeG~sF~v  238 (647)
T PRK11504        161 RGLAFVRADPGDNGYARPIEGLVAVVDLNTMEVLRVEDHGVVPIPAED-GNYDPEFIP-PLRTDLKPLEITQPEGPSFTV  238 (647)
T ss_pred             EEEEEEecCCCccccccccCceEEEEECCCCEEEEEecCCCCCCCCCC-CCCChhHcc-ccccCCCCcceeCCCCCcEEE
Confidence            9999999 5899999999999999999999999999998877777765 599988764 679999999999999999999


Q ss_pred             eceEEeeeceEEEEeeeCCCceeEEeeEEeccCCCceeEEEEeeeeeeEEeecCCCCccccccceeecCCCCCCcCccCC
Q 005872          260 DGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTL  339 (672)
Q Consensus       260 ~g~~V~w~~W~f~~~f~~reGlvL~~v~~~D~r~~~~r~v~yrlsl~Em~VpY~dp~~~~~~k~~fD~ge~G~G~~a~~L  339 (672)
                      +|++|+||||+||+|||+|||||||||+|+|  .|++|||+||+|||||+||||||+++|++|+|||+||||+|.+||+|
T Consensus       239 ~g~~V~W~~W~f~vgf~~reGlvL~dv~y~d--~g~~R~v~YrlslsEm~VPYgdp~p~~~~k~~fD~GeyG~G~~an~L  316 (647)
T PRK11504        239 DGNEVEWQKWSFRVGFNPREGLVLHQVSYDD--GGRERPILYRASLSEMVVPYGDPSPTHYWKNAFDAGEYGLGRLANSL  316 (647)
T ss_pred             cCCEEEECCcEEEEecCCCCceEEEEEEEcC--CCCcceEEEEeeeeeeeeecCCCCcchhhceeeeccccCCccccccc
Confidence            9999999999999999999999999999998  67889999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcEEeeeEEecCCCCeeeeCceEEEEEecCCCceeeecccCCCCeeEeeeeeceEEEEEEeEeecccceEEE
Q 005872          340 EPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVND  419 (672)
Q Consensus       340 ~~G~DCpg~a~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYdYi~~  419 (672)
                      ++||||||+|+|||+++++++|+|++++|||||||+| +|+||||++++++..+++|+|   +||||+|+|||||||||+
T Consensus       317 ~lGcDCpg~i~Y~D~~~~~~~G~p~~~~naICihE~D-~GilwkHt~~r~~~~~v~r~r---~LVvr~I~TVgNYdYi~~  392 (647)
T PRK11504        317 ELGCDCLGEIRYFDAVLADSDGEPYTIKNAICMHEED-YGILWKHTDFRTGSAEVRRSR---RLVISFFATVGNYDYGFY  392 (647)
T ss_pred             ccCCCCCCCCEEcceEEecCCCCeEEecCEEEEeeec-CCeeeeeeccCCCcEEEEecc---EEEEEEEEecccccEEEE
Confidence            9999999999999999999999999999999999999 889999999998766655555   999999999999999999


Q ss_pred             EEEeeCccEEEEEeEeeeeeeeeeeeccCCCCccccccceeccCccccccceeEEeeeecCCCCCCCceEEEEEEEeecC
Q 005872          420 WEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVN  499 (672)
Q Consensus       420 w~F~~dG~Ie~~v~aTGil~~~~~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~  499 (672)
                      |+|||||+||++|+|||||++++..     ++++.+|||+|+|+++|++|||+|||||||||||.+|||+++|+++++..
T Consensus       393 w~F~qdG~Ie~eV~aTGil~t~~~~-----~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIDG~~Nsv~~~d~~~~p~~  467 (647)
T PRK11504        393 WYFYQDGTIEFEVKLTGIVFTAAVP-----PGETPPYGTLVAPGLYAPNHQHFFNARLDMDVDGPGNSVYEVNSVPVPMG  467 (647)
T ss_pred             EEEecCceEEEEEEeeeEEEeeeeC-----CCccCCCcceecCCcccccceEEEEEEEcccccCCCceEEEEEeEecCCC
Confidence            9999999999999999999986541     22346899999999999999999999999999999999999999999886


Q ss_pred             CCCCCcceeEEEEEEeecChhhhhhhcCC-CCcEEEEecCCCCCCCCCceeEEEeeCCccccCCCCCChhhhccccccce
Q 005872          500 DRRSSRKSYWTVDSKTAKTESDARIKLGS-EPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYN  578 (672)
Q Consensus       500 ~~~~p~~~~~~~~~~~~~te~~a~~~~~~-~~r~~~i~N~~~~n~~G~p~gY~l~p~~~~~~~~~~~s~~~~ra~fa~~~  578 (672)
                       ++||++++|+++++++++|++|++++++ ++|+|+|+|++++|++|+|+||||+|+++++++++++|+..+||+||+|+
T Consensus       468 -~~np~g~~~~~~~t~l~tE~~a~~~~~~~~~R~~~ivN~~~~N~~G~pvgYkl~p~~~~~~l~~~~s~~~~ra~fa~~~  546 (647)
T PRK11504        468 -PDNPHGNAFYTRETLLETESEAARDADPSTGRYWKIVNPNKKNRLGEPVAYKLVPGGNPPLLADPGSSIRQRAGFATHH  546 (647)
T ss_pred             -CCCccceEEEEEEEEecchhhhhhccCCCCccEEEEECCCCcCCCCCeeeEEEccCCCccccCCCCchhhhcchhhhCc
Confidence             6899999999999999999999999999 99999999999999999999999999999999999999999999999999


Q ss_pred             EEEeeeCCCCCCCCCcCccCCCCCCChhhhccCCCceecCCeEEEEEeCcccCCCCCCCCccccceeeeEEEeCCCCCCC
Q 005872          579 VWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESN  658 (672)
Q Consensus       579 lwVT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~~f~L~P~nFFd~n  658 (672)
                      ||||+|+|+|+||+|+|++|+.+++||+.|+++||+|+|+|||+|||||+||+||+|||||||++++||+|||+|||++|
T Consensus       547 lwVT~y~d~E~~aag~y~~Qs~~~~gl~~~~~~~~~i~~~DiVlW~t~G~~HvPr~ED~PvMP~~~~gf~L~P~nFF~~N  626 (647)
T PRK11504        547 LWVTPYDPDERYAAGDYPNQSAGGDGLPAYIAADRSIENTDVVLWYTFGITHVPRPEDWPVMPVDYAGFKLKPVGFFDRN  626 (647)
T ss_pred             EEEeccCCCccccCCCCcccCCCCCCHHHHhcCCCccccCceEEEEecCcccCCChhhCCCCccceEEEEEEcCCCCCCC
Confidence            99999999999999999999999899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCC
Q 005872          659 PVLKVKQPKEE  669 (672)
Q Consensus       659 P~ldvp~~~~~  669 (672)
                      |+||+|++++.
T Consensus       627 Paldvp~s~~~  637 (647)
T PRK11504        627 PALDLPPEPPA  637 (647)
T ss_pred             ccccCCCcccc
Confidence            99999999864

>PLN02566 amine oxidase (copper-containing) Back     alignment and domain information
>PRK14696 tynA tyramine oxidase; Provisional Back     alignment and domain information
>COG3733 TynA Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG1186 consensus Copper amine oxidase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF01179 Cu_amine_oxid: Copper amine oxidase, enzyme domain; InterPro: IPR015798 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02728 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; InterPro: IPR015802 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02727 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; InterPro: IPR015800 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query672
1w2z_A649 Psao And Xenon Length = 649 0.0
1ksi_A642 Crystal Structure Of A Eukaryotic (Pea Seedling) Co 0.0
2wgq_A727 Zinc Substituted E Coli Copper Amine Oxidase, A Mod 5e-91
1oac_A727 Crystal Structure Of A Quinoenzyme: Copper Amine Ox 4e-90
1jrq_A727 X-Ray Structure Analysis Of The Role Of The Conserv 1e-89
1qal_A721 The Active Site Base Controls Cofactor Reactivity I 2e-89
1qaf_A721 The Active Site Base Controls Cofactor Reactivity I 2e-89
1qak_A722 The Active Site Base Controls Cofactor Reactivity I 4e-89
3loy_A633 Crystal Structure Of A Copper-Containing Benzylamin 2e-58
1ivu_A638 Crystal Structure Of Copper Amine Oxidase From Arth 2e-57
1ekm_A656 Crystal Structure At 2.5 A Resolution Of Zinc-Subst 5e-57
1sih_A646 Agao In Covalent Complex With The Inhibitor Moba (" 1e-56
1ivv_A638 Crystal Structure Of Copper Amine Oxidase From Arth 1e-56
2e2u_A628 Substrate Schiff-Base Analogue Of Copper Amine Oxid 2e-56
1ui7_A638 Site-Directed Mutagenesis Of His433 Involved In Bin 2e-56
3sx1_A692 Hansenula Polymorpha Copper Amine Oxidase-1 In Its 2e-56
1a2v_A655 Copper Amine Oxidase From Hansenula Polymorpha Leng 4e-56
2yx9_A638 Crystal Structure Of D298k Copper Amine Oxidase Fro 7e-56
2cwt_A638 Catalytic Base Deletion In Copper Amine Oxidase Fro 1e-55
1ui8_A638 Site-directed Mutagenesis Of His592 Involved In Bin 1e-55
3n9h_A692 Crystal Structural Of Mutant Y305a In The Copper Am 2e-54
2oov_C660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 6e-54
2oov_A660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 3e-53
3nbj_B657 Crystal Structure Of Y305f Mutant Of The Copper Ami 7e-53
3nbb_B663 Crystal Structure Of Mutant Y305f Expressed In E. C 7e-53
3hi7_A731 Crystal Structure Of Human Diamine Oxidase Length = 3e-39
1tu5_A746 Crystal Structure Of Bovine Plasma Copper-Containin 7e-32
3pgb_A797 Crystal Structure Of Aspergillus Nidulans Amine Oxi 1e-30
1us1_A763 Crystal Structure Of Human Vascular Adhesion Protei 3e-30
3ala_A748 Crystal Structure Of Vascular Adhesion Protein-1 In 3e-30
2c10_A735 The Structure Of A Truncated, Soluble Version Of Se 4e-30
1n9e_A787 Crystal Structure Of Pichia Pastoris Lysyl Oxidase 2e-24
1rky_A747 Pplo + Xe Length = 747 2e-24
>pdb|1W2Z|A Chain A, Psao And Xenon Length = 649 Back     alignment and structure 
Iteration: 1

 Score =  757 bits (1954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/646 (53%), Positives = 471/646 (72%), Gaps = 7/646 (1%)
Query: 23  PSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTT 82
           P H  HPLD LT  EF  +++IV   YP  S ++L F Y+GL++P K  V+ +  + T  
Sbjct: 3   PLHVQHPLDPLTKEEFLAVQTIVQNKYP-ISNNRLAFHYIGLDDPEKDHVLRYETHPTLV 61
Query: 83  NPPRQAFVIARIDHQTHELIVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPF 142
           + PR+ FV+A I+ QTHE++++L ++ I S  I++GYG+P+ + ++Q  A KL   YPPF
Sbjct: 62  SIPRKIFVVAIINSQTHEILINLRIRSIVSDNIHNGYGFPILSVDEQSLAIKLPLKYPPF 121
Query: 143 VASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGIS 202
           + S+++RGL L E+VC SF++GW+G E+       R V++ C+    TVN+++RPI GI+
Sbjct: 122 IDSVKKRGLNLSEIVCSSFTMGWFGEEK-----NVRTVRLDCFMKESTVNIYVRPITGIT 176
Query: 203 MTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGH 262
           +  DLD MKI+ + DR    VP A+ TE++ SK  PPF     ++T  QP GP F I+GH
Sbjct: 177 IVADLDLMKIVEYHDRDIEAVPTAENTEYQVSKQSPPFGPKQHSLTSHQPQGPGFQINGH 236
Query: 263 MIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRR 322
            + WA+W+FH+ FDVRAG++ISLASIYDLEK +SRRVLYKG++SE+FVPY D TEE+  +
Sbjct: 237 SVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDPTEEFYFK 296
Query: 323 TFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMW 382
           TFFD+GE+G+GL +++L P RDCPP+A F+D Y    +G P  +  A C+FE+Y G+IMW
Sbjct: 297 TFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQY-GNIMW 355
Query: 383 RHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRG 442
           RHTE  IP +++ E R +V+L+VRT+ T GN D V DWEFK SGSIK ++ L+G+++++G
Sbjct: 356 RHTENGIPNESIEESRTEVNLIVRTIVTVGNXDNVIDWEFKASGSIKPSIALSGILEIKG 415
Query: 443 TTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRR 502
           T   HKD ++ED++G LV+ NSI I+HDHF  Y LD D+DG  NSF ++ L+T R+ D  
Sbjct: 416 TNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFEKTSLKTVRIKDGS 475
Query: 503 SSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALL 562
           S RKSYWT +++TAKTESDA+I +G  PAEL+ VNPN KT +GN +GYRLIP      LL
Sbjct: 476 SKRKSYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLL 535
Query: 563 SSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVL 622
           + DD+PQIR AFTNYNVWVTAYN++EKWAGGLY D S GDDTLAVW+ +NR I NKDIV+
Sbjct: 536 TEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVM 595
Query: 623 WYTLGFHHVPYQEDFPVMPTLNGGFELRPSNFFESNPVLKVKQPKE 668
           W+ +G HHVP QEDFP+MP L+  FELRP+NFFE NPVLK   P++
Sbjct: 596 WHVVGIHHVPAQEDFPIMPLLSTSFELRPTNFFERNPVLKTLSPRD 641
>pdb|1KSI|A Chain A, Crystal Structure Of A Eukaryotic (Pea Seedling) Copper-Containing Amine Oxidase At 2.2a Resolution Length = 642 Back     alignment and structure
>pdb|2WGQ|A Chain A, Zinc Substituted E Coli Copper Amine Oxidase, A Model For The Precursor For 2,4,5-Trihydroxyphenylalaninequinone Formation Length = 727 Back     alignment and structure
>pdb|1OAC|A Chain A, Crystal Structure Of A Quinoenzyme: Copper Amine Oxidase Of Escherichia Coli At 2 Angstroems Resolution Length = 727 Back     alignment and structure
>pdb|1JRQ|A Chain A, X-Ray Structure Analysis Of The Role Of The Conserved Tyrosine-369 In Active Site Of E. Coli Amine Oxidase Length = 727 Back     alignment and structure
>pdb|1QAL|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1QAF|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1QAK|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-ray Crystallographic Studies With Mutational Variants Length = 722 Back     alignment and structure
>pdb|3LOY|A Chain A, Crystal Structure Of A Copper-Containing Benzylamine Oxidase From Hansenula Polymorpha Length = 633 Back     alignment and structure
>pdb|1IVU|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Initial Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure
>pdb|1EKM|A Chain A, Crystal Structure At 2.5 A Resolution Of Zinc-Substituted Copper Amine Oxidase Of Hansenula Polymorpha Expressed In Escherichia Coli Length = 656 Back     alignment and structure
>pdb|1SIH|A Chain A, Agao In Covalent Complex With The Inhibitor Moba ("4-(4- Methylphenoxy)-2-Butyn-1-Amine") Length = 646 Back     alignment and structure
>pdb|1IVV|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Early Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure
>pdb|2E2U|A Chain A, Substrate Schiff-Base Analogue Of Copper Amine Oxidase From Arthrobacter Globiformis Formed With 4-Hydroxybenzylhydrazine Length = 628 Back     alignment and structure
>pdb|1UI7|A Chain A, Site-Directed Mutagenesis Of His433 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|3SX1|A Chain A, Hansenula Polymorpha Copper Amine Oxidase-1 In Its Apo Form Length = 692 Back     alignment and structure
>pdb|1A2V|A Chain A, Copper Amine Oxidase From Hansenula Polymorpha Length = 655 Back     alignment and structure
>pdb|2YX9|A Chain A, Crystal Structure Of D298k Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|2CWT|A Chain A, Catalytic Base Deletion In Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|1UI8|A Chain A, Site-directed Mutagenesis Of His592 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|3N9H|A Chain A, Crystal Structural Of Mutant Y305a In The Copper Amine Oxidase From Hansenula Polymorpha Length = 692 Back     alignment and structure
>pdb|2OOV|C Chain C, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|2OOV|A Chain A, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|3HI7|A Chain A, Crystal Structure Of Human Diamine Oxidase Length = 731 Back     alignment and structure
>pdb|1TU5|A Chain A, Crystal Structure Of Bovine Plasma Copper-Containing Amine Oxidase Length = 746 Back     alignment and structure
>pdb|3PGB|A Chain A, Crystal Structure Of Aspergillus Nidulans Amine Oxidase Length = 797 Back     alignment and structure
>pdb|1US1|A Chain A, Crystal Structure Of Human Vascular Adhesion Protein-1 Length = 763 Back     alignment and structure
>pdb|3ALA|A Chain A, Crystal Structure Of Vascular Adhesion Protein-1 In Space Group C2 Length = 748 Back     alignment and structure
>pdb|2C10|A Chain A, The Structure Of A Truncated, Soluble Version Of Semicarbazide-Sensitive Amine Oxidase Length = 735 Back     alignment and structure
>pdb|1N9E|A Chain A, Crystal Structure Of Pichia Pastoris Lysyl Oxidase Pplo Length = 787 Back     alignment and structure
>pdb|1RKY|A Chain A, Pplo + Xe Length = 747 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query672
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 0.0
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 0.0
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 0.0
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 1e-171
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 1e-171
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 1e-151
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 1e-148
1w7c_A747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 1e-146
3pgb_A797 Putative uncharacterized protein; oxidoreductase, 1e-144
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Length = 727 Back     alignment and structure
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Length = 692 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query672
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 100.0
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 100.0
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 100.0
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 100.0
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 100.0
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 100.0
1w7c_A747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 100.0
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 100.0
3pgb_A797 Putative uncharacterized protein; oxidoreductase, 100.0
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Back     alignment and structure
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 672
d1w2za1441 b.30.2.1 (A:207-647) Copper amine oxidase, domain 0.0
d2oqea1436 b.30.2.1 (A:237-672) Copper amine oxidase, domain 1e-158
d1w6ga1417 b.30.2.1 (A:212-628) Copper amine oxidase, domain 1e-157
d1d6za1424 b.30.2.1 (A:301-724) Copper amine oxidase, domain 1e-156
d1w7ca1460 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 1e-142
d1w2za3108 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1e-40
d1d6za3115 d.17.2.1 (A:186-300) Copper amine oxidase, domains 7e-32
d1w2za293 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 1e-30
d1w6ga3115 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1e-28
d1d6za295 d.17.2.1 (A:91-185) Copper amine oxidase, domains 6e-25
d2oqea3121 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1e-22
d2oqea298 d.17.2.1 (A:18-115) Copper amine oxidase, domains 2e-20
d1w6ga288 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 7e-18
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 441 Back     information, alignment and structure

class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Pea seedling (Pisum sativum) [TaxId: 3888]

 Score =  519 bits (1337), Expect = 0.0
 Identities = 257/435 (59%), Positives = 332/435 (76%), Gaps = 1/435 (0%)

Query: 234 SKIKPPFRQSLKAITVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEK 293
           SK  PPF     ++T  QP GP F I+GH + WA+W+FH+ FDVRAG++ISLASIYDLEK
Sbjct: 2   SKQSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLEK 61

Query: 294 QQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMD 353
            +SRRVLYKG++SE+FVPY D TEE+  +TFFD+GE+G+GL +++L P RDCPP+A F+D
Sbjct: 62  HKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFID 121

Query: 354 AYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGN 413
            Y    +G P  +  A C+FE+Y   IMWRHTE  IP +++ E R +V+L+VRT+ T GN
Sbjct: 122 TYVHSANGTPILLKNAICVFEQYGN-IMWRHTENGIPNESIEESRTEVNLIVRTIVTVGN 180

Query: 414 YDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFL 473
           YD V DWEFK SGSIK ++ L+G+++++GT   HKD ++ED++G LV+ NSI I+HDHF 
Sbjct: 181 YDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFY 240

Query: 474 TYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAEL 533
            Y LD D+DG  NSF ++ L+T R+ D  S RKSYWT +++TAKTESDA+I +G  PAEL
Sbjct: 241 IYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGLAPAEL 300

Query: 534 LFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGG 593
           + VNPN KT +GN +GYRLIP      LL+ DD+PQIR AFTNYNVWVTAYN++EKWAGG
Sbjct: 301 VVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGG 360

Query: 594 LYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQEDFPVMPTLNGGFELRPSN 653
           LY D S GDDTLAVW+ +NR I NKDIV+W+ +G HHVP QEDFP+MP L+  FELRP+N
Sbjct: 361 LYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTN 420

Query: 654 FFESNPVLKVKQPKE 668
           FFE NPVLK   P++
Sbjct: 421 FFERNPVLKTLSPRD 435
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 436 Back     information, alignment and structure
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Length = 417 Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Length = 424 Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Length = 460 Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 108 Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 93 Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 115 Back     information, alignment and structure
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 95 Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 121 Back     information, alignment and structure
>d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 98 Back     information, alignment and structure
>d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 88 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query672
d1w2za1441 Copper amine oxidase, domain 3 {Pea seedling (Pisu 100.0
d1w6ga1417 Copper amine oxidase, domain 3 {Arthrobacter globi 100.0
d2oqea1436 Copper amine oxidase, domain 3 {Yeast (Hansenula p 100.0
d1d6za1424 Copper amine oxidase, domain 3 {Escherichia coli [ 100.0
d1w7ca1460 Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastor 100.0
d1w2za3108 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.95
d1w6ga3115 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.94
d1d6za3115 Copper amine oxidase, domains 1 and 2 {Escherichia 99.94
d2oqea3121 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.92
d2oqea298 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.87
d1w2za293 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.87
d1d6za295 Copper amine oxidase, domains 1 and 2 {Escherichia 99.86
d1w6ga288 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.74
d1w7ca2127 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 99.35
d1w7ca3146 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 93.11
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Pea seedling (Pisum sativum) [TaxId: 3888]

Probab=100.00  E-value=3.4e-143  Score=1176.24  Aligned_cols=434  Identities=59%  Similarity=1.073  Sum_probs=412.3

Q ss_pred             CCCCCCCCCCCceeeCCCCCeEEEeceEEeeeceEEEEeeeCCCceeEEeeEEeccCCCceeEEEEeeeeeeEEeecCCC
Q 005872          236 IKPPFRQSLKAITVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDL  315 (672)
Q Consensus       236 ~~~~~r~~lkp~~i~QPeG~sf~v~g~~V~w~~W~f~~~f~~reGlvL~~v~~~D~r~~~~r~v~yrlsl~Em~VpY~dp  315 (672)
                      +++++|+++|||+|+||||+||+|+|++|+||+|+||++||+|||||||||+|+|+..+++|||+||+|||||+|||+||
T Consensus         4 ~~p~~~~~~kp~~i~QPeG~sf~v~g~~V~W~~W~f~v~f~~r~GlvL~~v~~~D~~~~~gr~I~yrlsl~Em~vpY~dp   83 (441)
T d1w2za1           4 QSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDP   83 (441)
T ss_dssp             CCSCCCCCCCCCEEECTTCCSEEEETTEEEETTEEEEEEEETTTEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEBCCC
T ss_pred             cCCCCCCCCCCceeECCCCCCEEEeCCEEEeCCCEEEEEecCCCcceEEeeEEeeccCCCceEEEEEeeeeeeEEeCCCC
Confidence            45677999999999999999999999999999999999999999999999999998558899999999999999999999


Q ss_pred             CccccccceeecCCCCCCcCccCCCCCCCCCCCcEEeeeEEecCCCCeeeeCceEEEEEecCCCceeeecccCCCCeeEe
Q 005872          316 TEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVR  395 (672)
Q Consensus       316 ~~~~~~k~~fD~ge~G~G~~a~~L~~G~DCpg~a~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~~~~  395 (672)
                      +++|++|+|||+||||+|.+|++|++|||||++|+|||+++++++|+|++++|||||||+| +|++|||++++.++..+.
T Consensus        84 ~~~~~~k~~~D~g~yG~G~~a~~L~~G~DCpg~a~y~d~~~~~~~g~p~~~~naiCifE~d-~G~~~kH~~~~~~~~~~~  162 (441)
T d1w2za1          84 TEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQY-GNIMWRHTENGIPNESIE  162 (441)
T ss_dssp             STTTTTCEECHHHHHCTTTTBCCCCTTTTSCTTCEEEEEEEECTTSCEEEEEEEEEEEEEC-CCEEEEEEECCSTTCCEE
T ss_pred             CchhhhceeEcccCccccccccccccCCCCCCCCEEcceEEECCCCCEEeccCeEEEEecc-CCceeeeecccCCCcceE
Confidence            9999999999999999999999999999999999999999999999999999999999999 889999999998888888


Q ss_pred             eeeeceEEEEEEeEeecccceEEEEEEeeCccEEEEEeEeeeeeeeeeeeccCCCCccccccceeccCccccccceeEEe
Q 005872          396 EVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTY  475 (672)
Q Consensus       396 ~~r~~~~LVvr~i~TVgNYdYi~~w~F~~dG~Ie~~v~aTGil~~~~~~~~~~~~~~~~~yGt~V~~~~~a~~HqH~f~~  475 (672)
                      ++|++++||||+|+|||||||||+|+|||||+||++|+|||||+++++.....++.+...||++|+|+++|++|||+|||
T Consensus       163 ~~r~~~~LVvr~i~TVgNYdYi~~~~F~~dGtIe~eV~aTGil~~~~~~~~~~~~~~~~~yGt~v~p~v~g~~HqH~f~~  242 (441)
T d1w2za1         163 ESRTEVNLIVRTIVTVGNYDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIY  242 (441)
T ss_dssp             EEEECCEEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCEEECSCCSGGGCCSCCSEEEEETTEEEECEEEEEEE
T ss_pred             eeecceeEEEEEEEEecceeEEEEEEEecCceEEEEEEeeeEEEEeeecccccCccccCCcceeeccCccccceeeEEEE
Confidence            89999999999999999999999999999999999999999999876533222223456799999999999999999999


Q ss_pred             eeecCCCCCCCceEEEEEEEeecCCCCCCcceeEEEEEEeecChhhhhhhcCCCCcEEEEecCCCCCCCCCceeEEEeeC
Q 005872          476 RLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPE  555 (672)
Q Consensus       476 RlD~dIdG~~Nsv~~~d~~~~~~~~~~~p~~~~~~~~~~~~~te~~a~~~~~~~~r~~~i~N~~~~n~~G~p~gY~l~p~  555 (672)
                      ||||||||.+|||+++|+++++++.+++|++..++++++++++|++|++.++.++|+|+|+|++++|++|+|+||||+|+
T Consensus       243 RlD~dIdG~~Nsv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~a~~~~~~~~~~~~v~N~~~~N~~G~p~gYkL~p~  322 (441)
T d1w2za1         243 YLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPA  322 (441)
T ss_dssp             EEEECTTSSCBEEEEEEEEEEECCSSSCSCSEEEEEEEEECCBGGGGCBCTTSSCEEEEEEEEEEECTTSCEEEEEEECC
T ss_pred             EEecccCCCCCceEEEEeEeccCCCCCCCCcceEEEEEEEeechhhhhhccCcCcceEEEeCCCccCcCCCceeEEEccC
Confidence            99999999999999999999998777778877788999999999999888877889999999999999999999999999


Q ss_pred             CccccCCCCCChhhhccccccceEEEeeeCCCCCCCCCcCccCCCCCCChhhhccCCCceecCCeEEEEEeCcccCCCCC
Q 005872          556 GVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNRNRSIENKDIVLWYTLGFHHVPYQE  635 (672)
Q Consensus       556 ~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~E  635 (672)
                      +++++++.++|+..+||+||+|+||||||+|+|+||+|+|++|+.++++|+.|+++||+|+|||||+|+|||+||+||+|
T Consensus       323 ~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~y~~q~~~~~gl~~~~~~~~~i~~~DiV~W~t~G~~H~Pr~E  402 (441)
T d1w2za1         323 IPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQE  402 (441)
T ss_dssp             SCCCCCSCTTSHHHHHTGGGGCSEEEEECCTTCCCTTCSCCBTCCSTTSHHHHGGGCCBCSSBCEEEEEEEEEEECCCGG
T ss_pred             CCCcccCCCCchhhhhhhhhhCcEEEecCCccccCcCCCCcccCCCCCCccchhcCCCcccCCCEEEEEeCCcccCCChh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCccccceeeeEEEeCCCCCCCCCCCCCCCCCCC
Q 005872          636 DFPVMPTLNGGFELRPSNFFESNPVLKVKQPKEEY  670 (672)
Q Consensus       636 D~Pvmp~~~~~f~L~P~nFFd~nP~ldvp~~~~~~  670 (672)
                      ||||||++++||+|||+|||++||+||+|++++.-
T Consensus       403 D~Pvmp~~~~gf~L~P~nFF~~nPald~~~~~~~~  437 (441)
T d1w2za1         403 DFPIMPLLSTSFELRPTNFFERNPVLKTLSPRDVA  437 (441)
T ss_dssp             GSSSCCCEEEECEEEEESSSSSCTTTTCCCCCCCC
T ss_pred             hcCCcceeeeeEEEECCCCCCCCCccCCCCccccc
Confidence            99999999999999999999999999999998753
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1w7ca2 d.17.2.1 (A:43-169) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w7ca3 d.17.2.1 (A:170-315) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure